mRNA_D-herbacea_F_contig106.610.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig106.610.1 vs. uniprot
Match: A0A6H5KPI6_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPI6_9PHAE) HSP 1 Score: 280 bits (715), Expect = 6.240e-87 Identity = 146/226 (64.60%), Postives = 167/226 (73.89%), Query Frame = 1
Query: 148 DRDVPRFLRPVILFLSLSLLALFGTRVGRGIR--------------------------MFGPSAYAAGGAALPEAVVDDIFDRADTDHDGVIADTEIQHLVEGAGGTLLDDASEIEAGVRSVFRNLDQNADHSLSRSDLLSYWGRLGTLLTVDEVAQWVVHAVQLPQDVADIFRNNMVTGYDFPELAADQGVQLEQDLGVTRPAYRKRLVRSMKWKLWAMGEEPAA 747
DR+VPRFLRPV++ L+LSLLA+ G +FGP+AYAAGG LPEAVVDDIF+ AD D +GVI D EIQ+LVE AGG+ LDDASEIEAGV SV +NLD+NADH+LSRSDL YW RLGTLLTVDE AQWV+HA QLPQ+VAD F NNMVTGYDFPELAA QG LEQDLG+TRPA+++ LVRSM+WKLW MGEEPAA
Sbjct: 10 DREVPRFLRPVMVLLTLSLLAIGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGPAAYAAGGVQLPEAVVDDIFEHADKDKNGVIGDEEIQYLVERAGGSRLDDASEIEAGVASVIKNLDRNADHALSRSDLNVYWDRLGTLLTVDEAAQWVLHAAQLPQEVADAFVNNMVTGYDFPELAARQGALLEQDLGITRPAFKRNLVRSMQWKLWGMGEEPAA 235
BLAST of mRNA_D-herbacea_F_contig106.610.1 vs. uniprot
Match: A0A7S4V3N0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V3N0_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.340e-32 Identity = 66/152 (43.42%), Postives = 94/152 (61.84%), Query Frame = 1
Query: 289 EAVVDDIFDRADTDHDGVIADTEIQHLV-EGAGGTLLDDASEIEAGVRSVFRNLDQNADHSLSRSDLLSYWGRLGTLLTVDEVAQWVVHAVQLPQDVADIFRNNMVTGYDFPELAADQGVQLEQDLGVTRPAYRKRLVRSMKWKLWAMGEEP 741
EA F D D DG++ E+ + + E GGT D +E+E GV + LD+N D L +SD+ +YW L +LL DEVA WVVHAVQLP+ + +IFR NMVTGYDFPEL + G + +LG+ R ++RK++VR + ++ +G P
Sbjct: 134 EASAFSFFSSVDEDGDGMLEPPEVANFLRESIGGTAFDTQAEVETGVNKIMEKLDRNHDLGLDKSDVEAYWKHLESLLNADEVADWVVHAVQLPEYLGNIFRENMVTGYDFPELVENDGEAIRTELGIERSSFRKKIVRHIHARMLGIGSTP 285
BLAST of mRNA_D-herbacea_F_contig106.610.1 vs. uniprot
Match: D8LHW7_ECTSI (FYVE zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHW7_ECTSI) HSP 1 Score: 129 bits (325), Expect = 1.540e-30 Identity = 67/144 (46.53%), Postives = 97/144 (67.36%), Query Frame = 1
Query: 310 FDRADTDHDGVIADTEIQHLVEGAGGTLLDDASEIEAGVRSVFRNLDQNADHSLSRSDLLSYWGRLGTLLTVDEVAQWVVHAVQLPQDVADIFRNNMVTGYDFPELAADQGVQLEQDLGVTRPAYRKRLVRSMKWKLWAMGEEP 741
F+ D + DGV+A+ EI+ V GG+ LDD SEI GV +V LD ++D + +L S+ RLG +LTV+E A WV HAVQLP++VA+ FR+N ++ YDFPEL D G L DLG+ R +RKR+V++++ +L +G+EP
Sbjct: 145 FNSLDENSDGVLAENEIREFVGYVGGSSLDDNSEILGGVSTVMGRLDTDSDKGIGLKELSSWINRLGPMLTVEEAADWVSHAVQLPREVAEAFRSNSISAYDFPELVEDNGAGL-YDLGIKRK-FRKRIVKAIEVRLLGLGDEP 286
BLAST of mRNA_D-herbacea_F_contig106.610.1 vs. uniprot
Match: A0A7S2CAD4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CAD4_9STRA) HSP 1 Score: 121 bits (304), Expect = 3.260e-30 Identity = 62/154 (40.26%), Postives = 93/154 (60.39%), Query Frame = 1
Query: 292 AVVDDIFDRADTDHDGVIADTEIQHLVEG----AGGTLLDDASEIEAGVRSVFRNLDQNADHSLSRSDLLSYWGRLGTLLTVDEVAQWVVHAVQLPQDVADIFRNNMVTGYDFPELAADQGVQLEQDLGVTRPAYRKRLVRSMKWKLWAMGEEP 741
A D+ F DTD DG + + EI+ V G T ++D IE+ V + +D N D LS ++ +Y R+G +LTV VA+WV+H +QLP++V ++FR+N VTGYDF EL D G L D+G+TR +RK+++R+MK + +G P
Sbjct: 32 ASTDEFFTTMDTDADGQVEEFEIREAVAAFGSDGGATKVED---IESTVEDIMSRMDSNTDGLLSDEEIETYSKRIGAVLTVSAVAEWVIHGLQLPEEVGELFRSNSVTGYDFAELVEDDGAALGHDIGITRVVHRKKVLRAMKMLMTGVGNVP 182
BLAST of mRNA_D-herbacea_F_contig106.610.1 vs. uniprot
Match: A0A6H5L898_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L898_9PHAE) HSP 1 Score: 127 bits (320), Expect = 7.450e-30 Identity = 66/144 (45.83%), Postives = 97/144 (67.36%), Query Frame = 1
Query: 310 FDRADTDHDGVIADTEIQHLVEGAGGTLLDDASEIEAGVRSVFRNLDQNADHSLSRSDLLSYWGRLGTLLTVDEVAQWVVHAVQLPQDVADIFRNNMVTGYDFPELAADQGVQLEQDLGVTRPAYRKRLVRSMKWKLWAMGEEP 741
F+ D + DGV+A+ EI+ V GG+ LDD SEI GV +V LD +++ + +L S+ RLG +LTV+E A WV HAVQLP++VA+ FR+N ++ YDFPEL D G L DLG+ R +RKR+V++++ +L +G+EP
Sbjct: 165 FNSLDENSDGVLAEDEIREFVGYVGGSSLDDNSEILGGVSTVMGRLDTDSEKGIGLKELSSWINRLGPMLTVEEAADWVSHAVQLPREVAEAFRSNSISAYDFPELVEDNGAGL-YDLGIKRK-FRKRIVKAIEVRLLGLGDEP 306
BLAST of mRNA_D-herbacea_F_contig106.610.1 vs. uniprot
Match: A0A7S1B4T7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B4T7_9STRA) HSP 1 Score: 125 bits (313), Expect = 4.420e-29 Identity = 73/193 (37.82%), Postives = 112/193 (58.03%), Query Frame = 1
Query: 166 FLRPVILFLSLSLLALFGTRVGRGIRMFGPSAYAAGGAALPEAVVDDIFDRADTDHDGVIADTEIQHLV-EGAGGTLLDDASEIEAGVRSVFRNLDQNADHSLSRSDLLSYWGRLGTLLTVDEVAQWVVHAVQLPQDVADIFRNNMVTGYDFPELAADQGVQLEQDLGVTRPAYRKRLVRSMKWKLWAMGEEP 741
FL P L L + +LA+F V + ++ G + + F DTDHD I E+ + V + GGT D EI++ V ++F++LD N D +S D+ +W +L LLT DEVA+WV +AVQLP++VA+ FR+N VTG+DF EL + G LE+ LG+ + +RK+L+R +K ++ +G P
Sbjct: 18 FLDPTFLVL-IHILAVFIVIVAQDAQI--------GDSRRSDRTSTSFFSAVDTDHDDTIDLEELSNFVGKVIGGTQFDTPLEIQSEVNAMFKSLDLNHDKRISFKDVKEHWNKLECLLTADEVAEWVKYAVQLPENVANTFRDNAVTGFDFSELVVNNGEALERYLGIEKELFRKKLLRLIKARMLGVGTVP 201
BLAST of mRNA_D-herbacea_F_contig106.610.1 vs. uniprot
Match: A0A7S4R8Z4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R8Z4_9STRA) HSP 1 Score: 122 bits (305), Expect = 5.770e-28 Identity = 62/152 (40.79%), Postives = 95/152 (62.50%), Query Frame = 1
Query: 289 EAVVDDIFDRADTDHDGVIADTEIQH-LVEGAGGTLLDDASEIEAGVRSVFRNLDQNADHSLSRSDLLSYWGRLGTLLTVDEVAQWVVHAVQLPQDVADIFRNNMVTGYDFPELAADQGVQLEQDLGVTRPAYRKRLVRSMKWKLWAMGEEP 741
EA F D D DG++ E+ + L E GG+ D +E+EAGV V LD+N D L +SD+ ++W +L +LL DEVA WV++AVQLP+ + +IFR N VTGYDFPEL + G ++ +L + + ++R++L+ +K +L +G P
Sbjct: 110 EASAFSFFRSVDHDGDGMLEPQELGNFLSESIGGSAFDTQAEVEAGVNKVMEKLDRNHDSGLDKSDVDAFWVQLESLLNADEVADWVIYAVQLPEYLGNIFRENSVTGYDFPELIENGGEAMKTELRIEQSSFRRKLIWHIKARLLGVGSTP 261
BLAST of mRNA_D-herbacea_F_contig106.610.1 vs. uniprot
Match: A0A7S3V9U2_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V9U2_9STRA) HSP 1 Score: 122 bits (305), Expect = 6.900e-28 Identity = 65/146 (44.52%), Postives = 90/146 (61.64%), Query Frame = 1
Query: 310 FDRADTDHDGVIADTE-IQHLVEGAGGTLLDD-ASEIEAGVRSVFRNLDQNADHSLSRSDLLSYWGRLGTLLTVDEVAQWVVHAVQLPQDVADIFRNNMVTGYDFPELAADQGVQLEQDLGVTRPAYRKRLVRSMKWKLWAMGEEP 741
F+ D D DG I E I ++E GG+ DD +E++ V + +NLD N D L D+ SYW +L +LLTVDEVA WVVHAVQLP + DI R+ VTGYDFPEL D G L +L +T ++R +++R M+ ++ +G P
Sbjct: 221 FNFVDRDGDGKIRRPELIDFVMENIGGSDFDDEVNEVKPEVDRMMKNLDLNNDDGLDTGDVTSYWEKLESLLTVDEVADWVVHAVQLPSYIGDIVRDKHVTGYDFPELVEDNGKALVDELHITEKSFRTKIIRLMQARMLGIGSVP 366
BLAST of mRNA_D-herbacea_F_contig106.610.1 vs. uniprot
Match: A0A7S4R769_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R769_9STRA) HSP 1 Score: 120 bits (301), Expect = 9.720e-28 Identity = 62/152 (40.79%), Postives = 94/152 (61.84%), Query Frame = 1
Query: 289 EAVVDDIFDRADTDHDGVIADTEIQH-LVEGAGGTLLDDASEIEAGVRSVFRNLDQNADHSLSRSDLLSYWGRLGTLLTVDEVAQWVVHAVQLPQDVADIFRNNMVTGYDFPELAADQGVQLEQDLGVTRPAYRKRLVRSMKWKLWAMGEEP 741
EA F D D DG++ E+ + L E GG+ D +E+EAGV V LD+N D L +SD+ ++W +L +LL DEVA WV++AVQLP+ + +IFR N VTGYDFPEL + G ++ +L + + ++R++L+ +K L +G P
Sbjct: 110 EASAFSFFRSVDHDGDGMLEPQELGNFLSESIGGSAFDTQAEVEAGVNKVMEKLDRNHDSGLDKSDVDAFWVQLESLLNADEVADWVIYAVQLPEYLGNIFRENSVTGYDFPELIENGGEAMQTELRIEQSSFRRKLIWHIKACLLGVGSTP 261
BLAST of mRNA_D-herbacea_F_contig106.610.1 vs. uniprot
Match: A0A7S2KT34_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KT34_9STRA) HSP 1 Score: 120 bits (301), Expect = 2.170e-27 Identity = 59/141 (41.84%), Postives = 91/141 (64.54%), Query Frame = 1
Query: 322 DTDHDGVIADTEIQHLVEGA-GGTLLDDASEIEAGVRSVFRNLDQNADHSLSRSDLLSYWGRLGTLLTVDEVAQWVVHAVQLPQDVADIFRNNMVTGYDFPELAADQGVQLEQDLGVTRPAYRKRLVRSMKWKLWAMGEEP 741
DT+ DGV+ E+ + + + GG+ D +E+ V + LDQN D +L SD+ S+W +L ++LTVDEV WV++AVQLP+ VA+ F + VTGYDFPEL + G + +LG+ + ++RK+L+RS+ KL +G P
Sbjct: 127 DTNRDGVVKPNEMANFIRNSIGGSAFDTETEVNFEVERIMGELDQNQDENLDLSDVFSHWKQLESVLTVDEVKDWVLYAVQLPEKVANTFVEHSVTGYDFPELIENDGDAMRVELGIEKQSFRKKLLRSIHAKLLGIGSVP 267 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig106.610.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig106.610.1 >prot_D-herbacea_F_contig106.610.1 ID=prot_D-herbacea_F_contig106.610.1|Name=mRNA_D-herbacea_F_contig106.610.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=249bp TSAASDSTPGWAERAGLTCGVPAGASAATATTTAAGGDIFDSSSCVFKKDback to top mRNA from alignment at D-herbacea_F_contig106:190983..194779- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig106.610.1 ID=mRNA_D-herbacea_F_contig106.610.1|Name=mRNA_D-herbacea_F_contig106.610.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=3797bp|location=Sequence derived from alignment at D-herbacea_F_contig106:190983..194779- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig106:190983..194779- >mRNA_D-herbacea_F_contig106.610.1 ID=mRNA_D-herbacea_F_contig106.610.1|Name=mRNA_D-herbacea_F_contig106.610.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1494bp|location=Sequence derived from alignment at D-herbacea_F_contig106:190983..194779- (Desmarestia herbacea DmunF female)back to top |