prot_D-herbacea_F_contig106.618.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig106.618.1
Unique Nameprot_D-herbacea_F_contig106.618.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length93
Homology
BLAST of mRNA_D-herbacea_F_contig106.618.1 vs. uniprot
Match: D8LBJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBJ4_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 8.940e-41
Identity = 64/87 (73.56%), Postives = 75/87 (86.21%), Query Frame = 0
Query:    1 MGVTAMLVGGTMGVVAKASMNNLMKVGMRRAPWEYVLGAGIGAYIGNKIPQWEDQLMLDINGMRADRNMPPAERVGGFAFGASMTES 87
            MG+TAM VGG  G+VAK ++N LMKV +RRAPWEYVLGAGIGAY+GNKIPQWE  L+ DIN MRADRNMPPA RVGG+ FG+S+T+S
Sbjct:    1 MGITAMTVGGAFGIVAKGTVNRLMKVSLRRAPWEYVLGAGIGAYVGNKIPQWEATLISDINEMRADRNMPPATRVGGYEFGSSITDS 87          
BLAST of mRNA_D-herbacea_F_contig106.618.1 vs. uniprot
Match: A0A6H5JVS4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS4_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 2.230e-23
Identity = 45/57 (78.95%), Postives = 51/57 (89.47%), Query Frame = 0
Query:   31 APWEYVLGAGIGAYIGNKIPQWEDQLMLDINGMRADRNMPPAERVGGFAFGASMTES 87
            APWEYVLGAG+GAYIGNKIPQWE  L+ DIN MRADRNMPPA RVGG+ FG+S+T+S
Sbjct:  590 APWEYVLGAGVGAYIGNKIPQWEATLISDINEMRADRNMPPATRVGGYEFGSSITDS 646          
BLAST of mRNA_D-herbacea_F_contig106.618.1 vs. uniprot
Match: A0A7S2V622_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V622_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 7.330e-17
Identity = 36/84 (42.86%), Postives = 54/84 (64.29%), Query Frame = 0
Query:   13 GVVAKASMNNLMKVGMRRAPWEYVLGAGIGAYIGNKIPQWEDQLMLDINGMRADRNMPPAERVGGFAFGAS----MTESTSKDE 92
            GV  KA  N++MKV +RR PWEY++   +GAY+G K+P+W+  L+ +IN M  +R +PP +  G F+ G+     MT S S D+
Sbjct:   18 GVALKAMTNSVMKVPLRREPWEYLMFGALGAYVGYKMPEWQQNLIDNINEMHEERGLPPLDVDGQFSLGSKFKQLMTYSASTDD 101          
BLAST of mRNA_D-herbacea_F_contig106.618.1 vs. uniprot
Match: A0A1E7EW66_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EW66_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 1.860e-6
Identity = 26/71 (36.62%), Postives = 42/71 (59.15%), Query Frame = 0
Query:    1 MGVTAMLVGGTMGVVAKASMNNLMKVGMRRAPWEYVLGAGIGAYIGNKIPQWEDQLMLDINGMRADRNMPP 71
            MG+T ++VGG++G  A+   N + K+   R PW +VL    GAY   K    ++ L+ D+N +RA + +PP
Sbjct:    1 MGLTTVVVGGSLGFAAQCISNAIQKIPTSRQPWMHVLCTVGGAYGATKWVSAKEDLLADVNEIRAYKGLPP 71          
BLAST of mRNA_D-herbacea_F_contig106.618.1 vs. uniprot
Match: A0A5J4XJJ5_9CHLO (Excitatory amino acid transporter 1 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XJJ5_9CHLO)

HSP 1 Score: 49.3 bits (116), Expect = 8.860e-6
Identity = 26/73 (35.62%), Postives = 44/73 (60.27%), Query Frame = 0
Query:    9 GGTMGVVAKASMNNLMKVGMRRAPWEYVLGAGIGAYIGNKIPQWEDQLMLDINGM---RADRNMPPAERVGGF 78
            G  +G+      N L KV + R PWE+++  G GA++GNKI ++E++   ++ GM   RA+RN    +++ GF
Sbjct:    8 GACIGLSINLYSNALRKVPLMRQPWEHLIAIGGGAWVGNKIVEYENRTAKELEGMLAKRAERN----QKLEGF 76          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig106.618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LBJ4_ECTSI8.940e-4173.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JVS4_9PHAE2.230e-2378.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2V622_9STRA7.330e-1742.86Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1E7EW66_9STRA1.860e-636.62Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A5J4XJJ5_9CHLO8.860e-635.62Excitatory amino acid transporter 1 n=1 Tax=Trebou... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig106contigD-herbacea_F_contig106:300193..302565 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig106.618.1mRNA_D-herbacea_F_contig106.618.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig106 300114..302574 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig106.618.1 ID=prot_D-herbacea_F_contig106.618.1|Name=mRNA_D-herbacea_F_contig106.618.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=93bp
MGVTAMLVGGTMGVVAKASMNNLMKVGMRRAPWEYVLGAGIGAYIGNKIP
QWEDQLMLDINGMRADRNMPPAERVGGFAFGASMTESTSKDE*
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