mRNA_D-herbacea_F_contig105.551.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig105.551.1 vs. uniprot
Match: D8LSD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSD6_ECTSI) HSP 1 Score: 125 bits (315), Expect = 4.770e-35 Identity = 105/112 (93.75%), Postives = 108/112 (96.43%), Query Frame = 1
Query: 1 MSISKEKHDELCTSYAALALYDGDAEITGDQINALITATGNEVEPYWPTLFSGFLAKAGVEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-IDMGGGMDMF 333
MSISKE HDELCTSYAALALYDGDAEIT DQ++ALITATGNEVE YWPTLFSGFLAKAG+EKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IDMGGGMDMF
Sbjct: 1 MSISKELHDELCTSYAALALYDGDAEITSDQLSALITATGNEVEGYWPTLFSGFLAKAGIEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMF 112
BLAST of mRNA_D-herbacea_F_contig105.551.1 vs. uniprot
Match: A0A835YXP2_9STRA (60s acidic ribosomal protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXP2_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.370e-29 Identity = 86/107 (80.37%), Postives = 93/107 (86.92%), Query Frame = 1
Query: 22 HDELCTSYAALALYDGDAEITGDQINALITATGNEVEPYWPTLFSGFLAKAGVEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGG 342
HDELCTSYAALALYDG+AEIT +Q+ LI ATGNEVE YWPTLF+ +LAKAG+E LILA XXXXXXXXXXXXXXXXXXXXXXXXXXXX+DMGGGMDMFGGG
Sbjct: 5 HDELCTSYAALALYDGEAEITSEQLKTLIEATGNEVEAYWPTLFASYLAKAGIEDLILAVGSAPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGGG 111
BLAST of mRNA_D-herbacea_F_contig105.551.1 vs. uniprot
Match: F0WMR0_9STRA (Uncharacterized protein AlNc14C160G7746 n=2 Tax=Albugo TaxID=65356 RepID=F0WMR0_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 7.680e-24 Identity = 76/115 (66.09%), Postives = 92/115 (80.00%), Query Frame = 1
Query: 1 MSISKEKHDELCTSYAALALYDGDAEITGDQINALITATGNEVEPYWPTLFSGFLAKAG--VEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGG 339
M +SKE+HDELC SYA+L L+DG+AEIT D + ++ITA+GNEVEPYWPTLF+GFL+K G ++ + XXXXXXXXXXXXXXXXXXXXXXXXX +D+GGGMDMFGG
Sbjct: 1 MPLSKEQHDELCVSYASLILFDGEAEITSDALMSVITASGNEVEPYWPTLFAGFLSKEGRIMDLITSGGPSSGAXXXXXXXXXXXXXXXXXXXXXXXXXEEADMDLGGGMDMFGG 115
BLAST of mRNA_D-herbacea_F_contig105.551.1 vs. uniprot
Match: A0A8K1CSL3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSL3_PYTOL) HSP 1 Score: 96.3 bits (238), Expect = 2.010e-23 Identity = 82/116 (70.69%), Postives = 95/116 (81.90%), Query Frame = 1
Query: 1 MSISKEKHDELCTSYAALALYDGDAEITGDQINALITATGNEVEPYWPTLFSGFLAKAGVEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGGGK 348
M +SKE+HDELC SYA+L L+DG+AE+T D + +I A+GNEVEPYWPTLF+G L+K G + L L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+GGGMDMFGGGG
Sbjct: 1 MVLSKEQHDELCVSYASLILFDGEAELTSDALTTVIKASGNEVEPYWPTLFAGLLSKEG-KVLELISSGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLGGGMDMFGGGGS 115
BLAST of mRNA_D-herbacea_F_contig105.551.1 vs. uniprot
Match: W4G6T9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G6T9_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 5.640e-23 Identity = 85/114 (74.56%), Postives = 100/114 (87.72%), Query Frame = 1
Query: 1 MSISKEKHDELCTSYAALALYDGDAEITGDQINALITATGNEVEPYWPTLFSGFLAKAG-VEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGG 339
M+I+KE+HDEL SYAAL L+DGDAEIT + ++ +ITA+GNEVEPYWPTLF+G L+K G + +LI + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+GGGMDMFGG
Sbjct: 25 MAITKEQHDELAVSYAALVLFDGDAEITSEALSNVITASGNEVEPYWPTLFAGLLSKEGKLLELITSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADLGGGMDMFGG 138
BLAST of mRNA_D-herbacea_F_contig105.551.1 vs. uniprot
Match: K3WS98_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS98_GLOUD) HSP 1 Score: 92.8 bits (229), Expect = 4.510e-22 Identity = 83/114 (72.81%), Postives = 95/114 (83.33%), Query Frame = 1
Query: 1 MSISKEKHDELCTSYAALALYDGDAEITGDQINALITATGNEVEPYWPTLFSGFLAKAGVEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGG 342
MS+SKE+HDELC SYA+L L+DG+AEIT D I+A+I A+GNEV PYWPTLF+ LAK+ + L L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+G GMDMFGGG
Sbjct: 1 MSMSKEQHDELCVSYASLVLFDGEAEITSDAISAVIAASGNEVAPYWPTLFASLLAKSD-KVLELISSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEADLGAGMDMFGGG 113
BLAST of mRNA_D-herbacea_F_contig105.551.1 vs. uniprot
Match: A0A0P5M2D2_9CRUS (Putative 60S acidic ribosomal protein P1 n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5M2D2_9CRUS) HSP 1 Score: 92.8 bits (229), Expect = 4.770e-22 Identity = 81/115 (70.43%), Postives = 96/115 (83.48%), Query Frame = 1
Query: 1 MSISKEKHDELCTSYAALALYDGDAEITGDQINALITATGNEVEPYWPTLFSGFLAKAGVEKL-ILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGG 342
M+ISK +HDELC +YA LAL+DG+AEIT D I ALI A+GNEVEPYWP+LF+G L K+ + L +++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++GGGMDMFGGG
Sbjct: 1 MAISKAQHDELCVTYATLALFDGEAEITSDAIAALIKASGNEVEPYWPSLFAGLLGKSNKKILDLISSGGPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANIGGGMDMFGGG 115
BLAST of mRNA_D-herbacea_F_contig105.551.1 vs. uniprot
Match: A0A024UC28_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UC28_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 9.840e-22 Identity = 80/116 (68.97%), Postives = 95/116 (81.90%), Query Frame = 1
Query: 1 MSISKEKHDELCTSYAALALYDGDAEITGDQINALITATGNEVEPYWPTLFSGFLAKAG--VEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGG 342
M+I+KE+HDEL SYAAL L+DG+AEIT + ++ +I A+GNEVEPYWPTLF+G L+K G +E + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+GGGMDMFGGG
Sbjct: 1 MAITKEQHDELAVSYAALILFDGEAEITSEALSTVIAASGNEVEPYWPTLFAGLLSKDGKMLELITSGGAIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADLGGGMDMFGGG 116
BLAST of mRNA_D-herbacea_F_contig105.551.1 vs. uniprot
Match: A0A2D4BHZ5_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BHZ5_PYTIN) HSP 1 Score: 91.3 bits (225), Expect = 1.820e-21 Identity = 81/115 (70.43%), Postives = 94/115 (81.74%), Query Frame = 1
Query: 1 MSISKEKHDELCTSYAALALYDGDAEITGDQINALITATGNEVEPYWPTLFSGFLAKAGVEKLI-LAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGG 342
M +SK++HDELC +YA L L+DG+AEIT D I A+I A+GNEVEPYWPTLF+G +K G K++ L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+GGGMDMFGGG
Sbjct: 1 MVLSKDQHDELCATYATLVLFDGEAEITSDAIAAVIKASGNEVEPYWPTLFAGLFSKDG--KIVDLISSGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLGGGMDMFGGG 113
BLAST of mRNA_D-herbacea_F_contig105.551.1 vs. uniprot
Match: M4B8T5_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B8T5_HYAAE) HSP 1 Score: 91.3 bits (225), Expect = 2.030e-21 Identity = 76/113 (67.26%), Postives = 92/113 (81.42%), Query Frame = 1
Query: 4 SISKEKHDELCTSYAALALYDGDAEITGDQINALITATGNEVEPYWPTLFSGFLAKAG--VEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFG 336
+ISKE+HDELC SYA++ L+DG+ EIT + IN ++TA+GNEVEPYWPTLF+ L+K G ++ + XXXXXXXXXXXXXXXXXXXXXXXXXXXXX+DMGGGMDMFG
Sbjct: 4 TISKEQHDELCVSYASMMLFDGEHEITSEAINTIVTASGNEVEPYWPTLFASLLSKEGKILDLISSGGAASGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFG 116 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig105.551.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig105.551.1 >prot_D-herbacea_F_contig105.551.1 ID=prot_D-herbacea_F_contig105.551.1|Name=mRNA_D-herbacea_F_contig105.551.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=117bp MSISKEKHDELCTSYAALALYDGDAEITGDQINALITATGNEVEPYWPTLback to top mRNA from alignment at D-herbacea_F_contig105:627701..629146- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig105.551.1 ID=mRNA_D-herbacea_F_contig105.551.1|Name=mRNA_D-herbacea_F_contig105.551.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=1446bp|location=Sequence derived from alignment at D-herbacea_F_contig105:627701..629146- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig105:627701..629146- >mRNA_D-herbacea_F_contig105.551.1 ID=mRNA_D-herbacea_F_contig105.551.1|Name=mRNA_D-herbacea_F_contig105.551.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=702bp|location=Sequence derived from alignment at D-herbacea_F_contig105:627701..629146- (Desmarestia herbacea DmunF female)back to top |