prot_D-herbacea_F_contig105.558.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig105.558.1
Unique Nameprot_D-herbacea_F_contig105.558.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length188
Homology
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BLAST of mRNA_D-herbacea_F_contig105.558.1 vs. uniprot
Match: A0A6H5KX33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX33_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 2.180e-41
Identity = 100/211 (47.39%), Postives = 121/211 (57.35%), Query Frame = 0 
Query:    1 MNERHQPPTLVDLKAKYFQHILAVSPTQDPTLRS--------------RPTGCTCLFSEVG-------------EEPGTTTVDTFATAAVAPCASDVLAEEAVEMLSPGEKDEIILQMHAKIRSLNGRVEEVIALSERTVYSQERAHEEALREQRASEQRLRRELSQWKHCHPVVTELLEENARLREEAHLGRRQYLAALGKLARRQELLE 184
            M  R  P T+  LK KYFQH+L VS T+ P+L S              R T CTC  + +G             +E   +T     T    P +SD LA+EA+ +LS  EKD IIL MHAK+R L+ R E+  ++SER V   ERAH +ALRE+  SEQRLR EL QWKH HP V EL  EN RLREE    +RQYLA LGKLARR  LL+
Sbjct:    1 MTTREPPSTISGLKTKYFQHVLDVSSTE-PSLSSSSSSEAAVRWDQPTRRTECTCRTTMMGCTCWGDTKEAYPSDEDAPSTTHVLRTPPPVPSSSDALAKEALSILSQAEKDRIILLMHAKLRHLSHRAEDARSVSERKVCCLERAHRDALRERMLSEQRLREELRQWKHHHPEVAELRLENQRLREEKDHSQRQYLAVLGKLARRHTLLK 210
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BLAST of mRNA_D-herbacea_F_contig105.558.1 vs. uniprot
Match: D7G3C8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C8_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 1.620e-17
Identity = 52/95 (54.74%), Postives = 61/95 (64.21%), Query Frame = 0 
Query:   91 MHAKIRSLNGRVEEVIALSERTVYSQERAHEEALREQRASEQRLRRELSQWKHCHPVVTELLEENARLREEAHLGRRQYLAALGKLARRQELLET 185
            MHAK+R L+ R E+  ++SER     ERAH +ALRE+  SEQRLR EL QWKH HP          RLREE    +RQYLA LGKLARR   L+T
Sbjct:    1 MHAKLRHLSHRAEDARSVSERKACCLERAHRDALRERMLSEQRLREELRQWKHHHPE---------RLREEKDHSQRQYLAVLGKLARRHTWLKT 86
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig105.558.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KX33_9PHAE2.180e-4147.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3C8_ECTSI1.620e-1754.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 117..137
NoneNo IPR availableCOILSCoilCoilcoord: 148..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig105contigD-herbacea_F_contig105:753725..758946 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig105.558.1mRNA_D-herbacea_F_contig105.558.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig105 753705..759081 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig105.558.1 ID=prot_D-herbacea_F_contig105.558.1|Name=mRNA_D-herbacea_F_contig105.558.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=188bp
MNERHQPPTLVDLKAKYFQHILAVSPTQDPTLRSRPTGCTCLFSEVGEEP
GTTTVDTFATAAVAPCASDVLAEEAVEMLSPGEKDEIILQMHAKIRSLNG
RVEEVIALSERTVYSQERAHEEALREQRASEQRLRRELSQWKHCHPVVTE
LLEENARLREEAHLGRRQYLAALGKLARRQELLETRR*
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