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Homology
BLAST of mRNA_D-herbacea_F_contig106.622.1 vs. uniprot
Match: D8LBI3_ECTSI (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI3_ECTSI) HSP 1 Score: 478 bits (1229), Expect = 1.620e-161 Identity = 268/372 (72.04%), Postives = 307/372 (82.53%), Query Frame = 1
Query: 367 FTKSEMLAARQARKASXXXXXXXXXXXXXTKAAEAARLGKGAXXXXXXXXXXXXXGAKSGERGKWGWGSKALAGSATGIAILGVAWQLKPDEVRRLLDDSPIDHLAVWAMGKYQLYSSPVKDKLLPDFPVPPGAPTPPVLVLDLEGTLLGTIYTRKNGWRVAKRPGLDEFLKEMAQLYEIVVFTDSFGGLAEEWITKMDPDNMYISHRLYRDGTRFVDGKYVKDLTSLNRPLEQLVIVDDNDDCISMQPENALKVPMFSLEEGSDPTADTVLYELAPFLRALAMQGVADYRNVLRPHIGEDYSAVVSDFRSKVNSVRHKEETERARGLGGLVRQIAPAVGSSGLSAG--GMMTSKDIVGDAPDKLSPAMAAA 1476
FTKSEMLAAR+ARKAS XXXXXX XXXXXXXXXXXXX WGWG+K +AG++ G+A LG+AWQLKPDE+R+LLDDSPIDH +W MGK+ LYSSPVKDKLL D P+PPGA PP LVLDLEGTLLGTIYTRK GWRVAKRPGLD FLKEM+QLYEIVVFTDS GGLA+EWIT+MDP IS R+YRDGTR++DGKYVKDL++LNRPLEQ +I+DDN DCISMQPENA+KV FSLE+GSDPTADT LY+LAPFLRALA QGVAD+R+VLRPH+GED +AVV+DFRSKVN+VR KE+ E+++GLGGLVRQIAP VG+ G +AG GM+TSKDIVGDAP+ LSP MAAA
Sbjct: 107 FTKSEMLAARKARKASVTAKTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXWGWGTKLVAGTSVGLAALGIAWQLKPDEMRKLLDDSPIDHFFIWFMGKWALYSSPVKDKLLLDCPLPPGALPPPTLVLDLEGTLLGTIYTRKKGWRVAKRPGLDAFLKEMSQLYEIVVFTDSMGGLADEWITQMDPQGT-ISQRVYRDGTRYIDGKYVKDLSALNRPLEQTLIIDDNADCISMQPENAIKVKAFSLEDGSDPTADTALYDLAPFLRALATQGVADFRDVLRPHVGEDSNAVVADFRSKVNAVRQKEDAEKSKGLGGLVRQIAPVVGAGGPAAGMGGMLTSKDIVGDAPETLSPGMAAA 475
BLAST of mRNA_D-herbacea_F_contig106.622.1 vs. uniprot
Match: A0A835YRZ2_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ2_9STRA) HSP 1 Score: 234 bits (596), Expect = 1.160e-67 Identity = 128/307 (41.69%), Postives = 190/307 (61.89%), Query Frame = 1
Query: 601 IAILG---VAWQLKPDEVRRLLDDSPIDHLAVWAMGKY----QLYSSPVKDKLLPDFP---VPPGAPTPPVLVLDLEGTLLGTIYTRKNGWRVAKRPGLDEFLKEMAQLYEIVVFTDSFGGLAEEWITKMDP----------DNMYISHRLYRDGTRFVDGKYVKDLTSLNRPLEQLVIVDDNDDCISMQPENALKVPMFSLEEGSDPTADTVLYELAPFLRALAMQGVADYRNVLRPHIGEDYSAVVSDFRSKVNSVRHKEETERARGLGGLVR-----QIAPAVGSSGLSAGGMMTSKDIVGDAP 1446
+A++G +AW+L D++ L SP+ W + + ++ P DKLLPD+P +PP P PP LVLDLE TL+ + R+ GWRVA+RPG++EFL+EM+ YEIV+FT + G AE +T +DP + Y SHRLYRD T F +G +VKDL+ +NR ++ ++I+DD + +QP+N +++ + ++ G DP ADT L +L PFLRALAM+GV DYRNVLRP G+D AVV+++R +V++ + GLGGL+R + P + SA + +S+D+VG AP
Sbjct: 93 LAVIGGGALAWRLWHDDIAALYRRSPLHAAGRWVNAQLAEIARPFTEPSSDKLLPDWPPSELPPDTPCPPTLVLDLENTLVHMDWHRRTGWRVARRPGVEEFLREMSMYYEIVIFTSAHVGSAEPIVTSLDPAVSRARGVEVSSGYTSHRLYRDATLFSNGTHVKDLSKINRDMKHVIIIDDEPEAFQLQPDNGIRIKPYEIKPGEDPHADTALTDLIPFLRALAMEGVRDYRNVLRPFRGQDSDAVVAEYRRRVDAANAAQRERDNSGLGGLLRGAKRGHLVPDAQPTRRSA--IPSSRDLVGAAP 397
BLAST of mRNA_D-herbacea_F_contig106.622.1 vs. uniprot
Match: A0A7S2GPP0_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GPP0_9STRA) HSP 1 Score: 180 bits (456), Expect = 8.100e-48 Identity = 90/224 (40.18%), Postives = 148/224 (66.07%), Query Frame = 1
Query: 712 YSSPVKDKLLPDFP----VPPGAPTPPVLVLDLEGTLLGTIYTRKNGWRVAKRPGLDEFLKEMAQLYEIVVFTDSFGGLAEEWITKMDPDNMYISHRLYRDGTRFVDGKYVKDLTSLNRPLEQLVIVDDNDDCISMQPENALKVPMFSLEEGSDPTADTVLYELAPFLRALAMQGVADYRNVLRPHIGEDYSAVVSDFRSKVNSVRHKEETERARGLGGLVRQI 1371
++ P++ KLLPD+P +P P PP LVLDLEGTL+ + + R++GWR AKRPG+D+FL++MAQ YEIV+F+++ + E + +DP+N+ H+L R+ TR+ +G Y+KDL+ LNR L+++VI+DD++ S+QPEN + + F + DT L+++ FL AL +GV D+ +L + + +++ SK+ +++ +EE R RGLG LV+ +
Sbjct: 113 FTEPIRQKLLPDWPFFPNIPADTPCPPTLVLDLEGTLVKSTWDRRHGWRHAKRPGVDKFLQDMAQYYEIVLFSNNTASIVEPIMMSLDPENV-CWHKLTREATRYENGVYIKDLSHLNRSLKKMVIIDDDEQAFSLQPENGIHINAFKNARDKN---DTSLHDIGKFLAALVHEGVEDFPALLSTFKSRNAEDISNEYLSKLRTIKDREEENRNRGLGRLVKSL 332
BLAST of mRNA_D-herbacea_F_contig106.622.1 vs. uniprot
Match: F0WSY2_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WSY2_9STRA) HSP 1 Score: 177 bits (449), Expect = 2.290e-47 Identity = 110/279 (39.43%), Postives = 166/279 (59.50%), Query Frame = 1
Query: 571 SKALAGSATGIAILGVAWQLKPDE-----VRRLLDDSPIDHLAVWAMGKYQLYSSPVKD----KLLPDFP---VPPGAPTPPVLVLDLEGTLLGTIYTRKNGWRVAKRPGLDEFLKEMAQLYEIVVFTDSFGGLAEEWITKMDPDNMYISHRLYRDGTRFVDGKYVKDLTSLNRPLEQLVIVDDNDDCISMQPENALKVPMFSLEEGSDPTADTVLYELAPFLRALAMQGVADYRNVLRPHIGEDYSA--VVSDFRSKVNSVRHKEETERARGLGGLVR 1365
SK G G + W DE VR L+ +P+ L ++ GK + P+ D KLLPD+P VPP P PVLVLDLE TL+ + ++RK+GWR AKRPG+DEFL+ + Q YEIV+F++++ +AEE + K+DP + H L RD TR+++G VKDL+ LNR L+Q+V++DD+ +QPENA+ + F+ D D L +L PFL+ALA + V+D+R VL ED + + S + +++ + ++E + +G GG +R
Sbjct: 80 SKISLGLIIGSISGSIVWFYLLDENVKTKVRHQLNQTPLGELYRFSAGKVAEWIRPITDPSRSKLLPDWPIPQVPPNTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQFYEIVIFSENY--MAEEIVMKLDPKQCVL-HVLSRDATRYLNGSRVKDLSKLNRDLKQVVLLDDDPAAYQLQPENAVPIKPFANARDRD---DHELRDLIPFLKALASERVSDFRQVLAEFRDEDGALRDLPSKYGARLYQLEKEKEQAKQKGFGGFIR 352
BLAST of mRNA_D-herbacea_F_contig106.622.1 vs. uniprot
Match: A0A7S2WSD5_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSD5_9STRA) HSP 1 Score: 178 bits (451), Expect = 4.850e-47 Identity = 102/282 (36.17%), Postives = 164/282 (58.16%), Query Frame = 1
Query: 559 WGWGSKALAGSATGIAILGVAWQLKPDEVRRLLDDSPIDHLAV-WAMGKYQLYSSPV----KDKLLPDFP----VPPGAPTPPVLVLDLEGTLLGTIYTRKNGWRVAKRPGLDEFLKEMAQLYEIVVFTDSFGGLAEEWITKMDPDNMYISHRLYRDGTRFVDGKYVKDLTSLNRPLEQLVIVDDNDDCISMQPENALKVPMFSLEEGSDPTADTVLYELAPFLRALAMQGVADYRNVLRPHIGEDYSAVVSDFRSKVNSVRHKEETERARGLGGLVRQIAP 1377
WGW AL G G+ ++ A P + + ++ A W + + + S+P+ KLLPD+P +PP P PP LV+D+EGTL + + K GWR AKRPG D F+KEMA+ YE+V F+++ G+ + + +D D H+L+R+ T F G YVKDL+ LNR +++++++DD+ QPENA+++ ++ D DTVL +L PFL A+ +GV D+ VLR +D + + + + ++SV+ ++E RGLGGL+R ++P
Sbjct: 66 WGW--LALGGVTGGVGLISFA--ASPYGRETAVGKAIVESYAWRWLVLQLETMSAPLFKPAYTKLLPDWPYFPNIPPDVPCPPTLVIDVEGTLCTSTWDPKYGWRHAKRPGADRFIKEMARYYELVFFSNNIAGVGDPIMASLDKD-FVTPHKLFRESTTFHQGAYVKDLSHLNRDMKKVLLIDDDPLAFQFQPENAIQIKPYTDAYDRD---DTVLEDLIPFLAAMVNEGVTDFPAVLRNFRSKDAGEIANSYSNLLSSVKQRQEEATTRGLGGLLRNLSP 339
BLAST of mRNA_D-herbacea_F_contig106.622.1 vs. uniprot
Match: A0A5D6YBW0_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YBW0_9STRA) HSP 1 Score: 176 bits (446), Expect = 5.910e-47 Identity = 117/294 (39.80%), Postives = 169/294 (57.48%), Query Frame = 1
Query: 580 LAGSATGIAILGVAWQLKPDEVRR-----LLDDSPIDHLAVWAMGK----YQLYSSPVKDKLLPDFPVP---PGAPTPPVLVLDLEGTLLGTIYTRKNGWRVAKRPGLDEFLKEMAQLYEIVVFTDSFGGLAEEWITKMDPDNMYISHRLYRDGTRFVDGKYVKDLTSLNRPLEQLVIVDDNDDCISMQPENALKVPMFSLEEGSDPTADTVLYELAPFLRALAMQGVADYRNVLRPHIGEDYSAVVSD----FRSKVNSVRHKEETERARGLGGLVRQIAPAVGSSGLSAGGM 1413
LAGS +G + W D+ + L + + + A K ++ ++ P ++KLLPD+PVP P P PVLVLDLE TL+ + ++RK+GWR AKRPG+DEFL+ + Q YEIV+F+ + LAEE + K+DP + H L RD TR+ G +VKDL +LNR L Q+VIVDD+ +QPENA+ + F+ D D L +L PFL+ALA++ V D+R VL ED VV D + ++V ++ ++E ER +GLGG +R G + GM
Sbjct: 84 LAGSVSGSVL----WHFLLDDATKKSVADTLGGTVLGDVYALAAAKVEDLFRPFTDPSREKLLPDWPVPDVPPDMPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQYYEIVIFSQN--PLAEEVVMKLDPKRCAM-HILSRDATRYYKGVHVKDLANLNRDLRQVVIVDDDPAAYQLQPENAIPIQPFTNGRDRD---DRELADLIPFLKALALERVPDFRVVLDEFRDED--GVVRDLPSRYSARVRAIEMQKEQERQKGLGGFIRGRLSQRSPPGFAGAGM 365
BLAST of mRNA_D-herbacea_F_contig106.622.1 vs. uniprot
Match: A0A3R7KV46_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KV46_9STRA) HSP 1 Score: 176 bits (446), Expect = 8.910e-47 Identity = 108/244 (44.26%), Postives = 156/244 (63.93%), Query Frame = 1
Query: 712 YSSPVKDKLLPDFP---VPPGAPTPPVLVLDLEGTLLGTIYTRKNGWRVAKRPGLDEFLKEMAQLYEIVVFTDSFGGLAEEWITKMDPDNMYISHRLYRDGTRFVDGKYVKDLTSLNRPLEQLVIVDDNDDCISMQPENALKVPMFSLEEGSDPTADTVLYELAPFLRALAMQGVADYRNVLRPHIGEDYSAVVSDFRSK----VNSVRHKEETERARGLGGLVR---QIAPAVGSSGLSAGGM 1413
++ P + KLLPD+P VP P PVLVLDLE TL+ + ++RK+GWR AKRPG+DEFL+ + Q YEIV+F+ ++G AEE + K+DP + H L RD TR+++G +VKDL+SLNR L+Q+VI+DD+ +QPENA+ V F+ D D L +L PFL+ALA + V D+RNV+ ED VV D SK V+ + +++ ++ +G GG VR P+ G++AGG+
Sbjct: 141 FTDPSRLKLLPDWPIPQVPADTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQYYEIVIFSQNYG--AEEIVQKLDPKQCAL-HILSRDATRYLNGAHVKDLSSLNRDLQQVVILDDDPAAYQLQPENAIPVKPFTNGRDRD---DHELKDLIPFLKALASERVPDFRNVIGEFRDED--GVVRDLASKYGARVHQLEMQKQQQKKKGFGGFVRGRLSHHPSSSQGGVAAGGI 376
BLAST of mRNA_D-herbacea_F_contig106.622.1 vs. uniprot
Match: A0A7S1G064_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G064_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.660e-46 Identity = 102/259 (39.38%), Postives = 157/259 (60.62%), Query Frame = 1
Query: 712 YSSPVKDKLLPDFP---VPPGAPTPPVLVLDLEGTLLGTIYTRKNGWRVAKRPGLDEFLKEMAQLYEIVVFTDSFGGLAEEWITKMDPDNMYISHRLYRDGTRFVDGKYVKDLTSLNRPLEQLVIVDDNDDCISMQPENALKVPMFSLEEGSDPT--ADTVLYELAPFLRALAMQGVADYRNVLRPHIGEDYSAVVSDFRSKVNSVRHKEETERARGLGGLVR---------QIAPAVGSSGLSAGGMMTSKDIVGDAP 1446
++ P DKLLPD+P VPP P P LVLDLE TL+ + + RK+GWR AKRPG+D+FL++MAQ YEIV++T + G+AE I +D I H LYR+ TRF+DG +VKDL+SLNR +++++ +D+++ + + P+N ++V ++ DP D L ++ P L + +G D +LR + G D +V ++S+V+ +R + + GLG L + ++ PA S S +TSKD+VGDAP
Sbjct: 152 FTKPHADKLLPDWPMPNVPPDLPCPHTLVLDLENTLVSSTWDRKHGWRHAKRPGVDQFLRKMAQYYEIVLYTSTIQGVAEPVIQNLDKQQA-IMHALYRESTRFIDGVHVKDLSSLNRNVKKIIAIDNDEKALQLHPDNLIRVKPYT-----DPRNRTDDTLEKIMPILIEIVNKGYDDIPAILRQYRGMDADEIVEHYQSRVDEIRKNRDQIYSSGLGWLNQRRNNPMPEPELPPASSSMRPSGTPAITSKDLVGDAP 404
BLAST of mRNA_D-herbacea_F_contig106.622.1 vs. uniprot
Match: A0A8K1FDJ8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDJ8_PYTOL) HSP 1 Score: 174 bits (442), Expect = 2.780e-46 Identity = 102/225 (45.33%), Postives = 147/225 (65.33%), Query Frame = 1
Query: 712 YSSPVKDKLLPDFP---VPPGAPTPPVLVLDLEGTLLGTIYTRKNGWRVAKRPGLDEFLKEMAQLYEIVVFTDSFGGLAEEWITKMDPDNMYISHRLYRDGTRFVDGKYVKDLTSLNRPLEQLVIVDDNDDCISMQPENALKVPMFSLEEGSDPTADTVLYELAPFLRALAMQGVADYRNVLRPHIGEDYSAVVSDFRSK----VNSVRHKEETERARGLGGLVR 1365
Y+ P K+KLLPD+P VPP P PVLVLDLE TL+ + ++RK+GWR AKRPG+DEFL+ +AQ YEIVVF+ + +AEE + K+D + H L R+ TR+ + +VKDL+ LNR L Q+VI+DD+ +QP+NA +P+ + +G D D L +L PFL+ALA + V D+R+VL ED V+ D +K V ++ ++E E+ +GLGG +R
Sbjct: 143 YTEPSKEKLLPDWPIPQVPPDTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLEALAQYYEIVVFSQNHMYMAEEILVKLDR-KQNVLHLLARESTRYFNSAHVKDLSKLNRDLRQVVIIDDDPSAYQLQPDNA--IPIKAYTDGRD-RGDHELKDLIPFLKALASERVGDFRSVLAEFRDED--GVIRDLPTKYGARVRALEMQKEQEKQKGLGGFIR 361
BLAST of mRNA_D-herbacea_F_contig106.622.1 vs. uniprot
Match: A0A662Y4U5_9STRA (Mitochondrial import inner membrane translocase subunit TIM50 (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y4U5_9STRA) HSP 1 Score: 174 bits (441), Expect = 5.530e-46 Identity = 100/223 (44.84%), Postives = 149/223 (66.82%), Query Frame = 1
Query: 712 YSSPVKDKLLPDFP---VPPGAPTPPVLVLDLEGTLLGTIYTRKNGWRVAKRPGLDEFLKEMAQLYEIVVFTDSFGGLAEEWITKMDPDNMYISHRLYRDGTRFVDGKYVKDLTSLNRPLEQLVIVDDNDDCISMQPENALKVPMFSLEEGSDPTADTVLYELAPFLRALAMQGVADYRNVLRPHIGED--YSAVVSDFRSKVNSVRHKEETERARGLGGLVR 1365
++ P + KLLPD+P VP P PVLVLDLE TL+ + ++RK+GWR AKRPG+DEFL+ + Q YEIV+F+ ++G AEE +TK+DP + H L RD TR+++G +VKDL +LNR L Q+VI+DD+ +QPENA+ + F+ +G D D L +L PFL+ALA + V D+R+V+ +D V S + ++V+++ ++E E+ +G GG VR
Sbjct: 152 FTDPSRQKLLPDWPIPQVPADTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQYYEIVIFSQNYG--AEEIVTKLDPKQCAL-HCLSRDSTRYLNGAHVKDLANLNRDLRQVVILDDDPAAYQLQPENAIPIKPFT--DGRD-REDHELKDLIPFLKALASERVPDFRSVIGEFRDDDGVIRDVASKYGARVHAMEMQKEQEKRKGFGGFVR 368
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 484.2 |
| Seed ortholog evalue | 7.3e-134 |
| Seed eggNOG ortholog | 2880.D8LBI3 |
| Preferred name | TIMM50 |
| KEGG ko | ko:K17496 |
| KEGG TC | 3.A.8.1 |
| Hectar predicted targeting category | mitochondrion |
| GOs | GO:0001836,GO:0003674,GO:0003824,GO:0004721,GO:0004722,GO:0004725,GO:0005048,GO:0005102,GO:0005126,GO:0005134,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005744,GO:0005886,GO:0006464,GO:0006470,GO:0006605,GO:0006626,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006839,GO:0006886,GO:0006915,GO:0006996,GO:0007005,GO:0007006,GO:0007154,GO:0007165,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008637,GO:0009987,GO:0012501,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016311,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016791,GO:0017038,GO:0019538,GO:0019866,GO:0023052,GO:0030150,GO:0030943,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0035335,GO:0036211,GO:0042277,GO:0042578,GO:0042886,GO:0043021,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044451,GO:0044455,GO:0044464,GO:0044743,GO:0044877,GO:0045184,GO:0046902,GO:0046907,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0055085,GO:0061024,GO:0065002,GO:0065007,GO:0065008,GO:0070013,GO:0070585,GO:0070727,GO:0070851,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072655,GO:0090559,GO:0097190,GO:0098796,GO:0098798,GO:0098800,GO:0140096,GO:1901564,GO:1990542 |
| EggNOG free text desc. | phosphoprotein phosphatase activity |
| EggNOG OGs | COG5190@1,KOG2832@2759 |
| Ec32 ortholog description | Tim50 homolog, mitochondrial inner membrane protein of TIM23 complex |
| Ec32 ortholog | Ec-27_003880.1 |
| COG Functional cat. | K |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko02000,ko03029 |
| Exons | 7 |
| Model size | 1484 |
| Cds size | 1482 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927471.9526005-CDS-D-herbacea_F_contig106:411004..411265 | 1622927471.9526005-CDS-D-herbacea_F_contig106:411004..411265 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig106 411005..411265 - |
| 1690790189.1351168-CDS-D-herbacea_F_contig106:411004..411265 | 1690790189.1351168-CDS-D-herbacea_F_contig106:411004..411265 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig106 411005..411265 - |
| 1622927471.9687748-CDS-D-herbacea_F_contig106:412264..412375 | 1622927471.9687748-CDS-D-herbacea_F_contig106:412264..412375 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig106 412265..412375 - |
| 1690790189.1449914-CDS-D-herbacea_F_contig106:412264..412375 | 1690790189.1449914-CDS-D-herbacea_F_contig106:412264..412375 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig106 412265..412375 - |
| 1622927471.9823916-CDS-D-herbacea_F_contig106:414152..414317 | 1622927471.9823916-CDS-D-herbacea_F_contig106:414152..414317 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig106 414153..414317 - |
| 1690790189.1525264-CDS-D-herbacea_F_contig106:414152..414317 | 1690790189.1525264-CDS-D-herbacea_F_contig106:414152..414317 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig106 414153..414317 - |
| 1622927471.994153-CDS-D-herbacea_F_contig106:422822..422928 | 1622927471.994153-CDS-D-herbacea_F_contig106:422822..422928 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig106 422823..422928 - |
| 1690790189.1608608-CDS-D-herbacea_F_contig106:422822..422928 | 1690790189.1608608-CDS-D-herbacea_F_contig106:422822..422928 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig106 422823..422928 - |
| 1622927472.0110264-CDS-D-herbacea_F_contig106:423621..423749 | 1622927472.0110264-CDS-D-herbacea_F_contig106:423621..423749 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig106 423622..423749 - |
| 1690790189.173965-CDS-D-herbacea_F_contig106:423621..423749 | 1690790189.173965-CDS-D-herbacea_F_contig106:423621..423749 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig106 423622..423749 - |
| 1622927472.024988-CDS-D-herbacea_F_contig106:425446..426086 | 1622927472.024988-CDS-D-herbacea_F_contig106:425446..426086 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig106 425447..426086 - |
| 1690790189.183626-CDS-D-herbacea_F_contig106:425446..426086 | 1690790189.183626-CDS-D-herbacea_F_contig106:425446..426086 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig106 425447..426086 - |
| 1622927472.0392354-CDS-D-herbacea_F_contig106:427222..427293 | 1622927472.0392354-CDS-D-herbacea_F_contig106:427222..427293 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig106 427223..427293 - |
| 1690790189.1913903-CDS-D-herbacea_F_contig106:427222..427293 | 1690790189.1913903-CDS-D-herbacea_F_contig106:427222..427293 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig106 427223..427293 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig106.622.1 >prot_D-herbacea_F_contig106.622.1 ID=prot_D-herbacea_F_contig106.622.1|Name=mRNA_D-herbacea_F_contig106.622.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=494bp
QLATRTASTKRTMLLGRVAAIASGSTSAGTPSACRTAAQRRFLAKGVTKG
KKPGGQQPAGARGGGGGAKAGSTKKAATEQSNASAKAKDVATPAASAAAT
TTAGGVTPNTAAATASTTSRGGFTKSEMLAARQARKASAAKSSAAAAATA
ATKAAEAARLGKGAGAGVGVGAGVAAGGAKSGERGKWGWGSKALAGSATG
IAILGVAWQLKPDEVRRLLDDSPIDHLAVWAMGKYQLYSSPVKDKLLPDF
PVPPGAPTPPVLVLDLEGTLLGTIYTRKNGWRVAKRPGLDEFLKEMAQLY
EIVVFTDSFGGLAEEWITKMDPDNMYISHRLYRDGTRFVDGKYVKDLTSL
NRPLEQLVIVDDNDDCISMQPENALKVPMFSLEEGSDPTADTVLYELAPF
LRALAMQGVADYRNVLRPHIGEDYSAVVSDFRSKVNSVRHKEETERARGL
GGLVRQIAPAVGSSGLSAGGMMTSKDIVGDAPDKLSPAMAAAVA back to topmRNA from alignment at D-herbacea_F_contig106:411003..427293- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-herbacea_F_contig106.622.1 ID=mRNA_D-herbacea_F_contig106.622.1|Name=mRNA_D-herbacea_F_contig106.622.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=16291bp|location=Sequence derived from alignment at D-herbacea_F_contig106:411003..427293- (Desmarestia herbacea DmunF female)
CAGTTGGCTACTCGTACAGCTTCCACGAAACGTACCATGCTTCTCGGACG
CGTGGCCGCAATTGCATCTGGGTAAGCGAGCATTTACTAATGTTTGCAGT
GAGTCGACATATAAGTGACAACTACCTTACGGCCCCATCTTTTTGAGTTC
ATTCTTGGACACGGGTGAAAGTTGTTGTCTGCTGGTATTTATTTATGATA
TAATAGTATTTACGACGAGTACGAGTGAGTATGTTCTATTGTAGCACGGC
TGCATATCTGTGTTGCACGCTGTCCGTTGCCCTTGTCGGGTGCACAGCAG
GCGGTGCACTCTTTGTCTCGAAGTTTGGGCTCATGCTTATTTTGACGAAT
AGACTAATCGCTTGTGCTTCATGTCATCATGTCAAGAATGTAGCATTGCG
CCTCTCCAATAACAACTCTGCACTCTTGTGCACCCTCCTGCTGCTGCCAT
CCTCAAACTCACGGCGAACGATGGTCCACTACGTACCGTCCGTTGTACTA
CTGCTGTCTGTTGTACTACTACTGTACAGCCGTATTCACCGACGGCACAG
CGGCGCAAAAGGGGTATAATAGTGCACCGGACAGCAGTAGATGTTTAGTA
CATACGGCTACAACAGTGACTCTCGAAGCTCGCAAAACTTACCTACGAGT
ACTCGTACCCTTGGGGTGTGCTCGTGCTGCCGATCTGCCGATTTGCTCGT
GCTGCCGATCTACCGTGCAGACTAGATGGGTTTGTTCGGACCGTTGGACC
GCCTACCGGTATTAATAGCTCTTACGAATACGACAGCGGCGAGGTGGAGT
TGGAGGGTCATTGCGAGTGCAAGTATAGCTATGATACGAGTTCGTACGTT
TTTACTATCATACTTCGTAGTTCACACTTTACGATATTGCATCTCCGTAC
AACCTGAGTTGCATACCGGAGCTCCTCGAAAGCATCAGTCAAACGAGCCC
CGTCCTCTCGCTTCCCACAACTCTTTATATGATAGCTCGCAACCCAACCC
CCAATCGGCCGATCGGGTCTTGTACTCGTACAATTGTGTTGCTCCGTATT
TTGTATTTTACAGCTTATACGCAATATAGCTTCATGCTGTGTTGTTGGTG
TTGACTTTTGTGATGATGCAAGTGTTGCGAATACGAAGCCTCTCCCGCCC
ACCACCACTCCACCCACCCACCCGCTGCTTTGCGCCGACGACCCCATGAA
TGCCCAGAAGCACTAGCGCTGGAACCCCCTCCGCGTGCAGGACGGCAGCT
CAACGCCGCTTCCTCGCCAAGGGAGTTACGAAAGGGAAGAAACCAGGGGG
ACAACAGCCGGCAGGGGCACGAGGTGGAGGAGGAGGAGCAAAAGCTGGCT
CGACGAAGAAGGCCGCTACCGAGCAGAGCAATGCTTCAGCCAAAGCAAAA
GACGTAGCAACGCCAGCCGCCTCGGCGGCGGCAACAACAACGGCAGGCGG
CGTAACACCCAACACTGCTGCAGCTACTGCTAGTACTACTTCTCGCGGCG
GTTTCACCAAGAGCGAAATGCTGGCCGCAAGACAGGCGAGAAAGGCGAGC
GCGGCAAAGTCTAGCGCTGCCGCGGCCGCAACGGCTGCGACGAAGGCGGC
GGAAGCCGCGCGGCTGGGGAAGGGGGCAGGGGCGGGGGTGGGAGTGGGGG
CGGGCGTCGCGGCGGGGGGAGCTAAGAGCGGAGAGAGAGGGAAGTGGGGG
TGGGGGTCTAAAGCGCTGGCGGGATCGGCGACGGGGATAGCTATACTAGG
CGTCGCCTGGCAGCTGAAGCCGGATGAAGTGAGGAGGCTGTTGGACGACA
GCCCGATTGACCACTTGGCCGTGTGGGCGATGGGAAAGTACCAGCTGGTG
CGTTTATGTGTTTGTGTATTGTTTTAAGGGGGGAAAGCATCAGTTTCGTG
CTGCTAGGTATTACGTTCGAAAGGTTTTTCTGGCTATGCTTTTTTTTGTT
GGTTCGTTGTTTTGTTGATGTTTGTTTCACCTGGTGGATATAGATGTTCG
CGTTTTTTTTTTTTTTAGGTATTGTGGAGGTCTGGTTGTTGCAGGGACGG
GGGGGGGGGGGCGCTGTTACAATGCTTTCTCAAGCCCCCCACCACCGGCT
TTACCTCCCTGGGTGGCTATCTCCAGTACTTGATACTCCAATGGGAACAG
AAGGGCCTCCGACGTACCCGCGCCGTAAAGGCAGTCAACCATCGTGTTCT
ACAATAGTTGATGAGGGTTAAATCGGCAATCAGACGCAGCTGTCATAGTT
GTAGAAGCTTGGGAGTGTGCAGTAGCATACAAAGCTAGCTCTCTCTCTTT
GTGCACCAAAAGTTCGCCTGTGTTTTATTATGTTTTTGCTCTTCGTCATT
TGCTGGGTGTTTCTGTTGCTGTTGCTGTTGGGAGCTGATATTTCGTTGCT
GTGTGCGTTGTTCTTGCTTGGTTTTGGTTGGCGTGCTGGACTGTGCGCGA
CGTTGCCCGTCAGCTGCCGCCGACCTCTTGCTCCACTGTGATCATCATCA
TAGCGGCAAGCTTGGCTTTAGATGCACGATGGGTTCAGGCCGCGGTAAAC
GAATTTACGGCAACGTTCCACCCGAAACAAACTTCGCGAACATGATGTAT
CTCCTATCATGACGGAGGCGTTCCCCTCCGTTATCCCCCCCCCCCGCCCT
CCCTAGACAAACCTCTCTTGGGGTTGGCTATTTTGGCATGGAGCGATGAC
CTTCTCTGTGGGGAACGCCGAGGTATCGACGTGTGTATATATATTCAGGG
AACTCTGAGACCTCGATCAACGAGCTAAGACTATCCCCAACCATTGATAT
AACTACTGGCCGTAGGTGGGCCACGTGATACGATCGATGTTTTGACGTCT
CTTCATAAATTGGATGGATTGTTGGAACGCCCTACGAGTCGAGCATCAAC
ACTAAACTTGCGATCGCACTCCGTCAGGATATACAGGCGTAGATTATCCC
CCCGAATACGTATCACACACTTGTTAACCATTGTGTTAATCAATCAATGC
GTGTGATGCGTGACGCGGCGTTTATTGGCACGTGCGCGCGCGGAGATGGA
ATTACCTGTAGCGAGAGCGGCGCTTGGAGCACCATCACCGCCCGCTGAAA
CCCGCCCGCTCAATGTGCTTAGTGCTTAACCTGGGATGACAAATTAATCA
ATCCATGGCAACAAGTCGGTTTTGGCTTATAATTTTTCTTCCAAAGACAT
CGGCTTATGTACTAGTAGCTGGTATTTATCATGCAACCATTGTGAAAAGT
GGCCTGGCAGTCGAAAACCCGGCATATCGCCCCGTCCCGTCATTGTATTG
TTGTTAAGAGATACGGCGTCTGTGGTGGTCAGTGATTATGACCTGTGCTA
TCATCCCCCCCCCTCGCGTCACCTCCCCCCACGCTCTCCCGGGTGCCGGC
ATGCGTTCCCTTTGAACTCCACTCGTATCATAGTTTCCGTTCTGGCATAT
ATTATACCTGATCCAATGTGCCCACGCAATGTTTCCTTCTTGTTTCTGGG
GGGGGGGGGGCGAAATCATTCACGACGAACTTTTTCACGCGCAGTATTCG
AGCCCGGTCAAGGATAAGCTCCTACCCGACTTTCCTGTTCCACCGGGAGC
GCCAACTCCGCCCGTGCTTGTGCTCGACCTGGAGGGCACGCTGTTGGGCA
CGATATACACCCGCAAGAACGGGTGAGTGAGATGGATTATGTAGAGAGAA
ACAACGGAGTTATTATTGGTCTTGGACAGACGTCGACGCGGCTTTTGAGT
GCGTCCCACGCCGGAGGTCGCAGTGTGTTGTGCTTATAATATGCCAGTGC
GAATGCCCTTGAACACGTGGTGTGGCCTCGCGAGGTGCGGGAAACCCTTT
TTATGTTCGAGCGTCGGTGTCGGCTCATCCACTGCTGCGGCTCGAACGCC
GAACATGAGCGGTCGCAAGGCGTCAATACCGCCGTCTTGACCCTTGTTTC
TGGTCTCACGGGTAGTTTTTCAAACAATCCGATCCCGATACCCCCCCCCC
CCCCTCTAACAACGAGAAAACGGTCGCTATCGTAGGAGATAGATAGTGGC
CACAAAAGGCGAAAAAGGAAGGGTTTTATGTAAGATATGGCAAAAACGTA
AAGAGGTGTCTCTATTAGGAGTAGTAACGGTGCTCCGTCTCGAAAGGGAC
GCGTGGTCAATAGTCAAAGGAATAAGGCAAGCAGCAAATGACTACGCCCC
CCCCCCCGCCCCTCCTGCACGCCAATCCATGCGTGACCACCAATGCAGCA
GTCCAATGCCCAGAAGCAAGTACGCCCCCCACTGCTCCTGCCCTTCCTCG
TCGTTTTTGTTTTTGTTTTGTTCGGTGTACGGCATATATATATGCCTGGC
GGCCGTCTATTTCAGGTGGAGGGTTGCCAAGCGACCAGGGTTGGACGAGT
TTCTGAAAGAGATGGCCCAGCTGTACGAGATAGTGGTGTTCACTGACAGC
TTCGGAGGGTTGGCTGAAGAGGTATGTCATATGTTTGGAGGCGCTTGTCA
AGTGAGGTCGTTTTTTGTCTCGGGTTGAGGCTGGTCGAGGATGGAACAAT
GGTTGAACACTCGGCGCTGGGCGATCCGGAATCATCGTGTTTATCTTTAG
GGCAGTGGCCAAAAACAGGTACACCTGTCCCCTTTACGCCAAAAACAGGT
ACACCTGTCCCCTTTACGGCCAAAACCAGGTACATGGGAGGCGCACGAAT
GCTGTACCTGTTTTTGACCGGAAAGTGGGCATGTGTACCTGTTTTTGGCT
GCAAAGTGACACGCATACCTGTTTTTGGCCGGAAAGTGACGCATTTTATC
TGGCGAGAAACTGGACTTGTGTACCTGTTTTCGGTTGCAAATTGACTACG
TGTACCTGTTTTTGGCTGGAAAGTGACACAATTTGTCTGGCTGAAAGCTG
GACTTCTTCGTCAGTTGTATTCATGAAAATAGCTAATTGAAATCAGATAG
ATGATAGGCGTCAAAGACAAGATACCAAAGACCCTGCGATATTACTTGTA
GTGATTATCATCCCTACACGTTTACAGCGGACACAACACAGTGATCGTAA
CTCCCCAACCACCCTGTGAGCTCCCCAGCAACCTCTACCTCGATGTGCGC
CTCTCAGGCTGGGGAATGCAGTGCTTGTGAAGTGTTGTAAATAAGCAAAA
TAATTGAATCCTCCTTGTTGCCTTTGATGCTACCCCACTACTATGATGGT
GGCGGGTGACAACGCCCCGGCTGTTGTTTTTCTGTTTTTTCAAAAAGTAT
GTGGTCGACCGTAAAACACGGGAGTCTACGCCCATGCTACCTGCCACGAA
CATTCGGGGCGAGCCAGTACTTTCTTGCGTACTTCCCTGCTGCCATCAAT
AATATTAAATATCTTCCCCTAAAACACTCAGCATCTCTCTCCTTGCAGGT
ACTACATGCTTATCACCCCAACAAAGCCCCGCCGACGATGATATAGTATG
ATCACCACTCACTGCGAACCCAAAGATAAACTATCATCATCGTATCATAC
TATCAGAACTTCGCTTGACATAATATTGTGCCTGGACGACGTATTATGAT
ACGTTCACTACCACCGGCACTTCGCTTGGCGTATTGTGCTTCGACGAAGT
GTTACATTCGCCGTTGGACTTCAACCTCTTCCGGACACGGGGACCCTTCT
TCGGGCGGCAAGCCTGTCCGTCTACTGGAGTTGCCGCCATGGTGCTTGTG
TCGTGTTGTAGAGCGTGTCGATGGACTATATGGATGGTGGAGGAGTTTGA
GACAGACGTGTGTACGTGTGTACGTAGAAGGGTGCGGTATAGGTGACCCG
GCCGGTGTGTTTTTGGTCGTGCGTTTCGCGCGTCTCCTGTGATTCGTCGC
GCGTCGGCGCGCGTTCTGGTGTCCTACTCGTATATATAAAAATTGGAACA
TCTGATTGGCTGAAAGTTGACGAAATTGGCCAAAAACAGATAATGGTATG
GCCAAAAACAGTTGGAGCCAAGCAGAGTAGACAGTGACAGTTGTACCTGG
TTATTTTGTGGCCAAAAACAGGTACGATTTGATGTTGGCCAATCAGCGGG
CTCCTCGCGTGTGTTTTTGCCTTGTTTCTCGACCGTACCTGTTTTTGGCC
AGAAAGTGGCCAGGTGTACCTGTTTTTGGCTAATGCCCTTATCTTTATGT
TAGAGGCGCTCGTTAGGTGTGTCAACGCGGTTGTTTTTGTTGTGAGGTAC
CGGCGGTGTTTGCTCTCTCTCAAGTGCATGGTGTTAGCATGATGTCATGG
TGTTGACATGATTATGCTGTACACACGACGAAGCTTGGCGCCGCCGTTTT
CGAAACAGCGCGGGTCCCGCTGGTTCTCCCAGCCGTGCGGCGGCGTGCAG
CAGCGTCGTTGTTTTCTCAACTTGCCCTCTGTATGATGTGATGGTGGGTG
TTGTTTACAGTATAATACGTTACAAGGTCGAGCATGAGGCGTAGAACCTC
GTGGCAAGTGGCATTAAGCTGGGTGCGGTTTGAAATAATGCATTTAGATT
TAAAAAAAAAAAAGAAGGGAACACTAACAAAATTAACAAGTAAATCCTGT
AACACGATTACGAAGACGATTAGGTAGAATCTACATATACGTTAGCGTTT
TTGTAGGTCGGACCTTTGAAAAGGTTTTGACTCTCTAGTGTGCTCTGTCT
GTGTTTTGTTTTCATTTTATTTTAGTTTTGTGTTGTGTCTACCTTTTGTC
TTAGCCACTATCTCCTAAGTCGCGGATGATATGAAATCAGTGGGGGTACC
TTGAGCTTGTGGAGAGGGCCCGGAGGGGTCGGTTTTTCATCGGTAAAAAA
AAGGTGTCTTGACTCTGTGACCACGGGTCCGCGCGATCGGGCTAATGTGA
CGGAAATAATAATAATAATAATACGAGCTGGTTCCAGTAAGAGACATCAC
ATTCCTTCTTCACGTTTTTGCGCCCCCTAAGAGTGAAAGTTGGAAACTGA
AATTTTGAATTTTGCATGATTGTTGTTGATGAGAATACAATAAAAACGCG
TGTTTGGCCTTTCTAAAAAAAAAAAAATCAAGTCTGGGGAGGCGTTTTTG
TCATTTTTTTTCATTTTTCGGTCGATTTGACCTGGAATTTCTCGCGAAAC
ATATATTATTTTTTTAAAAAGGCCAAACGCTCATTTTTTTTATTCTCATC
ACCGACAATCATGCAAAATTTCAGTTTCTAACTCTCAAAGTTAGGGGGTG
CTAAAAATGGTTTTTGTGCCTAGCAAACTTCTAACGTGTTCACCATCTAA
ATATATAGGTTCTACAATGGGAATCTGTGAACCTTGATAACTCTGGACAA
AAAAGAAAATTTGAACATGAAAATCTGTGACGTGTATTGTATTGCTATGA
AGAACATTTGTGCCAAACTTCACTTTCAGAACTTCAACCCATTGTACGGA
TGTGATTTAGTTTTTGCTACAAAACCCTGATATTTGAGCTGGAAATTACA
TACTACGGAGTAAAACTTTTCGGTTTCAAAAATGCCCCCGGAACAATCGA
CCCCCCCCCCCCCCTCCACAATTCACAATGCAGGGATCGCGCGCCAAATT
AGCTTTCATCGATGTGTTCCCCTGGGTCATGGGATTAATTCAACATGTTT
AGCGTCAAGGTATTCGAAGTATTCACCGAGAAAGGTCCCGAAGGTGGAAT
GGTATGCTTCTTACCGGAACCAGCTCGTAATTATTATTATTATTATTATT
ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTAT
TATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTA
TTATTATTATTATTTTCGACAGTAGTGAGTTCGTTAGGGTTAGGGGTTAT
GGTTAGCGGTAACTGTTTTTGGACTGCTGAAGTGCCCACGGCATTTCTAA
TGGTATAATTAAACGACATCTTTAAGATCCGACCTACCAAAATGCTATCT
ATCATAAGGCGGCTCGTTGTTTCGAATTCGTTTTGACAGAACTAGTAATA
GAGCGCTCTCAATATATATAGAGCTGTATATATTTAGTTAGCTATGAACA
TATTACAATTTACCAAATACGTCAGAGCACAGGAAGTGGGCCACGCATTT
CAGCATTGCTTAGCCCAGCGTTCAGCATAGCAGGTTTCAGTTTTCACATT
AATTTCAATACGAAACATATAGCAGGTAGACATGTCTGCTTGAATGACAG
AAAATTTCTTCTTCAGATTGGAGCAAGCGGACTTTTCTCGCCTTCTGTCA
GCTAAAGCGGGCGGGGCCTCTTTTCCACATTAATTTCAATATCAATTTAC
AAAAAAAACATCATAGCACAGGAAGTGGACCACGCATTTCAGCCTTACTC
AGCTCAGCGTTCAGCATTGCAGCATTGCAGATTTCACGTTAATTTCAATT
TTAGTAACTTATCTTATGGATTACGTTAGACCCAGGAAGGCAGCATTGAC
AGTTTCGCCACGGCTCACAGAGCAGCATGGATAGATTCATCACCGGCCAG
TTCATCATTGCTATACCTTATCTGTGACGTCTGGATGCACTACTGTACAA
GCGACAGCCGCTGCACGGCTACTCGCCCCCTGTTTATTCAAGTCCAGCAA
GTAGGCCAGGTACTTGATTATCACCCTTGATTATCACCATGGTTGGCGGA
AGTTAGGGGTTCGATTCCCGGAGAAAACAATATGGCACTTTTCTGTGCCA
TATCTTCCGTCGCGAGCGCGAGAGCGCGATAGCAAGCACAATTCGATGAA
AGTCGAAGAGGGAAAGTGCTGCAACCTTCTCGCGATTAAACAGGACCGAC
AAAAACGTAACCACTTGTTATAGACCACAGCTGTTGTTGTTGTTGTTGTT
GTTGTTGTTGTTGTTGTTGTTGTTGTCTTCACATTAAAAATCGTCCATTC
TACCGTACGACATCCAGTAGCGTACTCAGAGTCTATACTAGATCTTCTAT
CCTAGAAAAACACGAAATTCCGTGGTCACAGGCTAACATACCAAACAAAT
CGCGAGAACATGTAAAAAAGAAGAAAAAAAAAAATAAAACAAAATAAGAA
AAAGAGAGAGACGAACTATTAATAGAAAGAAAAAAGATGGGAAGAAACAA
TTAAAGATAAAATCTATCAAATAAAAAGCTTTTCATAATTACTTGGCCTC
TCAACCGTGCTCTTTTTTACACCTTTATTTTTGATATTAATTTTTATTAC
AAATGCATCATCAGAAATGACGTTGTCAAACGACGTATGATAGAAATGCA
CGTGGACATCTTCCTCTACAACCCCGCCATCGTCTTCGGCGTGAATGTCC
TCCAAAAATCATCCACAGACAGACGCAGAGACATATATATATATACACCT
ATATATGATTGTTCCAAATGGCTGACAGGGCACCAAATCAAAATTCTGTA
CTTAAATCGAGTGTTTTATATCGCGTCTGGACACAAGCGGCATCGTGGTG
GCATCGCGATGCCCGCCGAGAAGAGCCGCGGAGATTCGGGTGTTTTCTCT
TCTTTCTTCCCCAAGATACGCAAAATCATACGAAGGGTCTACCACAAGAG
CCAGAAATCGTGTATTATTTTGCAGGCTCTACAACAAACAGACAACAGAC
AGTAGTAGTAGTAGTAGTAGTAGTATCATGAGTACGCTCCTAGCTGGGGT
GGGCGCATAAGAAGGGAGGCCTGGCTGGTGTGCCCGGCAGAGTCCCTGCT
AGTTGCATAGCTATGCACCTGCGTGATGTGATGAGTGGACGATTGCAGCA
ATCAATGTCTTTGTGTTTGTATGATATATACGGCCGGTAACTTGCTGTGG
TTCTTCATGAGATACTACAGTCAGCGGAAACAATGTGAGGGTTATTGCGG
CTGGACCAACAACTGCAACAGATAAACGACGATAAAGACAGTATGTTATA
CACGAAAGGAGGGGCGGATGCATAAGAAGGGAGGGATGGCTAGTGTGACC
AGCAGAGTGCCTGCTGGCAATAAAGTGGTGGCACAAGGAGTGCTAGCTAT
CATCATAGAGAGAGACGGTGTGAGATAGATGCAGTGCGAGGTAACGGAGC
AACCTCCTCGTATGACTGATGTTGTACCATTATACATACCATCACAACAC
ACCGGGGGAAAAAACAAAGCGAAAAAACAAAAAAACGAATAATAACAGCA
ATCAATATATTATTAGGCTGTCTACTGATAAGTTTGCTCTGTACTCCCTG
TAGCCTGAGTGCGAATCCGCATGGTGTCGTCTTTTTTTCTGAAGCCACAG
GTACTTCTACTACACCAGGTCCTACTCCTGTACTACTATTATACTACTAT
TACTACTACTGTACAGTTCTACAGGTATCATTTATTTATAGCGTATCATT
CTACTGTGATGTGGCCGTACTGTACTCCTGTACTATTACTGTAGTATTGT
AGTCCTGCTGCGGTTCTAAAATCGGAGACCGTAGAATATTGGCAAACTGC
GCTTAGATACAAGAAACGCCCATTAATACCATTTTTTGGGGACGATATGA
TATTATCAGTGCCATGTCTTCTGCTTGGGTTTCGTCTCGCCTCTATTGTT
GAAAGCACGTTGAAAGCAAGTACGTGTAACTCTTTAGGCACGATGTTTAC
GCCATCGACACGTTGCCTGCGGATTTCCTTTCAAACCCTTGGCATGCGCC
CTAAAATCCTGCGAGCCTGCCGGGCAGTTCACTGCAGTTCACTGCCCGGC
AGGCGCCCTTGTATATATATATATATTTATTATTTTTACTTACAAAGACA
TGAGCCGTGACGTTCCAAACTGGTTCGGGGGCTAGGGGATAATCGTCAAC
CTCACTGTGTGATGCATCGGTCGCGCGGATTCTATCGGTCCTCAGATAAG
TTATAACGCAGTGGCTTCCCTGGGGTGTCCCAGGCTCTACAGGATAATTT
TGGGAAACAGGCCCCATCATCGTGTGCACTGGATTATGATCTTTCGGAGG
GGGACGGGAAATAACTGCGCATGTGTGGGATATTCACGTCATGAGTACGT
ATCTGAACCTATACTATGGGAGTTAACACTTGCTACGCACACTAGATACG
AAGGCAACGACGTTATCGGTGTGACCAATACACCAATACACTACCACGCC
AATCTTACATGACGTTATCGGTTTCACCAATACAGCAATACACTACCACA
ACAAACTTACATCACATACAACTCCGAAGGTAGCATGTTATCGGTGTCAT
CACTACAATTAAATCACATTACATACAACTACGAGGAGACACCAAACAAA
ACCAAAATCAAAACCCGAAACCCAACAGTGCCAAGTATTTCATACTCAAT
TTATAAAATATGGTAAAACACCAACAACATTGTAGAATGCTACAGTACTC
TACTACAACAAACAAGTAAACATAGGCAAACAAGCAACGAAAAGCACCAG
TCAATGATTTAGCATTTTTATTTTATTTACGAAGGCATGAGGCACCAAAC
AGAAGCAAAATCAAAACCAAAACCCAAAACCCAACAGTGTCAAGTATGCG
TACTCAAATGATAAAATTATGGTAAACACCAACAATATAGATAGGAGGTA
TTCTATCTCAACAAATAATTGAACATAAGCAAACTAGCAACGAAAAGCAG
TAATGGCTGTAATATTATTATTGCTCTGCGGGATAGTTTAGGGAAGGCAT
ATATACATGATACTTGGAACAGCATCACTCCATTTTTATCACGCTTTCAA
CATGACACACAAGAACGACATCATCATGTTCATGGATCTTGGAATCCCTC
CGTTGAGCGGGGCGGAGTAAGCCGCAGAAACCTTGTAATCCTAGTATTTT
TGTTGAGGCCCCGGTATCGTAGGAACCAATCACAAGACCAGATGCATTTT
TTTTTGTTATGTTTTTTTTTCATGATACGAGCCGGCTTCAACAAGAAGCA
TAACGTTCACATTCCACCTCCGGGGCTATTTCTTGGTGGATTCTTGGCAC
AAAATTTGACGCTGAACATATCGAATTCATCGCATCACCAAGGAGAGAAC
ACTTCGATGGAGGTTGATTAGGCGTGCGAGCCCTGTATTGCGAGTTATGG
AGGCAAACACGATTACTGTACTAAGGGATACTTTTTGAACCATTGAATTT
TTTTGTGTCATTTTCGGCAAAATAACAGCTGGGTTTTGTAGCGCAAACTA
AAACGCTTTATTCACAATGGATTTTGAATTTCGGGTAGAGGAAAATGACG
TTCATGTTTTTCATAATTTACGCATAAAAAATACGTCACTTCCCAATTTT
AATGTTCAAAACTATTTTTTGTCTCAGGGTTAAAGATTATCATTGTAGAA
CCTGGACATTTAGTAGGTGAACAAGCTATAGGTGTTTCGCTTGGTGCTAA
AACCTTTTTTGCGCCATGATTTTTGAGAATTGCGACACAAAACTTGGCAA
GGTTGTTATTCATGACAAGATGAACGACAACTCTATCGCTGGCCTTTGTT
GAAACAAATGAGTTTTCGTGCGTCGTGTAGTGTCAAAAGTTGCGGAAAAA
ATAAAATAAAAACGCAAGAAGGCACCTCTGCGAGTACAAAATCATTTTTT
CCAAAAAGGGCAGCCATACTTTAATTTACTATTGACATGGAGACCAATAA
TGCCAAATTTTGTTCCTATATCTAGAAAATCATGGCGTGTAAAAACGCAA
AGAAGTTGTGTCACGTGTGTTGCTGGAACCATCTCGTACTGATTTTTTTG
TTTTTTGTTTTTATGCTGGCCAGATCTGCGTGTTGGCTGGGGGATGGCTC
CGCTCTGAAAGCGCGTGATCTGACTATTGTCTCGGTATTTTACGACGCAC
GAAAAAGTATGAACACCTGTCGAAATCCTTCTCCTCGTTCTCCTGCTGCT
GCTTATCCTTTCCGTCCCTCGTCTAATGTCACATTTTCTTTTTGTTTTCA
ACCTTTGTGTGTTCGCTCGCATGTCTTGTCTTGTCTTGTCTTATCTTTTT
TTTTTTTTTTCAATTGTTTTTGCCAGTGGATAACCAAGATGGACCCGGAC
AATATGTACATCAGCCACCGCTTGTACCGCGATGGGACAAGGTTTGTCGA
CGGCAAGTACGTGAAGGACTTGACTTCCCTCAACCGGCCTTTGGAGCAGC
TCGTGATCGTCGATGACAACGACGACTGCATTTCTATGCAGGTAGGTGCA
AGGGGGAATTTTTTCCCAGCTGCTTTAGCGTTTTTTTTTTGTAGGACGGA
TATTGTCAAAGGTTTTGACTCTTACTATTACAGTGTGTTCGTTATAGGGG
TTAGGGTTTTTATTTTCATTTTTATTTTTTTTATTTCCGTCGCATTAGCC
CGATCGCGCGGACCCGTGGTCACAAAGGTAGGCACCTTTTTTTATACCGA
ATAAAAACGAATAAAAACGACCCCTCCGGCCCCTCTCCACAACAAACTCA
AATACCCCCCCACTGATTTCATACCGTATCATTAGTGGTAGAATTTTTGG
GACTGCTGAACAGCCCACGTCGTTACTAATCATACAGATTAAACGTGAAG
ATCCAGCCTACAAAAACGCTAAGGCGGCAGGCGGCTCATTTTTCCTGCTG
TTATTTAGTGTGCGTGTGGTTGGTGGTTGTTGTGGTGTCAAGAGTTTCTG
GTACTGCTGCTGCTGCTGCTGCGTTTTTTTATTGGTACTGTACTTCGAAG
TATTTTTTTGAGCTGTTACTATTTTACAACGCTCGGTCGAGACTACTAAT
GTATCAACGCAACACACCATCTGTCCATATTTGTGTGTGTGTTCGATCCG
GCCAGATCAAAGGATCACCTGTGTCTTGAACACTGTCACTGTTGTTCCAA
CGGCCTCTGGGTGTGCGCCCCCTACACGACAAGCACGATGTCCTCTACGT
GGGGTAGTATCGGAATACGACGGGAATTATTGTGCAATTCGCACCTTGTT
TTTTTTTTTGTTGCTTTTCTGTGGTTTCCGGATCTTCGTACATACCGGGT
AGGGCTCAAGCACTTTTGTGACACGAGCCAATGTGATGAAATCAGAAACC
AAATCAAAATCAACCCAACGTTGTGTGGGTGGACGCCCAGGTGGCACACG
CATGCAGCAAAGAACACATGGACTAACATACACTTGTTTTCTTACAGTAC
AAGTAAGGACTCAACCAGAACCCCAAAGGCACCGTGTGGGAGGTTTTTGT
TGCTTGACGCACAGACATCAGTAGTAGTAGTAGTACGCGTACAGCACATA
CGAAGTATATATCAAAGGCTTTGGACTTTGCAGCATGGTGCAGCACAACA
ATGTTTTGTTTTGTTTTGTTTTATTGCTGTATCTCCTCTTGTCGTAGTTT
TTGCTTGCCTGGACCAACATCAGGTTTGTTTTCGTGTTATTGCCTCGCGT
GTATCAGCAGTTCCCCCCTTTGTTTCTTGTACTCGCGGACCTTCTGCGTC
CCTGCCTGCCTTGTTTCTACTGACGCGTTGCTCTCATGTGTGTTGTGGCG
ATAGTTGTTTTTTTTGTTATCAACCATTGTTATCAACCATTGTTATCCTC
CGGCGGATGGGTAAAAATAAAGCTTGAGCTCCACTAATTTCCACGATTCA
GCTTTTTTTTTATGTTTTCTGTCTCATTTTTTTTTTTTTAAAAGCATTTT
TACCGTGTTTTGTGCCGATTCTCCCCCTCTTGGTTGTAGAACACAACGGC
CGATAGAGATTGTTCCCCTCTCGCCTCCTGAACACCCGAAGGCGAAACCC
TGCACTCTTGCATTACTTGTGCTCCTTGTTATTATTATTATTATTATTAT
TATTATTTCCGTCACATTAGCCCGATCGCGCGGACCCGTGGTCACAAAGG
TAGGCACATTTTTTGATACCGAATAAAACCGAAAAAACCGACCCCTTACC
GGGGAAAAACGAAAACTGTGTGTACTTTTTTACTTACCCACGTCCTAATT
ATCTCCCCCTATCCACAGCCGGAAAACGCCCTCAAAGTGCCGATGTTCTC
GCTGGAAGAGGGATCAGACCCGACGGCAGATACGGTGTTGTACGAGTTGG
CCCCCTTTCTCAGGGCGCTGGCAATGCAGGTGGGTGAGCTCTTTGCTCAG
AAAGTGTACGAGCTTCGTATCAGTAGCTCTCTGTAGTATATTAACCGGCA
AGCCAAGTAATGAATAGTGTGGAGTATAGTGTGGAAGGTGTTTTGGAACA
CACTACTTTTCGTTGCTACGAATACAAAACAAAAAAAATCATAATTTCAC
GTCCGGCGGAGACGATATAATTGTTGTTGGGACCACTGTTTGTCTTGTAC
CGGTCTCCAGCACAACGATGCTACAAGGACGGTAGTATTTCACCTTGACT
GACGACGAGTCAAGGAAGTCCTATACTAAAACTAGTATATTAACACCGAT
AAAGGCCTTGACGAAGGGGGTGGGGGGGGGGGCAGTTTTTCCCCTTGATG
AACAGCCAGTTTAGGAAGCCATATACTGAAACTAGTATATCAACGCTGAT
GCCTTGGCGGGGGAGGGGCGGGGGGGGGGGAAGGGTTACGACGCGCCCCC
CTAACATGCTTGCTCTCCAGTGGCTGTCAGTGTGGTGTAAGTGTGTGGGG
AGGCGTGTTGCCCGGTGGCTAAATTTTGGACACGGACGGACCTGTCCACG
GCGTGCCTGTGGCAGAACGAGGGCGAGTTGGTGTTCGTTTGTACGATGGG
AGACTCCGTTGTATGGGGTGGGAGAGTTGATACGTCTCCTATAAGAGCGG
CACAGGCGTGGACCGAGGGCTCCGCGCGAGGTCTAGGTGTGGGGAGAGCG
GCAAGTGTCTGCCGGTCTGGGTAGGCAAAAAGGTCTTGATTATTGACGGG
AATGCATGGTGTGGTGTGTTCATTAGTAGCCCACGCCGTGTAGAATTGAT
AAGGGCAAAGAGCAGCGCATGCAGTGACTTGTGATAAAACGCTCACCCGT
CTTGCCCCTCGCTCGCGAGATCCAGGGCGGATTCTTTGTACTTGCTCATT
TATTTACACGGCCCTCATTTCTTACATTTCCGCCCCCCGGTGGGCTTGAC
TCGTGTGTGTGGGCCTCTCGCTAAACAGGGCGTCGCCGACTACCGCAATG
TCCTTCGCCCGCACATCGGCGAGGATTACTCGGCGGTGGTTTCCGACTTC
CGCTCGAAGGTCAACTCCGTGCGGCACAAAGAGGAGACAGAGAGAGCTCG
GGGGCTGGGGGGGCTGGTGCGCCAGATAGCGCCCGCCGTAGGCTCGAGCG
GGCTTTCCGCCGGAGGGATGATGACCAGTAAGGACATCGTGGGGGATGCA
CCCGACAAGCTGTCGCCTGCCATGGCGGCGGCGGTCGCCGC back to topCoding sequence (CDS) from alignment at D-herbacea_F_contig106:411003..427293- >mRNA_D-herbacea_F_contig106.622.1 ID=mRNA_D-herbacea_F_contig106.622.1|Name=mRNA_D-herbacea_F_contig106.622.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2964bp|location=Sequence derived from alignment at D-herbacea_F_contig106:411003..427293- (Desmarestia herbacea DmunF female)
CAGTTGGCTACTCGTACAGCTTCCACGAAACGTACCATGCTTCTCGGACG
CGTGGCCGCAATTGCATCTGGCAGTTGGCTACTCGTACAGCTTCCACGAA
ACGTACCATGCTTCTCGGACGCGTGGCCGCAATTGCATCTGGAAGCACTA
GCGCTGGAACCCCCTCCGCGTGCAGGACGGCAGCTCAACGCCGCTTCCTC
GCCAAGGGAGTTACGAAAGGGAAGAAACCAGGGGGACAACAGCCGGCAGG
GGCACGAGGTGGAGGAGGAGGAGCAAAAGCTGGCTCGACGAAGAAGGCCG
CTACCGAGCAGAGCAATGCTTCAGCCAAAGCAAAAGACGTAGCAACGCCA
GCCGCCTCGGCGGCGGCAACAACAACGGCAGGCGGCGTAACACCCAACAC
TGCTGCAGCTACTGCTAGTACTACTTCTCGCGGCGGTTTCACCAAGAGCG
AAATGCTGGCCGCAAGACAGGCGAGAAAGGCGAGCGCGGCAAAGTCTAGC
GCTGCCGCGGCCGCAACGGCTGCGACGAAGGCGGCGGAAGCCGCGCGGCT
GGGGAAGGGGGCAGGGGCGGGGGTGGGAGTGGGGGCGGGCGTCGCGGCGG
GGGGAGCTAAGAGCGGAGAGAGAGGGAAGTGGGGGTGGGGGTCTAAAGCG
CTGGCGGGATCGGCGACGGGGATAGCTATACTAGGCGTCGCCTGGCAGCT
GAAGCCGGATGAAGTGAGGAGGCTGTTGGACGACAGCCCGATTGACCACT
TGGCCGTGTGGGCGATGGGAAAGTACCAGCTGAAGCACTAGCGCTGGAAC
CCCCTCCGCGTGCAGGACGGCAGCTCAACGCCGCTTCCTCGCCAAGGGAG
TTACGAAAGGGAAGAAACCAGGGGGACAACAGCCGGCAGGGGCACGAGGT
GGAGGAGGAGGAGCAAAAGCTGGCTCGACGAAGAAGGCCGCTACCGAGCA
GAGCAATGCTTCAGCCAAAGCAAAAGACGTAGCAACGCCAGCCGCCTCGG
CGGCGGCAACAACAACGGCAGGCGGCGTAACACCCAACACTGCTGCAGCT
ACTGCTAGTACTACTTCTCGCGGCGGTTTCACCAAGAGCGAAATGCTGGC
CGCAAGACAGGCGAGAAAGGCGAGCGCGGCAAAGTCTAGCGCTGCCGCGG
CCGCAACGGCTGCGACGAAGGCGGCGGAAGCCGCGCGGCTGGGGAAGGGG
GCAGGGGCGGGGGTGGGAGTGGGGGCGGGCGTCGCGGCGGGGGGAGCTAA
GAGCGGAGAGAGAGGGAAGTGGGGGTGGGGGTCTAAAGCGCTGGCGGGAT
CGGCGACGGGGATAGCTATACTAGGCGTCGCCTGGCAGCTGAAGCCGGAT
GAAGTGAGGAGGCTGTTGGACGACAGCCCGATTGACCACTTGGCCGTGTG
GGCGATGGGAAAGTACCAGCTGTATTCGAGCCCGGTCAAGGATAAGCTCC
TACCCGACTTTCCTGTTCCACCGGGAGCGCCAACTCCGCCCGTGCTTGTG
CTCGACCTGGAGGGCACGCTGTTGGGCACGATATACACCCGCAAGAACGG
TATTCGAGCCCGGTCAAGGATAAGCTCCTACCCGACTTTCCTGTTCCACC
GGGAGCGCCAACTCCGCCCGTGCTTGTGCTCGACCTGGAGGGCACGCTGT
TGGGCACGATATACACCCGCAAGAACGGGTGGAGGGTTGCCAAGCGACCA
GGGTTGGACGAGTTTCTGAAAGAGATGGCCCAGCTGTACGAGATAGTGGT
GTTCACTGACAGCTTCGGAGGGTTGGCTGAAGAGGTGGAGGGTTGCCAAG
CGACCAGGGTTGGACGAGTTTCTGAAAGAGATGGCCCAGCTGTACGAGAT
AGTGGTGTTCACTGACAGCTTCGGAGGGTTGGCTGAAGAGTGGATAACCA
AGATGGACCCGGACAATATGTACATCAGCCACCGCTTGTACCGCGATGGG
ACAAGGTTTGTCGACGGCAAGTACGTGAAGGACTTGACTTCCCTCAACCG
GCCTTTGGAGCAGCTCGTGATCGTCGATGACAACGACGACTGCATTTCTA
TGCAGTGGATAACCAAGATGGACCCGGACAATATGTACATCAGCCACCGC
TTGTACCGCGATGGGACAAGGTTTGTCGACGGCAAGTACGTGAAGGACTT
GACTTCCCTCAACCGGCCTTTGGAGCAGCTCGTGATCGTCGATGACAACG
ACGACTGCATTTCTATGCAGCCGGAAAACGCCCTCAAAGTGCCGATGTTC
TCGCTGGAAGAGGGATCAGACCCGACGGCAGATACGGTGTTGTACGAGTT
GGCCCCCTTTCTCAGGGCGCTGGCAATGCAGCCGGAAAACGCCCTCAAAG
TGCCGATGTTCTCGCTGGAAGAGGGATCAGACCCGACGGCAGATACGGTG
TTGTACGAGTTGGCCCCCTTTCTCAGGGCGCTGGCAATGCAGGGCGTCGC
CGACTACCGCAATGTCCTTCGCCCGCACATCGGCGAGGATTACTCGGCGG
TGGTTTCCGACTTCCGCTCGAAGGTCAACTCCGTGCGGCACAAAGAGGAG
ACAGAGAGAGCTCGGGGGCTGGGGGGGCTGGTGCGCCAGATAGCGCCCGC
CGTAGGCTCGAGCGGGCTTTCCGCCGGAGGGATGATGACCAGTAAGGACA
TCGTGGGGGATGCACCCGACAAGCTGTCGCCTGCCATGGCGGCGGCGGTC
GCCGGCGTCGCCGACTACCGCAATGTCCTTCGCCCGCACATCGGCGAGGA
TTACTCGGCGGTGGTTTCCGACTTCCGCTCGAAGGTCAACTCCGTGCGGC
ACAAAGAGGAGACAGAGAGAGCTCGGGGGCTGGGGGGGCTGGTGCGCCAG
ATAGCGCCCGCCGTAGGCTCGAGCGGGCTTTCCGCCGGAGGGATGATGAC
CAGTAAGGACATCGTGGGGGATGCACCCGACAAGCTGTCGCCTGCCATGG
CGGCGGCGGTCGCC back to top
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