prot_D-herbacea_F_contig105.551.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig105.551.1
Unique Nameprot_D-herbacea_F_contig105.551.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length117
Homology
BLAST of mRNA_D-herbacea_F_contig105.551.1 vs. uniprot
Match: D8LSD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSD6_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 4.770e-35
Identity = 105/112 (93.75%), Postives = 108/112 (96.43%), Query Frame = 0
Query:    1 MSISKEKHDELCTSYAALALYDGDAEITGDQINALITATGNEVEPYWPTLFSGFLAKAGVEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-IDMGGGMDMF 111
            MSISKE HDELCTSYAALALYDGDAEIT DQ++ALITATGNEVE YWPTLFSGFLAKAG+EKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IDMGGGMDMF
Sbjct:    1 MSISKELHDELCTSYAALALYDGDAEITSDQLSALITATGNEVEGYWPTLFSGFLAKAGIEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMF 112          
BLAST of mRNA_D-herbacea_F_contig105.551.1 vs. uniprot
Match: A0A835YXP2_9STRA (60s acidic ribosomal protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXP2_9STRA)

HSP 1 Score: 111 bits (277), Expect = 2.370e-29
Identity = 86/107 (80.37%), Postives = 93/107 (86.92%), Query Frame = 0
Query:    8 HDELCTSYAALALYDGDAEITGDQINALITATGNEVEPYWPTLFSGFLAKAGVEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGG 114
            HDELCTSYAALALYDG+AEIT +Q+  LI ATGNEVE YWPTLF+ +LAKAG+E LILA       XXXXXXXXXXXXXXXXXXXXXXXXXXXX+DMGGGMDMFGGG
Sbjct:    5 HDELCTSYAALALYDGEAEITSEQLKTLIEATGNEVEAYWPTLFASYLAKAGIEDLILAVGSAPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGGG 111          
BLAST of mRNA_D-herbacea_F_contig105.551.1 vs. uniprot
Match: F0WMR0_9STRA (Uncharacterized protein AlNc14C160G7746 n=2 Tax=Albugo TaxID=65356 RepID=F0WMR0_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 7.680e-24
Identity = 76/115 (66.09%), Postives = 92/115 (80.00%), Query Frame = 0
Query:    1 MSISKEKHDELCTSYAALALYDGDAEITGDQINALITATGNEVEPYWPTLFSGFLAKAG--VEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGG 113
            M +SKE+HDELC SYA+L L+DG+AEIT D + ++ITA+GNEVEPYWPTLF+GFL+K G  ++ +         XXXXXXXXXXXXXXXXXXXXXXXXX    +D+GGGMDMFGG
Sbjct:    1 MPLSKEQHDELCVSYASLILFDGEAEITSDALMSVITASGNEVEPYWPTLFAGFLSKEGRIMDLITSGGPSSGAXXXXXXXXXXXXXXXXXXXXXXXXXEEADMDLGGGMDMFGG 115          
BLAST of mRNA_D-herbacea_F_contig105.551.1 vs. uniprot
Match: A0A8K1CSL3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSL3_PYTOL)

HSP 1 Score: 96.3 bits (238), Expect = 2.010e-23
Identity = 82/116 (70.69%), Postives = 95/116 (81.90%), Query Frame = 0
Query:    1 MSISKEKHDELCTSYAALALYDGDAEITGDQINALITATGNEVEPYWPTLFSGFLAKAGVEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGGGK 116
            M +SKE+HDELC SYA+L L+DG+AE+T D +  +I A+GNEVEPYWPTLF+G L+K G + L L      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+GGGMDMFGGGG 
Sbjct:    1 MVLSKEQHDELCVSYASLILFDGEAELTSDALTTVIKASGNEVEPYWPTLFAGLLSKEG-KVLELISSGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLGGGMDMFGGGGS 115          
BLAST of mRNA_D-herbacea_F_contig105.551.1 vs. uniprot
Match: W4G6T9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G6T9_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 5.640e-23
Identity = 85/114 (74.56%), Postives = 100/114 (87.72%), Query Frame = 0
Query:    1 MSISKEKHDELCTSYAALALYDGDAEITGDQINALITATGNEVEPYWPTLFSGFLAKAG-VEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGG 113
            M+I+KE+HDEL  SYAAL L+DGDAEIT + ++ +ITA+GNEVEPYWPTLF+G L+K G + +LI + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  D+GGGMDMFGG
Sbjct:   25 MAITKEQHDELAVSYAALVLFDGDAEITSEALSNVITASGNEVEPYWPTLFAGLLSKEGKLLELITSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADLGGGMDMFGG 138          
BLAST of mRNA_D-herbacea_F_contig105.551.1 vs. uniprot
Match: K3WS98_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS98_GLOUD)

HSP 1 Score: 92.8 bits (229), Expect = 4.510e-22
Identity = 83/114 (72.81%), Postives = 95/114 (83.33%), Query Frame = 0
Query:    1 MSISKEKHDELCTSYAALALYDGDAEITGDQINALITATGNEVEPYWPTLFSGFLAKAGVEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGG 114
            MS+SKE+HDELC SYA+L L+DG+AEIT D I+A+I A+GNEV PYWPTLF+  LAK+  + L L    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  D+G GMDMFGGG
Sbjct:    1 MSMSKEQHDELCVSYASLVLFDGEAEITSDAISAVIAASGNEVAPYWPTLFASLLAKSD-KVLELISSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEADLGAGMDMFGGG 113          
BLAST of mRNA_D-herbacea_F_contig105.551.1 vs. uniprot
Match: A0A0P5M2D2_9CRUS (Putative 60S acidic ribosomal protein P1 n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5M2D2_9CRUS)

HSP 1 Score: 92.8 bits (229), Expect = 4.770e-22
Identity = 81/115 (70.43%), Postives = 96/115 (83.48%), Query Frame = 0
Query:    1 MSISKEKHDELCTSYAALALYDGDAEITGDQINALITATGNEVEPYWPTLFSGFLAKAGVEKL-ILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGG 114
            M+ISK +HDELC +YA LAL+DG+AEIT D I ALI A+GNEVEPYWP+LF+G L K+  + L +++     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++GGGMDMFGGG
Sbjct:    1 MAISKAQHDELCVTYATLALFDGEAEITSDAIAALIKASGNEVEPYWPSLFAGLLGKSNKKILDLISSGGPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANIGGGMDMFGGG 115          
BLAST of mRNA_D-herbacea_F_contig105.551.1 vs. uniprot
Match: A0A024UC28_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UC28_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 9.840e-22
Identity = 80/116 (68.97%), Postives = 95/116 (81.90%), Query Frame = 0
Query:    1 MSISKEKHDELCTSYAALALYDGDAEITGDQINALITATGNEVEPYWPTLFSGFLAKAG--VEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGG 114
            M+I+KE+HDEL  SYAAL L+DG+AEIT + ++ +I A+GNEVEPYWPTLF+G L+K G  +E +       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  D+GGGMDMFGGG
Sbjct:    1 MAITKEQHDELAVSYAALILFDGEAEITSEALSTVIAASGNEVEPYWPTLFAGLLSKDGKMLELITSGGAIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADLGGGMDMFGGG 116          
BLAST of mRNA_D-herbacea_F_contig105.551.1 vs. uniprot
Match: A0A2D4BHZ5_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BHZ5_PYTIN)

HSP 1 Score: 91.3 bits (225), Expect = 1.820e-21
Identity = 81/115 (70.43%), Postives = 94/115 (81.74%), Query Frame = 0
Query:    1 MSISKEKHDELCTSYAALALYDGDAEITGDQINALITATGNEVEPYWPTLFSGFLAKAGVEKLI-LAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGG 114
            M +SK++HDELC +YA L L+DG+AEIT D I A+I A+GNEVEPYWPTLF+G  +K G  K++ L      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+GGGMDMFGGG
Sbjct:    1 MVLSKDQHDELCATYATLVLFDGEAEITSDAIAAVIKASGNEVEPYWPTLFAGLFSKDG--KIVDLISSGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLGGGMDMFGGG 113          
BLAST of mRNA_D-herbacea_F_contig105.551.1 vs. uniprot
Match: M4B8T5_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B8T5_HYAAE)

HSP 1 Score: 91.3 bits (225), Expect = 2.030e-21
Identity = 76/113 (67.26%), Postives = 92/113 (81.42%), Query Frame = 0
Query:    2 SISKEKHDELCTSYAALALYDGDAEITGDQINALITATGNEVEPYWPTLFSGFLAKAG--VEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFG 112
            +ISKE+HDELC SYA++ L+DG+ EIT + IN ++TA+GNEVEPYWPTLF+  L+K G  ++ +         XXXXXXXXXXXXXXXXXXXXXXXXXXXXX+DMGGGMDMFG
Sbjct:    4 TISKEQHDELCVSYASMMLFDGEHEITSEAINTIVTASGNEVEPYWPTLFASLLSKEGKILDLISSGGAASGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFG 116          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig105.551.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSD6_ECTSI4.770e-3593.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YXP2_9STRA2.370e-2980.3760s acidic ribosomal protein-domain-containing pro... [more]
F0WMR0_9STRA7.680e-2466.09Uncharacterized protein AlNc14C160G7746 n=2 Tax=Al... [more]
A0A8K1CSL3_PYTOL2.010e-2370.69Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W4G6T9_9STRA5.640e-2374.56Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
K3WS98_GLOUD4.510e-2272.81Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0P5M2D2_9CRUS4.770e-2270.43Putative 60S acidic ribosomal protein P1 n=1 Tax=D... [more]
A0A024UC28_9STRA9.840e-2268.97Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A2D4BHZ5_PYTIN1.820e-2170.43Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
M4B8T5_HYAAE2.030e-2167.26Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038716Ribosomal protein P1/P2, N-terminal domainGENE3D1.10.10.1410coord: 7..67
e-value: 9.8E-19
score: 68.9
NoneNo IPR availablePFAMPF00428Ribosomal_60scoord: 26..108
e-value: 2.8E-17
score: 63.1
NoneNo IPR availablePANTHERPTHR45696FAMILY NOT NAMEDcoord: 8..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig105contigD-herbacea_F_contig105:627701..629146 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig105.551.1mRNA_D-herbacea_F_contig105.551.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig105 627701..629146 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig105.551.1 ID=prot_D-herbacea_F_contig105.551.1|Name=mRNA_D-herbacea_F_contig105.551.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=117bp
MSISKEKHDELCTSYAALALYDGDAEITGDQINALITATGNEVEPYWPTL
FSGFLAKAGVEKLILAASSGGGGGGGGGGGGGGEAAAAEEEKKVEEEEEE
EIDMGGGMDMFGGGGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038716P1/P2_N_sf