prot_D-herbacea_F_contig105.547.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig105.547.1
Unique Nameprot_D-herbacea_F_contig105.547.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length1292
Homology
BLAST of mRNA_D-herbacea_F_contig105.547.1 vs. uniprot
Match: D7FZT6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZT6_ECTSI)

HSP 1 Score: 545 bits (1405), Expect = 1.200e-170
Identity = 679/1362 (49.85%), Postives = 722/1362 (53.01%), Query Frame = 0
Query:    1 MSRSARHANGGAHHGRGNSDVAKYRGACPASRSDTELLELVKKMGGDEDKIQSALDDWWQNDQGEWATATKKKKAPXHQRGGGGYGNGPGGFSNGGRGMDDRRGGRGGMGG--RGVRIDDXXXXXXXRDRGYFHNDGYRGXXXXXXXR---SAPPAGGRGXXXXXXXXXHAHGSWGGQSSXXXXXXWGGNRSSSIPPQAANSXXXXXXXXXXXXXXXXXXXXXGG-AWGGSGPTAAVTAADPAEVTESXXXXXXXXXXXXXXXVGGSAPTXXXXXXATRGDPSGGSXXXXXXXXXXXXXXXSGAATAP--SPMRGDGWASSVPDPVALTPVGGGAXXXXXTEED------------------AVAWAQSNLPATSAWSRGAATIINPKPKPLPAPXXXXVXXXXXXXXXXAVASPAHSAAAAVAQPDL-VVASPGREAVAVAVAATPPLTPRQAGSMPPVSEMAPSPVVASPA-GAQATSVMSSPSPVARPV-------------------------VAVAAAXXXXXVVQPAQAPEXXXXXXXXXXXXXXXVVSPSAQLHMQKAQXXXXXXXEVSKAAVSCVASVSGEGLKMGKWGLSDTIANDESFLSFGQLSFGVSDVRGTDDQTQ-TSASVGSSTGNGWGATSGASMGWGTKDTATSPVETQGSKPPGFSSAVTASPSVPVGAGPPPGLPPLGNVKQASVHELEAEMDSLNKPHSQFAQVPKVQSKLPAAQQPQQQQVPQVSHSQAPPRQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSHQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYN-KPQYSSSGVLPQQVGNNFYGSNTSGLSSAAKPAPGGVYSAPTPXXXXXXXXXXXXXXXXHGSSSHGSPGTTASKPLYGAQSAVSSGAGVSXXXXXXXXXXMQQGXXXXXXXXXXXXXXXXXXXQGYAPTPPGMPAQVGYQYNPSAQGGYGSIYYGQQGPVQSNPYQYGYPPHQYPPSANQYQ-GGGRQGFPNMPRGYPATDYGSQG-MGMGYGQMDYSASSQYGVPPNGNAYMGDVAKDQYGEFAQDQFGMPQQMGGQGSATAGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADKASGTPLSATGGGXXXXXXXXXXXXXXXXXXXXMNSHYGAG-------HSQGSRQAHGMYGGGQGS--VPQ-ADSQGAHGWQGQASGYQGHHTGNAGGWGGMMPQGGPXXXXXXXXXXXXXX---MQSQQYQYGSTGNG-EAWGNGR 1291
            MSRS RHANGG   G+GN+DVAKYR ACPASRSD+E++ELVKKMGGD+ KIQSAL+DWWQNDQGEWATAT      X              ++NG RGMDDRRGGRGGM    RG+R+D         DRG     GYRG XXXXXX    SAPPA    XXXXXXXXX           XXXXXX                XXXXXXXXXXXXX         G AW G GP A   A         XXXXXXXXXXXXXXX       XXXXXX          XXXXXXXXXXXXXXX         +PM  +GW+SS  DPVA  PVG G+                           A AWAQSNLPATSAWSRGAATIINPKPKP+P  XX   XXXXXXXXXX       +A      P L VVASPG EAVA    ATPP TPR  GSMP V+E A +   ASPA G+    V                                    VA A +     VV PA AP                     +QLH+QKAQ        VSK   +  AS  GEGLKMGKWGLSDTIANDESFLSFGQLSFGV DV G + Q+Q TS SVG+S GNGWGATSG++MGWGTKDTATSPVET G+KPPGFSS VTASPSVPVGAGPPPGLPPLGNVKQ  VHELEAEMDSLNKPHSQF+QV K QSKLPAAQQPQ Q           P ++                                                            QG                                                                                    YN KPQYS+SG LPQQ                                                                             XXXX XXXXX    XXXXXXXXXXXXXXXXXXXQGYAPTPPGMPAQVGYQY PS Q  YGSIYYGQQGPVQSNPYQYGYPPHQYPPSA+QYQ GGG Q FPNMPRGYPAT+YGSQG MGMGYGQMDYSASSQYGVPPNGN YM DV K+QYG+F QDQFGMPQQM GQG                         XXXXXXXXXXXXXXXXXXXX     A         +    XXXXXXXXXXXXXXXXXXXX+NSHY          +SQGSRQA GM         VPQ  DSQG HGWQGQ S Y GHHT NAG           XXXXXXXXXXXXXX   MQSQQY YGSTGNG ++WGNGR
Sbjct:    1 MSRSQRHANGG---GKGNADVAKYRDACPASRSDSEIVELVKKMGGDQAKIQSALEDWWQNDQGEWATATXXXXXXXXXXXXXXXXXXXXXYANG-RGMDDRRGGRGGMADKMRGLRLDG--------DRG-----GYRGGXXXXXXXXXXSAPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASAKAPAAGSAWTGDGPAAVSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPMAHNGWSSSAQDPVAPGPVGSGSGSLGGXXXXXXXXXXXXXXXXXXXXXXAAAWAQSNLPATSAWSRGAATIINPKPKPVPVXXXVAXXXXXXXXXXXXXXXXXXAA-----HPTLPVVASPGGEAVA----ATPPQTPRPQGSMPSVAETAAA-AAASPAIGSXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAAPSPVTAAVVTPATAP--------------------GSQLHLQKAQAQEASA--VSKPTAATGASAPGEGLKMGKWGLSDTIANDESFLSFGQLSFGVPDVGGPESQSQQTSTSVGTSAGNGWGATSGSAMGWGTKDTATSPVETPGTKPPGFSSTVTASPSVPVGAGPPPGLPPLGNVKQ--VHELEAEMDSLNKPHSQFSQVSKAQSKLPAAQQPQVQXXXXXXXXXXRPARQ------------------------------------------------------------QGGRGG--------------------------------------------------------------------------------YNSKPQYSNSGSLPQQX--------------------------------------------------------------------XXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGYAPTPPGMPAQVGYQYTPSGQA-YGSIYYGQQGPVQSNPYQYGYPPHQYPPSASQYQQGGGGQRFPNMPRGYPATEYGSQGGMGMGYGQMDYSASSQYGVPPNGNGYMSDVGKEQYGDFGQDQFGMPQQMSGQGGXXX---------------------XXXXXXXXXXXXXXXXXXXXGVLAEASLTRFPRARSFSAXXXXXXXXXXXXXXXXXXXXXVNSHYXXXXXXXXXXNSQGSRQAQGMXXXXXXXXXVPQQGDSQGGHGWQGQGSAYPGHHTSNAGXXXXXXXXXXXXXXXXXXXXXXXXXXXSMQSQQYGYGSTGNGGDSWGNGR 1081          
BLAST of mRNA_D-herbacea_F_contig105.547.1 vs. uniprot
Match: A0A7S3XQ19_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ19_HETAK)

HSP 1 Score: 65.5 bits (158), Expect = 6.130e-7
Identity = 27/60 (45.00%), Postives = 42/60 (70.00%), Query Frame = 0
Query:   20 DVAKYRGACPASRSDTELLELVKKMGGDEDKIQSALDDWWQNDQGE---WATATKKKKAP 76
            ++ KYR  CP SR+D E+  L++ +GG+EDKIQ A+ +WW++D+ +   WA  + KKK P
Sbjct:   52 EIRKYRAICPESRTDDEIHNLIQLLGGEEDKIQQAISEWWEDDRQQADAWAPVSTKKKKP 111          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig105.547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZT6_ECTSI1.200e-17049.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3XQ19_HETAK6.130e-745.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig105contigD-herbacea_F_contig105:527612..550115 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig105.547.1mRNA_D-herbacea_F_contig105.547.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig105 527356..550115 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig105.547.1 ID=prot_D-herbacea_F_contig105.547.1|Name=mRNA_D-herbacea_F_contig105.547.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=1292bp
MSRSARHANGGAHHGRGNSDVAKYRGACPASRSDTELLELVKKMGGDEDK
IQSALDDWWQNDQGEWATATKKKKAPPHQRGGGGYGNGPGGFSNGGRGMD
DRRGGRGGMGGRGVRIDDRGGGGGDRDRGYFHNDGYRGGGGRGRGRSAPP
AGGRGGGGGRGGGGHAHGSWGGQSSGGGDGAWGGNRSSSIPPQAANSSGD
SGGWGATQSSSPEPSSSSGGAWGGSGPTAAVTAADPAEVTESSPTQPVSS
GGGWAAAVGGSAPTSSPNASATRGDPSGGSGGGGWGGTGGGAGNSSGAAT
APSPMRGDGWASSVPDPVALTPVGGGAASPPPTEEDAVAWAQSNLPATSA
WSRGAATIINPKPKPLPAPPAPVVPPPAPVAAPVAVASPAHSAAAAVAQP
DLVVASPGREAVAVAVAATPPLTPRQAGSMPPVSEMAPSPVVASPAGAQA
TSVMSSPSPVARPVVAVAAAVAAAAVVQPAQAPEAAPSPVAPPQAAATAV
VSPSAQLHMQKAQQQQQQQKEVSKAAVSCVASVSGEGLKMGKWGLSDTIA
NDESFLSFGQLSFGVSDVRGTDDQTQTSASVGSSTGNGWGATSGASMGWG
TKDTATSPVETQGSKPPGFSSAVTASPSVPVGAGPPPGLPPLGNVKQASV
HELEAEMDSLNKPHSQFAQVPKVQSKLPAAQQPQQQQVPQVSHSQAPPRQ
RATTRDVPPPQQQQQQRQQQQPQAQSPAPAQQQAAQPPAPSQQPPPPQQQ
QQQTPQSSLSHQGAQAQQTQAQAQQQQQASSVSTAPPVPQQQQQQQHQSQ
QHHQSQQQQHGQQHGQQQQPSHQASQVHHHTSSHHQMSQRQQGGRGGYNK
PQYSSSGVLPQQVGNNFYGSNTSGLSSAAKPAPGGVYSAPTPPAAHSAGG
GGGGGGGAHGSSSHGSPGTTASKPLYGAQSAVSSGAGVSGAGGPGGMGGM
QQGGQQQQPQQAPPPQQQQQQQQGYAPTPPGMPAQVGYQYNPSAQGGYGS
IYYGQQGPVQSNPYQYGYPPHQYPPSANQYQGGGRQGFPNMPRGYPATDY
GSQGMGMGYGQMDYSASSQYGVPPNGNAYMGDVAKDQYGEFAQDQFGMPQ
QMGGQGSATAGAGASSAGAGGGSGGGVGGAGGGGGGGGPGGSSSSSSAAV
SGVGGGADKASGTPLSATGGGGGAGGGAGGAGGAGAGGAGGMNSHYGAGH
SQGSRQAHGMYGGGQGSVPQADSQGAHGWQGQASGYQGHHTGNAGGWGGM
MPQGGPQHHYQQSPPPPGGGMQSQQYQYGSTGNGEAWGNGR*
back to top