prot_D-herbacea_F_contig105.562.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig105.562.1
Unique Nameprot_D-herbacea_F_contig105.562.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length177
Homology
BLAST of mRNA_D-herbacea_F_contig105.562.1 vs. uniprot
Match: A0A6H5L805_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L805_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 3.870e-52
Identity = 86/112 (76.79%), Postives = 101/112 (90.18%), Query Frame = 0
Query:    1 MALVDTQGFVMAVDRSLFGPQGRRWIERKLPDVATNISFIAVSAFGACVLVFHICQEYHVLGYRAILQTPKHVINGIVVHLAVRALRWHIDRMLGRNFLSGDGAMPNFFVSS 112
            MALVDTQGFVMAVDRSLFGPQGRRWIERKLP+VATN++F+AVSAFGAC+LVFHI +EY+  GY AILQTPKH++N +V+HL  RALRWHIDRMLG NF +GD A+P+FF S+
Sbjct:    1 MALVDTQGFVMAVDRSLFGPQGRRWIERKLPNVATNLAFVAVSAFGACLLVFHITREYYTSGYWAILQTPKHILNAVVLHLVARALRWHIDRMLGVNFAAGDEALPDFFGST 112          
BLAST of mRNA_D-herbacea_F_contig105.562.1 vs. uniprot
Match: A0A835ZHV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHV2_9STRA)

HSP 1 Score: 115 bits (287), Expect = 9.520e-27
Identity = 55/103 (53.40%), Postives = 72/103 (69.90%), Query Frame = 0
Query:    1 MALVDTQGFVMAVDRSLFGPQGRRWIERKLPDVATNISFIAVSAFGACVLVFHICQEYHVLGYRAILQT-PKHVINGIVVHLAVRALRWHIDRMLGRNFLSGD 102
            MALVD     +AVDRSLFGPQGRRWIERKLP+V +N++FI VS FGAC+L+F IC +Y   G+   L   PKH+    +VHL  + LRWHI +++  +F+  D
Sbjct:    1 MALVDINPLTVAVDRSLFGPQGRRWIERKLPEVTSNMTFIMVSGFGACLLMFGICTDYQRFGFVGGLGCLPKHIAAATLVHLLAKLLRWHITQVVQGSFMPDD 103          
BLAST of mRNA_D-herbacea_F_contig105.562.1 vs. uniprot
Match: D8LSC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC9_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 1.090e-15
Identity = 35/57 (61.40%), Postives = 44/57 (77.19%), Query Frame = 0
Query:   54 ICQEYHVLGYRAILQTPKHVINGIVVHLAVRALRWHIDRMLGRNFLSGDGAMPNFFV 110
            I +EY+  GY AILQTPKH++N +V+HL  RALRWHIDRMLG NF +GD  M ++ V
Sbjct:    9 ITREYYKSGYWAILQTPKHILNAVVLHLVARALRWHIDRMLGVNFAAGDEGMNSWRV 65          
BLAST of mRNA_D-herbacea_F_contig105.562.1 vs. uniprot
Match: A0A835YVS8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS8_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 9.030e-14
Identity = 41/85 (48.24%), Postives = 50/85 (58.82%), Query Frame = 0
Query:   27 ERKLPDVATNISFIAVSAFGACVLVFHICQEYHVLGY-RAILQTPKHVINGIVVHLAVRALRWHIDRMLGRNFLSGDGAMPNFFV 110
            E KLP V +NI+FI VS FGAC+L+F +C +Y   G  R     PKH+ N  V+HL  R LRWHI R + R F   D   PN F 
Sbjct:   61 EHKLPYVVSNITFILVSGFGACLLMFTVCADYQRGGLLRGAAALPKHLANAAVLHLVARLLRWHIGRTVYRAFAPADD-RPNVFT 144          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig105.562.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L805_9PHAE3.870e-5276.79Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835ZHV2_9STRA9.520e-2753.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LSC9_ECTSI1.090e-1561.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YVS8_9STRA9.030e-1448.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..54
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 55..177
NoneNo IPR availableTMHMMTMhelixcoord: 33..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig105contigD-herbacea_F_contig105:812818..819418 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig105.562.1mRNA_D-herbacea_F_contig105.562.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig105 812818..819627 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig105.562.1 ID=prot_D-herbacea_F_contig105.562.1|Name=mRNA_D-herbacea_F_contig105.562.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=177bp
MALVDTQGFVMAVDRSLFGPQGRRWIERKLPDVATNISFIAVSAFGACVL
VFHICQEYHVLGYRAILQTPKHVINGIVVHLAVRALRWHIDRMLGRNFLS
GDGAMPNFFVSSPKNQDDGPDGDKPPVLWPWKSGHAAAQSKNHSDVESTT
SDHDQRHGWWDSGGGGGGAGSRKENRA
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