prot_D-herbacea_F_contig106.637.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig106.637.1
Unique Nameprot_D-herbacea_F_contig106.637.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length758
Homology
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BLAST of mRNA_D-herbacea_F_contig106.637.1 vs. uniprot
Match: D8LB51_ECTSI (SAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB51_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 5.730e-78
Identity = 526/760 (69.21%), Postives = 565/760 (74.34%), Query Frame = 0 
Query:    1 MLQALEEGPKNAIVCTIAVNQLGRMGKWREAVELLDGMGKGGDGSDRPDAFVYAAAITACGKAGRPVEAVALLTEMPSRRVEPDVVCFGAAISALGEVAAGQSTSTWGVKPESTYKNASDGDDGG---VAGGTKAIVPTRAHEKAVALIQQMRRDGPSPNQQCFASAITACARALDPRAALEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGMENAYGIKPSTITYNSAISALSRAGRARDARALLDEMSERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVTKRRVEYIRDKVSGNGNSQKTKPRPRKTPATTTVSSRDLEALSETEPSLSSGGAMAAKTTTTKKVSRGAIHGSKRGGRGAMEEDNEGEGEEEAGADFLAELRDRFAPSDDELASEEDLALAEDGILFGEEKDEVKVEVEVEEMAGTAPVVVGGGRGDSDLELDASDISRSEAKMPPAVVVVGEREGELTTGDGEATGVTPSTSVTLLLEDVKTMKATELKAELRGRGLRLSGNKAELAARLEEALQETAA 757
            ML+ALEEGPKNAIVCT+A+  LG+ GKWREAVE+LDGMGKGGDGSDRPDAF YAA I ACGKAGRPVEAVALLTEMP+RRV+PDVVCFG+AI ALGEVA  Q+ STWG       K A +G +GG   +A       PTRAHEKA+ LIQ+MRR+GPSPN QC+ASAITACARA DPR+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GME AYG+K            LSRAGRAR+A+ALL+EMSER XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   PVTKRRVEYI+ K+SG G  +    R             D   + E               T  + V    +                      AGADFL ELR RFA   +ELAS+ DL L  D +L        +V+   E  A T  V V G  GDS +     D   SE     A   V E   E   GD    G   +    L+LE  K MK T+LK EL+GRGLR+SGNKAEL ARLEEALQ+ AA
Sbjct:  208 MLEALEEGPKNAIVCTVAITCLGQAGKWREAVEVLDGMGKGGDGSDRPDAFAYAATINACGKAGRPVEAVALLTEMPTRRVKPDVVCFGSAIFALGEVAGTQNRSTWG------RKGADEGGEGGDKPIASAVADPKPTRAHEKALELIQEMRREGPSPNSQCYASAITACARAHDPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGMEKAYGVKXXXXXXXXXXXGLSRAGRAREAKALLNEMSERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLPVTKRRVEYIQAKISGGGGGRSXXXR-----------KNDRSRVQE--------------RTKAEDVVATTLR---------------------AGADFLEELRQRFAVETEELASDSDLDLLADDVLLAGAISSGEVKTNGEAGAATTSVDVTGAVGDSPVSGVDGDDRTSEDGRSEADETVAEIADEAVRGDISEQGEEDTNKAQLVLEGFKAMKVTDLKVELKGRGLRVSGNKAELLARLEEALQQPAA 915
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BLAST of mRNA_D-herbacea_F_contig106.637.1 vs. uniprot
Match: A0A6H5KL58_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL58_9PHAE)

HSP 1 Score: 263 bits (671), Expect = 4.560e-73
Identity = 528/770 (68.57%), Postives = 568/770 (73.77%), Query Frame = 0 
Query:    1 MLQALEEGPKNAIVCTIAVNQLGRMGKWREAVELLDGMGKGGDGSDRPDAFVYAAAITACGKAGRPVEAVALLTEMPSRRVEPDVVCFGAAISALGEVAAGQSTSTWGVKPESTYKNASDGD-------DGGVAGGTKAIVPTRAHEKAVALIQQMRRDGPSPNQQCFASAITACARALDPRAALEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGMENAYGIKPSTITYNSAISALSRAGRARDARALLDEMSERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVTKRRVEYIRDKVSGNGNSQKTKPRPRKTPATTTVSSRDLEALSETEPSLSSGGAMAAKTTTTKKVSRGA------IHGSKRGGRGAMEEDNEGEGEEEAGADFLAELRDRFAPSDDELASEEDLALAEDGILFGEEKDEVKVEVEVEEMAGTAPVVVGGGRGDSDLELDASDISRSEAKMPPAVVVVGEREGELTTGDGEATGVTPSTSVTLLLEDVKTMKATELKAELRGRGLRLSGNKAELAARLEEALQETAA 757
            ML+ALEEGPKNAIVCT+A+  LG+ GKWREAVE+LDGMGKGG  SDRPDAF YAA I ACGKAGRPVEAVALLTEMP+RRV+PDVVCFG+AI ALGEVA  Q+ STWG       K A++G        D  +A       PTRAHEKA+ LIQ MRR+GPSPN QC+ASAITACARA DPR+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GME AYG+K         IS LSRAGRAR+A+ALL+EMSER XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   PVTKRRVEYI+ K+SG G          ++       + D+                                    +   K G  G+   D    GEEEAGADFL ELR RFA   +ELAS+ DL L  D +L        +VE   E  A T  V V G  GDS +     D    E     A   V E   E    D    G   +    L+LE  KTMK T+LK EL+GRGLR+SGNKAEL ARLE+ALQ+ AA
Sbjct:   18 MLEALEEGPKNAIVCTVAITCLGQAGKWREAVEVLDGMGKGG--SDRPDAFAYAATINACGKAGRPVEAVALLTEMPTRRVKPDVVCFGSAIFALGEVAGTQNRSTWG------RKGANEGGXXXXXXXDMPMAAAVAGPKPTRAHEKALELIQDMRREGPSPNSQCYASAITACARAHDPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGMEKAYGVKXXXXXXXXXISGLSRAGRAREAKALLNEMSERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLPVTKRRVEYIQAKISGGGGRXXXXXXXXRSRVKERTKAEDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQGKSGKGGSQAAD----GEEEAGADFLEELRQRFAVETEELASDSDLDLLADDVLLAGANSYGEVETNGEAGAVTTSVHVTGAVGDSPVSGADGDDRMPEDGRSEADETVAEIADEAVRSDISGQGE-DTNKAQLVLEGFKTMKVTDLKVELKGRGLRVSGNKAELLARLEKALQQPAA 774
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BLAST of mRNA_D-herbacea_F_contig106.637.1 vs. uniprot
Match: A0A0M0JSH9_9EUKA (Macrocin-o-methyltransferase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JSH9_9EUKA)

HSP 1 Score: 63.5 bits (153), Expect = 1.310e-6
Identity = 48/162 (29.63%), Postives = 73/162 (45.06%), Query Frame = 0 
Query:   10 KNAIVCTIAVNQLGRMGKWREAVELLDGMGKGGDGSDRPDAFVYAAAITACGKAGRPVEAVALLTEMPSRRVEPDVVCFGAAISALGEVAAGQSTSTWGVKPESTYKNASDGDDGGVAGGTKAIVPTRAHEKAVALIQQMRRDGPSPNQQCFASAITACARA 171
            ++A   TIA++  GR+  W++A++LL GMG    G   P+ + + AA+TAC +AG+   A  LL  M   +V+P+V  +   I   G VA  Q +                              P   +E+   L   M  DG  PN + + SAI AC R+
Sbjct:   85 RSATEYTIAIDACGRVEAWKQALDLLHGMGSADGGGVAPNVYTFTAAMTACTRAGQIEPAYELLASMREAKVKPNVFTY--TILFTGMVAQTQRS------------------------------PGPKYERIDQLWSSMLADGVGPNLRTYRSAILACERS 214
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig106.637.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LB51_ECTSI5.730e-7869.21SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KL58_9PHAE4.560e-7368.57SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A0M0JSH9_9EUKA1.310e-629.63Macrocin-o-methyltransferase n=1 Tax=Chrysochromul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003034SAP domainSMARTSM00513sap_9coord: 718..752
e-value: 3.8E-9
score: 46.4
IPR003034SAP domainPFAMPF02037SAPcoord: 719..752
e-value: 1.6E-10
score: 40.5
IPR003034SAP domainPROSITEPS50800SAPcoord: 718..752
score: 11.125
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 227..275
e-value: 1.9E-11
score: 44.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 52..80
e-value: 0.0063
score: 16.7
coord: 15..40
e-value: 0.21
score: 11.9
coord: 475..505
e-value: 6.0E-4
score: 19.9
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 145..205
e-value: 4.0E-6
score: 26.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 230..263
e-value: 6.0E-9
score: 33.5
coord: 440..474
e-value: 3.0E-4
score: 18.8
coord: 300..333
e-value: 4.0E-7
score: 27.8
coord: 52..85
e-value: 8.9E-6
score: 23.6
coord: 195..228
e-value: 0.0017
score: 16.4
coord: 335..369
e-value: 1.6E-7
score: 29.1
coord: 371..402
e-value: 7.3E-4
score: 17.5
coord: 475..507
e-value: 1.3E-4
score: 19.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 473..507
score: 10.402
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 49..83
score: 10.786
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 438..472
score: 9.854
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 298..332
score: 11.498
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 333..367
score: 12.255
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 403..437
score: 10.073
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 157..191
score: 8.835
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 263..297
score: 9.558
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 11..45
score: 7.805
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 228..262
score: 13.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 368..402
score: 10.271
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 192..227
score: 8.44
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..121
e-value: 2.9E-17
score: 65.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 421..504
e-value: 3.8E-16
score: 61.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 298..420
e-value: 4.0E-32
score: 113.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 136..295
e-value: 5.4E-45
score: 156.0
IPR036361SAP domain superfamilyGENE3D1.10.720.30coord: 703..757
e-value: 2.5E-11
score: 44.9
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 716..753
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 304..468
e-value: 6.3E-16
score: 58.4
NoneNo IPR availablePANTHERPTHR46862FAMILY NOT NAMEDcoord: 139..263
coord: 232..442
coord: 334..481
coord: 16..191
coord: 177..333
coord: 441..510

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig106contigD-herbacea_F_contig106:810091..829656 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig106.637.1mRNA_D-herbacea_F_contig106.637.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig106 807473..830942 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig106.637.1 ID=prot_D-herbacea_F_contig106.637.1|Name=mRNA_D-herbacea_F_contig106.637.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=758bp
MLQALEEGPKNAIVCTIAVNQLGRMGKWREAVELLDGMGKGGDGSDRPDA
FVYAAAITACGKAGRPVEAVALLTEMPSRRVEPDVVCFGAAISALGEVAA
GQSTSTWGVKPESTYKNASDGDDGGVAGGTKAIVPTRAHEKAVALIQQMR
RDGPSPNQQCFASAITACARALDPRAALELLRTMREDDVAPNEVVLNAAI
DACGKGGAPDEAVRLLHGMENAYGIKPSTITYNSAISALSRAGRARDARA
LLDEMSERGVRPDKVSFSAAMQGFASAGDPRNAAALSEEMKTSGVEMDVV
SYGTAVSACAKAGDVRGALKLIKEMQEAGVEANTIVYNAALDACGRSGKP
KVASKLLRKMKESGVVPNATSYTGAIAACSKAGDGDQALDWLKVMFEEGI
APEVICYNYAMAACGRSGNDGQAEWLLMEMRKQGVTPNRISYSAAMFALG
KAGRLSDVLDLLGEMNREGLEADEVTYHIAIDAASIAGNLSVAMDLFREM
RQRGLPVTKRRVEYIRDKVSGNGNSQKTKPRPRKTPATTTVSSRDLEALS
ETEPSLSSGGAMAAKTTTTKKVSRGAIHGSKRGGRGAMEEDNEGEGEEEA
GADFLAELRDRFAPSDDELASEEDLALAEDGILFGEEKDEVKVEVEVEEM
AGTAPVVVGGGRGDSDLELDASDISRSEAKMPPAVVVVGEREGELTTGDG
EATGVTPSTSVTLLLEDVKTMKATELKAELRGRGLRLSGNKAELAARLEE
ALQETAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033443PPR_long
IPR036361SAP_dom_sf
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
IPR003034SAP_dom