prot_D-herbacea_F_contig106.622.1 (polypeptide) Desmarestia herbacea DmunF female
|
Overview
Homology
BLAST of mRNA_D-herbacea_F_contig106.622.1 vs. uniprot
Match: D8LBI3_ECTSI (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI3_ECTSI) HSP 1 Score: 478 bits (1229), Expect = 1.620e-161 Identity = 268/372 (72.04%), Postives = 307/372 (82.53%), Query Frame = 0
Query: 123 FTKSEMLAARQARKASXXXXXXXXXXXXXTKAAEAARLGKGAXXXXXXXXXXXXXGAKSGERGKWGWGSKALAGSATGIAILGVAWQLKPDEVRRLLDDSPIDHLAVWAMGKYQLYSSPVKDKLLPDFPVPPGAPTPPVLVLDLEGTLLGTIYTRKNGWRVAKRPGLDEFLKEMAQLYEIVVFTDSFGGLAEEWITKMDPDNMYISHRLYRDGTRFVDGKYVKDLTSLNRPLEQLVIVDDNDDCISMQPENALKVPMFSLEEGSDPTADTVLYELAPFLRALAMQGVADYRNVLRPHIGEDYSAVVSDFRSKVNSVRHKEETERARGLGGLVRQIAPAVGSSGLSAG--GMMTSKDIVGDAPDKLSPAMAAA 492
FTKSEMLAAR+ARKAS XXXXXX XXXXXXXXXXXXX WGWG+K +AG++ G+A LG+AWQLKPDE+R+LLDDSPIDH +W MGK+ LYSSPVKDKLL D P+PPGA PP LVLDLEGTLLGTIYTRK GWRVAKRPGLD FLKEM+QLYEIVVFTDS GGLA+EWIT+MDP IS R+YRDGTR++DGKYVKDL++LNRPLEQ +I+DDN DCISMQPENA+KV FSLE+GSDPTADT LY+LAPFLRALA QGVAD+R+VLRPH+GED +AVV+DFRSKVN+VR KE+ E+++GLGGLVRQIAP VG+ G +AG GM+TSKDIVGDAP+ LSP MAAA
Sbjct: 107 FTKSEMLAARKARKASVTAKTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXWGWGTKLVAGTSVGLAALGIAWQLKPDEMRKLLDDSPIDHFFIWFMGKWALYSSPVKDKLLLDCPLPPGALPPPTLVLDLEGTLLGTIYTRKKGWRVAKRPGLDAFLKEMSQLYEIVVFTDSMGGLADEWITQMDPQGT-ISQRVYRDGTRYIDGKYVKDLSALNRPLEQTLIIDDNADCISMQPENAIKVKAFSLEDGSDPTADTALYDLAPFLRALATQGVADFRDVLRPHVGEDSNAVVADFRSKVNAVRQKEDAEKSKGLGGLVRQIAPVVGAGGPAAGMGGMLTSKDIVGDAPETLSPGMAAA 475
BLAST of mRNA_D-herbacea_F_contig106.622.1 vs. uniprot
Match: A0A835YRZ2_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ2_9STRA) HSP 1 Score: 234 bits (596), Expect = 1.160e-67 Identity = 128/307 (41.69%), Postives = 190/307 (61.89%), Query Frame = 0
Query: 201 IAILG---VAWQLKPDEVRRLLDDSPIDHLAVWAMGKY----QLYSSPVKDKLLPDFP---VPPGAPTPPVLVLDLEGTLLGTIYTRKNGWRVAKRPGLDEFLKEMAQLYEIVVFTDSFGGLAEEWITKMDP----------DNMYISHRLYRDGTRFVDGKYVKDLTSLNRPLEQLVIVDDNDDCISMQPENALKVPMFSLEEGSDPTADTVLYELAPFLRALAMQGVADYRNVLRPHIGEDYSAVVSDFRSKVNSVRHKEETERARGLGGLVR-----QIAPAVGSSGLSAGGMMTSKDIVGDAP 482
+A++G +AW+L D++ L SP+ W + + ++ P DKLLPD+P +PP P PP LVLDLE TL+ + R+ GWRVA+RPG++EFL+EM+ YEIV+FT + G AE +T +DP + Y SHRLYRD T F +G +VKDL+ +NR ++ ++I+DD + +QP+N +++ + ++ G DP ADT L +L PFLRALAM+GV DYRNVLRP G+D AVV+++R +V++ + GLGGL+R + P + SA + +S+D+VG AP
Sbjct: 93 LAVIGGGALAWRLWHDDIAALYRRSPLHAAGRWVNAQLAEIARPFTEPSSDKLLPDWPPSELPPDTPCPPTLVLDLENTLVHMDWHRRTGWRVARRPGVEEFLREMSMYYEIVIFTSAHVGSAEPIVTSLDPAVSRARGVEVSSGYTSHRLYRDATLFSNGTHVKDLSKINRDMKHVIIIDDEPEAFQLQPDNGIRIKPYEIKPGEDPHADTALTDLIPFLRALAMEGVRDYRNVLRPFRGQDSDAVVAEYRRRVDAANAAQRERDNSGLGGLLRGAKRGHLVPDAQPTRRSA--IPSSRDLVGAAP 397
BLAST of mRNA_D-herbacea_F_contig106.622.1 vs. uniprot
Match: A0A7S2GPP0_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GPP0_9STRA) HSP 1 Score: 180 bits (456), Expect = 8.100e-48 Identity = 90/224 (40.18%), Postives = 148/224 (66.07%), Query Frame = 0
Query: 238 YSSPVKDKLLPDFP----VPPGAPTPPVLVLDLEGTLLGTIYTRKNGWRVAKRPGLDEFLKEMAQLYEIVVFTDSFGGLAEEWITKMDPDNMYISHRLYRDGTRFVDGKYVKDLTSLNRPLEQLVIVDDNDDCISMQPENALKVPMFSLEEGSDPTADTVLYELAPFLRALAMQGVADYRNVLRPHIGEDYSAVVSDFRSKVNSVRHKEETERARGLGGLVRQI 457
++ P++ KLLPD+P +P P PP LVLDLEGTL+ + + R++GWR AKRPG+D+FL++MAQ YEIV+F+++ + E + +DP+N+ H+L R+ TR+ +G Y+KDL+ LNR L+++VI+DD++ S+QPEN + + F + DT L+++ FL AL +GV D+ +L + + +++ SK+ +++ +EE R RGLG LV+ +
Sbjct: 113 FTEPIRQKLLPDWPFFPNIPADTPCPPTLVLDLEGTLVKSTWDRRHGWRHAKRPGVDKFLQDMAQYYEIVLFSNNTASIVEPIMMSLDPENV-CWHKLTREATRYENGVYIKDLSHLNRSLKKMVIIDDDEQAFSLQPENGIHINAFKNARDKN---DTSLHDIGKFLAALVHEGVEDFPALLSTFKSRNAEDISNEYLSKLRTIKDREEENRNRGLGRLVKSL 332
BLAST of mRNA_D-herbacea_F_contig106.622.1 vs. uniprot
Match: F0WSY2_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WSY2_9STRA) HSP 1 Score: 177 bits (449), Expect = 2.290e-47 Identity = 110/279 (39.43%), Postives = 166/279 (59.50%), Query Frame = 0
Query: 191 SKALAGSATGIAILGVAWQLKPDE-----VRRLLDDSPIDHLAVWAMGKYQLYSSPVKD----KLLPDFP---VPPGAPTPPVLVLDLEGTLLGTIYTRKNGWRVAKRPGLDEFLKEMAQLYEIVVFTDSFGGLAEEWITKMDPDNMYISHRLYRDGTRFVDGKYVKDLTSLNRPLEQLVIVDDNDDCISMQPENALKVPMFSLEEGSDPTADTVLYELAPFLRALAMQGVADYRNVLRPHIGEDYSA--VVSDFRSKVNSVRHKEETERARGLGGLVR 455
SK G G + W DE VR L+ +P+ L ++ GK + P+ D KLLPD+P VPP P PVLVLDLE TL+ + ++RK+GWR AKRPG+DEFL+ + Q YEIV+F++++ +AEE + K+DP + H L RD TR+++G VKDL+ LNR L+Q+V++DD+ +QPENA+ + F+ D D L +L PFL+ALA + V+D+R VL ED + + S + +++ + ++E + +G GG +R
Sbjct: 80 SKISLGLIIGSISGSIVWFYLLDENVKTKVRHQLNQTPLGELYRFSAGKVAEWIRPITDPSRSKLLPDWPIPQVPPNTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQFYEIVIFSENY--MAEEIVMKLDPKQCVL-HVLSRDATRYLNGSRVKDLSKLNRDLKQVVLLDDDPAAYQLQPENAVPIKPFANARDRD---DHELRDLIPFLKALASERVSDFRQVLAEFRDEDGALRDLPSKYGARLYQLEKEKEQAKQKGFGGFIR 352
BLAST of mRNA_D-herbacea_F_contig106.622.1 vs. uniprot
Match: A0A7S2WSD5_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSD5_9STRA) HSP 1 Score: 178 bits (451), Expect = 4.850e-47 Identity = 102/282 (36.17%), Postives = 164/282 (58.16%), Query Frame = 0
Query: 187 WGWGSKALAGSATGIAILGVAWQLKPDEVRRLLDDSPIDHLAV-WAMGKYQLYSSPV----KDKLLPDFP----VPPGAPTPPVLVLDLEGTLLGTIYTRKNGWRVAKRPGLDEFLKEMAQLYEIVVFTDSFGGLAEEWITKMDPDNMYISHRLYRDGTRFVDGKYVKDLTSLNRPLEQLVIVDDNDDCISMQPENALKVPMFSLEEGSDPTADTVLYELAPFLRALAMQGVADYRNVLRPHIGEDYSAVVSDFRSKVNSVRHKEETERARGLGGLVRQIAP 459
WGW AL G G+ ++ A P + + ++ A W + + + S+P+ KLLPD+P +PP P PP LV+D+EGTL + + K GWR AKRPG D F+KEMA+ YE+V F+++ G+ + + +D D H+L+R+ T F G YVKDL+ LNR +++++++DD+ QPENA+++ ++ D DTVL +L PFL A+ +GV D+ VLR +D + + + + ++SV+ ++E RGLGGL+R ++P
Sbjct: 66 WGW--LALGGVTGGVGLISFA--ASPYGRETAVGKAIVESYAWRWLVLQLETMSAPLFKPAYTKLLPDWPYFPNIPPDVPCPPTLVIDVEGTLCTSTWDPKYGWRHAKRPGADRFIKEMARYYELVFFSNNIAGVGDPIMASLDKD-FVTPHKLFRESTTFHQGAYVKDLSHLNRDMKKVLLIDDDPLAFQFQPENAIQIKPYTDAYDRD---DTVLEDLIPFLAAMVNEGVTDFPAVLRNFRSKDAGEIANSYSNLLSSVKQRQEEATTRGLGGLLRNLSP 339
BLAST of mRNA_D-herbacea_F_contig106.622.1 vs. uniprot
Match: A0A5D6YBW0_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YBW0_9STRA) HSP 1 Score: 176 bits (446), Expect = 5.910e-47 Identity = 117/294 (39.80%), Postives = 169/294 (57.48%), Query Frame = 0
Query: 194 LAGSATGIAILGVAWQLKPDEVRR-----LLDDSPIDHLAVWAMGK----YQLYSSPVKDKLLPDFPVP---PGAPTPPVLVLDLEGTLLGTIYTRKNGWRVAKRPGLDEFLKEMAQLYEIVVFTDSFGGLAEEWITKMDPDNMYISHRLYRDGTRFVDGKYVKDLTSLNRPLEQLVIVDDNDDCISMQPENALKVPMFSLEEGSDPTADTVLYELAPFLRALAMQGVADYRNVLRPHIGEDYSAVVSD----FRSKVNSVRHKEETERARGLGGLVRQIAPAVGSSGLSAGGM 471
LAGS +G + W D+ + L + + + A K ++ ++ P ++KLLPD+PVP P P PVLVLDLE TL+ + ++RK+GWR AKRPG+DEFL+ + Q YEIV+F+ + LAEE + K+DP + H L RD TR+ G +VKDL +LNR L Q+VIVDD+ +QPENA+ + F+ D D L +L PFL+ALA++ V D+R VL ED VV D + ++V ++ ++E ER +GLGG +R G + GM
Sbjct: 84 LAGSVSGSVL----WHFLLDDATKKSVADTLGGTVLGDVYALAAAKVEDLFRPFTDPSREKLLPDWPVPDVPPDMPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQYYEIVIFSQN--PLAEEVVMKLDPKRCAM-HILSRDATRYYKGVHVKDLANLNRDLRQVVIVDDDPAAYQLQPENAIPIQPFTNGRDRD---DRELADLIPFLKALALERVPDFRVVLDEFRDED--GVVRDLPSRYSARVRAIEMQKEQERQKGLGGFIRGRLSQRSPPGFAGAGM 365
BLAST of mRNA_D-herbacea_F_contig106.622.1 vs. uniprot
Match: A0A3R7KV46_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KV46_9STRA) HSP 1 Score: 176 bits (446), Expect = 8.910e-47 Identity = 108/244 (44.26%), Postives = 156/244 (63.93%), Query Frame = 0
Query: 238 YSSPVKDKLLPDFP---VPPGAPTPPVLVLDLEGTLLGTIYTRKNGWRVAKRPGLDEFLKEMAQLYEIVVFTDSFGGLAEEWITKMDPDNMYISHRLYRDGTRFVDGKYVKDLTSLNRPLEQLVIVDDNDDCISMQPENALKVPMFSLEEGSDPTADTVLYELAPFLRALAMQGVADYRNVLRPHIGEDYSAVVSDFRSK----VNSVRHKEETERARGLGGLVR---QIAPAVGSSGLSAGGM 471
++ P + KLLPD+P VP P PVLVLDLE TL+ + ++RK+GWR AKRPG+DEFL+ + Q YEIV+F+ ++G AEE + K+DP + H L RD TR+++G +VKDL+SLNR L+Q+VI+DD+ +QPENA+ V F+ D D L +L PFL+ALA + V D+RNV+ ED VV D SK V+ + +++ ++ +G GG VR P+ G++AGG+
Sbjct: 141 FTDPSRLKLLPDWPIPQVPADTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQYYEIVIFSQNYG--AEEIVQKLDPKQCAL-HILSRDATRYLNGAHVKDLSSLNRDLQQVVILDDDPAAYQLQPENAIPVKPFTNGRDRD---DHELKDLIPFLKALASERVPDFRNVIGEFRDED--GVVRDLASKYGARVHQLEMQKQQQKKKGFGGFVRGRLSHHPSSSQGGVAAGGI 376
BLAST of mRNA_D-herbacea_F_contig106.622.1 vs. uniprot
Match: A0A7S1G064_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G064_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.660e-46 Identity = 102/259 (39.38%), Postives = 157/259 (60.62%), Query Frame = 0
Query: 238 YSSPVKDKLLPDFP---VPPGAPTPPVLVLDLEGTLLGTIYTRKNGWRVAKRPGLDEFLKEMAQLYEIVVFTDSFGGLAEEWITKMDPDNMYISHRLYRDGTRFVDGKYVKDLTSLNRPLEQLVIVDDNDDCISMQPENALKVPMFSLEEGSDPT--ADTVLYELAPFLRALAMQGVADYRNVLRPHIGEDYSAVVSDFRSKVNSVRHKEETERARGLGGLVR---------QIAPAVGSSGLSAGGMMTSKDIVGDAP 482
++ P DKLLPD+P VPP P P LVLDLE TL+ + + RK+GWR AKRPG+D+FL++MAQ YEIV++T + G+AE I +D I H LYR+ TRF+DG +VKDL+SLNR +++++ +D+++ + + P+N ++V ++ DP D L ++ P L + +G D +LR + G D +V ++S+V+ +R + + GLG L + ++ PA S S +TSKD+VGDAP
Sbjct: 152 FTKPHADKLLPDWPMPNVPPDLPCPHTLVLDLENTLVSSTWDRKHGWRHAKRPGVDQFLRKMAQYYEIVLYTSTIQGVAEPVIQNLDKQQA-IMHALYRESTRFIDGVHVKDLSSLNRNVKKIIAIDNDEKALQLHPDNLIRVKPYT-----DPRNRTDDTLEKIMPILIEIVNKGYDDIPAILRQYRGMDADEIVEHYQSRVDEIRKNRDQIYSSGLGWLNQRRNNPMPEPELPPASSSMRPSGTPAITSKDLVGDAP 404
BLAST of mRNA_D-herbacea_F_contig106.622.1 vs. uniprot
Match: A0A8K1FDJ8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDJ8_PYTOL) HSP 1 Score: 174 bits (442), Expect = 2.780e-46 Identity = 102/225 (45.33%), Postives = 147/225 (65.33%), Query Frame = 0
Query: 238 YSSPVKDKLLPDFP---VPPGAPTPPVLVLDLEGTLLGTIYTRKNGWRVAKRPGLDEFLKEMAQLYEIVVFTDSFGGLAEEWITKMDPDNMYISHRLYRDGTRFVDGKYVKDLTSLNRPLEQLVIVDDNDDCISMQPENALKVPMFSLEEGSDPTADTVLYELAPFLRALAMQGVADYRNVLRPHIGEDYSAVVSDFRSK----VNSVRHKEETERARGLGGLVR 455
Y+ P K+KLLPD+P VPP P PVLVLDLE TL+ + ++RK+GWR AKRPG+DEFL+ +AQ YEIVVF+ + +AEE + K+D + H L R+ TR+ + +VKDL+ LNR L Q+VI+DD+ +QP+NA +P+ + +G D D L +L PFL+ALA + V D+R+VL ED V+ D +K V ++ ++E E+ +GLGG +R
Sbjct: 143 YTEPSKEKLLPDWPIPQVPPDTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLEALAQYYEIVVFSQNHMYMAEEILVKLDR-KQNVLHLLARESTRYFNSAHVKDLSKLNRDLRQVVIIDDDPSAYQLQPDNA--IPIKAYTDGRD-RGDHELKDLIPFLKALASERVGDFRSVLAEFRDED--GVIRDLPTKYGARVRALEMQKEQEKQKGLGGFIR 361
BLAST of mRNA_D-herbacea_F_contig106.622.1 vs. uniprot
Match: A0A662Y4U5_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y4U5_9STRA) HSP 1 Score: 174 bits (441), Expect = 5.530e-46 Identity = 100/223 (44.84%), Postives = 149/223 (66.82%), Query Frame = 0
Query: 238 YSSPVKDKLLPDFP---VPPGAPTPPVLVLDLEGTLLGTIYTRKNGWRVAKRPGLDEFLKEMAQLYEIVVFTDSFGGLAEEWITKMDPDNMYISHRLYRDGTRFVDGKYVKDLTSLNRPLEQLVIVDDNDDCISMQPENALKVPMFSLEEGSDPTADTVLYELAPFLRALAMQGVADYRNVLRPHIGED--YSAVVSDFRSKVNSVRHKEETERARGLGGLVR 455
++ P + KLLPD+P VP P PVLVLDLE TL+ + ++RK+GWR AKRPG+DEFL+ + Q YEIV+F+ ++G AEE +TK+DP + H L RD TR+++G +VKDL +LNR L Q+VI+DD+ +QPENA+ + F+ +G D D L +L PFL+ALA + V D+R+V+ +D V S + ++V+++ ++E E+ +G GG VR
Sbjct: 152 FTDPSRQKLLPDWPIPQVPADTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQYYEIVIFSQNYG--AEEIVTKLDPKQCAL-HCLSRDSTRYLNGAHVKDLANLNRDLRQVVILDDDPAAYQLQPENAIPIKPFT--DGRD-REDHELKDLIPFLKALASERVPDFRSVIGEFRDDDGVIRDVASKYGARVHAMEMQKEQEKRKGFGGFVR 368 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig106.622.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_D-herbacea_F_contig106.622.1 ID=prot_D-herbacea_F_contig106.622.1|Name=mRNA_D-herbacea_F_contig106.622.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=494bpback to top |