prot_D-herbacea_F_contig106.629.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig106.629.1
Unique Nameprot_D-herbacea_F_contig106.629.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length725
Homology
BLAST of mRNA_D-herbacea_F_contig106.629.1 vs. uniprot
Match: A0A6H5KP28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP28_9PHAE)

HSP 1 Score: 774 bits (1998), Expect = 7.980e-258
Identity = 426/729 (58.44%), Postives = 516/729 (70.78%), Query Frame = 0
Query:    3 MAPEMWEWGGPEVETLRPRRRSNSRDEEMGEDNDGGARGLPLPPPMPLWAEHGKVESGGGIHIXXXXXXXXXXELKVMLSTFRSDKQPPCRVRVSFILDSHSPSDFGARSETYEVLKQLLRVPQAAERESFGEFGCMTHSGVLDKTQILFDFHVKGPSLPTGKRNSLVLFFNDILPIKIARGEAVEPDVVYLLDADTGHPDNGMADVECMWRLLMSEEETACLTCPVRPVNSLESFLAASQSLEYAQVWDNVGESFYAIQTTARGAQVMLKYRCIVEDGRLAQPPCGEGAMPPLLDAFSKTAAGMPAMILLDTSPSEGLLVLLRQRGFDVRSCGVADAVTCVPNSWLEFYAQRRRWYAGSIVGVLSNLTGKESYFQTQRNRWIAAAYAFLFNVYLHSSLAFLPVLLAKGLASWSLHLDSHVD-----------------DDNHDLGTRVEWIVFGLLWAFLGLNVVLYTNRSHKQLWMWINVSSLVWMLLCGVVLVGASMAVSPYVVVAVVLTPFVVGGLNSAGASLVSWASFAVSAVPYVLVFSVHSVLVFLFAMATLDSTLWGTRDVSSFDSGVTKTRKVAMRRRRLLILALVMGVSAGVGVMLMLFPVYTLLPIVVGIPAAANVLKLLVSIIPSKLERQRQSIFLGNADGLRPLSLRRGMTELAPIHGRSQDSRAEQMAS---RGGRGNRKSALTKSPTENGSFVTAEDGTPSPGSG--SASGSFF 709
            M   MWEW GPE E L                     RG+PLP   PLW EHGK + GGGIHI          ELKVMLSTFR D    C VR+SF+LD   P+   A SET +VLK+LLRV   +  E FG   C+ HSG LDKT I FD +VKGPSLP GKRNSLV FFNDILP+K++RGEAVEPD VYLLDAD+GHP NG+ D+E MWRLLM+EEE AC+TCPVRPV+ + SFLAASQSLE+A +WDNVGES + +QTT RGAQ M KYRC+VEDGRLA+PP GEGAMPPLL+ FSKTAAG+PA+ILLD+SPSEGLLVLLRQRGFDVRSCG AD VTCVP SW+EFYAQRRRWYAGS+V V S+LTGKESYFQ + +RWI ++YAF+ N++LHS LA +PVLLAKGL    L+ +S  +                 DD  D  T ++WIVF L+W F  LNV  Y  RS  QLWMWINV+S++WMLLCG  LVG+  AVSP + V +V+ P V+ GLN+A  ++ +W    V+AVP+VL+ +V+SVLVFL+A+ATLDST WGTRDV SFDSGV+K R  +MRRR+L IL   M  S  +GV++M+      LPIV+GIP+AA +LKLL+ ++P+KLER RQ+  LG+  G RPLSLR  + ELAPI+G   +   ++ +     GG   +K    KSP + GS VTAEDGTPSPG    S SGSFF
Sbjct:    1 MTETMWEWDGPESERLXX------XXXXXXXXXXXXXRGMPLPLMSPLWREHGKGQGGGGIHIVVCCCNETQEELKVMLSTFRIDATASCLVRISFVLDPRGPAQ--ASSETDKVLKRLLRVTDESATEVFG---CIHHSGTLDKTLIPFDLYVKGPSLPVGKRNSLVTFFNDILPVKMSRGEAVEPDAVYLLDADSGHPVNGLQDLESMWRLLMAEEEVACVTCPVRPVHPMGSFLAASQSLEFA-LWDNVGESHFGVQTTCRGAQCMFKYRCLVEDGRLAEPPIGEGAMPPLLNPFSKTAAGLPALILLDSSPSEGLLVLLRQRGFDVRSCGTADGVTCVPCSWIEFYAQRRRWYAGSLVAVSSHLTGKESYFQAEWHRWIISSYAFVANLFLHSGLALMPVLLAKGLHQLVLYDESRGESDDDWNDEWSEWQEESADDGIDQHTNLDWIVFALVWGFFLLNVGFYLTRSQDQLWMWINVTSVLWMLLCGGTLVGSGFAVSPLIPVMLVIIPPVLAGLNTARGTIATWRYLCVAAVPFVLLTTVNSVLVFLYALATLDSTEWGTRDVGSFDSGVSKPRAASMRRRKLCILFTTMATSCALGVVMMISSSLIFLPIVIGIPSAAYLLKLLLVVVPAKLERSRQTYLLGDV-GSRPLSLRGSVAELAPINGCPPEFSTDRHSGGDRNGGGIGQKGLGPKSPAKTGSHVTAEDGTPSPGGMDVSTSGSFF 716          
BLAST of mRNA_D-herbacea_F_contig106.629.1 vs. uniprot
Match: D8LBH7_ECTSI (Chitin synthase 1, chs-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBH7_ECTSI)

HSP 1 Score: 587 bits (1512), Expect = 4.190e-202
Identity = 300/475 (63.16%), Postives = 354/475 (74.53%), Query Frame = 0
Query:    3 MAPEMWEWGGPEVETLRPRRRSNSRDEEMGEDNDGGARGLPLPPPMPLWAEHGKVESGGGIHIXXXXXXXXXXELKVMLSTFRSDKQPPCRVRVSFILDSHSPSDFGARSETYEVLKQLLRVPQAAERESFGEFGCMTHSGVLDKTQILFDFHVKGPSLPTGKRNSLVLFFNDILPIKIARGEAVEPDVVYLLDADTGHPDNGMADVECMWRLLMSEEETACLTCPVRPVNSLESFLAASQSLEYAQVWDNVGESFYAIQTTARGAQVMLKYRCIVEDGRLAQPPCGEGAMPPLLDAFSKTAAGMPAMILLDTSPSEGLLVLLRQRGFDVRSCGVADAVTCVPNSWLEFYAQRRRWYAGSIVGVLSNLTGKESYFQTQRNRWIAAAYAFLFNVYLHSSLAFLPVLLAKGLA------------------SWSLHLDSHVDDDNHDLGTRVEWIVFGLLWAFLGLNVVLYTNRSHK 459
            MA  MWEW GPE E LRPR R+NS      +++D G RG+PLPP  PLW EHGK + GGGIHI          ELKVMLSTFR+D    C VR+SF+L+    ++  A SET EVLK+LLRV   +  E  G   C+ HSG LDKT I FD +VKGPSLP GKRNSLV FFNDILP+K++RGEAVEPDVVYLLDAD+GHP NG+ D+E MWRLLM+EEE AC+TCPVRPV+ +ESFLAASQSLE+A +WDNVGES + +QTT RGAQ M KYRC+VEDGRLAQPP GEGAMPPLL++FSKTAAG+PA+ILLD+SP+EGLLVLLRQRGFDVRSCG AD VTCVP SW+E YAQRRRWYAGS+V V S+LTGKESYFQ + +RWI ++YAF+ NV+LHS LA +PVLLAKG+                    WS   +   DDD  D  T ++WIVF L+W FL LNV +Y  RS +
Sbjct:    1 MAETMWEWDGPESERLRPRARNNS------DEDDDGERGMPLPPMSPLWREHGKGQGGGGIHIVVCCCNETQEELKVMLSTFRTDATASCPVRISFVLEPRGAAE--ASSETDEVLKRLLRVTDESATEVSG---CIHHSGTLDKTLIPFDLYVKGPSLPVGKRNSLVTFFNDILPVKMSRGEAVEPDVVYLLDADSGHPVNGLEDLESMWRLLMAEEEVACVTCPVRPVHPMESFLAASQSLEFA-LWDNVGESHFGVQTTCRGAQCMFKYRCLVEDGRLAQPPVGEGAMPPLLNSFSKTAAGLPALILLDSSPNEGLLVLLRQRGFDVRSCGTADGVTCVPCSWIELYAQRRRWYAGSLVAVSSHLTGKESYFQAEWHRWIISSYAFVANVFLHSGLALMPVLLAKGIHRLVLYDESRGESDDEWNNEWSAWQEESADDDI-DRHTNLDWIVFALVWGFLLLNVGVYLTRSQE 462          
BLAST of mRNA_D-herbacea_F_contig106.629.1 vs. uniprot
Match: F0XZN2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZN2_AURAN)

HSP 1 Score: 92.4 bits (228), Expect = 2.040e-15
Identity = 82/317 (25.87%), Postives = 142/317 (44.79%), Query Frame = 0
Query:   76 ELKVMLSTFR-----SDKQPPCRVRVSFILDSHSPSDFGARSETYEVLKQLLRVPQAAERESFGEFGCMTHSGVLDKTQILFDFH--------------------VKGPSLPTGKRNSLVLFFNDILPIKIARGEAVEPDVVYLLDADTGHPDNGMADVECMWRLLMSEEETACLTCPVRPVN-SLESFLAASQSLEYAQVWDNVGE-SFYAIQTTARGAQVMLKYRCIVEDGRLAQPPCGEGAMPPLLDAFSKTAAGMPAMILLDTSPSEGLLVLLRQRGFDVRSCGVADAVTCVPNSWLEFYAQRRRWYAGSIVG 365
            E++ M++T+R      +  PP  + +SF++D  +  +    S +   L + L +  AA  ++   FGC  + G +  +    DF                     VK  +LP GKR S              R     P  ++  D DTG  D G+ADVE ++ LL+ +++T  +    RP   S   +L  +Q LEY +++  +G  S++     A G  VM ++  +  DG +      EG    +L+ +  T+  +  +++LD     G+ + + Q G       +    TCVP +W +++ QRRRWY G +VG
Sbjct: 1897 EIETMMATWRIAGPRPETLPP--LHLSFVVDGSTDPE--NPSHSLLALCRCLGIDAAAPADA-DLFGCRRYEGEMRASAGASDFSGDREETKEEGALKTYPFEVWVKNGALPRGKRISFARASR-------RRSCTTPPTAIHFQDGDTGS-DRGLADVEKLFLLLLEDDDTGVVCSKTRPAQYSPWVWLLRTQQLEYLEMFGGLGGFSWFRSVGCAVGMSVMYRWTAL-RDGVVH-----EGMT--VLEKYVSTSRSIVDLVMLDMVEDYGMTMYILQSGAGSVMSHLTHFRTCVPETWCDYFGQRRRWYTGGLVG 2192          
BLAST of mRNA_D-herbacea_F_contig106.629.1 vs. uniprot
Match: A0A8J2PZC0_9BILA (Chitin synthase n=1 Tax=Cercopithifilaria johnstoni TaxID=2874296 RepID=A0A8J2PZC0_9BILA)

HSP 1 Score: 57.8 bits (138), Expect = 8.540e-5
Identity = 48/198 (24.24%), Postives = 79/198 (39.90%), Query Frame = 0
Query:  187 VEPDVVYLLDADTGHPDNGMADVECMWRLLMSEEETACLTCPVRPVNSLESFLAASQSLEYA--QVWDNVGESFYAIQTTARGAQVMLKYRCIVEDGRLAQPPCGEGAMPPLLDAFSKTAAGMPAMILLDTSPSEGLLVLLRQRGFDVRSCGVADAVTCVPNSWLEFYAQRRRWYAGSIVGVLSNLTGKESYFQTQRN 382
            +E D  Y+L  D G      + V  + RL+  + E  C    + P+   +  +   Q  EYA    +    E  +     A G   + +   +++D               ++  ++KTA+     +  D      L  LL ++G+ +    VADA T  P S+ EF+ QRRRW   SI   L  L   +   Q+  N
Sbjct:  653 LEADNTYILAID-GDSKFEPSAVMKLLRLMNVKNEIGCACGRIHPIG--KGIMIWYQKFEYAISHWFQKAAEHVFGCVLCAPGCFSLFRASALMDDN--------------VMHKYTKTASEPRHFVQYDQGEDRWLSTLLLKQGYRIEYAAVADAETYAPESFHEFFNQRRRWTPSSIANTLDLLADYKRVCQSNNN 833          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig106.629.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KP28_9PHAE7.980e-25858.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBH7_ECTSI4.190e-20263.16Chitin synthase 1, chs-1 n=1 Tax=Ectocarpus silicu... [more]
F0XZN2_AURAN2.040e-1525.87Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8J2PZC0_9BILA8.540e-524.24Chitin synthase n=1 Tax=Cercopithifilaria johnston... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004835Chitin synthasePANTHERPTHR22914CHITIN SYNTHASEcoord: 28..556
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 484..489
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 490..516
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 456..460
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 574..594
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 595..599
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 522..542
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 436..455
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 461..483
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 543..573
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 409..435
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..383
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 384..408
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 600..620
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 621..725
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 517..521
NoneNo IPR availableTMHMMTMhelixcoord: 600..622
NoneNo IPR availableTMHMMTMhelixcoord: 491..513
NoneNo IPR availableTMHMMTMhelixcoord: 430..452
NoneNo IPR availableTMHMMTMhelixcoord: 462..484
NoneNo IPR availableTMHMMTMhelixcoord: 518..540
NoneNo IPR availableTMHMMTMhelixcoord: 387..409
NoneNo IPR availableTMHMMTMhelixcoord: 574..596

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig106contigD-herbacea_F_contig106:607927..628312 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig106.629.1mRNA_D-herbacea_F_contig106.629.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig106 607629..628312 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig106.629.1 ID=prot_D-herbacea_F_contig106.629.1|Name=mRNA_D-herbacea_F_contig106.629.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=725bp
MAMAPEMWEWGGPEVETLRPRRRSNSRDEEMGEDNDGGARGLPLPPPMPL
WAEHGKVESGGGIHIVVCCCNEEEEELKVMLSTFRSDKQPPCRVRVSFIL
DSHSPSDFGARSETYEVLKQLLRVPQAAERESFGEFGCMTHSGVLDKTQI
LFDFHVKGPSLPTGKRNSLVLFFNDILPIKIARGEAVEPDVVYLLDADTG
HPDNGMADVECMWRLLMSEEETACLTCPVRPVNSLESFLAASQSLEYAQV
WDNVGESFYAIQTTARGAQVMLKYRCIVEDGRLAQPPCGEGAMPPLLDAF
SKTAAGMPAMILLDTSPSEGLLVLLRQRGFDVRSCGVADAVTCVPNSWLE
FYAQRRRWYAGSIVGVLSNLTGKESYFQTQRNRWIAAAYAFLFNVYLHSS
LAFLPVLLAKGLASWSLHLDSHVDDDNHDLGTRVEWIVFGLLWAFLGLNV
VLYTNRSHKQLWMWINVSSLVWMLLCGVVLVGASMAVSPYVVVAVVLTPF
VVGGLNSAGASLVSWASFAVSAVPYVLVFSVHSVLVFLFAMATLDSTLWG
TRDVSSFDSGVTKTRKVAMRRRRLLILALVMGVSAGVGVMLMLFPVYTLL
PIVVGIPAAANVLKLLVSIIPSKLERQRQSIFLGNADGLRPLSLRRGMTE
LAPIHGRSQDSRAEQMASRGGRGNRKSALTKSPTENGSFVTAEDGTPSPG
SGSASGSFFPFPAANAFGGNNGNGS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004835Chitin_synth