mRNA_D-herbacea_F_contig1050.574.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig1050.574.1 vs. uniprot
Match: A0A2D9I4D8_9PROT (DNA repair protein RadA n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A2D9I4D8_9PROT) HSP 1 Score: 894 bits (2310), Expect = 0.000e+0 Identity = 471/472 (99.79%), Postives = 472/472 (100.00%), Query Frame = 1
Query: 1 MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVEATPIGGGKRSGTGGSGKALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAPKGRAAKESKADDIAINAISDVSQLIRDLESSSDGPIRILDADARR 1416
MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVEATPIGGGKRSG+GGSGKALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAPKGRAAKESKADDIAINAISDVSQLIRDLESSSDGPIRILDADARR
Sbjct: 1 MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVEATPIGGGKRSGSGGSGKALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAPKGRAAKESKADDIAINAISDVSQLIRDLESSSDGPIRILDADARR 472
BLAST of mRNA_D-herbacea_F_contig1050.574.1 vs. uniprot
Match: A0A7Y0DZ84_9PROT (DNA repair protein RadA n=1 Tax=Pacificispira spongiicola TaxID=2729598 RepID=A0A7Y0DZ84_9PROT) HSP 1 Score: 783 bits (2021), Expect = 2.790e-283 Identity = 411/473 (86.89%), Postives = 433/473 (91.54%), Query Frame = 1
Query: 1 MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVEATPIGGGKRSGTGGSGKALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAPKGRAAKESKAD-DIAINAISDVSQLIRDLESSSDGPIRILDADARR 1416
MAK KR+VCQ CGAV PRWAGKC+ACE WNSI EE VE+TPIGGGKRSG G SGKALDFV LKG+SE RPRL SGI ELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALS A VAYISGEEAI+QIRMRA RL V++ +V LA+ATSVRDILASLDRPDG +VAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRG A+LLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLE+V NPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSA GTPRRAVVGWD NRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRI EPAADLAVAAAIVSSLTG+PVP TVVFGEVGLSGE+RAVGRPDARLKEAGKLGF RA+APK R+AKE KA D+ + A+ DV LIR LE+ ++GPIRILDADARR
Sbjct: 1 MAKSSKRYVCQSCGAVFPRWAGKCEACEEWNSITEEVVESTPIGGGKRSGGGASGKALDFVSLKGESEARPRLTSGIGELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSRQAPVAYISGEEAIDQIRMRATRLGVTEAQVALASATSVRDILASLDRPDGPKVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGIAVLLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEQVLNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSAYGTPRRAVVGWDGNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIAEPAADLAVAAAIVSSLTGVPVPRGTVVFGEVGLSGEIRAVGRPDARLKEAGKLGFDRALAPKPRSAKEGKAQGDVTVTAVGDVGALIRHLEAEAEGPIRILDADARR 473
BLAST of mRNA_D-herbacea_F_contig1050.574.1 vs. uniprot
Match: A0A8J7S5F1_9PROT (DNA repair protein RadA n=1 Tax=Marivibrio halodurans TaxID=2039722 RepID=A0A8J7S5F1_9PROT) HSP 1 Score: 656 bits (1693), Expect = 2.570e-233 Identity = 358/475 (75.37%), Postives = 392/475 (82.53%), Query Frame = 1
Query: 1 MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVE-ATPIGGGKRSGTGGS---GKALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAPK-----GRAAKESKADD-IAINAISDVSQLIRDL--ESSSDGPI 1389
MA+ R+VCQ CGAV PRW G C++C WNSI EE VE A PIGG + GT + GKA++FV L G + + PRLKSGI E DRVLGGGLV+GSA LIGGDPGIGKSTLLLQ AAL+ A VAYISGEEAI+Q+RMRA RL V V+LAAATSV DILA++DR DG +V VIDSIQTMYVDLLDSAPGTVGQVRA+AQELIRVAKRRG A+LLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTE+GL+EVKNPSALFLADRQ+G+AGAAVFAGIEGSRPMLVEIQALVAPSA GTPRRAVVGWDSNRLAMLLAVLEAR GLDL GRDVYLNVAGGLRI EPAADLAVAAAI SSLTG VP TVVFGE+GLSGEVR VGR DARLKEA KLGF RAI P+ G K K D + + ++DV +L L + + DGP+
Sbjct: 1 MARSTTRYVCQGCGAVYPRWQGHCESCGEWNSIAEEAVESAPPIGGKAKGGTSATNRRGKAVEFVALDGANTRAPRLKSGIAEYDRVLGGGLVEGSAVLIGGDPGIGKSTLLLQVTAALARAARVAYISGEEAIDQVRMRADRLGVKQATVDLAAATSVPDILAAIDRNDGPKVVVIDSIQTMYVDLLDSAPGTVGQVRAAAQELIRVAKRRGIALLLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTEQGLQEVKNPSALFLADRQEGIAGAAVFAGIEGSRPMLVEIQALVAPSAYGTPRRAVVGWDSNRLAMLLAVLEARAGLDLGGRDVYLNVAGGLRISEPAADLAVAAAIASSLTGEAVPGETVVFGEIGLSGEVRTVGRADARLKEAAKLGFKRAIVPRRPGKDGPDRKGGKNDGALGVTEVADVGRLASLLAGDGTLDGPL 475
BLAST of mRNA_D-herbacea_F_contig1050.574.1 vs. uniprot
Match: A0A3S2W2P9_9PROT (DNA repair protein RadA n=1 Tax=Hwanghaeella grinnelliae TaxID=2500179 RepID=A0A3S2W2P9_9PROT) HSP 1 Score: 622 bits (1603), Expect = 9.600e-220 Identity = 336/471 (71.34%), Postives = 378/471 (80.25%), Query Frame = 1
Query: 1 MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVEATPIGGGKRSGTGGSGK----ALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAPKGRAAKESKADDIAINAISDVSQLIRDLESSSDGPIRILD 1401
MA+ + FVCQ CG V RWAG+CD C WN++VEE V+A P+GG K SG G S K + FV L G SE+ PRL + I E DRVLGGGLV+GSATLIGGDPGIGKSTLLLQA AALS HA AY+SGEEA++QIRMRA+RL V++ VELAAA++VRDI A++D DG V V+DSIQTMYVD LDSAPGTVGQVRA AQELIRVAKRRGTA+L+VGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMT GL EV NPS LFL+DRQ VAGAAVFAGIEG+RPMLVEIQALVAPS LGTPRRAVVGWDS RLAM+LAVLE R G LSG DVYLNVAGG+RI EPAADLAVAAA+VSSLTG P+P VVFGE+GLSGEVRAV + + RLKEA KLGF A+ PK R+ +S A + + ISD+ L S+D R+ +
Sbjct: 1 MARSKSSFVCQSCGTVHVRWAGQCDGCGEWNTVVEEIVDAPPVGG-KASGKGESAKNRAGRIAFVPLTGVSERAPRLATDIGEFDRVLGGGLVEGSATLIGGDPGIGKSTLLLQAVAALSKHAKCAYVSGEEAVDQIRMRAERLGVAEAPVELAAASNVRDIAAAMDAADGPAVIVVDSIQTMYVDSLDSAPGTVGQVRACAQELIRVAKRRGTALLIVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTGEGLMEVGNPSELFLSDRQRDVAGAAVFAGIEGTRPMLVEIQALVAPSPLGTPRRAVVGWDSGRLAMVLAVLEGRAGYRLSGNDVYLNVAGGMRISEPAADLAVAAALVSSLTGEPIPADMVVFGEIGLSGEVRAVSQSEGRLKEAAKLGFAAALTPKRRSRTDSGA--LRVMEISDLHGLETFFGRSADSQPRVAE 468
BLAST of mRNA_D-herbacea_F_contig1050.574.1 vs. uniprot
Match: A0A8G2BH91_9PROT (DNA repair protein RadA n=1 Tax=Thalassobaculum litoreum DSM 18839 TaxID=1123362 RepID=A0A8G2BH91_9PROT) HSP 1 Score: 604 bits (1558), Expect = 6.170e-213 Identity = 320/458 (69.87%), Postives = 369/458 (80.57%), Query Frame = 1
Query: 1 MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVEATPIGGGKRSGTGGSGKALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAP----KGRAAKESKADDIAINAISDVSQLIRD 1362
MAK R+VCQECG+VT +WAGKCDAC AWN++VEE VEA P G G G+ ++FV L G S++ PR +GI E DRVLGGGLV GSATLIGGDPGIGKST+LLQ A LS AY+SGEEA++Q+RMRAQRL V+ V LAAATSVRDI++SL+ D V VIDSIQTMYVD LDSAPGTV QVRASAQELIRVAK+RG A+LLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGH FRILRGVKNRFGPTDEIGVF+MTE GL EV NPSALFL+DRQD ++GA VFAG+EG+RP+LVEIQAL+APS GTPRRAVVGWD NRLAM+ AVLEAR G+ L+G DV+LNVAGGLR+ EPAADLAVAAA++SSLTG+PVP +VVFGE+GLS EVRAV + +ARLKEA KLGF +A+ P KG A D + I+ + D+ L+ D
Sbjct: 1 MAKSTSRYVCQECGSVTAKWAGKCDACGAWNTLVEEVVEAAPKGLKP-----GGGRRINFVELAGQSKETPRRITGIGEFDRVLGGGLVPGSATLIGGDPGIGKSTVLLQVVAGLSGTCRCAYVSGEEAVDQVRMRAQRLGVAGASVGLAAATSVRDIVSSLEAADSPDVVVIDSIQTMYVDALDSAPGTVAQVRASAQELIRVAKKRGIALLLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHQFRILRGVKNRFGPTDEIGVFEMTEGGLMEVTNPSALFLSDRQDDISGACVFAGVEGTRPVLVEIQALIAPSPYGTPRRAVVGWDGNRLAMVTAVLEARCGVSLAGNDVFLNVAGGLRVSEPAADLAVAAALLSSLTGVPVPKGSVVFGEIGLSAEVRAVTQAEARLKEAAKLGFEKALLPASRRKGGKALSGGLDLVEISRLHDLVDLLHD 453
BLAST of mRNA_D-herbacea_F_contig1050.574.1 vs. uniprot
Match: UPI0012BC3919 (DNA repair protein RadA n=1 Tax=Curvivirga aplysinae TaxID=2529852 RepID=UPI0012BC3919) HSP 1 Score: 602 bits (1551), Expect = 5.170e-212 Identity = 313/448 (69.87%), Postives = 363/448 (81.03%), Query Frame = 1
Query: 1 MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVEATPIGGGKRSGTGGSGKALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAPKGRAAKESKADDIAINAISDV 1344
MAK + +VCQ CG V RWAG+CD C WN+I EE E G K S + G+ ++FV LKG E++PRL++GI E DRV GGGLV+GSATLIGGDPGIGKSTLLLQ AAL+ AYISGEEAI+Q+R+RA RL VSD V+LA+AT++RDI A+L+ P+G +VAVIDSIQTM++D L++APGTVGQVRA AQELIRVAK+ +IL+VGHVTKEGAIAGPRVLEHMVDTVLYFEGERGH FRILRGVKNRFG TDEIGVFDMTE+GL EV NPS LFLADRQDG+AGA VFAG+EGSRPMLVEIQALVAPS L TPRRAVVGWD+NR+AM+LAVLEAR G LSG D+YLNVAGGLRI EPAADLAVA A+VSSLT IPVP VVFGE+GLSGEVR+V + D RLKEA KLGF A++PK R ++K I + + D+
Sbjct: 1 MAKARISYVCQSCGTVYTRWAGRCDNCGEWNTISEEAAEVAAPLGSKASKSKSQGRKIEFVSLKGAEEKKPRLRTGIAEFDRVTGGGLVNGSATLIGGDPGIGKSTLLLQVMAALAKQVPCAYISGEEAIDQVRLRADRLGVSDAPVQLASATNLRDITATLEDPNGPKVAVIDSIQTMFIDALETAPGTVGQVRACAQELIRVAKKHDVSILIVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHQFRILRGVKNRFGATDEIGVFDMTEQGLMEVPNPSELFLADRQDGIAGAVVFAGMEGSRPMLVEIQALVAPSPLATPRRAVVGWDNNRMAMVLAVLEARAGFSLSGNDIYLNVAGGLRIQEPAADLAVATALVSSLTQIPVPSDMVVFGEIGLSGEVRSVAQMDTRLKEAEKLGFASALSPKRRKQNKAKKGKINVTELPDL 448
BLAST of mRNA_D-herbacea_F_contig1050.574.1 vs. uniprot
Match: A0A3D9HVP6_9PROT (DNA repair protein RadA n=1 Tax=Aestuariispira insulae TaxID=1461337 RepID=A0A3D9HVP6_9PROT) HSP 1 Score: 602 bits (1552), Expect = 6.470e-212 Identity = 313/449 (69.71%), Postives = 369/449 (82.18%), Query Frame = 1
Query: 1 MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVEA-TPIGGGKRSGTGGSGKALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAPKGRAAKESKADDIAINAISDV 1344
MAK + R+VCQ CG+V RWAG+CDAC WNSI EE VEA PIGG + G+AL+FV L+G+S Q PRL +GI E DRV GGGLVDGSA LIGGDPGIGKSTLLLQ AA++ AY+SGEEAI+Q+RMRA RL V+D+ V+LA+AT++R+I+A+++ + RV V+DSIQTM++D L+SAPGTVGQVRA AQELIRVAK++G +L+VGHVTKEG IAGPR+LEHMVDTVLYFEGERGH FRILRGVKNRFG TDEIGVFDMTE+GL EV NPS LFLADRQDGVAGAAVFAG+EG+RP+LVEIQALVAPS L TPRRAV+GWDSNRLAM+LAVLEAR G LSG DVYLNVAGGLRI EPAADLA+AAA+VSSLT PVP V+FGE+GLSGEVR+V + DARLKEA KLGF +A+ P+ R+ + K I + + D+
Sbjct: 1 MAKAKTRYVCQSCGSVYTRWAGRCDACGEWNSISEEIVEAEAPIGGKASTQKSNRGRALEFVSLQGESAQAPRLVTGITEFDRVTGGGLVDGSAILIGGDPGIGKSTLLLQVTAAVARKVPCAYVSGEEAIDQVRMRAARLGVADSPVQLASATNLRNIIATMESENKPRVVVVDSIQTMFIDALESAPGTVGQVRACAQELIRVAKKQGVTVLIVGHVTKEGNIAGPRILEHMVDTVLYFEGERGHQFRILRGVKNRFGATDEIGVFDMTEQGLMEVPNPSELFLADRQDGVAGAAVFAGMEGTRPVLVEIQALVAPSPLATPRRAVIGWDSNRLAMVLAVLEARAGFTLSGNDVYLNVAGGLRINEPAADLAIAAALVSSLTQTPVPSDMVIFGEIGLSGEVRSVSQMDARLKEAEKLGFAQAMMPRRRSKTKLKKSGIRLIEMPDL 449
BLAST of mRNA_D-herbacea_F_contig1050.574.1 vs. uniprot
Match: W6KAX5_MAGSQ (DNA repair protein RadA n=1 Tax=Magnetospira sp. (strain QH-2) TaxID=1288970 RepID=W6KAX5_MAGSQ) HSP 1 Score: 598 bits (1541), Expect = 1.480e-210 Identity = 316/455 (69.45%), Postives = 369/455 (81.10%), Query Frame = 1
Query: 1 MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETV-EATPIGGGKRSGTGGSGKALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAPKGRAAKESK-ADDIAINAISDVSQLIR 1359
M K R+VCQ+CGA P+WAGKC+AC AWNS+ EE E+ P G GK G G+ ++FV L G + Q PR +GI E DRV GGGLV GSA L+GGDPGIGKSTLLLQ AALSA A AYISGEE+++Q+R+RA R+ ++D KV+LAAATSVRDI+A+L+ PD ++A+IDSIQTMY+D LDSAPGTVGQVRAS+ ELIR+AKRRG I+LVGHVTKEGAIAGPRVLEHMVDTVLYFEG+RGH FRI+R VKNRFG TDEIGVF+MTE+GL EV NPSALFLAD QD V+GA VFAG+EGSRP+LVE+Q+L+APS + TPRRAVVGWDS RLAMLLAV++AR L LS ++VYLNVAGGLRI EPAADLAVAAA+ SS+ G PVP TVVFGEVGLSGEVRAVGR DARLKEA KLGFTRAI PK R K + + +N IS + L+R
Sbjct: 1 MPKSTTRYVCQQCGASYPKWAGKCEACGAWNSLAEEQAPESAPKGLGK-----GKGRKIEFVDLDGPAGQTPRAVTGIAEFDRVCGGGLVPGSALLVGGDPGIGKSTLLLQVTAALSAQAPCAYISGEESVDQVRLRAARMGLADAKVQLAAATSVRDIVATLEGPDAPKLAIIDSIQTMYLDNLDSAPGTVGQVRASSHELIRLAKRRGITIVLVGHVTKEGAIAGPRVLEHMVDTVLYFEGDRGHHFRIMRAVKNRFGATDEIGVFEMTEKGLAEVPNPSALFLADHQDDVSGACVFAGLEGSRPVLVELQSLIAPSTMSTPRRAVVGWDSGRLAMLLAVMDARCDLSLSDQEVYLNVAGGLRITEPAADLAVAAALASSVGGKPVPKGTVVFGEVGLSGEVRAVGRADARLKEAAKLGFTRAIIPKRRQKDADKNPEGLTVNEISHLDDLLR 450
BLAST of mRNA_D-herbacea_F_contig1050.574.1 vs. uniprot
Match: A8U1S8_9PROT (DNA repair protein RadA n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A8U1S8_9PROT) HSP 1 Score: 596 bits (1536), Expect = 1.410e-209 Identity = 312/458 (68.12%), Postives = 369/458 (80.57%), Query Frame = 1
Query: 1 MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVEATPIGGGKRSGTGGSGKALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAP----KGRAAKESKADDIAINAISDVSQLIRD 1362
MAK FVCQ+CG+V P+WAGKC+AC AWN++VEE VE+ +S G G+ L FV L G++ PR +GI E DRVLGGGLV GSATLIGGDPGIGKST+LLQ A L+ + AY+SGEE+++Q+RMRA+RL ++ V LAAAT+VRDI+ASLD D + VIDSIQTMYVD LDSAPGTV QVRASAQELIR+AK+RG A+LLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGH FRILRGVKNRFGPTDEIGVF+MTERGL EV NPSALFL+DRQD V+GA VFAG+EG+RP+LVEIQALVAPS GTPRRAVVGWDSNRLAM+ AVLEAR G+ L+G DV+LNVAGGLR+ EPAADLAVAAA++SSLTG+PVP +VVFGE+GL+ EVRAV + RLKEA KLGF++A+ P KG + +AI+ + D+ +L+ D
Sbjct: 1 MAKSTSTFVCQDCGSVHPKWAGKCEACGAWNTLVEEIVESAA----PKSMRPGGGRRLAFVELDGETTDAPRRVTGIGEFDRVLGGGLVPGSATLIGGDPGIGKSTVLLQVVAGLAGQSKCAYVSGEESVDQVRMRARRLGIASASVGLAAATNVRDIVASLDTADRPDIIVIDSIQTMYVDALDSAPGTVTQVRASAQELIRIAKKRGVAVLLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHQFRILRGVKNRFGPTDEIGVFEMTERGLVEVGNPSALFLSDRQDDVSGACVFAGMEGTRPVLVEIQALVAPSPFGTPRRAVVGWDSNRLAMVTAVLEARCGVSLAGNDVFLNVAGGLRVSEPAADLAVAAALISSLTGVPVPKASVVFGEIGLAAEVRAVTHAEPRLKEAAKLGFSKALLPAVRRKGGGPSAGGLELVAISRLHDLVELLHD 454
BLAST of mRNA_D-herbacea_F_contig1050.574.1 vs. uniprot
Match: A0A3N1M668_9PROT (DNA repair protein RadA n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1M668_9PROT) HSP 1 Score: 594 bits (1532), Expect = 5.700e-209 Identity = 311/452 (68.81%), Postives = 368/452 (81.42%), Query Frame = 1
Query: 1 MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVEATPIGGGKRSGTG-GSGKALDFVGLKGDSEQRPRLKSGIDELDRVLGGGLVDGSATLIGGDPGIGKSTLLLQAAAALSAHASVAYISGEEAIEQIRMRAQRLNVSDTKVELAAATSVRDILASLDRPDGARVAVIDSIQTMYVDLLDSAPGTVGQVRASAQELIRVAKRRGTAILLVGHVTKEGAIAGPRVLEHMVDTVLYFEGERGHPFRILRGVKNRFGPTDEIGVFDMTERGLEEVKNPSALFLADRQDGVAGAAVFAGIEGSRPMLVEIQALVAPSALGTPRRAVVGWDSNRLAMLLAVLEARGGLDLSGRDVYLNVAGGLRIGEPAADLAVAAAIVSSLTGIPVPMRTVVFGEVGLSGEVRAVGRPDARLKEAGKLGFTRAIAPKGRAAKESKADDIAINAISDVSQL 1353
MA+P RFVCQ+CGAV P+WAG+C+ C AWNS+VEET G G G G G G+ ++ VGL+G + PR +GI E DRV GGGLV GSA L+GGDPGIGKSTLLLQ AA L+ +V YISGEEAIEQ+RMRA+RL+V+ + V LAAATSVRDI+ASLD+ + VIDSIQTMY+D LDSAPGTV QVR+SAQELIR+AKRRG A++LVGHVTKEG IAGPRVLEHMVDTVLYFEGERGH FRILR VKNRFGPTDEIGVF+MT+RGL+EV NPSALFLADRQ ++GAAVFAG+EG+RPMLVEIQALVAPSA GTPRRAVVGWD RL+M+LAVLEARGG+ + G D+YLNVAGGLRI EPAADLAVAAA++S+ TG +P TVVFGE+GLSGEVRAV + + RLKEAGKLGF A+ P R + +++ ++ + I V++L
Sbjct: 1 MARPAARFVCQQCGAVHPKWAGRCEDCGAWNSLVEETG-----GDGPPKGLGTGKGRRIELVGLEGSEQDAPRRVTGIGEFDRVAGGGLVPGSALLVGGDPGIGKSTLLLQVAARLAGSGTVLYISGEEAIEQVRMRARRLDVAGSPVSLAAATSVRDIVASLDQGPAPALVVIDSIQTMYLDSLDSAPGTVAQVRSSAQELIRLAKRRGFALVLVGHVTKEGTIAGPRVLEHMVDTVLYFEGERGHQFRILRAVKNRFGPTDEIGVFEMTDRGLDEVLNPSALFLADRQGDISGAAVFAGMEGTRPMLVEIQALVAPSAPGTPRRAVVGWDGGRLSMILAVLEARGGVAIGGNDIYLNVAGGLRIQEPAADLAVAAALISASTGQALPAATVVFGEIGLSGEVRAVSQTEQRLKEAGKLGFEHALMPPQRGRRLARSAEVTLQEIGTVAEL 447 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1050.574.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig1050.574.1 >prot_D-herbacea_F_contig1050.574.1 ID=prot_D-herbacea_F_contig1050.574.1|Name=mRNA_D-herbacea_F_contig1050.574.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=473bp MAKPQKRFVCQECGAVTPRWAGKCDACEAWNSIVEETVEATPIGGGKRSGback to top mRNA from alignment at D-herbacea_F_contig1050:18448..19866- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig1050.574.1 ID=mRNA_D-herbacea_F_contig1050.574.1|Name=mRNA_D-herbacea_F_contig1050.574.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=1419bp|location=Sequence derived from alignment at D-herbacea_F_contig1050:18448..19866- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig1050:18448..19866- >mRNA_D-herbacea_F_contig1050.574.1 ID=mRNA_D-herbacea_F_contig1050.574.1|Name=mRNA_D-herbacea_F_contig1050.574.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2838bp|location=Sequence derived from alignment at D-herbacea_F_contig1050:18448..19866- (Desmarestia herbacea DmunF female)back to top |