mRNA_D-herbacea_F_contig106.645.1 (mRNA) Desmarestia herbacea DmunF female
|
Overview
Homology
BLAST of mRNA_D-herbacea_F_contig106.645.1 vs. uniprot
Match: D8LB82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB82_ECTSI) HSP 1 Score: 215 bits (547), Expect = 1.360e-60 Identity = 101/126 (80.16%), Postives = 112/126 (88.89%), Query Frame = 1
Query: 19 KKAKVQTEPCLFFCKFGKCSKSQEECRFVHDKSKVAVCRAFLR-GKCEKKDACLLTHAIQAEKMPVCIYFERGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKHELPG-RKRTREAST 390
KK K EPCLFFC+FGKCSKS EECR+VHD++KVAVCRAFLR G C+K + CLLTHA+QAEKMPVCIYFE+GMCFTPNCPYLHVKVS+NAAVCP FLKGYCPDGTACRLKHELP RKR R+ +T
Sbjct: 763 KKTKT-AEPCLFFCRFGKCSKSDEECRYVHDRAKVAVCRAFLRKGGCDKGNKCLLTHAVQAEKMPVCIYFEKGMCFTPNCPYLHVKVSQNAAVCPRFLKGYCPDGTACRLKHELPDPRKRARDVTT 887
BLAST of mRNA_D-herbacea_F_contig106.645.1 vs. uniprot
Match: A0A6H5KC32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC32_9PHAE) HSP 1 Score: 215 bits (547), Expect = 1.430e-60 Identity = 102/135 (75.56%), Postives = 118/135 (87.41%), Query Frame = 1
Query: 13 AKKKAKVQT-EPCLFFCKFGKCSKSQEECRFVHDKSKVAVCRAFLR-GKCEKKDACLLTHAIQAEKMPVCIYFERGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKHELPG-RKRTREASTERDQGE 408
AK+K+ +T EPCLFFC+FGKCS+S EECR+VHD++KVAVCRAFLR G C+K D CLLTHA+QAEKMPVCIYFE+GMCFTPNCPYLHVKVS+NAAVCP FLKG+CPDGTACRLKHELP RKR ++ S D G+
Sbjct: 774 AKRKSNNKTGEPCLFFCRFGKCSRSDEECRYVHDRAKVAVCRAFLRKGGCDKGDKCLLTHAVQAEKMPVCIYFEKGMCFTPNCPYLHVKVSQNAAVCPRFLKGHCPDGTACRLKHELPDPRKRAKDDSAGGDHGD 908
BLAST of mRNA_D-herbacea_F_contig106.645.1 vs. uniprot
Match: A0A485LIR1_9STRA (Aste57867_21895 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIR1_9STRA) HSP 1 Score: 131 bits (330), Expect = 9.290e-33 Identity = 60/119 (50.42%), Postives = 74/119 (62.18%), Query Frame = 1
Query: 4 PRGAKKKAKVQTEPCLFFCKFGKCSKSQEECRFVHDKSKVAVCRAFLRGKCEKKDACLLTHAIQAEKMPVCIYFERGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKHELP 360
P G + + +TE C+F+ K G+C K + C FVHD K+A+CR FLRG C C L+H + KMP C F +GMC C Y HV VSR+AA+C F KGYCPDG CRLKHE P
Sbjct: 193 PGGGAQASVPRTEYCMFYNKLGECKK-KNACLFVHDSRKIAICRKFLRGACHDGAKCKLSHQLDENKMPDCAMFLKGMCTRDGCHYRHVNVSRDAAICEAFHKGYCPDGATCRLKHEFP 310
BLAST of mRNA_D-herbacea_F_contig106.645.1 vs. uniprot
Match: A0A553NNT2_TIGCA (Uncharacterized protein (Fragment) n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553NNT2_TIGCA) HSP 1 Score: 130 bits (326), Expect = 2.320e-31 Identity = 58/106 (54.72%), Postives = 75/106 (70.75%), Query Frame = 1
Query: 46 CLFFCKFGKCSK-SQEECRFVHDKSKVAVCRAFLRGKCEKK-DACLLTHAIQAEKMPVCIYFERGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKHEL 357
C+FF KFG+C K +Q C ++HD +KVAVCR FL+G C K D CLLTH + +KMP C +F+ G C +CPY HVKVS +AA+CP F +GYCP G AC L+H +
Sbjct: 306 CMFFNKFGRCQKRAQGLCPYLHDPAKVAVCRRFLQGSCPKAADECLLTHKVSPDKMPACKFFQLGQCGRDHCPYNHVKVSADAALCPAFRQGYCPQGQACTLRHAM 411
BLAST of mRNA_D-herbacea_F_contig106.645.1 vs. uniprot
Match: A0A8J4PM82_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PM82_9MYCE) HSP 1 Score: 122 bits (306), Expect = 1.540e-28 Identity = 53/103 (51.46%), Postives = 75/103 (72.82%), Query Frame = 1
Query: 46 CLFFCKFGKCSKSQEECRFVHDKSKVAVCRAFLRGKCEKKDACLLTHAI-QAEKMPVCIYFERGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKH 351
CL++ +FGKC+ S ++C+++HDKSK+ C FL G C+ + C L H I E+MP+C + +GMC NCPYLHV VS+NA +CP+F KGYCP+G+AC +KH
Sbjct: 348 CLYYNRFGKCN-SGDKCKYIHDKSKIRTCPKFLSGTCQDSE-CHLKHEITDLEQMPICYLYLKGMCTKVNCPYLHVFVSKNAKLCPDFQKGYCPNGSACTMKH 448
BLAST of mRNA_D-herbacea_F_contig106.645.1 vs. uniprot
Match: A0A7S1I654_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1I654_9EUGL) HSP 1 Score: 118 bits (296), Expect = 4.670e-27 Identity = 59/119 (49.58%), Postives = 76/119 (63.87%), Query Frame = 1
Query: 13 AKKKAKVQTEPCLFFCKFGKCSKSQEECRFVHDKSKVAVCRAFLRGKCEKKDACLLTHAIQAEKMPVC-IYFERGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKHELPGR 366
AKKK + E C+F+ +FG C + + C+++HD KVAVCR FL G+C D C L H + KMP C I+ G+CF CPYLHVKVS +A VCP F KG+CP G AC+ +HE R
Sbjct: 407 AKKKGR---EYCIFYNRFGACKRGAD-CKYIHDPQKVAVCRRFLLGECTAAD-CPLWHKLDQAKMPHCKIFITTGLCFRKQCPYLHVKVSPDAPVCPAFQKGHCPKGEACKKRHEYTRR 520
BLAST of mRNA_D-herbacea_F_contig106.645.1 vs. uniprot
Match: Q54X64_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54X64_DICDI) HSP 1 Score: 115 bits (289), Expect = 5.180e-26 Identity = 49/110 (44.55%), Postives = 70/110 (63.64%), Query Frame = 1
Query: 22 KAKVQTEPCLFFCKFGKCSKSQEECRFVHDKSKVAVCRAFLRGKCEKKDACLLTHAIQAEKMPVCIYFERGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKH 351
K K + + CLFF +FGKC+ + CR+ H+ +V +C F+ G C+ D C L H++ + MP+C F MC NCPYLHV +S++ VCP+F+ GYCP G+ C LKH
Sbjct: 357 KKKKKKQYCLFFNRFGKCNNGND-CRYEHEPKRVRICPKFIAGNCDDPD-CKLQHSLDLDLMPICHLFLNRMCTNDNCPYLHVNLSKDTEVCPDFISGYCPKGSKCELKH 464
BLAST of mRNA_D-herbacea_F_contig106.645.1 vs. uniprot
Match: A0A1X7VEH9_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VEH9_AMPQE) HSP 1 Score: 114 bits (284), Expect = 2.920e-25 Identity = 48/110 (43.64%), Postives = 74/110 (67.27%), Query Frame = 1
Query: 31 VQTEPCLFFCKFGKCSKSQEECRFVHDKSKVAVCRAFLRGKCEKKD-ACLLTHAIQAEKMPVCIYFERGMCFTPNCPYLHVKVSRNAAVCPNFLKGYCPDGTACRLKHEL 357
++++ CL++ +FG+C++ ++C+++HD ++A+C FLRGKCE D +C +H I EKMPV +C NCPYLHV V NA +C +F+KGYCP G C+ +H L
Sbjct: 513 LRSQYCLYYNRFGRCNRG-DQCQYIHDPKRIAICSKFLRGKCENIDGSCPFSHNISKEKMPVXXXXXXXVCTRDNCPYLHVSVGPNAELCMDFIKGYCPLGEDCKKQHTL 621
BLAST of mRNA_D-herbacea_F_contig106.645.1 vs. uniprot
Match: A0A194WT69_9HELO (Uncharacterized protein n=1 Tax=Mollisia scopiformis TaxID=149040 RepID=A0A194WT69_9HELO) HSP 1 Score: 111 bits (278), Expect = 3.330e-25 Identity = 55/114 (48.25%), Postives = 72/114 (63.16%), Query Frame = 1
Query: 28 KVQTEPCLFFCKFGKCSKSQEECRFVHDKSKVAVCRAFLRGKCEKKDACLLTHAIQAEKMPVCIYFERGMCFTPNCPYLHVKVSRNAAVCPNF-LKGYCPDGTAC--RLKHELP 360
K+Q EPC F G C+K + CR++HD SKVAVC+ FL+G C D C L+H + E+ P C++F +G C PNC Y HV+VS +A VC F + GYC GT+C R HE P
Sbjct: 192 KIQ-EPCRAFTTTGSCNKGPK-CRYIHDPSKVAVCKKFLKGSCPSGDKCDLSHELTPERTPTCLHFAKGNCSKPNCQYPHVRVSPSALVCRAFGIYGYCEKGTSCTERHVHECP 303
BLAST of mRNA_D-herbacea_F_contig106.645.1 vs. uniprot
Match: A0A2V1CF14_9HELO (Uncharacterized protein n=1 Tax=Cadophora sp. DSE1049 TaxID=1485229 RepID=A0A2V1CF14_9HELO) HSP 1 Score: 106 bits (264), Expect = 4.340e-23 Identity = 58/128 (45.31%), Postives = 76/128 (59.38%), Query Frame = 1
Query: 22 KAKVQTEPCLFFCKFGKCSKSQEECRFVHDKSKVAVCRAFL-RGKCEKKDACLLTHAIQAEKMPVCIYFERGMCFTPNCPYLHVKVSRNAAVCPNF-LKGYCPDGTACRLKH--ELPGRKRTREASTE 393
KAK T+PC F G CS +C FVHD SKVAVCR FL +G C ++C L+H + E+ P+C++F RG C NC Y HV+VS +A VC +F + GYC G +C +H E P T +TE
Sbjct: 219 KAKKTTKPCKAFNITGSCS--APDCPFVHDPSKVAVCRDFLQKGSCPSGESCDLSHELTPERTPICLHFARGNCSNGNCRYTHVRVSPSALVCRSFGIYGYCEKGASCTDRHVNECPDFSNTGTCTTE 344 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig106.645.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig106.645.1 >prot_D-herbacea_F_contig106.645.1 ID=prot_D-herbacea_F_contig106.645.1|Name=mRNA_D-herbacea_F_contig106.645.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=238bp GPRGAKKKAKVQTEPCLFFCKFGKCSKSQEECRFVHDKSKVAVCRAFLRGback to top mRNA from alignment at D-herbacea_F_contig106:908019..909910+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig106.645.1 ID=mRNA_D-herbacea_F_contig106.645.1|Name=mRNA_D-herbacea_F_contig106.645.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=1892bp|location=Sequence derived from alignment at D-herbacea_F_contig106:908019..909910+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig106:908019..909910+ >mRNA_D-herbacea_F_contig106.645.1 ID=mRNA_D-herbacea_F_contig106.645.1|Name=mRNA_D-herbacea_F_contig106.645.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1428bp|location=Sequence derived from alignment at D-herbacea_F_contig106:908019..909910+ (Desmarestia herbacea DmunF female)back to top |