prot_D-herbacea_F_contig104.454.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig104.454.1
Unique Nameprot_D-herbacea_F_contig104.454.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length480
Homology
BLAST of mRNA_D-herbacea_F_contig104.454.1 vs. uniprot
Match: D7G0B9_ECTSI (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0B9_ECTSI)

HSP 1 Score: 813 bits (2099), Expect = 3.340e-295
Identity = 424/480 (88.33%), Postives = 443/480 (92.29%), Query Frame = 0
Query:    1 MASLRVVAGCARALRHPSRALARTS-FLSGKPLVAAGGAGQQVRRLNVHEYVSMKLMEEHDIDIPASIMAETPEDAEKACAEIMGTSGMKDVVIKAQVLSGGRGRGHFSNGFKSGVHMCLKPEDAKHYASEMLGQKLITKQTGEDGLPCDKACLSGRGGGGDGGVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAETNPELILKEEVDVMVGLTDAQASKIAQHLKLSVDGPSYEAGKTLLKNMYSMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQGKTFEFRDYTQEDTREASDAVEAAKYDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEQQVQKAFELLNADPKVATILVNIFGGIMRCDVIATGVINAAKSIGMKKPIVIRLQGTNVEQANELIANCGFKMIISNDLEDAAEKAVAVAEIYSQATKVGIDVELQTATA 479
            MAS+RVVAGCARALR+P   +AR S  LSGKP+ A GGAGQQVRRLNVHEYVSM++M EHDIDIPAS MAETPEDAEKACAEIMG + MKDVVIKAQVLSGGRGRGHF NGF+SGVHMCLKP DAKHYASEMLGQKLITKQTGEDGLPCDK             VLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAE+NPELI+KEEVD+M GLTDAQA KIA+HLKLS DGPSYEAGKTLLKNMY+MFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQ  TF+FRDYTQEDTRE    VEAAKYDLNYIGL+GNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATE+QVQKAFELLNADPKVATILVNIFGGIMRCDVIA+GVINAAKSIGMKKPIVIRLQGTNVEQANELIAN GFKMIISNDL+DAAEKAVAVAEIYSQATKVGIDVELQTA+A
Sbjct:    1 MASMRVVAGCARALRNPRGLVARNSPLLSGKPISATGGAGQQVRRLNVHEYVSMQIMAEHDIDIPASKMAETPEDAEKACAEIMGGNAMKDVVIKAQVLSGGRGRGHFDNGFESGVHMCLKPSDAKHYASEMLGQKLITKQTGEDGLPCDK-------------VLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEHLKLSSDGPSYEAGKTLLKNMYAMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQKDTFQFRDYTQEDTRE----VEAAKYDLNYIGLTGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEEQVQKAFELLNADPKVATILVNIFGGIMRCDVIASGVINAAKSIGMKKPIVIRLQGTNVEQANELIANSGFKMIISNDLDDAAEKAVAVAEIYSQATKVGIDVELQTASA 463          
BLAST of mRNA_D-herbacea_F_contig104.454.1 vs. uniprot
Match: A0A835YQF4_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF4_9STRA)

HSP 1 Score: 570 bits (1469), Expect = 1.730e-199
Identity = 297/446 (66.59%), Postives = 352/446 (78.92%), Query Frame = 0
Query:   36 GGAGQQVRRLNVHEYVSMKLMEEHDIDIPASIMAETPEDAEKACAEIM---GTSGMK-DVVIKAQVLSGGRGRGHFSNGFKSGVHMCLKPEDAKHYASEMLGQKLITKQTGEDGLPCDKACLSGRGGGGDGGVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAETNPELILKEEVDVMVGLTDAQASKIAQHLKLSVDGPSYEAGKTLLKNMYSMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQGKTFEFRDYTQEDTREASDAVEAAKYDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEQQVQKAFELLNADPKVATILVNIFGGIMRCDVIATGVINAAKSIGMKKPIVIRLQGTNVEQANELIANCGFKMIISNDLEDAAEKAVAVAEIYSQATKVGIDVELQTA 477
            G A  Q R LNVHEYVSMK++  H++  P SIMA +PE+AE AC EIM   G  GMK DVVIKAQVLSGGRG GHF NGFK GVHMC  P +A+ YA +MLG KLITKQTG  GLPC K             VLLMER+YMRREMYLSIMMDR  +GPV+VAC  GGTSIEDLAE +PEL++K  V +  GLT+ QA KIA+HL+L    P+Y+ G T+LKN+Y MFI++DCTLVE+NPLAETP+GRV+ACDAKLNFDDNA +RQ   F  RDY+QED RE    VEAAKYDLNYIGL+GNIGCMVNGAGLAM+TMDIIKLKGGDPANFLDVGGGATE QVQKA ELL+AD  V  I++NIFGGIMRCD+IA+GV+NA K++G+KKPI++RLQGTNV+QA ++IA+  FKMI++++LEDAAEKAVAVA +   A   G++V  + A
Sbjct:   27 GAAACQARLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHK-------------VLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPRE----VEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFEIA 455          
BLAST of mRNA_D-herbacea_F_contig104.454.1 vs. uniprot
Match: A0A067CEF9_SAPPC (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CEF9_SAPPC)

HSP 1 Score: 528 bits (1361), Expect = 2.360e-183
Identity = 281/445 (63.15%), Postives = 336/445 (75.51%), Query Frame = 0
Query:   31 PLVAAGGAGQQVRRLNVHEYVSMKLMEEHDIDIPASIMAETPEDAEKACAEIMGTSGMKDVVIKAQVLSGGRGRGHFSNGFKSGVHMCLKPEDAKHYASEMLGQKLITKQTGEDGLPCDKACLSGRGGGGDGGVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAETNPELILKEEVDVMVGLTDAQASKIAQHLKLSVDGPSYEAGKTLLKNMYSMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQGKTFEFRDYTQEDTREASDAVEAAKYDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEQQVQKAFELLNADPKVATILVNIFGGIMRCDVIATGVINAAKSIGMKKPIVIRLQGTNVEQANELIANCGFKMIISNDLEDAAEKAVAVAEIYSQATKVGIDVELQ 475
            PL+ A   GQQVRRLN+HEY SM++M+   + IPAS+ A TP +AE A   + G    KDVVIKAQ L+GGRG GHF NGFK GVHMC KPEDAK++A +MLG+ L+TKQTGE G+   K             V LMER+YMRREMY SI+MDR S GPV+VA P GGTSIED+A   PELI KE V++  G T  Q +++A ++ LS  G S + G  L+ N+Y+MFI  D TLVEINPLAETPEG V ACDAK+NFDDNA +R    F  RD TQED RE    VEA+ YDLNYIGL GNIGC+VNGAGLAM+TMDII L GG PANFLDVGGGATE QV+KAFE+LNADP+V +ILVNIFGGIMRCDVIA GVI AAK +GMKKPIVIRLQGTNVE+A +LI N GF+MI++NDL+DAA+KAV +A+I +QA +V ++V  +
Sbjct:   12 PLLRA--PGQQVRRLNLHEYQSMEIMKSFGVAIPASLHATTPAEAEAAYNTLKGGDATKDVVIKAQALTGGRGLGHFKNGFKGGVHMCTKPEDAKNFAEKMLGETLVTKQTGEKGIEVAK-------------VFLMERVYMRREMYFSILMDRASNGPVLVASPAGGTSIEDVAHATPELIFKEAVNITTGPTSEQLNRLAANMGLS--GESQKRGVELMNNLYNMFIGTDATLVEINPLAETPEGNVYACDAKINFDDNASFRHKDIFAKRDKTQEDPRE----VEASAYDLNYIGLDGNIGCLVNGAGLAMATMDIISLFGGSPANFLDVGGGATESQVKKAFEILNADPQVKSILVNIFGGIMRCDVIAAGVIAAAKDLGMKKPIVIRLQGTNVEKARQLIENSGFRMIVANDLDDAAQKAVKIADIVAQAEEVHVNVSFE 435          
BLAST of mRNA_D-herbacea_F_contig104.454.1 vs. uniprot
Match: A0A6T6HZE5_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6HZE5_9STRA)

HSP 1 Score: 528 bits (1359), Expect = 6.520e-183
Identity = 283/454 (62.33%), Postives = 339/454 (74.67%), Query Frame = 0
Query:   24 TSFLSGKPL--VAAGGAGQQVRRLNVHEYVSMKLMEEHDIDIPASIMAETPEDAEKACAEIMGTSG--MKDVVIKAQVLSGGRGRGHFSNGFKSGVHMCLKPEDAKHYASEMLGQKLITKQTGEDGLPCDKACLSGRGGGGDGGVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAETNPELILKEEVDVMVGLTDAQASKIAQHLKLSVDGPSYEAGKTLLKNMYSMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQGKTFEFRDYTQEDTREASDAVEAAKYDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEQQVQKAFELLNADPKVATILVNIFGGIMRCDVIATGVINAAKSIGMKKPIVIRLQGTNVEQANELIANCGFKMIISNDLEDAAEKAVAVAEIYSQATKVGIDVE 473
            TS L  K L   AA   G  +R LNVHEY+SM+LM  H I  PA  +A TP++AE     I+   G  +KD VIKAQVLSGGRG G F NGFK GV M  KP  AK +A+ MLG++L+TKQ   +G+ C+K             V LMERMYMRREMYLSI+MDR SQGP++V  P GGT+IED+A++NPE+I  E +D++ G+   Q  ++A +L L    PS+E   TL+KN+YSMF + DCT VE+NPLAETPEG V+ CDAK+NFD NAE+RQ   F+ RD+TQED+RE    VEA+KYDLNYIGL GNIGCMVNGAGLAMSTMDII+LKGG PANFLDVGGGATE QVQKAFE+LNADP V  ILVNIFGGIMRCDVIA+G+INAAK IG++KPIVIRLQGTNV +A  +I  CGFKMII+ DLEDAAEKAV VAEI +QA K+ + V+
Sbjct:    7 TSVLGRKALQRTAAPAVGA-IRNLNVHEYLSMELMNAHQIATPAGHVASTPDEAEHIFQNILNKPGEPLKDAVIKAQVLSGGRGLGTFKNGFKGGVQMVTKPGQAKDFAASMLGEELVTKQA-PNGIICNK-------------VFLMERMYMRREMYLSILMDRASQGPLLVGSPRGGTAIEDIAKSNPEVIFTEPIDIVEGIQQDQCERMATNLGLEAGSPSHENAITLMKNLYSMFTQCDCTQVEVNPLAETPEGDVVVCDAKVNFDSNAEYRQSSIFDKRDFTQEDSRE----VEASKYDLNYIGLDGNIGCMVNGAGLAMSTMDIIQLKGGAPANFLDVGGGATEDQVQKAFEILNADPNVHAILVNIFGGIMRCDVIASGIINAAKEIGIRKPIVIRLQGTNVNEAKTMIEGCGFKMIIAEDLEDAAEKAVGVAEIVAQADKIQVGVK 441          
BLAST of mRNA_D-herbacea_F_contig104.454.1 vs. uniprot
Match: A0A024T9H2_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T9H2_9STRA)

HSP 1 Score: 526 bits (1354), Expect = 2.540e-182
Identity = 278/451 (61.64%), Postives = 339/451 (75.17%), Query Frame = 0
Query:   25 SFLSGKPLVAAGGAGQQVRRLNVHEYVSMKLMEEHDIDIPASIMAETPEDAEKACAEIMGTSGMKDVVIKAQVLSGGRGRGHFSNGFKSGVHMCLKPEDAKHYASEMLGQKLITKQTGEDGLPCDKACLSGRGGGGDGGVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAETNPELILKEEVDVMVGLTDAQASKIAQHLKLSVDGPSYEAGKTLLKNMYSMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQGKTFEFRDYTQEDTREASDAVEAAKYDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEQQVQKAFELLNADPKVATILVNIFGGIMRCDVIATGVINAAKSIGMKKPIVIRLQGTNVEQANELIANCGFKMIISNDLEDAAEKAVAVAEIYSQATKVGIDVELQ 475
            S +   PL+     GQQVRRLN+HEY SMK+M+ + + IPAS  A+TPE A +   ++ G +  KDVVIKAQ L+GGRG GHF NGFK GVHMC K EDAK +A +M+G+ L+TKQTG  G+   K             V LMER+Y+RREMY SI+MDR SQGPV+V  P GGTSIED+A   PELI KE VD+M G T+ Q +++A+++ L  DGP+   G  LL N+Y MFI  D T VEINPLAETPEG+V ACDAK+NFDDNA +RQ + F  RD TQED RE    VEA+ YDLNYIGL GNIGC+VNGAGLAM+TMDII+L GG PANFLDVGGGATE QV+KAFE+LNAD +V +ILVNIFGGIMRCDVIA G+I AAK +GMKKPIVIRLQGTNVE+A  LI N GF+MI++NDL+DAA+KAV +A+I +QA +V ++V  +
Sbjct:    4 SIIKATPLLRP--TGQQVRRLNLHEYQSMKIMQSYGVAIPASEAADTPEQAVQVYNKLKGGNDTKDVVIKAQALTGGRGLGHFKNGFKGGVHMCTKAEDAKKFAQKMIGETLVTKQTGVKGIEVAK-------------VFLMERVYLRREMYFSILMDRASQGPVLVGSPAGGTSIEDVAHNTPELIFKEHVDIMTGPTNEQLTRLAKNMGL--DGPALPRGVELLGNLYKMFIGVDATQVEINPLAETPEGQVFACDAKINFDDNAAFRQAEIFAQRDKTQEDARE----VEASAYDLNYIGLDGNIGCLVNGAGLAMATMDIIQLFGGSPANFLDVGGGATEAQVKKAFEILNADNQVKSILVNIFGGIMRCDVIAAGIIAAAKDLGMKKPIVIRLQGTNVEKARALIENSGFRMIVANDLDDAAQKAVKIADIVTQAEEVHVNVSFE 433          
BLAST of mRNA_D-herbacea_F_contig104.454.1 vs. uniprot
Match: A0A485KYE4_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485KYE4_9STRA)

HSP 1 Score: 525 bits (1351), Expect = 7.490e-182
Identity = 277/437 (63.39%), Postives = 331/437 (75.74%), Query Frame = 0
Query:   39 GQQVRRLNVHEYVSMKLMEEHDIDIPASIMAETPEDAEKACAEIMGTSGMKDVVIKAQVLSGGRGRGHFSNGFKSGVHMCLKPEDAKHYASEMLGQKLITKQTGEDGLPCDKACLSGRGGGGDGGVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAETNPELILKEEVDVMVGLTDAQASKIAQHLKLSVDGPSYEAGKTLLKNMYSMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQGKTFEFRDYTQEDTREASDAVEAAKYDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEQQVQKAFELLNADPKVATILVNIFGGIMRCDVIATGVINAAKSIGMKKPIVIRLQGTNVEQANELIANCGFKMIISNDLEDAAEKAVAVAEIYSQATKVGIDVELQ 475
            GQQVRRLN+HEY SM++M+ + + IPAS  A TPE+A     ++ G    KDVVIKAQ L+GGRG GHF NGFK GVHMC K EDAK +A +M+G+ L+TKQTGE G+   K             V LMER+YMRREMY SI+MDR SQGPV+VA P GGTSIED+A   PELI KE +D+M G TD Q  ++A ++ L  +G S   G  LL N+Y MFI  D TLVEINPLAETP+G+V ACDAK+NFDDNA +RQ   F  RD TQED RE    VEA+ YDLNYIGL GNIGC+VNGAGLAM+TMDII+L GG PANFLDVGGGATE QV+KAFE+LNAD +V +ILVNIFGGIMRCDVIA G+I AAK +GMKKPIVIRLQGTNVE+A  LI N GF+MI++NDL+DAA+KAV +A+I SQA +V ++V  +
Sbjct:   17 GQQVRRLNLHEYQSMQIMQSYGVAIPASQHANTPEEAVNVYNKLKGGDEGKDVVIKAQALTGGRGLGHFKNGFKGGVHMCTKAEDAKTFAQKMIGETLVTKQTGEKGIEVAK-------------VFLMERVYMRREMYFSILMDRASQGPVMVASPAGGTSIEDVAHATPELIFKENIDIMTGPTDEQLKRLASNMGL--EGVSLTRGVELLGNLYKMFIGVDATLVEINPLAETPDGKVFACDAKINFDDNAAFRQKDIFAKRDKTQEDARE----VEASAYDLNYIGLDGNIGCLVNGAGLAMATMDIIQLFGGSPANFLDVGGGATESQVKKAFEILNADTQVKSILVNIFGGIMRCDVIAAGIIAAAKELGMKKPIVIRLQGTNVEKARALIENSGFRMIVANDLDDAAQKAVKIADIVSQAEEVHVNVSFE 434          
BLAST of mRNA_D-herbacea_F_contig104.454.1 vs. uniprot
Match: A0A7S3XRL5_HETAK (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRL5_HETAK)

HSP 1 Score: 514 bits (1325), Expect = 2.130e-178
Identity = 267/422 (63.27%), Postives = 327/422 (77.49%), Query Frame = 0
Query:   56 MEEHDIDIPASIMAETPEDAEKACAEIMGTSGMKDVVIKAQVLSGGRGRGHFSNGFKSGVHMCLKPEDAKHYASEMLGQKLITKQTGEDGLPCDKACLSGRGGGGDGGVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAETNPELILKEEVDVMVGLTDAQASKIAQHLKLSVDGPSYEAGKTLLKNMYSMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQGKTFEFRDYTQEDTREASDAVEAAKYDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEQQVQKAFELLNADPKVATILVNIFGGIMRCDVIATGVINAAKSIGMKKPIVIRLQGTNVEQANELIANCGFKMIISNDLEDAAEKAVAVAEIYSQATKVGIDVELQTA 477
            M ++ +  P + +A TP++AE    ++      KDVVIKAQVL+GGRG G F++GFK GVHMC +P  AK YA +MLG  L+TKQT  +G+ C K             V LMER+YMRREMYLS+M+DRG+QGP++VA P GGTSIED+AE  PELI  + +D+M GLTDAQASK+A +L +    PS+     L+KN+Y+MFIE D T VEINPLAET  G VM  DAKLNFDDNAE+RQ +   +RD+TQED RE    VEAAK+DLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATE QVQKAFE+LNADPKV++ILVNIFGGIMRCD+IA G+INAAK IG+ KPI+IRL+GTNVEQAN LIA+ G+KM + +DLEDAAEKAV+++ I ++A K+G+ V  ++A
Sbjct:    1 MAKYGVKTPPAQVATTPDEAESIYQKMTAGDPNKDVVIKAQVLAGGRGLGTFTSGFKGGVHMCTRPGQAKDYAEKMLGNYLVTKQTTAEGVLCSK-------------VFLMERVYMRREMYLSLMLDRGTQGPLMVASPCGGTSIEDVAEQTPELIFTQPIDIMEGLTDAQASKMATNLGMVEGSPSHSDAIALMKNLYTMFIETDATQVEINPLAETSTGEVMCADAKLNFDDNAEFRQKEVHAYRDFTQEDPRE----VEAAKFDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEGQVQKAFEILNADPKVSSILVNIFGGIMRCDIIAGGIINAAKEIGLGKPIIIRLEGTNVEQANRLIADSGYKMTVCDDLEDAAEKAVSISNIMAEANKIGVKVSFESA 405          
BLAST of mRNA_D-herbacea_F_contig104.454.1 vs. uniprot
Match: B7FXA2_PHATC (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXA2_PHATC)

HSP 1 Score: 511 bits (1316), Expect = 1.890e-176
Identity = 269/436 (61.70%), Postives = 324/436 (74.31%), Query Frame = 0
Query:   42 VRRLNVHEYVSMKLMEEHDIDIPASIMAETPEDAEKACAEIMGTSGM--KDVVIKAQVLSGGRGRGHFSNGFKSGVHMCLKPEDAKHYASEMLGQKLITKQTGEDGLPCDKACLSGRGGGGDGGVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAETNPELILKEEVDVMVGLTDAQASKIAQHLKLSVDGPSYEAGKTLLKNMYSMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQGKTFEFRDYTQEDTREASDAVEAAKYDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEQQVQKAFELLNADPKVATILVNIFGGIMRCDVIATGVINAAKSIGMKKPIVIRLQGTNVEQANELIANCGFKMIISNDLEDAAEKAVAVAEIYSQATKVGIDVELQ 475
            VR LNVHEY+SM++M+ H I  P   +A  PE+AE      +   G   KD+VIKAQVLSGGRG G F NGFK GVHM  KP  A+ +A+ MLG +L+TKQ   +G+ C+K             VLLMERMYMRREMYLSI+MDRGSQGP++VA P GGTSIED+A TNPE+I  + +D+  GLT   A ++A +L L      ++    L++N+YSMFI  DCT VE+NPLAETPEG ++ CDAK+NFDDNAE+RQ   F  RD +QED RE    V+A+KYDLNYIGL G IGCMVNGAGLAMSTMDII+LKGG PANFLDVGGGA E QVQKAFE+LN+D +V  ILVNIFGGIMRCDVIATG+INAAK IG+ KPIVIRLQGTNV +A  LI  CGF+MI++ DLEDAAEKAV VAEI +QA K+ + V+ +
Sbjct:   22 VRNLNVHEYISMEIMKNHGIQTPECYVASNPEEAENIFLNSLNRPGAPKKDIVIKAQVLSGGRGLGTFKNGFKGGVHMVTKPGQAREFAAAMLGNELVTKQA-PNGIVCNK-------------VLLMERMYMRREMYLSILMDRGSQGPLLVASPRGGTSIEDVAATNPEVIFTQPIDITEGLTPEGAHRMASNLGLEEGSTGHDKAVILMQNLYSMFIACDCTQVEVNPLAETPEGDIVVCDAKVNFDDNAEFRQSSIFARRDTSQEDVRE----VDASKYDLNYIGLEGTIGCMVNGAGLAMSTMDIIQLKGGSPANFLDVGGGANETQVQKAFEILNSDSQVKAILVNIFGGIMRCDVIATGIINAAKEIGINKPIVIRLQGTNVNEAKTLIEGCGFRMILAEDLEDAAEKAVGVAEIAAQAEKIQVGVKFE 439          
BLAST of mRNA_D-herbacea_F_contig104.454.1 vs. uniprot
Match: A0A1Z5K8M0_FISSO (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8M0_FISSO)

HSP 1 Score: 510 bits (1313), Expect = 5.580e-176
Identity = 270/436 (61.93%), Postives = 328/436 (75.23%), Query Frame = 0
Query:   42 VRRLNVHEYVSMKLMEEHDIDIPASIMAETPEDAEKACAEIMGTSG--MKDVVIKAQVLSGGRGRGHFSNGFKSGVHMCLKPEDAKHYASEMLGQKLITKQTGEDGLPCDKACLSGRGGGGDGGVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAETNPELILKEEVDVMVGLTDAQASKIAQHLKLSVDGPSYEAGKTLLKNMYSMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQGKTFEFRDYTQEDTREASDAVEAAKYDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEQQVQKAFELLNADPKVATILVNIFGGIMRCDVIATGVINAAKSIGMKKPIVIRLQGTNVEQANELIANCGFKMIISNDLEDAAEKAVAVAEIYSQATKVGIDVELQ 475
            VR LNVHEYVSM++M+ H I  P   +A TPE+AE+     +   G  ++DVVIKAQVLSGGRG GHF +GFK GVHM  K   A+ +A  MLG++L+TKQ   +G+ C+K             VLLMERMYMR EMYLSI+MDR SQGP++VA P GGTSIED+A TNPE+I  + +D+ VGLTD QA ++A +L L      +    TL+KN+Y+MFI  DCT VE+NPLAETP G ++ CDAK+NFDDNAE+RQ   F  RD TQED RE    V A++YDLNYIGL GNIGCMVNGAGLAMSTMDII+LKGG PANFLDVGGGA+EQQVQKAFE+LNADPKV  ILVNIFGGIMRCDVIA G++NA K IG+ KPIVIRLQGTNV++A  LI    ++MI+++DLE AAEKAV VAEI +QA K+ +DV+ +
Sbjct:   22 VRHLNVHEYVSMEIMQAHGIKTPNCSVASTPEEAEQIFVHKLNKPGTPLQDVVIKAQVLSGGRGLGHFKSGFKGGVHMVTKAGQARDFAKSMLGEELVTKQA-PNGIICNK-------------VLLMERMYMRNEMYLSILMDRASQGPLMVASPRGGTSIEDVAATNPEVIFTQPIDITVGLTDEQAQRMAGNLGLEPGSEGHAQAVTLMKNLYNMFIACDCTQVEVNPLAETPSGDIVVCDAKVNFDDNAEFRQTGIFARRDTTQEDPRE----VAASEYDLNYIGLDGNIGCMVNGAGLAMSTMDIIQLKGGSPANFLDVGGGASEQQVQKAFEILNADPKVKAILVNIFGGIMRCDVIANGILNAVKEIGISKPIVIRLQGTNVDKAKTLIEGSPYRMILADDLEAAAEKAVGVAEIVAQAEKIEVDVKFE 439          
BLAST of mRNA_D-herbacea_F_contig104.454.1 vs. uniprot
Match: B8BS06_THAPS (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BS06_THAPS)

HSP 1 Score: 507 bits (1305), Expect = 3.790e-175
Identity = 269/434 (61.98%), Postives = 324/434 (74.65%), Query Frame = 0
Query:   42 VRRLNVHEYVSMKLMEEHDIDIPASIMAETPEDAEKACAEIMGTSGMKDVVIKAQVLSGGRGRGHFSNGFKSGVHMCLKPEDAKHYASEMLGQKLITKQTGEDGLPCDKACLSGRGGGGDGGVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAETNPELILKEEVDVMVGLTDAQASKIAQHLKLSVDGPSYEAGKTLLKNMYSMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQGKTFEFRDYTQEDTREASDAVEAAKYDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEQQVQKAFELLNADPKVATILVNIFGGIMRCDVIATGVINAAKSIGMKKPIVIRLQGTNVEQANELIANCGFKMIISNDLEDAAEKAVAVAEIYSQATKVGIDVELQ 475
            VR LNVHEY+SM++M +H I  P + +A +PE+AE     +M     K VVIKAQVLSGGRG G F NGFK GVHM  +   A   AS MLGQ+L+TKQ   +G+ C K             VLLMERMYMR EMYLSI+MDR S GP++V  P GGTSIED+A +NPELI  E +D+ VGLT   A+++A+++ L     S+    TL+ N+Y MF+  DCT VE+NPLAETPEG V+ CDAK+NFDDNAE+RQ   FE RD++QED RE    VEA+KYDLNYIGL GNIGCMVNGAGLAMSTMDII+LKGG PANFLDVGGGA E+QVQKAFELLN+D KV  ILVNIFGGIMRCDVIATG+INAA+ IG+KKP+VIRLQGTNV+ A +LI  CGF+MI++ DLEDAAEKAV VAEI  QA  + + ++ +
Sbjct:    4 VRNLNVHEYISMEIMNQHGIATPKNFVANSPEEAEHIFTTMMN----KHVVIKAQVLSGGRGLGTFKNGFKGGVHMVTRKGQAAEMASSMLGQELVTKQA-PNGILCQK-------------VLLMERMYMRNEMYLSILMDRASGGPLLVGSPRGGTSIEDVAHSNPELIFTEPIDINVGLTVEAANRMARNIGLEEGTESHAKAVTLINNLYDMFLGCDCTQVEVNPLAETPEGDVVVCDAKVNFDDNAEFRQKSIFERRDFSQEDPRE----VEASKYDLNYIGLDGNIGCMVNGAGLAMSTMDIIQLKGGSPANFLDVGGGANEKQVQKAFELLNSDDKVQAILVNIFGGIMRCDVIATGIINAAQEIGIKKPLVIRLQGTNVDAARKLIEGCGFRMILAEDLEDAAEKAVGVAEIVKQAQNIKVGLQFE 415          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig104.454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0B9_ECTSI3.340e-29588.33Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A835YQF4_9STRA1.730e-19966.59Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A067CEF9_SAPPC2.360e-18363.15Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A6T6HZE5_9STRA6.520e-18362.33Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A024T9H2_9STRA2.540e-18261.64Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A485KYE4_9STRA7.490e-18263.39Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A7S3XRL5_HETAK2.130e-17863.27Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
B7FXA2_PHATC1.890e-17661.70Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A1Z5K8M0_FISSO5.580e-17661.93Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
B8BS06_THAPS3.790e-17561.98Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013815ATP-grasp fold, subdomain 1GENE3D3.30.1490.20coord: 66..156
e-value: 7.4E-29
score: 101.3
IPR016102Succinyl-CoA synthetase-likeGENE3D3.40.50.261coord: 315..461
e-value: 1.1E-51
score: 176.6
IPR016102Succinyl-CoA synthetase-likeSUPERFAMILY52210Succinyl-CoA synthetase domainscoord: 317..459
IPR005809Succinate--CoA synthetase, beta subunitTIGRFAMTIGR01016TIGR01016coord: 46..459
e-value: 3.9E-119
score: 396.0
IPR005809Succinate--CoA synthetase, beta subunitPIRSFPIRSF001554SucCS_betacoord: 45..461
e-value: 4.6E-135
score: 448.1
IPR005809Succinate--CoA synthetase, beta subunitPANTHERPTHR11815SUCCINYL-COA SYNTHETASE BETA CHAINcoord: 40..461
IPR005809Succinate--CoA synthetase, beta subunitHAMAPMF_00558Succ_CoA_betacoord: 45..460
score: 36.952
IPR005811ATP-citrate lyase/succinyl-CoA ligasePFAMPF00549Ligase_CoAcoord: 336..456
e-value: 1.5E-23
score: 83.3
IPR013650ATP-grasp fold, succinyl-CoA synthetase-typePFAMPF08442ATP-grasp_2coord: 46..272
e-value: 1.5E-55
score: 187.9
NoneNo IPR availableGENE3D3.30.470.20coord: 162..309
e-value: 1.4E-51
score: 176.1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..479
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availableSUPERFAMILY56059Glutathione synthetase ATP-binding domain-likecoord: 45..308
IPR017866Succinyl-CoA synthetase, beta subunit, conserved sitePROSITEPS01217SUCCINYL_COA_LIG_3coord: 331..355

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig104contigD-herbacea_F_contig104:172174..193092 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig104.454.1mRNA_D-herbacea_F_contig104.454.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig104 170982..193193 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig104.454.1 ID=prot_D-herbacea_F_contig104.454.1|Name=mRNA_D-herbacea_F_contig104.454.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=480bp
MASLRVVAGCARALRHPSRALARTSFLSGKPLVAAGGAGQQVRRLNVHEY
VSMKLMEEHDIDIPASIMAETPEDAEKACAEIMGTSGMKDVVIKAQVLSG
GRGRGHFSNGFKSGVHMCLKPEDAKHYASEMLGQKLITKQTGEDGLPCDK
ACLSGRGGGGDGGVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTS
IEDLAETNPELILKEEVDVMVGLTDAQASKIAQHLKLSVDGPSYEAGKTL
LKNMYSMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQGKTF
EFRDYTQEDTREASDAVEAAKYDLNYIGLSGNIGCMVNGAGLAMSTMDII
KLKGGDPANFLDVGGGATEQQVQKAFELLNADPKVATILVNIFGGIMRCD
VIATGVINAAKSIGMKKPIVIRLQGTNVEQANELIANCGFKMIISNDLED
AAEKAVAVAEIYSQATKVGIDVELQTATA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017866Succ-CoA_synthase_bsu_CS
IPR013650ATP-grasp_succ-CoA_synth-type
IPR005811CoA_ligase
IPR005809Succ_CoA_synthase_bsu
IPR016102Succinyl-CoA_synth-like
IPR013815ATP_grasp_subdomain_1