prot_D-herbacea_F_contig105.554.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig105.554.1
Unique Nameprot_D-herbacea_F_contig105.554.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length518
Homology
BLAST of mRNA_D-herbacea_F_contig105.554.1 vs. uniprot
Match: A0A6H5KXP9_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXP9_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 6.980e-73
Identity = 112/157 (71.34%), Postives = 137/157 (87.26%), Query Frame = 0
Query:  361 DGAGWWSRYEHESISTADLALTLVSSSHPRDMPVLLARVRAIRKNQIQVPLNDALLLREVLQDHAQDLEDALGLYVKASSTGAVGMDDFARAAKVVSGQDLSPECVWVVFKMFDSAGDGRLQHEDIVEATHDRLRLLPGQRDSPGMLSRFVHCVRGD 517
            DG+GWWSRY++++IS ADLALTLVS+SHPR MPV LARV+AI+K + Q+PL DALLL EVL+DHAQDLEDALG+Y KASS GAV   DFARAAKV+SG++LSPECVW+VFKMFDS  DGRL+H++++EATH RLR LPG+R+ P  ++RFV CVRGD
Sbjct:   72 DGSGWWSRYKNDTISMADLALTLVSTSHPRKMPVFLARVQAIQKKRKQIPLRDALLLHEVLEDHAQDLEDALGMYSKASSGGAVTATDFARAAKVISGKELSPECVWLVFKMFDSGADGRLEHDELIEATHHRLRSLPGRREFPNSVARFVQCVRGD 228          
BLAST of mRNA_D-herbacea_F_contig105.554.1 vs. uniprot
Match: A0A6H5L3M7_9PHAE (EF-hand domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M7_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 2.710e-64
Identity = 102/130 (78.46%), Postives = 115/130 (88.46%), Query Frame = 0
Query:   93 CVCKSNVTDADSLQDYARRLQRLRCLRDIFDEYATVNAEGVGKLMTCGDFLRAMLCYRYVRVGSRELKRRCARYVNPLLGDVHGLISFDEFCFLLKLLSIPAGLFDVAFTAADSDGSGTIDVQELKTLVK 222
            C+CK   +  DSL+DYARRLQRLR LRDIF+EYATV+A+ VGKLMTCGDFLRAMLCY+YVRV ++ELKRRCARY+NPLLGD H LISFDEFCFLL LLSIPAGL DVAF AAD+DGSGTID+ EL+ LVK
Sbjct:   26 CLCKGKTSATDSLEDYARRLQRLRSLRDIFEEYATVDADDVGKLMTCGDFLRAMLCYKYVRVDAKELKRRCARYINPLLGDDHSLISFDEFCFLLNLLSIPAGLLDVAFAAADADGSGTIDMHELERLVK 155          
BLAST of mRNA_D-herbacea_F_contig105.554.1 vs. uniprot
Match: D7G3D0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D0_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 1.280e-42
Identity = 73/90 (81.11%), Postives = 82/90 (91.11%), Query Frame = 0
Query:   93 CVCKSNVTDADSLQDYARRLQRLRCLRDIFDEYATVNAEGVGKLMTCGDFLRAMLCYRYVRVGSRELKRRCARYVNPLLGDVHGLISFDE 182
            C+CK   + ADSL+DYARRLQRLR LRDIF+EYATVNA+ VGKLMTCGDFLRAMLCY+YVRV ++ELKRRCARY+NPLLGD HGLISFDE
Sbjct:  104 CLCKGKASAADSLEDYARRLQRLRSLRDIFEEYATVNADDVGKLMTCGDFLRAMLCYKYVRVDAKELKRRCARYINPLLGDDHGLISFDE 193          
BLAST of mRNA_D-herbacea_F_contig105.554.1 vs. uniprot
Match: E4X3N8_OIKDI (Uncharacterized protein n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4X3N8_OIKDI)

HSP 1 Score: 74.3 bits (181), Expect = 1.310e-10
Identity = 94/419 (22.43%), Postives = 156/419 (37.23%), Query Frame = 0
Query:   96 KSNVTDADSLQDYARRLQRLRCLRDIFDEYATVNAEGVGKLMTCGDFLRAML-------CYRYVRVGSRELKRRCARYVNPL-------------LGDVHGLISFDEFCFLLKLLSIPAGLFDVAFTAADSDGSGTIDVQELKTLVKRLAPADXXXXXXXXXXXXXXDKEGDDTPQAPQLTGHKRLSAAWFGNDGMGSIPREEFASFVRDLRKDVNTVECRLYSSTTPASTGAHATGNDNQQGDGSQGRGILSWWPLSWLSGSGGDGSIASREGGRGGGIGGEGKDGAGWWSRYEHESISTADLALTLVSSSHPRDMPVLLARVRAIRKNQIQVPLNDALLLREVLQDHAQDLEDALGLYVKASSTGAVGMDDFARAAKVVSGQDLSPECVWVVFKMFDSAGDGRLQHEDIVEATHDRL 494
            K    +A S +D  R  Q++   R  F+ +ATV   G    MT  DFL ++         Y+ +     E++    +   P              LG  +G+IS++E+ FLL +++ P   FDVAF   D+DG+  ID  E K L      +                 E     ++ +      L   +FG DG   I  ++F SF+++L+ +V  +E   ++                                  W                                       I+  + A  L+  +   DM   L R+R    NQ  + + +       L ++ +D   A+  Y  A+    +G ++F RA K+ +G+DLS   V VVF +FD  GD +L H++ +    DRL
Sbjct:   39 KRREVEARSRRDEGR--QKVNAKRRRFENFATVQINGE-LFMTPADFLESVTEDHPRKSAYK-ISFSVAEIEATLKKQTPPREIIEKGETDFFRKLGK-NGIISYNEYLFLLCIITKPKQGFDVAFKMFDTDGNELIDSDEFKVLEDIFRQS----------------AENVTNKESTKNDFGTTLRFLFFGEDGTQQINHKQFYSFMQNLQAEVLELEFNAFAR-------------------------------CKW--------------------------------------DITELEFAEMLLRYTDQWDMEQQLERIRGRLSNQEGISMEEFKSFFFFL-NNLEDFATAIHYYALANQP--IGTEEFHRAVKISTGEDLSENLVNVVFAIFDKDGDRKLSHKEFIGVMSDRL 364          
BLAST of mRNA_D-herbacea_F_contig105.554.1 vs. uniprot
Match: A0A485KXW3_9STRA (Aste57867_13074 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KXW3_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 5.950e-10
Identity = 56/206 (27.18%), Postives = 90/206 (43.69%), Query Frame = 0
Query:  103 DSLQDYARRLQRLRCLRDIFDEYATV---NAEGVG-KLMTCGDFLRAMLCYRY-VRVGSRELKRRCARYVNPLLGDVHGLISFDEFCFLLKLLSIPAGLFDVAFTAADSDGSGTIDVQELKTLVKRLAPADXXXXXXXXXXXXXXDKEGDDTPQAPQLTGHKRLSAAWFGNDGMGSIPREEFASFVRDLRKDVNTVECRLYSSTTP 303
            DSL+ Y   +     +   FD +AT    + +G   K MT  DFL +++  R+ +    R ++ +C       +GDV GLIS++E   L  LL IP   FDVAF   D DG+GT+D  E   ++  +                     G       Q+     L   +FG +G   I  +EF + ++ L++ +   E  +Y+   P
Sbjct:   74 DSLKKYKEDIAAFDSVEARFDTFATAVTKDKDGARLKAMTFTDFLHSLVLPRFRISHPPRTIQYKC-----DFVGDVDGLISYEECHLLYHLLDIPVEHFDVAFHMFDLDGNGTVDKAEFLEVLSSVL----NNIKDKRITTAAESASGKSASNEVQVEASYHLLLHFFGKNGRKKITSKEFIAVIQSLKESLLRAEFDMYAHVDP 270          
BLAST of mRNA_D-herbacea_F_contig105.554.1 vs. uniprot
Match: A0A2D4BZW7_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZW7_PYTIN)

HSP 1 Score: 70.1 bits (170), Expect = 3.800e-9
Identity = 48/142 (33.80%), Postives = 69/142 (48.59%), Query Frame = 0
Query:  374 ISTADLALTLVSSSHPRDMPVLLARVRAIRKNQIQVPLNDALLLREVLQDHAQDLEDALGLYVKASSTGAVGMDDFARAAKVVSGQDLSPECVWVVFKMFDSAGDGRLQHEDIVEATHDRLRLLPGQRDSPGMLSRFVHCVR 515
            IS  D A+TLVS   P  +   L RV A+  ++  V   D       +Q++  D+  A  L      T A    DF RAA+VVSG +LS   V + F++FDS  +G L   ++++    R  +   QR     L RFV CV+
Sbjct:  320 ISVHDFAITLVSGFDPDRLAPYLERVEALNASEELVTWEDFYKFHANVQNNLADIXLAFDLTHAEEITEA----DFIRAARVVSGVELSFPVVQLAFRVFDSNENGTLDQSELLKVLETRSTIELTQRPPENKLQRFVSCVK 457          
BLAST of mRNA_D-herbacea_F_contig105.554.1 vs. uniprot
Match: A0A5D6XI39_9STRA (EF-hand domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XI39_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 2.550e-8
Identity = 46/149 (30.87%), Postives = 73/149 (48.99%), Query Frame = 0
Query:  367 SRYEHESISTADLALTLVSSSHPRDMPVLLARVRAIRKNQIQVPLNDALLLREVLQDHAQDLEDALGLYVKASSTGAVGMDDFARAAKVVSGQDLSPECVWVVFKMFDSAGDGRLQHEDIVEATHDRLRLLPGQRDSPGMLSRFVHCVR 515
            S    E +S  D A+TLVS   P  +   L R++A+  +Q  V  +D       +Q + +D++ A  L   A  T A    DF RAA+VVSG +LS   V + F++FD   +G L   ++++    R  +   ++     + RF  CVR
Sbjct:  286 SAKHQEVVSVHDFAITLVSCFDPERLAPYLERLQALNASQELVTWDDFYKFHFNVQSNLEDIKLAFDLIGAAEITEA----DFIRAARVVSGVELSFPVVQLAFRVFDGNDNGTLDQTELLKVLEMRRDIELEKKQPATYVKRFWSCVR 430          
BLAST of mRNA_D-herbacea_F_contig105.554.1 vs. uniprot
Match: L8H3D2_ACACA (Calcium binding atopyrelated autoantigen 1, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H3D2_ACACA)

HSP 1 Score: 64.3 bits (155), Expect = 1.890e-7
Identity = 40/152 (26.32%), Postives = 74/152 (48.68%), Query Frame = 0
Query:  366 WSRYEHES---ISTADLALTLVSSSHPRDMPVLLARVRAIRKNQIQVPLNDALLLREVLQDHAQDLEDALGLYVKASSTGAVGMDDFARAAKVVSGQDLSPECVWVVFKMFDSAGDGRLQHEDIVEATHDRLRLLPGQRDSPGMLSRFVHCV 514
            + RY+ +    I+     ++++    P+D+P  L RV ++   + ++   D +     L+   +     +GL VK  + G     DF RA K +SG DL P  + V++ + D  G+G+L H ++VE    R+          G+ +RFV+C+
Sbjct:  219 FDRYDSKGEGKITARAFGMSVIGYVDPKDLPSFLTRVESLDNRKGELSFEDFVNFNRALKKLPE-----IGLAVKLYAQG-----DFGRAVKAISGVDLKPVQIDVIYHVLDKDGNGKLDHNELVEVMAKRVEKGMAHHRDVGV-ARFVNCL 359          
BLAST of mRNA_D-herbacea_F_contig105.554.1 vs. uniprot
Match: A0A484EGG9_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGG9_BRELC)

HSP 1 Score: 62.4 bits (150), Expect = 9.810e-7
Identity = 43/147 (29.25%), Postives = 72/147 (48.98%), Query Frame = 0
Query:  370 EHESISTADLALTLVSSSHPRDMPVLLARVRAIRKNQIQVPLNDALLLREVLQDHAQDLEDALGLYVKASSTGAVGMDDFARAAKVVSGQDLSPECVWVVFKMFDSAGDGRLQHEDIVEATHDRLRLLPGQRDSP-GMLSRFVHCVR 515
            + +++S  D ALTL+S   P+ +P  L RV+A+      V  ++       +Q +  D++ A  L      T A    +F RAA++VSG +LS   V + F++FD  G+G L   ++ E    R  +   Q+ S    L +   CV+
Sbjct:  276 KQQTVSVHDFALTLISGHDPKKLPPYLDRVQALNACDDVVTWDEFCTFHFNVQHNLPDIKLAFELTGADEITEA----EFIRAARIVSGVELSSPVVELAFRIFDENGNGTLDRSELFEGLKMRNTVELKQKSSGRSQLGKLWQCVK 418          
BLAST of mRNA_D-herbacea_F_contig105.554.1 vs. uniprot
Match: A0A4W3IMG7_CALMI (Uncharacterized protein n=3 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3IMG7_CALMI)

HSP 1 Score: 61.2 bits (147), Expect = 1.910e-6
Identity = 37/118 (31.36%), Postives = 64/118 (54.24%), Query Frame = 0
Query:  406 QIQVPLNDALLLREV-----LQDHAQDLEDALGLYVKASSTGAVGMDDFARAAKVVSGQDLSPECVWVVFKMFDSAGDGRLQHEDIVEATHDRLRLLPGQRDSPGM-LSRFVHCVRGD 517
            ++++P  +++   E        +H +D    + ++ K  S   VG+ DF RA KVV+GQ+LS   +  VFK+FD  GDG L H++ + A   RL    G +  P + L+ ++ CV+ +
Sbjct:  244 RLRIPAGESISFEEFRAFCRFMNHLEDFAFTMNMFTK--SNRPVGIADFKRAVKVVTGQELSDNVLDTVFKIFDLDGDGCLSHQEFLGAIMTRLHR--GLKAPPQIGLNGYLKCVKNE 357          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig105.554.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5KXP9_9PHAE6.980e-7371.34EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5L3M7_9PHAE2.710e-6478.46EF-hand domain-containing protein (Fragment) n=1 T... [more]
D7G3D0_ECTSI1.280e-4281.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
E4X3N8_OIKDI1.310e-1022.43Uncharacterized protein n=1 Tax=Oikopleura dioica ... [more]
A0A485KXW3_9STRA5.950e-1027.18Aste57867_13074 protein n=1 Tax=Aphanomyces stella... [more]
A0A2D4BZW7_PYTIN3.800e-933.80Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A5D6XI39_9STRA2.550e-830.87EF-hand domain-containing protein n=1 Tax=Pythium ... [more]
L8H3D2_ACACA1.890e-726.32Calcium binding atopyrelated autoantigen 1, putati... [more]
A0A484EGG9_BRELC9.810e-729.25Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A4W3IMG7_CALMI1.910e-631.36Uncharacterized protein n=3 Tax=Callorhinchus mili... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 196..224
e-value: 1.9E-4
score: 30.8
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 200..221
e-value: 3.1E-5
score: 23.2
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 441..488
e-value: 0.0043
score: 16.9
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 461..496
score: 8.014
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 269..289
score: 6.507
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 192..227
score: 10.803
NoneNo IPR availableGENE3D1.10.238.10coord: 111..296
e-value: 6.3E-9
score: 37.4
IPR039800Calcium uptake protein 1/2/3PANTHERPTHR12294EF HAND DOMAIN FAMILY A1,A2-RELATEDcoord: 47..301
coord: 371..498
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 205..217
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 175..489

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig105contigD-herbacea_F_contig105:698014..712427 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig105.554.1mRNA_D-herbacea_F_contig105.554.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig105 697956..712932 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig105.554.1 ID=prot_D-herbacea_F_contig105.554.1|Name=mRNA_D-herbacea_F_contig105.554.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=518bp
MQSATRITRRSLLRFVTGSTTAHKHRRGTLRLANNNGIACSATTNTARTC
ATSSSSSTTTATCDLAGAAAAAVATAAVLGVGCSMFGDDVEGCVCKSNVT
DADSLQDYARRLQRLRCLRDIFDEYATVNAEGVGKLMTCGDFLRAMLCYR
YVRVGSRELKRRCARYVNPLLGDVHGLISFDEFCFLLKLLSIPAGLFDVA
FTAADSDGSGTIDVQELKTLVKRLAPADDDGGDDDGEGGGGGDKEGDDTP
QAPQLTGHKRLSAAWFGNDGMGSIPREEFASFVRDLRKDVNTVECRLYSS
TTPASTGAHATGNDNQQGDGSQGRGILSWWPLSWLSGSGGDGSIASREGG
RGGGIGGEGKDGAGWWSRYEHESISTADLALTLVSSSHPRDMPVLLARVR
AIRKNQIQVPLNDALLLREVLQDHAQDLEDALGLYVKASSTGAVGMDDFA
RAAKVVSGQDLSPECVWVVFKMFDSAGDGRLQHEDIVEATHDRLRLLPGQ
RDSPGMLSRFVHCVRGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
IPR039800MICU1/2/3
IPR002048EF_hand_dom