prot_D-herbacea_F_contig106.645.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig106.645.1
Unique Nameprot_D-herbacea_F_contig106.645.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length238
Homology
BLAST of mRNA_D-herbacea_F_contig106.645.1 vs. uniprot
Match: D8LB82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB82_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 1.360e-60
Identity = 101/126 (80.16%), Postives = 112/126 (88.89%), Query Frame = 0
Query:    7 KKAKVQTEPCLFFCKFGKCSKSQEECRFVHDKSKVAVCRAFLR-GKCEKKDACLLTHAIQAEKMPVCIYFERGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKHELPG-RKRTREAST 130
            KK K   EPCLFFC+FGKCSKS EECR+VHD++KVAVCRAFLR G C+K + CLLTHA+QAEKMPVCIYFE+GMCFTPNCPYLHVKVS+NAAVCP FLKGYCPDGTACRLKHELP  RKR R+ +T
Sbjct:  763 KKTKT-AEPCLFFCRFGKCSKSDEECRYVHDRAKVAVCRAFLRKGGCDKGNKCLLTHAVQAEKMPVCIYFEKGMCFTPNCPYLHVKVSQNAAVCPRFLKGYCPDGTACRLKHELPDPRKRARDVTT 887          
BLAST of mRNA_D-herbacea_F_contig106.645.1 vs. uniprot
Match: A0A6H5KC32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC32_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 1.430e-60
Identity = 102/135 (75.56%), Postives = 118/135 (87.41%), Query Frame = 0
Query:    5 AKKKAKVQT-EPCLFFCKFGKCSKSQEECRFVHDKSKVAVCRAFLR-GKCEKKDACLLTHAIQAEKMPVCIYFERGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKHELPG-RKRTREASTERDQGE 136
            AK+K+  +T EPCLFFC+FGKCS+S EECR+VHD++KVAVCRAFLR G C+K D CLLTHA+QAEKMPVCIYFE+GMCFTPNCPYLHVKVS+NAAVCP FLKG+CPDGTACRLKHELP  RKR ++ S   D G+
Sbjct:  774 AKRKSNNKTGEPCLFFCRFGKCSRSDEECRYVHDRAKVAVCRAFLRKGGCDKGDKCLLTHAVQAEKMPVCIYFEKGMCFTPNCPYLHVKVSQNAAVCPRFLKGHCPDGTACRLKHELPDPRKRAKDDSAGGDHGD 908          
BLAST of mRNA_D-herbacea_F_contig106.645.1 vs. uniprot
Match: A0A485LIR1_9STRA (Aste57867_21895 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIR1_9STRA)

HSP 1 Score: 131 bits (330), Expect = 9.290e-33
Identity = 60/119 (50.42%), Postives = 74/119 (62.18%), Query Frame = 0
Query:    2 PRGAKKKAKVQTEPCLFFCKFGKCSKSQEECRFVHDKSKVAVCRAFLRGKCEKKDACLLTHAIQAEKMPVCIYFERGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKHELP 120
            P G  + +  +TE C+F+ K G+C K +  C FVHD  K+A+CR FLRG C     C L+H +   KMP C  F +GMC    C Y HV VSR+AA+C  F KGYCPDG  CRLKHE P
Sbjct:  193 PGGGAQASVPRTEYCMFYNKLGECKK-KNACLFVHDSRKIAICRKFLRGACHDGAKCKLSHQLDENKMPDCAMFLKGMCTRDGCHYRHVNVSRDAAICEAFHKGYCPDGATCRLKHEFP 310          
BLAST of mRNA_D-herbacea_F_contig106.645.1 vs. uniprot
Match: A0A553NNT2_TIGCA (Uncharacterized protein (Fragment) n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553NNT2_TIGCA)

HSP 1 Score: 130 bits (326), Expect = 2.320e-31
Identity = 58/106 (54.72%), Postives = 75/106 (70.75%), Query Frame = 0
Query:   16 CLFFCKFGKCSK-SQEECRFVHDKSKVAVCRAFLRGKCEKK-DACLLTHAIQAEKMPVCIYFERGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKHEL 119
            C+FF KFG+C K +Q  C ++HD +KVAVCR FL+G C K  D CLLTH +  +KMP C +F+ G C   +CPY HVKVS +AA+CP F +GYCP G AC L+H +
Sbjct:  306 CMFFNKFGRCQKRAQGLCPYLHDPAKVAVCRRFLQGSCPKAADECLLTHKVSPDKMPACKFFQLGQCGRDHCPYNHVKVSADAALCPAFRQGYCPQGQACTLRHAM 411          
BLAST of mRNA_D-herbacea_F_contig106.645.1 vs. uniprot
Match: A0A8J4PM82_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PM82_9MYCE)

HSP 1 Score: 122 bits (306), Expect = 1.540e-28
Identity = 53/103 (51.46%), Postives = 75/103 (72.82%), Query Frame = 0
Query:   16 CLFFCKFGKCSKSQEECRFVHDKSKVAVCRAFLRGKCEKKDACLLTHAI-QAEKMPVCIYFERGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKH 117
            CL++ +FGKC+ S ++C+++HDKSK+  C  FL G C+  + C L H I   E+MP+C  + +GMC   NCPYLHV VS+NA +CP+F KGYCP+G+AC +KH
Sbjct:  348 CLYYNRFGKCN-SGDKCKYIHDKSKIRTCPKFLSGTCQDSE-CHLKHEITDLEQMPICYLYLKGMCTKVNCPYLHVFVSKNAKLCPDFQKGYCPNGSACTMKH 448          
BLAST of mRNA_D-herbacea_F_contig106.645.1 vs. uniprot
Match: A0A7S1I654_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1I654_9EUGL)

HSP 1 Score: 118 bits (296), Expect = 4.670e-27
Identity = 59/119 (49.58%), Postives = 76/119 (63.87%), Query Frame = 0
Query:    5 AKKKAKVQTEPCLFFCKFGKCSKSQEECRFVHDKSKVAVCRAFLRGKCEKKDACLLTHAIQAEKMPVC-IYFERGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKHELPGR 122
            AKKK +   E C+F+ +FG C +  + C+++HD  KVAVCR FL G+C   D C L H +   KMP C I+   G+CF   CPYLHVKVS +A VCP F KG+CP G AC+ +HE   R
Sbjct:  407 AKKKGR---EYCIFYNRFGACKRGAD-CKYIHDPQKVAVCRRFLLGECTAAD-CPLWHKLDQAKMPHCKIFITTGLCFRKQCPYLHVKVSPDAPVCPAFQKGHCPKGEACKKRHEYTRR 520          
BLAST of mRNA_D-herbacea_F_contig106.645.1 vs. uniprot
Match: Q54X64_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54X64_DICDI)

HSP 1 Score: 115 bits (289), Expect = 5.180e-26
Identity = 49/110 (44.55%), Postives = 70/110 (63.64%), Query Frame = 0
Query:    8 KAKVQTEPCLFFCKFGKCSKSQEECRFVHDKSKVAVCRAFLRGKCEKKDACLLTHAIQAEKMPVCIYFERGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKH 117
            K K + + CLFF +FGKC+   + CR+ H+  +V +C  F+ G C+  D C L H++  + MP+C  F   MC   NCPYLHV +S++  VCP+F+ GYCP G+ C LKH
Sbjct:  357 KKKKKKQYCLFFNRFGKCNNGND-CRYEHEPKRVRICPKFIAGNCDDPD-CKLQHSLDLDLMPICHLFLNRMCTNDNCPYLHVNLSKDTEVCPDFISGYCPKGSKCELKH 464          
BLAST of mRNA_D-herbacea_F_contig106.645.1 vs. uniprot
Match: A0A1X7VEH9_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VEH9_AMPQE)

HSP 1 Score: 114 bits (284), Expect = 2.920e-25
Identity = 48/110 (43.64%), Postives = 74/110 (67.27%), Query Frame = 0
Query:   11 VQTEPCLFFCKFGKCSKSQEECRFVHDKSKVAVCRAFLRGKCEKKD-ACLLTHAIQAEKMPVCIYFERGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKHEL 119
            ++++ CL++ +FG+C++  ++C+++HD  ++A+C  FLRGKCE  D +C  +H I  EKMPV       +C   NCPYLHV V  NA +C +F+KGYCP G  C+ +H L
Sbjct:  513 LRSQYCLYYNRFGRCNRG-DQCQYIHDPKRIAICSKFLRGKCENIDGSCPFSHNISKEKMPVXXXXXXXVCTRDNCPYLHVSVGPNAELCMDFIKGYCPLGEDCKKQHTL 621          
BLAST of mRNA_D-herbacea_F_contig106.645.1 vs. uniprot
Match: A0A194WT69_9HELO (Uncharacterized protein n=1 Tax=Mollisia scopiformis TaxID=149040 RepID=A0A194WT69_9HELO)

HSP 1 Score: 111 bits (278), Expect = 3.330e-25
Identity = 55/114 (48.25%), Postives = 72/114 (63.16%), Query Frame = 0
Query:   10 KVQTEPCLFFCKFGKCSKSQEECRFVHDKSKVAVCRAFLRGKCEKKDACLLTHAIQAEKMPVCIYFERGMCFTPNCPYLHVKVSRNAAVCPNF-LKGYCPDGTAC--RLKHELP 120
            K+Q EPC  F   G C+K  + CR++HD SKVAVC+ FL+G C   D C L+H +  E+ P C++F +G C  PNC Y HV+VS +A VC  F + GYC  GT+C  R  HE P
Sbjct:  192 KIQ-EPCRAFTTTGSCNKGPK-CRYIHDPSKVAVCKKFLKGSCPSGDKCDLSHELTPERTPTCLHFAKGNCSKPNCQYPHVRVSPSALVCRAFGIYGYCEKGTSCTERHVHECP 303          
BLAST of mRNA_D-herbacea_F_contig106.645.1 vs. uniprot
Match: A0A2V1CF14_9HELO (Uncharacterized protein n=1 Tax=Cadophora sp. DSE1049 TaxID=1485229 RepID=A0A2V1CF14_9HELO)

HSP 1 Score: 106 bits (264), Expect = 4.340e-23
Identity = 58/128 (45.31%), Postives = 76/128 (59.38%), Query Frame = 0
Query:    8 KAKVQTEPCLFFCKFGKCSKSQEECRFVHDKSKVAVCRAFL-RGKCEKKDACLLTHAIQAEKMPVCIYFERGMCFTPNCPYLHVKVSRNAAVCPNF-LKGYCPDGTACRLKH--ELPGRKRTREASTE 131
            KAK  T+PC  F   G CS    +C FVHD SKVAVCR FL +G C   ++C L+H +  E+ P+C++F RG C   NC Y HV+VS +A VC +F + GYC  G +C  +H  E P    T   +TE
Sbjct:  219 KAKKTTKPCKAFNITGSCS--APDCPFVHDPSKVAVCRDFLQKGSCPSGESCDLSHELTPERTPICLHFARGNCSNGNCRYTHVRVSPSALVCRSFGIYGYCEKGASCTDRHVNECPDFSNTGTCTTE 344          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig106.645.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB82_ECTSI1.360e-6080.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KC32_9PHAE1.430e-6075.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A485LIR1_9STRA9.290e-3350.42Aste57867_21895 protein n=1 Tax=Aphanomyces stella... [more]
A0A553NNT2_TIGCA2.320e-3154.72Uncharacterized protein (Fragment) n=1 Tax=Tigriop... [more]
A0A8J4PM82_9MYCE1.540e-2851.46Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A7S1I654_9EUGL4.670e-2749.58Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
Q54X64_DICDI5.180e-2644.55Uncharacterized protein n=1 Tax=Dictyostelium disc... [more]
A0A1X7VEH9_AMPQE2.920e-2543.64Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
A0A194WT69_9HELO3.330e-2548.25Uncharacterized protein n=1 Tax=Mollisia scopiform... [more]
A0A2V1CF14_9HELO4.340e-2345.31Uncharacterized protein n=1 Tax=Cadophora sp. DSE1... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 10..38
e-value: 2.4
score: 13.3
coord: 93..119
e-value: 9.2E-5
score: 31.8
coord: 39..64
e-value: 3.8
score: 11.6
coord: 66..91
e-value: 7.3E-4
score: 28.8
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 10..39
score: 12.164
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 66..92
score: 10.859
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 43..65
score: 9.554
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 93..120
score: 14.004
NoneNo IPR availableGENE3D4.10.1000.10coord: 37..94
e-value: 2.7E-17
score: 64.4
NoneNo IPR availableGENE3D4.10.1000.10coord: 95..153
e-value: 1.8E-5
score: 26.6
NoneNo IPR availablePANTHERPTHR46156FAMILY NOT NAMEDcoord: 7..118
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..205
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 206..234
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 235..237
NoneNo IPR availableTMHMMTMhelixcoord: 207..229
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 85..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig106contigD-herbacea_F_contig106:908019..909910 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig106.645.1mRNA_D-herbacea_F_contig106.645.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig106 908019..909910 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig106.645.1 ID=prot_D-herbacea_F_contig106.645.1|Name=mRNA_D-herbacea_F_contig106.645.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=238bp
GPRGAKKKAKVQTEPCLFFCKFGKCSKSQEECRFVHDKSKVAVCRAFLRG
KCEKKDACLLTHAIQAEKMPVCIYFERGMCFTPNCPYLHVKVSRNAAVCP
NFLKGYCPDGTACRLKHELPGRKRTREASTERDQGEEGATAGKKMKPKAS
ETGLKARRREREPSSPLQSFTAVWSQPSLEHLLPLDTFVGGQARGSKQAS
LGVSQCLVHVFFFSFTLGLTLSPLSPTPFAYLFFFFP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036855Znf_CCCH_sf
IPR000571Znf_CCCH