prot_D-herbacea_F_contig1062.647.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1062.647.1
Unique Nameprot_D-herbacea_F_contig1062.647.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length54
Homology
BLAST of mRNA_D-herbacea_F_contig1062.647.1 vs. uniprot
Match: A0A1E7F0G0_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F0G0_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 4.630e-20
Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 0
Query:    1 SGVNRHSDKHAPRNIPEAQDAFKILMIHWILQVARRIAFRCVLHRCGSQDIRR 53
            SG++RHSDKHA   IP+AQ AFKILMIH +LQ A RIAFRCVLHRCG+ DI R
Sbjct:    2 SGIHRHSDKHATGKIPKAQCAFKILMIHEVLQFALRIAFRCVLHRCGNLDIHR 54          
BLAST of mRNA_D-herbacea_F_contig1062.647.1 vs. uniprot
Match: A0A524MI88_9PROT (Uncharacterized protein n=1 Tax=Nitrosomonadales bacterium TaxID=2026761 RepID=A0A524MI88_9PROT)

HSP 1 Score: 79.7 bits (195), Expect = 5.980e-18
Identity = 38/53 (71.70%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    1 SGVNRHSDKHAPRNIPEAQDAFKILMIHWILQVARRIAFRCVLHRCGSQDIRR 53
            SGV+ HS +HA  +IPEAQ AFKILMIH +LQ A RIAFRCVLHRCG+ DI R
Sbjct:   67 SGVHEHSTRHATGHIPEAQCAFKILMIHEVLQFALRIAFRCVLHRCGNLDIHR 119          
BLAST of mRNA_D-herbacea_F_contig1062.647.1 vs. uniprot
Match: B8CEF4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CEF4_THAPS)

HSP 1 Score: 76.6 bits (187), Expect = 3.440e-17
Identity = 37/51 (72.55%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    1 SGVNRHSDKHAPRNIPEAQDAFKILMIHWILQVARRIAFRCVLHRCGSQDI 51
            SGV+ HSDKHA  + P+AQ AFK LMIH +LQ A RIAFRCVLHRCG QDI
Sbjct:   27 SGVSGHSDKHALGHYPKAQCAFKSLMIHEVLQFALRIAFRCVLHRCGIQDI 77          
BLAST of mRNA_D-herbacea_F_contig1062.647.1 vs. uniprot
Match: K0S3C5_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S3C5_THAOC)

HSP 1 Score: 76.3 bits (186), Expect = 4.060e-17
Identity = 37/51 (72.55%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    1 SGVNRHSDKHAPRNIPEAQDAFKILMIHWILQVARRIAFRCVLHRCGSQDI 51
            SGV  HSDKHA  N P+AQ AFKILMIH +LQ   RIA RCVLHRCG QDI
Sbjct:   20 SGVQGHSDKHALGNYPKAQCAFKILMIHEVLQFVLRIAVRCVLHRCGIQDI 70          
BLAST of mRNA_D-herbacea_F_contig1062.647.1 vs. uniprot
Match: A9U5J8_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9U5J8_PHYPA)

HSP 1 Score: 57.8 bits (138), Expect = 1.230e-8
Identity = 29/41 (70.73%), Postives = 30/41 (73.17%), Query Frame = 0
Query:   12 PRNIPEAQDAFKILMIHWILQVARRIAFRCVLHRCGSQDIR 52
            P + P AQ AFK  MIH ILQ   RIAFRCVLHRC SQDIR
Sbjct:  179 PSDEPRAQLAFKNSMIHGILQFTLRIAFRCVLHRCKSQDIR 219          
BLAST of mRNA_D-herbacea_F_contig1062.647.1 vs. uniprot
Match: D8UMG8_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UMG8_VOLCA)

HSP 1 Score: 51.6 bits (122), Expect = 2.280e-7
Identity = 26/37 (70.27%), Postives = 27/37 (72.97%), Query Frame = 0
Query:   16 PEAQDAFKILMIHWILQVARRIAFRCVLHRCGSQDIR 52
            P+AQ AFK  MIH  LQ   RIAFRCVLHR  SQDIR
Sbjct:   35 PQAQFAFKDSMIHVFLQFTLRIAFRCVLHRSESQDIR 71          
BLAST of mRNA_D-herbacea_F_contig1062.647.1 vs. uniprot
Match: A0A1U7LWX4_NEOID (Uncharacterized protein n=1 Tax=Neolecta irregularis (strain DAH-3) TaxID=1198029 RepID=A0A1U7LWX4_NEOID)

HSP 1 Score: 46.6 bits (109), Expect = 8.990e-6
Identity = 21/27 (77.78%), Postives = 22/27 (81.48%), Query Frame = 0
Query:   26 MIHWILQVARRIAFRCVLHRCGSQDIR 52
            MIH ILQ    IAFRCVLHRCGSQ+IR
Sbjct:    1 MIHGILQFTLLIAFRCVLHRCGSQEIR 27          
BLAST of mRNA_D-herbacea_F_contig1062.647.1 vs. uniprot
Match: A0A822ZKL4_NELNU (Uncharacterized protein n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A822ZKL4_NELNU)

HSP 1 Score: 47.8 bits (112), Expect = 1.050e-5
Identity = 24/37 (64.86%), Postives = 26/37 (70.27%), Query Frame = 0
Query:   16 PEAQDAFKILMIHWILQVARRIAFRCVLHRCGSQDIR 52
            P AQ AFK  M+H ILQ    IAFR VLHRC S+DIR
Sbjct:   14 PRAQLAFKDSMVHGILQFTPSIAFRYVLHRCESRDIR 50          
BLAST of mRNA_D-herbacea_F_contig1062.647.1 vs. uniprot
Match: A0A484MRJ4_9ASTE (BZIP domain-containing protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484MRJ4_9ASTE)

HSP 1 Score: 50.1 bits (118), Expect = 1.220e-5
Identity = 24/35 (68.57%), Postives = 27/35 (77.14%), Query Frame = 0
Query:   17 EAQDAFKILMIHWILQVARRIAFRCVLHRCGSQDI 51
            EAQ AFK+ M+H ILQ   RIAFR VLHRC S+DI
Sbjct:  499 EAQLAFKVSMVHGILQFTPRIAFRYVLHRCKSRDI 533          
BLAST of mRNA_D-herbacea_F_contig1062.647.1 vs. uniprot
Match: A0A835MDF3_9ROSI (Uncharacterized protein n=1 Tax=Salix dunnii TaxID=1413687 RepID=A0A835MDF3_9ROSI)

HSP 1 Score: 47.8 bits (112), Expect = 5.900e-5
Identity = 24/37 (64.86%), Postives = 26/37 (70.27%), Query Frame = 0
Query:   16 PEAQDAFKILMIHWILQVARRIAFRCVLHRCGSQDIR 52
            P AQ AFK  M+H ILQ    IAFR VLHRC S+DIR
Sbjct:   14 PRAQLAFKDSMVHGILQFTPSIAFRYVLHRCESRDIR 50          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1062.647.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1E7F0G0_9STRA4.630e-2073.58Uncharacterized protein (Fragment) n=2 Tax=Fragila... [more]
A0A524MI88_9PROT5.980e-1871.70Uncharacterized protein n=1 Tax=Nitrosomonadales b... [more]
B8CEF4_THAPS3.440e-1772.55Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
K0S3C5_THAOC4.060e-1772.55Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A9U5J8_PHYPA1.230e-870.73Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
D8UMG8_VOLCA2.280e-770.27Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]
A0A1U7LWX4_NEOID8.990e-677.78Uncharacterized protein n=1 Tax=Neolecta irregular... [more]
A0A822ZKL4_NELNU1.050e-564.86Uncharacterized protein n=1 Tax=Nelumbo nucifera T... [more]
A0A484MRJ4_9ASTE1.220e-568.57BZIP domain-containing protein n=1 Tax=Cuscuta cam... [more]
A0A835MDF3_9ROSI5.900e-564.86Uncharacterized protein n=1 Tax=Salix dunnii TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1062contigD-herbacea_F_contig1062:1741..1902 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1062.647.1mRNA_D-herbacea_F_contig1062.647.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1062 1741..1902 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1062.647.1 ID=prot_D-herbacea_F_contig1062.647.1|Name=mRNA_D-herbacea_F_contig1062.647.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=54bp
SGVNRHSDKHAPRNIPEAQDAFKILMIHWILQVARRIAFRCVLHRCGSQD
IRR*
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