prot_D-herbacea_F_contig1050.574.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-herbacea_F_contig1050.574.1
Unique Name	prot_D-herbacea_F_contig1050.574.1
Type	polypeptide
Organism	Desmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length	473

Homology

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BLAST of mRNA_D-herbacea_F_contig1050.574.1 vs. uniprot
Match: A0A2D9I4D8_9PROT (DNA repair protein RadA n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A2D9I4D8_9PROT)

HSP 1 Score: 894 bits (2310), Expect = 0.000e+0
Identity = 471/472 (99.79%), Postives = 472/472 (100.00%), Query Frame = 0

Query:    1 MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVEATPIGGGKRSGTGGSGKALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAPKGRAAKESKADDIAINAISDVSQLIRDLESSSDGPIRILDADARR 472
            MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVEATPIGGGKRSG+GGSGKALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAPKGRAAKESKADDIAINAISDVSQLIRDLESSSDGPIRILDADARR
Sbjct:    1 MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVEATPIGGGKRSGSGGSGKALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAPKGRAAKESKADDIAINAISDVSQLIRDLESSSDGPIRILDADARR 472

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BLAST of mRNA_D-herbacea_F_contig1050.574.1 vs. uniprot
Match: A0A7Y0DZ84_9PROT (DNA repair protein RadA n=1 Tax=Pacificispira spongiicola TaxID=2729598 RepID=A0A7Y0DZ84_9PROT)

HSP 1 Score: 783 bits (2021), Expect = 2.790e-283
Identity = 411/473 (86.89%), Postives = 433/473 (91.54%), Query Frame = 0

Query:    1 MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVEATPIGGGKRSGTGGSGKALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAPKGRAAKESKAD-DIAINAISDVSQLIRDLESSSDGPIRILDADARR 472
            MAK  KR+VCQ CGAV PRWAGKC+ACE WNSI EE VE+TPIGGGKRSG G SGKALDFV LKG+SE RPRL SGI ELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALS  A VAYISGEEAI+QIRMRA RL V++ +V LA+ATSVRDILASLDRPDG +VAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRG A+LLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLE+V NPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSA GTPRRAVVGWD NRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRI EPAADLAVAAAIVSSLTG+PVP  TVVFGEVGLSGE+RAVGRPDARLKEAGKLGF RA+APK R+AKE KA  D+ + A+ DV  LIR LE+ ++GPIRILDADARR
Sbjct:    1 MAKSSKRYVCQSCGAVFPRWAGKCEACEEWNSITEEVVESTPIGGGKRSGGGASGKALDFVSLKGESEARPRLTSGIGELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSRQAPVAYISGEEAIDQIRMRATRLGVTEAQVALASATSVRDILASLDRPDGPKVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGIAVLLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEQVLNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSAYGTPRRAVVGWDGNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIAEPAADLAVAAAIVSSLTGVPVPRGTVVFGEVGLSGEIRAVGRPDARLKEAGKLGFDRALAPKPRSAKEGKAQGDVTVTAVGDVGALIRHLEAEAEGPIRILDADARR 473

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BLAST of mRNA_D-herbacea_F_contig1050.574.1 vs. uniprot
Match: A0A8J7S5F1_9PROT (DNA repair protein RadA n=1 Tax=Marivibrio halodurans TaxID=2039722 RepID=A0A8J7S5F1_9PROT)

HSP 1 Score: 656 bits (1693), Expect = 2.570e-233
Identity = 358/475 (75.37%), Postives = 392/475 (82.53%), Query Frame = 0

Query:    1 MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVE-ATPIGGGKRSGTGGS---GKALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAPK-----GRAAKESKADD-IAINAISDVSQLIRDL--ESSSDGPI 463
            MA+   R+VCQ CGAV PRW G C++C  WNSI EE VE A PIGG  + GT  +   GKA++FV L G + + PRLKSGI E DRVLGGGLV+GSA LIGGDPGIGKSTLLLQ  AAL+  A VAYISGEEAI+Q+RMRA RL V    V+LAAATSV DILA++DR DG +V VIDSIQTMYVDLLDSAPGTVGQVRA+AQELIRVAKRRG A+LLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTE+GL+EVKNPSALFLADRQ+G+AGAAVFAGIEGSRPMLVEIQALVAPSA GTPRRAVVGWDSNRLAMLLAVLEAR GLDL GRDVYLNVAGGLRI EPAADLAVAAAI SSLTG  VP  TVVFGE+GLSGEVR VGR DARLKEA KLGF RAI P+     G   K  K D  + +  ++DV +L   L  + + DGP+
Sbjct:    1 MARSTTRYVCQGCGAVYPRWQGHCESCGEWNSIAEEAVESAPPIGGKAKGGTSATNRRGKAVEFVALDGANTRAPRLKSGIAEYDRVLGGGLVEGSAVLIGGDPGIGKSTLLLQVTAALARAARVAYISGEEAIDQVRMRADRLGVKQATVDLAAATSVPDILAAIDRNDGPKVVVIDSIQTMYVDLLDSAPGTVGQVRAAAQELIRVAKRRGIALLLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTEQGLQEVKNPSALFLADRQEGIAGAAVFAGIEGSRPMLVEIQALVAPSAYGTPRRAVVGWDSNRLAMLLAVLEARAGLDLGGRDVYLNVAGGLRISEPAADLAVAAAIASSLTGEAVPGETVVFGEIGLSGEVRTVGRADARLKEAAKLGFKRAIVPRRPGKDGPDRKGGKNDGALGVTEVADVGRLASLLAGDGTLDGPL 475

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BLAST of mRNA_D-herbacea_F_contig1050.574.1 vs. uniprot
Match: A0A3S2W2P9_9PROT (DNA repair protein RadA n=1 Tax=Hwanghaeella grinnelliae TaxID=2500179 RepID=A0A3S2W2P9_9PROT)

HSP 1 Score: 622 bits (1603), Expect = 9.600e-220
Identity = 336/471 (71.34%), Postives = 378/471 (80.25%), Query Frame = 0

Query:    1 MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVEATPIGGGKRSGTGGSGK----ALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAPKGRAAKESKADDIAINAISDVSQLIRDLESSSDGPIRILD 467
            MA+ +  FVCQ CG V  RWAG+CD C  WN++VEE V+A P+GG K SG G S K     + FV L G SE+ PRL + I E DRVLGGGLV+GSATLIGGDPGIGKSTLLLQA AALS HA  AY+SGEEA++QIRMRA+RL V++  VELAAA++VRDI A++D  DG  V V+DSIQTMYVD LDSAPGTVGQVRA AQELIRVAKRRGTA+L+VGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMT  GL EV NPS LFL+DRQ  VAGAAVFAGIEG+RPMLVEIQALVAPS LGTPRRAVVGWDS RLAM+LAVLE R G  LSG DVYLNVAGG+RI EPAADLAVAAA+VSSLTG P+P   VVFGE+GLSGEVRAV + + RLKEA KLGF  A+ PK R+  +S A  + +  ISD+  L      S+D   R+ +
Sbjct:    1 MARSKSSFVCQSCGTVHVRWAGQCDGCGEWNTVVEEIVDAPPVGG-KASGKGESAKNRAGRIAFVPLTGVSERAPRLATDIGEFDRVLGGGLVEGSATLIGGDPGIGKSTLLLQAVAALSKHAKCAYVSGEEAVDQIRMRAERLGVAEAPVELAAASNVRDIAAAMDAADGPAVIVVDSIQTMYVDSLDSAPGTVGQVRACAQELIRVAKRRGTALLIVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTGEGLMEVGNPSELFLSDRQRDVAGAAVFAGIEGTRPMLVEIQALVAPSPLGTPRRAVVGWDSGRLAMVLAVLEGRAGYRLSGNDVYLNVAGGMRISEPAADLAVAAALVSSLTGEPIPADMVVFGEIGLSGEVRAVSQSEGRLKEAAKLGFAAALTPKRRSRTDSGA--LRVMEISDLHGLETFFGRSADSQPRVAE 468

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BLAST of mRNA_D-herbacea_F_contig1050.574.1 vs. uniprot
Match: A0A8G2BH91_9PROT (DNA repair protein RadA n=1 Tax=Thalassobaculum litoreum DSM 18839 TaxID=1123362 RepID=A0A8G2BH91_9PROT)

HSP 1 Score: 604 bits (1558), Expect = 6.170e-213
Identity = 320/458 (69.87%), Postives = 369/458 (80.57%), Query Frame = 0

Query:    1 MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVEATPIGGGKRSGTGGSGKALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAP----KGRAAKESKADDIAINAISDVSQLIRD 454
            MAK   R+VCQECG+VT +WAGKCDAC AWN++VEE VEA P G        G G+ ++FV L G S++ PR  +GI E DRVLGGGLV GSATLIGGDPGIGKST+LLQ  A LS     AY+SGEEA++Q+RMRAQRL V+   V LAAATSVRDI++SL+  D   V VIDSIQTMYVD LDSAPGTV QVRASAQELIRVAK+RG A+LLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGH FRILRGVKNRFGPTDEIGVF+MTE GL EV NPSALFL+DRQD ++GA VFAG+EG+RP+LVEIQAL+APS  GTPRRAVVGWD NRLAM+ AVLEAR G+ L+G DV+LNVAGGLR+ EPAADLAVAAA++SSLTG+PVP  +VVFGE+GLS EVRAV + +ARLKEA KLGF +A+ P    KG  A     D + I+ + D+  L+ D
Sbjct:    1 MAKSTSRYVCQECGSVTAKWAGKCDACGAWNTLVEEVVEAAPKGLKP-----GGGRRINFVELAGQSKETPRRITGIGEFDRVLGGGLVPGSATLIGGDPGIGKSTVLLQVVAGLSGTCRCAYVSGEEAVDQVRMRAQRLGVAGASVGLAAATSVRDIVSSLEAADSPDVVVIDSIQTMYVDALDSAPGTVAQVRASAQELIRVAKKRGIALLLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHQFRILRGVKNRFGPTDEIGVFEMTEGGLMEVTNPSALFLSDRQDDISGACVFAGVEGTRPVLVEIQALIAPSPYGTPRRAVVGWDGNRLAMVTAVLEARCGVSLAGNDVFLNVAGGLRVSEPAADLAVAAALLSSLTGVPVPKGSVVFGEIGLSAEVRAVTQAEARLKEAAKLGFEKALLPASRRKGGKALSGGLDLVEISRLHDLVDLLHD 453

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BLAST of mRNA_D-herbacea_F_contig1050.574.1 vs. uniprot
Match: UPI0012BC3919 (DNA repair protein RadA n=1 Tax=Curvivirga aplysinae TaxID=2529852 RepID=UPI0012BC3919)

HSP 1 Score: 602 bits (1551), Expect = 5.170e-212
Identity = 313/448 (69.87%), Postives = 363/448 (81.03%), Query Frame = 0

Query:    1 MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVEATPIGGGKRSGTGGSGKALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAPKGRAAKESKADDIAINAISDV 448
            MAK +  +VCQ CG V  RWAG+CD C  WN+I EE  E     G K S +   G+ ++FV LKG  E++PRL++GI E DRV GGGLV+GSATLIGGDPGIGKSTLLLQ  AAL+     AYISGEEAI+Q+R+RA RL VSD  V+LA+AT++RDI A+L+ P+G +VAVIDSIQTM++D L++APGTVGQVRA AQELIRVAK+   +IL+VGHVTKEGAIAGPRVLEHMVDTVLYFEGERGH FRILRGVKNRFG TDEIGVFDMTE+GL EV NPS LFLADRQDG+AGA VFAG+EGSRPMLVEIQALVAPS L TPRRAVVGWD+NR+AM+LAVLEAR G  LSG D+YLNVAGGLRI EPAADLAVA A+VSSLT IPVP   VVFGE+GLSGEVR+V + D RLKEA KLGF  A++PK R   ++K   I +  + D+
Sbjct:    1 MAKARISYVCQSCGTVYTRWAGRCDNCGEWNTISEEAAEVAAPLGSKASKSKSQGRKIEFVSLKGAEEKKPRLRTGIAEFDRVTGGGLVNGSATLIGGDPGIGKSTLLLQVMAALAKQVPCAYISGEEAIDQVRLRADRLGVSDAPVQLASATNLRDITATLEDPNGPKVAVIDSIQTMFIDALETAPGTVGQVRACAQELIRVAKKHDVSILIVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHQFRILRGVKNRFGATDEIGVFDMTEQGLMEVPNPSELFLADRQDGIAGAVVFAGMEGSRPMLVEIQALVAPSPLATPRRAVVGWDNNRMAMVLAVLEARAGFSLSGNDIYLNVAGGLRIQEPAADLAVATALVSSLTQIPVPSDMVVFGEIGLSGEVRSVAQMDTRLKEAEKLGFASALSPKRRKQNKAKKGKINVTELPDL 448

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BLAST of mRNA_D-herbacea_F_contig1050.574.1 vs. uniprot
Match: A0A3D9HVP6_9PROT (DNA repair protein RadA n=1 Tax=Aestuariispira insulae TaxID=1461337 RepID=A0A3D9HVP6_9PROT)

HSP 1 Score: 602 bits (1552), Expect = 6.470e-212
Identity = 313/449 (69.71%), Postives = 369/449 (82.18%), Query Frame = 0

Query:    1 MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVEA-TPIGGGKRSGTGGSGKALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAPKGRAAKESKADDIAINAISDV 448
            MAK + R+VCQ CG+V  RWAG+CDAC  WNSI EE VEA  PIGG   +     G+AL+FV L+G+S Q PRL +GI E DRV GGGLVDGSA LIGGDPGIGKSTLLLQ  AA++     AY+SGEEAI+Q+RMRA RL V+D+ V+LA+AT++R+I+A+++  +  RV V+DSIQTM++D L+SAPGTVGQVRA AQELIRVAK++G  +L+VGHVTKEG IAGPR+LEHMVDTVLYFEGERGH FRILRGVKNRFG TDEIGVFDMTE+GL EV NPS LFLADRQDGVAGAAVFAG+EG+RP+LVEIQALVAPS L TPRRAV+GWDSNRLAM+LAVLEAR G  LSG DVYLNVAGGLRI EPAADLA+AAA+VSSLT  PVP   V+FGE+GLSGEVR+V + DARLKEA KLGF +A+ P+ R+  + K   I +  + D+
Sbjct:    1 MAKAKTRYVCQSCGSVYTRWAGRCDACGEWNSISEEIVEAEAPIGGKASTQKSNRGRALEFVSLQGESAQAPRLVTGITEFDRVTGGGLVDGSAILIGGDPGIGKSTLLLQVTAAVARKVPCAYVSGEEAIDQVRMRAARLGVADSPVQLASATNLRNIIATMESENKPRVVVVDSIQTMFIDALESAPGTVGQVRACAQELIRVAKKQGVTVLIVGHVTKEGNIAGPRILEHMVDTVLYFEGERGHQFRILRGVKNRFGATDEIGVFDMTEQGLMEVPNPSELFLADRQDGVAGAAVFAGMEGTRPVLVEIQALVAPSPLATPRRAVIGWDSNRLAMVLAVLEARAGFTLSGNDVYLNVAGGLRINEPAADLAIAAALVSSLTQTPVPSDMVIFGEIGLSGEVRSVSQMDARLKEAEKLGFAQAMMPRRRSKTKLKKSGIRLIEMPDL 449

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BLAST of mRNA_D-herbacea_F_contig1050.574.1 vs. uniprot
Match: W6KAX5_MAGSQ (DNA repair protein RadA n=1 Tax=Magnetospira sp. (strain QH-2) TaxID=1288970 RepID=W6KAX5_MAGSQ)

HSP 1 Score: 598 bits (1541), Expect = 1.480e-210
Identity = 316/455 (69.45%), Postives = 369/455 (81.10%), Query Frame = 0

Query:    1 MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETV-EATPIGGGKRSGTGGSGKALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAPKGRAAKESK-ADDIAINAISDVSQLIR 453
            M K   R+VCQ+CGA  P+WAGKC+AC AWNS+ EE   E+ P G GK     G G+ ++FV L G + Q PR  +GI E DRV GGGLV GSA L+GGDPGIGKSTLLLQ  AALSA A  AYISGEE+++Q+R+RA R+ ++D KV+LAAATSVRDI+A+L+ PD  ++A+IDSIQTMY+D LDSAPGTVGQVRAS+ ELIR+AKRRG  I+LVGHVTKEGAIAGPRVLEHMVDTVLYFEG+RGH FRI+R VKNRFG TDEIGVF+MTE+GL EV NPSALFLAD QD V+GA VFAG+EGSRP+LVE+Q+L+APS + TPRRAVVGWDS RLAMLLAV++AR  L LS ++VYLNVAGGLRI EPAADLAVAAA+ SS+ G PVP  TVVFGEVGLSGEVRAVGR DARLKEA KLGFTRAI PK R     K  + + +N IS +  L+R
Sbjct:    1 MPKSTTRYVCQQCGASYPKWAGKCEACGAWNSLAEEQAPESAPKGLGK-----GKGRKIEFVDLDGPAGQTPRAVTGIAEFDRVCGGGLVPGSALLVGGDPGIGKSTLLLQVTAALSAQAPCAYISGEESVDQVRLRAARMGLADAKVQLAAATSVRDIVATLEGPDAPKLAIIDSIQTMYLDNLDSAPGTVGQVRASSHELIRLAKRRGITIVLVGHVTKEGAIAGPRVLEHMVDTVLYFEGDRGHHFRIMRAVKNRFGATDEIGVFEMTEKGLAEVPNPSALFLADHQDDVSGACVFAGLEGSRPVLVELQSLIAPSTMSTPRRAVVGWDSGRLAMLLAVMDARCDLSLSDQEVYLNVAGGLRITEPAADLAVAAALASSVGGKPVPKGTVVFGEVGLSGEVRAVGRADARLKEAAKLGFTRAIIPKRRQKDADKNPEGLTVNEISHLDDLLR 450

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BLAST of mRNA_D-herbacea_F_contig1050.574.1 vs. uniprot
Match: A8U1S8_9PROT (DNA repair protein RadA n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A8U1S8_9PROT)

HSP 1 Score: 596 bits (1536), Expect = 1.410e-209
Identity = 312/458 (68.12%), Postives = 369/458 (80.57%), Query Frame = 0

Query:    1 MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVEATPIGGGKRSGTGGSGKALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAP----KGRAAKESKADDIAINAISDVSQLIRD 454
            MAK    FVCQ+CG+V P+WAGKC+AC AWN++VEE VE+       +S   G G+ L FV L G++   PR  +GI E DRVLGGGLV GSATLIGGDPGIGKST+LLQ  A L+  +  AY+SGEE+++Q+RMRA+RL ++   V LAAAT+VRDI+ASLD  D   + VIDSIQTMYVD LDSAPGTV QVRASAQELIR+AK+RG A+LLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGH FRILRGVKNRFGPTDEIGVF+MTERGL EV NPSALFL+DRQD V+GA VFAG+EG+RP+LVEIQALVAPS  GTPRRAVVGWDSNRLAM+ AVLEAR G+ L+G DV+LNVAGGLR+ EPAADLAVAAA++SSLTG+PVP  +VVFGE+GL+ EVRAV   + RLKEA KLGF++A+ P    KG        + +AI+ + D+ +L+ D
Sbjct:    1 MAKSTSTFVCQDCGSVHPKWAGKCEACGAWNTLVEEIVESAA----PKSMRPGGGRRLAFVELDGETTDAPRRVTGIGEFDRVLGGGLVPGSATLIGGDPGIGKSTVLLQVVAGLAGQSKCAYVSGEESVDQVRMRARRLGIASASVGLAAATNVRDIVASLDTADRPDIIVIDSIQTMYVDALDSAPGTVTQVRASAQELIRIAKKRGVAVLLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHQFRILRGVKNRFGPTDEIGVFEMTERGLVEVGNPSALFLSDRQDDVSGACVFAGMEGTRPVLVEIQALVAPSPFGTPRRAVVGWDSNRLAMVTAVLEARCGVSLAGNDVFLNVAGGLRVSEPAADLAVAAALISSLTGVPVPKASVVFGEIGLAAEVRAVTHAEPRLKEAAKLGFSKALLPAVRRKGGGPSAGGLELVAISRLHDLVELLHD 454

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BLAST of mRNA_D-herbacea_F_contig1050.574.1 vs. uniprot
Match: A0A3N1M668_9PROT (DNA repair protein RadA n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1M668_9PROT)

HSP 1 Score: 594 bits (1532), Expect = 5.700e-209
Identity = 311/452 (68.81%), Postives = 368/452 (81.42%), Query Frame = 0

Query:    1 MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVEATPIGGGKRSGTG-GSGKALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAPKGRAAKESKADDIAINAISDVSQL 451
            MA+P  RFVCQ+CGAV P+WAG+C+ C AWNS+VEET      G G   G G G G+ ++ VGL+G  +  PR  +GI E DRV GGGLV GSA L+GGDPGIGKSTLLLQ AA L+   +V YISGEEAIEQ+RMRA+RL+V+ + V LAAATSVRDI+ASLD+     + VIDSIQTMY+D LDSAPGTV QVR+SAQELIR+AKRRG A++LVGHVTKEG IAGPRVLEHMVDTVLYFEGERGH FRILR VKNRFGPTDEIGVF+MT+RGL+EV NPSALFLADRQ  ++GAAVFAG+EG+RPMLVEIQALVAPSA GTPRRAVVGWD  RL+M+LAVLEARGG+ + G D+YLNVAGGLRI EPAADLAVAAA++S+ TG  +P  TVVFGE+GLSGEVRAV + + RLKEAGKLGF  A+ P  R  + +++ ++ +  I  V++L
Sbjct:    1 MARPAARFVCQQCGAVHPKWAGRCEDCGAWNSLVEETG-----GDGPPKGLGTGKGRRIELVGLEGSEQDAPRRVTGIGEFDRVAGGGLVPGSALLVGGDPGIGKSTLLLQVAARLAGSGTVLYISGEEAIEQVRMRARRLDVAGSPVSLAAATSVRDIVASLDQGPAPALVVIDSIQTMYLDSLDSAPGTVAQVRSSAQELIRLAKRRGFALVLVGHVTKEGTIAGPRVLEHMVDTVLYFEGERGHQFRILRAVKNRFGPTDEIGVFEMTDRGLDEVLNPSALFLADRQGDISGAAVFAGMEGTRPMLVEIQALVAPSAPGTPRRAVVGWDGGRLSMILAVLEARGGVAIGGNDIYLNVAGGLRIQEPAADLAVAAALISASTGQALPAATVVFGEIGLSGEVRAVSQTEQRLKEAGKLGFEHALMPPQRGRRLARSAEVTLQEIGTVAEL 447

The following BLAST results are available for this feature:

BLAST of mRNA_D-herbacea_F_contig1050.574.1 vs. uniprot

BLAST of mRNA_D-herbacea_F_contig1050.574.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2D9I4D8_9PROT	0.000e+0	99.79	DNA repair protein RadA n=2 Tax=Rhodospirillales T...	[more]
A0A7Y0DZ84_9PROT	2.790e-283	86.89	DNA repair protein RadA n=1 Tax=Pacificispira spon...	[more]
A0A8J7S5F1_9PROT	2.570e-233	75.37	DNA repair protein RadA n=1 Tax=Marivibrio halodur...	[more]
A0A3S2W2P9_9PROT	9.600e-220	71.34	DNA repair protein RadA n=1 Tax=Hwanghaeella grinn...	[more]
A0A8G2BH91_9PROT	6.170e-213	69.87	DNA repair protein RadA n=1 Tax=Thalassobaculum li...	[more]
UPI0012BC3919	5.170e-212	69.87	DNA repair protein RadA n=1 Tax=Curvivirga aplysin...	[more]
A0A3D9HVP6_9PROT	6.470e-212	69.71	DNA repair protein RadA n=1 Tax=Aestuariispira ins...	[more]
W6KAX5_MAGSQ	1.480e-210	69.45	DNA repair protein RadA n=1 Tax=Magnetospira sp. (...	[more]
A8U1S8_9PROT	1.410e-209	68.12	DNA repair protein RadA n=2 Tax=Alphaproteobacteri...	[more]
A0A3N1M668_9PROT	5.700e-209	68.81	DNA repair protein RadA n=1 Tax=Stella humosa TaxI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01874	DNAREPAIRADA	coord: 123..140 score: 60.4 coord: 322..345 score: 57.91 coord: 82..110 score: 81.17 coord: 248..274 score: 64.29 coord: 10..34 score: 51.08 coord: 174..198 score: 54.67 coord: 213..241 score: 76.57
None	No IPR available	GENE3D	3.40.50.300		coord: 65..283 e-value: 7.2E-41 score: 142.2
None	No IPR available	PFAM	PF13481	AAA_25	coord: 74..222 e-value: 2.7E-11 score: 43.4
None	No IPR available	PANTHER	PTHR32472	FAMILY NOT NAMED	coord: 1..452
None	No IPR available	PANTHER	PTHR32472:SF10	DNA REPAIR PROTEIN RADA-LIKE PROTEIN	coord: 1..452
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 90..244 e-value: 5.6E-9 score: 45.8
IPR004504	DNA repair protein RadA	TIGRFAM	TIGR00416	TIGR00416	coord: 1..450 e-value: 1.6E-172 score: 572.3
IPR004504	DNA repair protein RadA	HAMAP	MF_01498	RadA_bact	coord: 21..456 score: 43.264
IPR008269	Peptidase S16, Lon proteolytic domain	PFAM	PF05362	Lon_C	coord: 366..430 e-value: 2.9E-5 score: 23.7
IPR041166	LapB, rubredoxin metal binding domain	PFAM	PF18073	Rubredoxin_2	coord: 8..35 e-value: 3.1E-12 score: 46.0
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 329..456 e-value: 9.2E-18 score: 66.6
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 69..218 score: 33.841
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 255..453
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 68..289

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-herbacea_F_contig1050	contig	D-herbacea_F_contig1050:18448..19866 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female	2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90	2022-09-16
OGS1.0 of Desmarestia herbacea DmunF female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-herbacea_F_contig1050.574.1	mRNA_D-herbacea_F_contig1050.574.1	Desmarestia herbacea DmunF female	mRNA	D-herbacea_F_contig1050 18448..19866 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-herbacea_F_contig1050.574.1 ID=prot_D-herbacea_F_contig1050.574.1|Name=mRNA_D-herbacea_F_contig1050.574.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=473bp
MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVEATPIGGGKRSG
TGGSGKALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDP
GIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELA
AATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQE
LIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRI
LRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAG
IEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDL
SGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLS
GEVRAVGRPDARLKEAGKLGFTRAIAPKGRAAKESKADDIAINAISDVSQ
LIRDLESSSDGPIRILDADARR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR020568	Ribosomal_S5_D2-typ_fold
IPR020588	RecA_ATP-bd
IPR014721	Ribosomal_S5_D2-typ_fold_subgr
IPR041166	Rubredoxin_2
IPR008269	Lon_proteolytic
IPR004504	DNA_repair_RadA
IPR003593	AAA+_ATPase