prot_D-herbacea_F_contig106.610.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-herbacea_F_contig106.610.1
Unique Name	prot_D-herbacea_F_contig106.610.1
Type	polypeptide
Organism	Desmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length	249

Homology

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BLAST of mRNA_D-herbacea_F_contig106.610.1 vs. uniprot
Match: A0A6H5KPI6_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPI6_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 6.240e-87
Identity = 146/226 (64.60%), Postives = 167/226 (73.89%), Query Frame = 0

Query:   50 DRDVPRFLRPVILFLSLSLLALFGTRVGRGIR--------------------------MFGPSAYAAGGAALPEAVVDDIFDRADTDHDGVIADTEIQHLVEGAGGTLLDDASEIEAGVRSVFRNLDQNADHSLSRSDLLSYWGRLGTLLTVDEVAQWVVHAVQLPQDVADIFRNNMVTGYDFPELAADQGVQLEQDLGVTRPAYRKRLVRSMKWKLWAMGEEPAA 249
            DR+VPRFLRPV++ L+LSLLA+ G                                  +FGP+AYAAGG  LPEAVVDDIF+ AD D +GVI D EIQ+LVE AGG+ LDDASEIEAGV SV +NLD+NADH+LSRSDL  YW RLGTLLTVDE AQWV+HA QLPQ+VAD F NNMVTGYDFPELAA QG  LEQDLG+TRPA+++ LVRSM+WKLW MGEEPAA
Sbjct:   10 DREVPRFLRPVMVLLTLSLLAIGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGPAAYAAGGVQLPEAVVDDIFEHADKDKNGVIGDEEIQYLVERAGGSRLDDASEIEAGVASVIKNLDRNADHALSRSDLNVYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLGITRPAFKRNLVRSMQWKLWGMGEEPAA 235

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BLAST of mRNA_D-herbacea_F_contig106.610.1 vs. uniprot
Match: A0A7S4V3N0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V3N0_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.340e-32
Identity = 66/152 (43.42%), Postives = 94/152 (61.84%), Query Frame = 0

Query:   97 EAVVDDIFDRADTDHDGVIADTEIQHLV-EGAGGTLLDDASEIEAGVRSVFRNLDQNADHSLSRSDLLSYWGRLGTLLTVDEVAQWVVHAVQLPQDVADIFRNNMVTGYDFPELAADQGVQLEQDLGVTRPAYRKRLVRSMKWKLWAMGEEP 247
            EA     F   D D DG++   E+ + + E  GGT  D  +E+E GV  +   LD+N D  L +SD+ +YW  L +LL  DEVA WVVHAVQLP+ + +IFR NMVTGYDFPEL  + G  +  +LG+ R ++RK++VR +  ++  +G  P
Sbjct:  134 EASAFSFFSSVDEDGDGMLEPPEVANFLRESIGGTAFDTQAEVETGVNKIMEKLDRNHDLGLDKSDVEAYWKHLESLLNADEVADWVVHAVQLPEYLGNIFRENMVTGYDFPELVENDGEAIRTELGIERSSFRKKIVRHIHARMLGIGSTP 285

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BLAST of mRNA_D-herbacea_F_contig106.610.1 vs. uniprot
Match: D8LHW7_ECTSI (FYVE zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHW7_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 1.540e-30
Identity = 67/144 (46.53%), Postives = 97/144 (67.36%), Query Frame = 0

Query:  104 FDRADTDHDGVIADTEIQHLVEGAGGTLLDDASEIEAGVRSVFRNLDQNADHSLSRSDLLSYWGRLGTLLTVDEVAQWVVHAVQLPQDVADIFRNNMVTGYDFPELAADQGVQLEQDLGVTRPAYRKRLVRSMKWKLWAMGEEP 247
            F+  D + DGV+A+ EI+  V   GG+ LDD SEI  GV +V   LD ++D  +   +L S+  RLG +LTV+E A WV HAVQLP++VA+ FR+N ++ YDFPEL  D G  L  DLG+ R  +RKR+V++++ +L  +G+EP
Sbjct:  145 FNSLDENSDGVLAENEIREFVGYVGGSSLDDNSEILGGVSTVMGRLDTDSDKGIGLKELSSWINRLGPMLTVEEAADWVSHAVQLPREVAEAFRSNSISAYDFPELVEDNGAGL-YDLGIKRK-FRKRIVKAIEVRLLGLGDEP 286

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BLAST of mRNA_D-herbacea_F_contig106.610.1 vs. uniprot
Match: A0A7S2CAD4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CAD4_9STRA)

HSP 1 Score: 121 bits (304), Expect = 3.260e-30
Identity = 62/154 (40.26%), Postives = 93/154 (60.39%), Query Frame = 0

Query:   98 AVVDDIFDRADTDHDGVIADTEIQHLVEG----AGGTLLDDASEIEAGVRSVFRNLDQNADHSLSRSDLLSYWGRLGTLLTVDEVAQWVVHAVQLPQDVADIFRNNMVTGYDFPELAADQGVQLEQDLGVTRPAYRKRLVRSMKWKLWAMGEEP 247
            A  D+ F   DTD DG + + EI+  V       G T ++D   IE+ V  +   +D N D  LS  ++ +Y  R+G +LTV  VA+WV+H +QLP++V ++FR+N VTGYDF EL  D G  L  D+G+TR  +RK+++R+MK  +  +G  P
Sbjct:   32 ASTDEFFTTMDTDADGQVEEFEIREAVAAFGSDGGATKVED---IESTVEDIMSRMDSNTDGLLSDEEIETYSKRIGAVLTVSAVAEWVIHGLQLPEEVGELFRSNSVTGYDFAELVEDDGAALGHDIGITRVVHRKKVLRAMKMLMTGVGNVP 182

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BLAST of mRNA_D-herbacea_F_contig106.610.1 vs. uniprot
Match: A0A6H5L898_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L898_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 7.450e-30
Identity = 66/144 (45.83%), Postives = 97/144 (67.36%), Query Frame = 0

Query:  104 FDRADTDHDGVIADTEIQHLVEGAGGTLLDDASEIEAGVRSVFRNLDQNADHSLSRSDLLSYWGRLGTLLTVDEVAQWVVHAVQLPQDVADIFRNNMVTGYDFPELAADQGVQLEQDLGVTRPAYRKRLVRSMKWKLWAMGEEP 247
            F+  D + DGV+A+ EI+  V   GG+ LDD SEI  GV +V   LD +++  +   +L S+  RLG +LTV+E A WV HAVQLP++VA+ FR+N ++ YDFPEL  D G  L  DLG+ R  +RKR+V++++ +L  +G+EP
Sbjct:  165 FNSLDENSDGVLAEDEIREFVGYVGGSSLDDNSEILGGVSTVMGRLDTDSEKGIGLKELSSWINRLGPMLTVEEAADWVSHAVQLPREVAEAFRSNSISAYDFPELVEDNGAGL-YDLGIKRK-FRKRIVKAIEVRLLGLGDEP 306

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BLAST of mRNA_D-herbacea_F_contig106.610.1 vs. uniprot
Match: A0A7S1B4T7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B4T7_9STRA)

HSP 1 Score: 125 bits (313), Expect = 4.420e-29
Identity = 73/193 (37.82%), Postives = 112/193 (58.03%), Query Frame = 0

Query:   56 FLRPVILFLSLSLLALFGTRVGRGIRMFGPSAYAAGGAALPEAVVDDIFDRADTDHDGVIADTEIQHLV-EGAGGTLLDDASEIEAGVRSVFRNLDQNADHSLSRSDLLSYWGRLGTLLTVDEVAQWVVHAVQLPQDVADIFRNNMVTGYDFPELAADQGVQLEQDLGVTRPAYRKRLVRSMKWKLWAMGEEP 247
            FL P  L L + +LA+F   V +  ++        G +   +      F   DTDHD  I   E+ + V +  GGT  D   EI++ V ++F++LD N D  +S  D+  +W +L  LLT DEVA+WV +AVQLP++VA+ FR+N VTG+DF EL  + G  LE+ LG+ +  +RK+L+R +K ++  +G  P
Sbjct:   18 FLDPTFLVL-IHILAVFIVIVAQDAQI--------GDSRRSDRTSTSFFSAVDTDHDDTIDLEELSNFVGKVIGGTQFDTPLEIQSEVNAMFKSLDLNHDKRISFKDVKEHWNKLECLLTADEVAEWVKYAVQLPENVANTFRDNAVTGFDFSELVVNNGEALERYLGIEKELFRKKLLRLIKARMLGVGTVP 201

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BLAST of mRNA_D-herbacea_F_contig106.610.1 vs. uniprot
Match: A0A7S4R8Z4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R8Z4_9STRA)

HSP 1 Score: 122 bits (305), Expect = 5.770e-28
Identity = 62/152 (40.79%), Postives = 95/152 (62.50%), Query Frame = 0

Query:   97 EAVVDDIFDRADTDHDGVIADTEIQH-LVEGAGGTLLDDASEIEAGVRSVFRNLDQNADHSLSRSDLLSYWGRLGTLLTVDEVAQWVVHAVQLPQDVADIFRNNMVTGYDFPELAADQGVQLEQDLGVTRPAYRKRLVRSMKWKLWAMGEEP 247
            EA     F   D D DG++   E+ + L E  GG+  D  +E+EAGV  V   LD+N D  L +SD+ ++W +L +LL  DEVA WV++AVQLP+ + +IFR N VTGYDFPEL  + G  ++ +L + + ++R++L+  +K +L  +G  P
Sbjct:  110 EASAFSFFRSVDHDGDGMLEPQELGNFLSESIGGSAFDTQAEVEAGVNKVMEKLDRNHDSGLDKSDVDAFWVQLESLLNADEVADWVIYAVQLPEYLGNIFRENSVTGYDFPELIENGGEAMKTELRIEQSSFRRKLIWHIKARLLGVGSTP 261

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BLAST of mRNA_D-herbacea_F_contig106.610.1 vs. uniprot
Match: A0A7S3V9U2_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V9U2_9STRA)

HSP 1 Score: 122 bits (305), Expect = 6.900e-28
Identity = 65/146 (44.52%), Postives = 90/146 (61.64%), Query Frame = 0

Query:  104 FDRADTDHDGVIADTE-IQHLVEGAGGTLLDD-ASEIEAGVRSVFRNLDQNADHSLSRSDLLSYWGRLGTLLTVDEVAQWVVHAVQLPQDVADIFRNNMVTGYDFPELAADQGVQLEQDLGVTRPAYRKRLVRSMKWKLWAMGEEP 247
            F+  D D DG I   E I  ++E  GG+  DD  +E++  V  + +NLD N D  L   D+ SYW +L +LLTVDEVA WVVHAVQLP  + DI R+  VTGYDFPEL  D G  L  +L +T  ++R +++R M+ ++  +G  P
Sbjct:  221 FNFVDRDGDGKIRRPELIDFVMENIGGSDFDDEVNEVKPEVDRMMKNLDLNNDDGLDTGDVTSYWEKLESLLTVDEVADWVVHAVQLPSYIGDIVRDKHVTGYDFPELVEDNGKALVDELHITEKSFRTKIIRLMQARMLGIGSVP 366

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BLAST of mRNA_D-herbacea_F_contig106.610.1 vs. uniprot
Match: A0A7S4R769_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R769_9STRA)

HSP 1 Score: 120 bits (301), Expect = 9.720e-28
Identity = 62/152 (40.79%), Postives = 94/152 (61.84%), Query Frame = 0

Query:   97 EAVVDDIFDRADTDHDGVIADTEIQH-LVEGAGGTLLDDASEIEAGVRSVFRNLDQNADHSLSRSDLLSYWGRLGTLLTVDEVAQWVVHAVQLPQDVADIFRNNMVTGYDFPELAADQGVQLEQDLGVTRPAYRKRLVRSMKWKLWAMGEEP 247
            EA     F   D D DG++   E+ + L E  GG+  D  +E+EAGV  V   LD+N D  L +SD+ ++W +L +LL  DEVA WV++AVQLP+ + +IFR N VTGYDFPEL  + G  ++ +L + + ++R++L+  +K  L  +G  P
Sbjct:  110 EASAFSFFRSVDHDGDGMLEPQELGNFLSESIGGSAFDTQAEVEAGVNKVMEKLDRNHDSGLDKSDVDAFWVQLESLLNADEVADWVIYAVQLPEYLGNIFRENSVTGYDFPELIENGGEAMQTELRIEQSSFRRKLIWHIKACLLGVGSTP 261

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BLAST of mRNA_D-herbacea_F_contig106.610.1 vs. uniprot
Match: A0A7S2KT34_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KT34_9STRA)

HSP 1 Score: 120 bits (301), Expect = 2.170e-27
Identity = 59/141 (41.84%), Postives = 91/141 (64.54%), Query Frame = 0

Query:  108 DTDHDGVIADTEIQHLVEGA-GGTLLDDASEIEAGVRSVFRNLDQNADHSLSRSDLLSYWGRLGTLLTVDEVAQWVVHAVQLPQDVADIFRNNMVTGYDFPELAADQGVQLEQDLGVTRPAYRKRLVRSMKWKLWAMGEEP 247
            DT+ DGV+   E+ + +  + GG+  D  +E+   V  +   LDQN D +L  SD+ S+W +L ++LTVDEV  WV++AVQLP+ VA+ F  + VTGYDFPEL  + G  +  +LG+ + ++RK+L+RS+  KL  +G  P
Sbjct:  127 DTNRDGVVKPNEMANFIRNSIGGSAFDTETEVNFEVERIMGELDQNQDENLDLSDVFSHWKQLESVLTVDEVKDWVLYAVQLPEKVANTFVEHSVTGYDFPELIENDGDAMRVELGIEKQSFRKKLLRSIHAKLLGIGSVP 267

The following BLAST results are available for this feature:

BLAST of mRNA_D-herbacea_F_contig106.610.1 vs. uniprot

BLAST of mRNA_D-herbacea_F_contig106.610.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 20


Match Name	E-value	Identity	Description
A0A6H5KPI6_9PHAE	6.240e-87	64.60	EF-hand domain-containing protein n=2 Tax=Ectocarp...	[more]
A0A7S4V3N0_9STRA	1.340e-32	43.42	Hypothetical protein n=2 Tax=Ditylum brightwellii ...	[more]
D8LHW7_ECTSI	1.540e-30	46.53	FYVE zinc finger protein n=1 Tax=Ectocarpus silicu...	[more]
A0A7S2CAD4_9STRA	3.260e-30	40.26	Hypothetical protein (Fragment) n=1 Tax=Florenciel...	[more]
A0A6H5L898_9PHAE	7.450e-30	45.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S1B4T7_9STRA	4.420e-29	37.82	Hypothetical protein n=1 Tax=Corethron hystrix Tax...	[more]
A0A7S4R8Z4_9STRA	5.770e-28	40.79	Hypothetical protein (Fragment) n=1 Tax=Ditylum br...	[more]
A0A7S3V9U2_9STRA	6.900e-28	44.52	Hypothetical protein n=2 Tax=Chaetoceros debilis T...	[more]
A0A7S4R769_9STRA	9.720e-28	40.79	Hypothetical protein (Fragment) n=1 Tax=Ditylum br...	[more]
A0A7S2KT34_9STRA	2.170e-27	41.84	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013761	Sterile alpha motif/pointed domain superfamily	GENE3D	1.10.150.50		coord: 175..240 e-value: 6.4E-11 score: 44.6
IPR013761	Sterile alpha motif/pointed domain superfamily	SUPERFAMILY	47769	SAM/Pointed domain	coord: 174..237
None	No IPR available	GENE3D	1.10.238.10		coord: 96..171 e-value: 3.3E-8 score: 35.1
None	No IPR available	PANTHER	PTHR15136:SF5	STROMAL INTERACTION MOLECULE HOMOLOG	coord: 100..247
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 74..249
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 56..73
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..55
None	No IPR available	TMHMM	TMhelix		coord: 56..73
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 100..165 e-value: 4.3E-9 score: 36.7
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 95..130 score: 9.994
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 137..172 score: 9.018
IPR037608	Stromal interaction molecule	PANTHER	PTHR15136	FAMILY NOT NAMED	coord: 100..247
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 108..120
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 150..162
IPR001660	Sterile alpha motif domain	PROSITE	PS50105	SAM_DOMAIN	coord: 173..237 score: 9.405
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 93..182

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-herbacea_F_contig106	contig	D-herbacea_F_contig106:190983..194779 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female	2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90	2022-09-16
OGS1.0 of Desmarestia herbacea DmunF female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-herbacea_F_contig106.610.1	mRNA_D-herbacea_F_contig106.610.1	Desmarestia herbacea DmunF female	mRNA	D-herbacea_F_contig106 190983..194779 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-herbacea_F_contig106.610.1 ID=prot_D-herbacea_F_contig106.610.1|Name=mRNA_D-herbacea_F_contig106.610.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=249bp
TSAASDSTPGWAERAGLTCGVPAGASAATATTTAAGGDIFDSSSCVFKKD
RDVPRFLRPVILFLSLSLLALFGTRVGRGIRMFGPSAYAAGGAALPEAVV
DDIFDRADTDHDGVIADTEIQHLVEGAGGTLLDDASEIEAGVRSVFRNLD
QNADHSLSRSDLLSYWGRLGTLLTVDEVAQWVVHAVQLPQDVADIFRNNM
VTGYDFPELAADQGVQLEQDLGVTRPAYRKRLVRSMKWKLWAMGEEPAA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011992	EF-hand-dom_pair
IPR001660	SAM
IPR018247	EF_Hand_1_Ca_BS
IPR037608	STIM
IPR002048	EF_hand_dom
IPR013761	SAM/pointed_sf