prot_D-herbacea_F_contig1049.515.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1049.515.1
Unique Nameprot_D-herbacea_F_contig1049.515.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length127
Homology
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BLAST of mRNA_D-herbacea_F_contig1049.515.1 vs. uniprot
Match: A0A6H5KGH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGH8_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 5.660e-14
Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 0 
Query:   74 GGPDLGPWGLPWFWWPIFVLVVPYIILATIGILVIKQAAA-CTTDATGGDQT 124
            GGP +GPWGLPWF WPIFVL++PY+IL TIG++VI+ A   CTT+  GG  T
Sbjct:   58 GGPAMGPWGLPWFCWPIFVLLIPYVILVTIGVMVIQYALPWCTTETAGGRVT 109
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1049.515.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KGH8_9PHAE5.660e-1463.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 109..126
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..84
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..108
NoneNo IPR availableTMHMMTMhelixcoord: 86..108
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1049contigD-herbacea_F_contig1049:65099..65555 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1049.515.1mRNA_D-herbacea_F_contig1049.515.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1049 65099..65555 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1049.515.1 ID=prot_D-herbacea_F_contig1049.515.1|Name=mRNA_D-herbacea_F_contig1049.515.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=127bp
MSGPGGGGGFGGGGGGFGGGGGFGGGGGGFGGGGGGFGGGGGGFGGGGDG
WGRGGGGFGGGGGGRFRLVAVLLGGPDLGPWGLPWFWWPIFVLVVPYIIL
ATIGILVIKQAAACTTDATGGDQTVK*
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