prot_D-herbacea_F_contig105.556.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig105.556.1
Unique Nameprot_D-herbacea_F_contig105.556.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length105
Homology
BLAST of mRNA_D-herbacea_F_contig105.556.1 vs. uniprot
Match: D7G3C6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C6_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 4.880e-56
Identity = 90/100 (90.00%), Postives = 97/100 (97.00%), Query Frame = 0
Query:    3 ASSLGQDIKEFLENEKDVEFEEEISRNPYRLKSWWRYLLAKEGARRKTRNVIHERALKFLPNSYKLWHQYLGERRTAVEGKCVTDAACQIVINAHERALV 102
            ASSLGQDIKEFLENEKD+EFEEEISRNPYRLKSWWRYLLAKEGA+RKTRN+IHERALKFLPNSYKLW+QYL ERR AVEGKC+TD ACQIV+NAHERAL+
Sbjct:    9 ASSLGQDIKEFLENEKDIEFEEEISRNPYRLKSWWRYLLAKEGAKRKTRNIIHERALKFLPNSYKLWNQYLRERRAAVEGKCITDPACQIVVNAHERALI 108          
BLAST of mRNA_D-herbacea_F_contig105.556.1 vs. uniprot
Match: A0A7S3YB58_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YB58_HETAK)

HSP 1 Score: 128 bits (322), Expect = 7.290e-35
Identity = 65/95 (68.42%), Postives = 75/95 (78.95%), Query Frame = 0
Query:    9 DIKEFLENEKDVEFEEEISRNPYRLKSWWRYLLAKEGARRKTRNVIHERALKFLPNSYKLWHQYLGERRTAVEGKCVTDAACQIVINAHERALVS 103
            DIK FLE+E D E+EEEISRNPY LKSWWRYL  K+ AR KTR V++ERALKFLP S+KLWH YL ER  AVE K V D A ++V NA+ERALV+
Sbjct:   26 DIKSFLESEADFEYEEEISRNPYALKSWWRYLDHKKNARPKTRYVVYERALKFLPGSFKLWHSYLKERTLAVEDKSVLDPAREVVANAYERALVT 120          
BLAST of mRNA_D-herbacea_F_contig105.556.1 vs. uniprot
Match: A0A836CA78_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA78_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.260e-32
Identity = 60/95 (63.16%), Postives = 74/95 (77.89%), Query Frame = 0
Query:    7 GQDIKEFLENEKDVEFEEEISRNPYRLKSWWRYLLAKEGARRKTRNVIHERALKFLPNSYKLWHQYLGERRTAVEGKCVTDAACQIVINAHERAL 101
            G++++  L +  D E+E EISR P+RLK+W RYL AK    R+ RN++HERALKFLP SYKLWHQYL ER +AVEGKC+TD ACQIV+N  ERAL
Sbjct:    8 GEEVQALLADATDFEYETEISRAPFRLKNWVRYLAAKTSTNRRARNILHERALKFLPTSYKLWHQYLTERLSAVEGKCITDPACQIVVNTFERAL 102          
BLAST of mRNA_D-herbacea_F_contig105.556.1 vs. uniprot
Match: A0A151NRD7_ALLMI (Pre-mRNA-splicing factor SYF1-like n=2 Tax=Alligator mississippiensis TaxID=8496 RepID=A0A151NRD7_ALLMI)

HSP 1 Score: 97.4 bits (241), Expect = 4.050e-24
Identity = 47/86 (54.65%), Postives = 63/86 (73.26%), Query Frame = 0
Query:   17 EKDVEFEEEISRNPYRLKSWWRYLLAKEGARRKTRNVIHERALKFLPNSYKLWHQYLGERRTAVEGKCVTDAACQIVINAHERALV 102
            E+D+++EEEI RNP+ +K W RY+  K+ A R   N+++ERALK LP SYKLW+ YL +RR  V+ +CVTD A + V N HERALV
Sbjct:   19 EEDLQYEEEILRNPFSVKCWMRYIEFKQSAPRHALNLLYERALKELPGSYKLWYNYLKQRRKQVKNRCVTDPAYEEVNNCHERALV 104          
BLAST of mRNA_D-herbacea_F_contig105.556.1 vs. uniprot
Match: I6M4B7_KRYMA (XAB2 (Fragment) n=1 Tax=Kryptolebias marmoratus TaxID=37003 RepID=I6M4B7_KRYMA)

HSP 1 Score: 97.8 bits (242), Expect = 6.010e-24
Identity = 47/84 (55.95%), Postives = 61/84 (72.62%), Query Frame = 0
Query:   19 DVEFEEEISRNPYRLKSWWRYLLAKEGARRKTRNVIHERALKFLPNSYKLWHQYLGERRTAVEGKCVTDAACQIVINAHERALV 102
            D+ +EEEI RNPY +K W RY+  K+   + T N+I+ERAL+ LP SYKLW+ YL ERR  V+GKC+T+ A + V N HERALV
Sbjct:   13 DLPYEEEIIRNPYSVKCWMRYIEFKQNGPKSTLNMIYERALRELPGSYKLWYNYLRERRKQVKGKCITEPAFEEVNNCHERALV 96          
BLAST of mRNA_D-herbacea_F_contig105.556.1 vs. uniprot
Match: A0A0S7LQ32_9TELE (SYF1 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7LQ32_9TELE)

HSP 1 Score: 99.4 bits (246), Expect = 6.770e-24
Identity = 48/84 (57.14%), Postives = 60/84 (71.43%), Query Frame = 0
Query:   19 DVEFEEEISRNPYRLKSWWRYLLAKEGARRKTRNVIHERALKFLPNSYKLWHQYLGERRTAVEGKCVTDAACQIVINAHERALV 102
            D+ +EEEI RNPY +K W RY+  K+   + T N+I+ERALK LP SYKLW+ YL ERR  V+GKC+TD   + V N HERALV
Sbjct:   46 DLPYEEEIIRNPYSVKCWMRYIEFKQNGAKSTLNMIYERALKELPGSYKLWYNYLRERRKQVKGKCITDPTYEEVNNCHERALV 129          
BLAST of mRNA_D-herbacea_F_contig105.556.1 vs. uniprot
Match: A0A672MZQ1_SINGR (XPA binding protein 2 n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672MZQ1_SINGR)

HSP 1 Score: 103 bits (257), Expect = 1.380e-23
Identity = 51/89 (57.30%), Postives = 65/89 (73.03%), Query Frame = 0
Query:   14 LENEKDVEFEEEISRNPYRLKSWWRYLLAKEGARRKTRNVIHERALKFLPNSYKLWHQYLGERRTAVEGKCVTDAACQIVINAHERALV 102
            L+ + D+ +EEEI RNPY +K W RY+  K+ A++   N+I+ERALK LP SYKLW+ YL ERR  V+GKCVTD A + V N HERALV
Sbjct:    4 LQEDDDLPYEEEIIRNPYSVKCWMRYIEHKQNAQKSVLNMIYERALKELPGSYKLWYNYLRERRKQVKGKCVTDPAYEEVNNCHERALV 92          
BLAST of mRNA_D-herbacea_F_contig105.556.1 vs. uniprot
Match: A0A2G9SJ12_LITCT (Uncharacterized protein n=1 Tax=Lithobates catesbeianus TaxID=8400 RepID=A0A2G9SJ12_LITCT)

HSP 1 Score: 94.7 bits (234), Expect = 3.730e-23
Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = 0
Query:   17 EKDVEFEEEISRNPYRLKSWWRYLLAKEGARRKTRNVIHERALKFLPNSYKLWHQYLGERRTAVEGKCVTDAACQIVINAHERALV 102
            E D+++EEEI RNPY +K W RY+  K+ A     N+I+ERALK LP SYKLW+ YL +RR  V+ +C+TD A + V N HERALV
Sbjct:    8 EDDLQYEEEILRNPYSVKCWMRYIEFKQSASAHALNLIYERALKELPGSYKLWYAYLKQRRKQVKRRCLTDPAFEEVNNCHERALV 93          
BLAST of mRNA_D-herbacea_F_contig105.556.1 vs. uniprot
Match: A0A673G278_9TELE (XPA binding protein 2 n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=A0A673G278_9TELE)

HSP 1 Score: 101 bits (252), Expect = 5.150e-23
Identity = 50/84 (59.52%), Postives = 62/84 (73.81%), Query Frame = 0
Query:   19 DVEFEEEISRNPYRLKSWWRYLLAKEGARRKTRNVIHERALKFLPNSYKLWHQYLGERRTAVEGKCVTDAACQIVINAHERALV 102
            D+ +EEEI RNPY +K W RY+  K+ A++   N+I+ERALK LP SYKLW+ YL ERR  V+GKCVTD A + V N HERALV
Sbjct:   16 DLPYEEEIIRNPYSVKCWMRYIEHKQNAQKSVLNMIYERALKELPGSYKLWYNYLRERRKQVKGKCVTDPAYEEVNNCHERALV 99          
BLAST of mRNA_D-herbacea_F_contig105.556.1 vs. uniprot
Match: A0A556VCM1_BAGYA (Pre-mRNA-splicing factor SYF1 n=1 Tax=Bagarius yarrelli TaxID=175774 RepID=A0A556VCM1_BAGYA)

HSP 1 Score: 102 bits (253), Expect = 5.220e-23
Identity = 51/88 (57.95%), Postives = 62/88 (70.45%), Query Frame = 0
Query:   15 ENEKDVEFEEEISRNPYRLKSWWRYLLAKEGARRKTRNVIHERALKFLPNSYKLWHQYLGERRTAVEGKCVTDAACQIVINAHERALV 102
            E E D+ +EEEI RNPY +K W RY+  K  A +   N+I+ERALK LP SYKLW+ YL ERR  ++GKCVTD A + V N HERALV
Sbjct: 1263 EEEDDLPYEEEIIRNPYSVKCWMRYIEHKHNAPKSVLNMIYERALKELPGSYKLWYNYLRERRKQIKGKCVTDPAYEEVNNCHERALV 1350          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig105.556.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3C6_ECTSI4.880e-5690.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3YB58_HETAK7.290e-3568.42Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A836CA78_9STRA1.260e-3263.16Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A151NRD7_ALLMI4.050e-2454.65Pre-mRNA-splicing factor SYF1-like n=2 Tax=Alligat... [more]
I6M4B7_KRYMA6.010e-2455.95XAB2 (Fragment) n=1 Tax=Kryptolebias marmoratus Ta... [more]
A0A0S7LQ32_9TELE6.770e-2457.14SYF1 (Fragment) n=1 Tax=Poeciliopsis prolifica Tax... [more]
A0A672MZQ1_SINGR1.380e-2357.30XPA binding protein 2 n=1 Tax=Sinocyclocheilus gra... [more]
A0A2G9SJ12_LITCT3.730e-2354.65Uncharacterized protein n=1 Tax=Lithobates catesbe... [more]
A0A673G278_9TELE5.150e-2359.52XPA binding protein 2 n=1 Tax=Sinocyclocheilus rhi... [more]
A0A556VCM1_BAGYA5.220e-2357.95Pre-mRNA-splicing factor SYF1 n=1 Tax=Bagarius yar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 22..104
e-value: 2.8E-7
score: 32.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 23..74
NoneNo IPR availablePANTHERPTHR11246:SF21coord: 13..103
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 13..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig105contigD-herbacea_F_contig105:742337..746866 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig105.556.1mRNA_D-herbacea_F_contig105.556.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig105 742337..747333 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig105.556.1 ID=prot_D-herbacea_F_contig105.556.1|Name=mRNA_D-herbacea_F_contig105.556.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=105bp
MAASSLGQDIKEFLENEKDVEFEEEISRNPYRLKSWWRYLLAKEGARRKT
RNVIHERALKFLPNSYKLWHQYLGERRTAVEGKCVTDAACQIVINAHERA
LVSC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf