prot_D-herbacea_F_contig106.621.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig106.621.1
Unique Nameprot_D-herbacea_F_contig106.621.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length633
Homology
BLAST of mRNA_D-herbacea_F_contig106.621.1 vs. uniprot
Match: D8LBI1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBI1_ECTSI)

HSP 1 Score: 547 bits (1410), Expect = 5.810e-187
Identity = 357/638 (55.96%), Postives = 409/638 (64.11%), Query Frame = 0
Query:    1 MLRKGVLRVASYAQVQRLYVG--QGGSGATIGARVWFSATNTSGSPTDNDDPTPAETKLAFTSTVYGKDPASAAELTVAQAAAAEDLKRTAAAAAKSAVAGAGAPASQSHDARAMFDSAMSQQAEDGKSSDSVKRDVAADTPDATRVAFRASAYGKDPEADAAHSEQE---VESLRSRVTGSS-RRTGAAPVHDSRNMFDSDLTQGAGSARASDSIKREVVTDTPDATRVAFRASAYGKDPQAAAAHSAQEAAEVEVLRKSAGRGAGAGSTTAAPVHDSRSMFDSDLTQSSGSTRGSDSIKRDVVADTPDATRVAFRASAYGKDPQASAAHTAEVAAEVAALRKTAGGGEGAGARSAAAAPVHDSRSMFDSDLTQGVGSARASDAIKRDVAADTPEATRLVFGGSDYGKDPSSMTRTAEKQEEMEALAKRAGAGTATADAAPIHDSRSMFDSDLTQSAGAVRDSAAINREVTAGTPDTTRLAFKASVYGKDPTLARLHVDEDTKADVQMLRERSGGVRGGAGPVVEAGGRQAQAPVHHDRSMFDSDLTQGAGAVEESTAIKRHVEADTPDLTRLSFFGSTYGDGAAVDEKEADDAEGLASKQTKGKKLATVGRGARGSKIHDTKRAMADETYSQAGSE 632
            MLR+G+ RVA YA+ Q+      +    A  G R W SAT+  G  +D+DD TP +TKLAF+S+VYGKDPAS  E T  +AAAA  LKR A    ++  A  GA A+  HD R MFDS++SQQAEDGK S S+KRDVAADTPDATRVAF A+AYGKDPEA AA S QE   VE+LR+R  G       AAP+HD RNMFDSDLTQGAGS +A D+IKR+V TDTPDATRVAFRASAYGKDPQ AAA S QEAAEVE LR    R  G G+  AAPVHDSRSMFDSDLTQ +GST+GSDSIKR+V  DTPDATRVAFRAS YGKD QA+AA + + AAEV  LR  A    GAGA SA AAPVHDSRSMFDSDLTQG G+ + SD+IKR VAA+TPEATRLVF GSDYGKDP S+  + +K+ E+ ALA+R GAGT  A                                                                                             A AP+HHDRSMFDSDL +GAGA  ESTAIKRHVE  TP LTRLSFFGSTYGD      K AD A+ LA KQ KG KLA VG G + +K+H+T++AMAD+ YSQAGSE
Sbjct:    1 MLRRGIFRVAVYARSQKTCAAGVKNLPAAAAGTRAWLSATS-GGDSSDSDDVTPPKTKLAFSSSVYGKDPASGGEPTAEEAAAAAQLKREA----EAGTAREGAAAAPVHDNRNMFDSSLSQQAEDGKESGSIKRDVAADTPDATRVAFGATAYGKDPEAAAALSAQEAEEVEALRARAKGDGVAGAAAAPLHDRRNMFDSDLTQGAGSTQAFDAIKRDVKTDTPDATRVAFRASAYGKDPQTAAALSEQEAAEVEALRM---RAQGRGAAAAAPVHDSRSMFDSDLTQGAGSTQGSDSIKREVSGDTPDATRVAFRASVYGKDGQAAAALSEQEAAEVDELRVRA---HGAGASSADAAPVHDSRSMFDSDLTQGAGAMQGSDSIKRHVAANTPEATRLVFAGSDYGKDPRSVDNSEKKKAEIAALAERVGAGTPAA---------------------------------------------------------------------------------------------AAAPIHHDRSMFDSDLAEGAGAARESTAIKRHVETATPALTRLSFFGSTYGDDDPGSNK-ADHAQALAEKQKKGAKLARVGAGVQSAKVHNTEKAMADDEYSQAGSE 533          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig106.621.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBI1_ECTSI5.810e-18755.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig106contigD-herbacea_F_contig106:405436..408830 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig106.621.1mRNA_D-herbacea_F_contig106.621.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig106 404502..410561 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig106.621.1 ID=prot_D-herbacea_F_contig106.621.1|Name=mRNA_D-herbacea_F_contig106.621.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=633bp
MLRKGVLRVASYAQVQRLYVGQGGSGATIGARVWFSATNTSGSPTDNDDP
TPAETKLAFTSTVYGKDPASAAELTVAQAAAAEDLKRTAAAAAKSAVAGA
GAPASQSHDARAMFDSAMSQQAEDGKSSDSVKRDVAADTPDATRVAFRAS
AYGKDPEADAAHSEQEVESLRSRVTGSSRRTGAAPVHDSRNMFDSDLTQG
AGSARASDSIKREVVTDTPDATRVAFRASAYGKDPQAAAAHSAQEAAEVE
VLRKSAGRGAGAGSTTAAPVHDSRSMFDSDLTQSSGSTRGSDSIKRDVVA
DTPDATRVAFRASAYGKDPQASAAHTAEVAAEVAALRKTAGGGEGAGARS
AAAAPVHDSRSMFDSDLTQGVGSARASDAIKRDVAADTPEATRLVFGGSD
YGKDPSSMTRTAEKQEEMEALAKRAGAGTATADAAPIHDSRSMFDSDLTQ
SAGAVRDSAAINREVTAGTPDTTRLAFKASVYGKDPTLARLHVDEDTKAD
VQMLRERSGGVRGGAGPVVEAGGRQAQAPVHHDRSMFDSDLTQGAGAVEE
STAIKRHVEADTPDLTRLSFFGSTYGDGAAVDEKEADDAEGLASKQTKGK
KLATVGRGARGSKIHDTKRAMADETYSQAGSE*
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