mRNA_D-herbacea_F_contig104.454.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig104.454.1 vs. uniprot
Match: D7G0B9_ECTSI (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0B9_ECTSI) HSP 1 Score: 813 bits (2100), Expect = 2.090e-288 Identity = 424/480 (88.33%), Postives = 443/480 (92.29%), Query Frame = 3
Query: 102 MASLRVVAGCARALRHPSRALARTS-FLSGKPLVAAGGAGQQVRRLNVHEYVSMKLMEEHDIDIPASIMAETPEDAEKACAEIMGTSGMKDVVIKAQVLSGGRGRGHFSNGFKSGVHMCLKPEDAKHYASEMLGQKLITKQTGEDGLPCDKACLSGRGGGGDGGVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAETNPELILKEEVDVMVGLTDAQASKIAQHLKLSVDGPSYEAGKTLLKNMYSMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQGKTFEFRDYTQEDTREASDAVEAAKYDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEQQVQKAFELLNADPKVATILVNIFGGIMRCDVIATGVINAAKSIGMKKPIVIRLQGTNVEQANELIANCGFKMIISNDLEDAAEKAVAVAEIYSQATKVGIDVELQTATA 1538
MAS+RVVAGCARALR+P +AR S LSGKP+ A GGAGQQVRRLNVHEYVSM++M EHDIDIPAS MAETPEDAEKACAEIMG + MKDVVIKAQVLSGGRGRGHF NGF+SGVHMCLKP DAKHYASEMLGQKLITKQTGEDGLPCDK VLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAE+NPELI+KEEVD+M GLTDAQA KIA+HLKLS DGPSYEAGKTLLKNMY+MFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQ TF+FRDYTQEDTRE VEAAKYDLNYIGL+GNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATE+QVQKAFELLNADPKVATILVNIFGGIMRCDVIA+GVINAAKSIGMKKPIVIRLQGTNVEQANELIAN GFKMIISNDL+DAAEKAVAVAEIYSQATKVGIDVELQTA+A
Sbjct: 1 MASMRVVAGCARALRNPRGLVARNSPLLSGKPISATGGAGQQVRRLNVHEYVSMQIMAEHDIDIPASKMAETPEDAEKACAEIMGGNAMKDVVIKAQVLSGGRGRGHFDNGFESGVHMCLKPSDAKHYASEMLGQKLITKQTGEDGLPCDK-------------VLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEHLKLSSDGPSYEAGKTLLKNMYAMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQKDTFQFRDYTQEDTRE----VEAAKYDLNYIGLTGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEEQVQKAFELLNADPKVATILVNIFGGIMRCDVIASGVINAAKSIGMKKPIVIRLQGTNVEQANELIANSGFKMIISNDLDDAAEKAVAVAEIYSQATKVGIDVELQTASA 463
BLAST of mRNA_D-herbacea_F_contig104.454.1 vs. uniprot
Match: A0A835YQF4_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF4_9STRA) HSP 1 Score: 571 bits (1471), Expect = 1.960e-193 Identity = 297/446 (66.59%), Postives = 352/446 (78.92%), Query Frame = 3
Query: 207 GGAGQQVRRLNVHEYVSMKLMEEHDIDIPASIMAETPEDAEKACAEIM---GTSGMK-DVVIKAQVLSGGRGRGHFSNGFKSGVHMCLKPEDAKHYASEMLGQKLITKQTGEDGLPCDKACLSGRGGGGDGGVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAETNPELILKEEVDVMVGLTDAQASKIAQHLKLSVDGPSYEAGKTLLKNMYSMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQGKTFEFRDYTQEDTREASDAVEAAKYDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEQQVQKAFELLNADPKVATILVNIFGGIMRCDVIATGVINAAKSIGMKKPIVIRLQGTNVEQANELIANCGFKMIISNDLEDAAEKAVAVAEIYSQATKVGIDVELQTA 1532
G A Q R LNVHEYVSMK++ H++ P SIMA +PE+AE AC EIM G GMK DVVIKAQVLSGGRG GHF NGFK GVHMC P +A+ YA +MLG KLITKQTG GLPC K VLLMER+YMRREMYLSIMMDR +GPV+VAC GGTSIEDLAE +PEL++K V + GLT+ QA KIA+HL+L P+Y+ G T+LKN+Y MFI++DCTLVE+NPLAETP+GRV+ACDAKLNFDDNA +RQ F RDY+QED RE VEAAKYDLNYIGL+GNIGCMVNGAGLAM+TMDIIKLKGGDPANFLDVGGGATE QVQKA ELL+AD V I++NIFGGIMRCD+IA+GV+NA K++G+KKPI++RLQGTNV+QA ++IA+ FKMI++++LEDAAEKAVAVA + A G++V + A
Sbjct: 27 GAAACQARLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHK-------------VLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPRE----VEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFEIA 455
BLAST of mRNA_D-herbacea_F_contig104.454.1 vs. uniprot
Match: A0A067CEF9_SAPPC (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CEF9_SAPPC) HSP 1 Score: 529 bits (1362), Expect = 2.630e-177 Identity = 281/445 (63.15%), Postives = 336/445 (75.51%), Query Frame = 3
Query: 192 PLVAAGGAGQQVRRLNVHEYVSMKLMEEHDIDIPASIMAETPEDAEKACAEIMGTSGMKDVVIKAQVLSGGRGRGHFSNGFKSGVHMCLKPEDAKHYASEMLGQKLITKQTGEDGLPCDKACLSGRGGGGDGGVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAETNPELILKEEVDVMVGLTDAQASKIAQHLKLSVDGPSYEAGKTLLKNMYSMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQGKTFEFRDYTQEDTREASDAVEAAKYDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEQQVQKAFELLNADPKVATILVNIFGGIMRCDVIATGVINAAKSIGMKKPIVIRLQGTNVEQANELIANCGFKMIISNDLEDAAEKAVAVAEIYSQATKVGIDVELQ 1526
PL+ A GQQVRRLN+HEY SM++M+ + IPAS+ A TP +AE A + G KDVVIKAQ L+GGRG GHF NGFK GVHMC KPEDAK++A +MLG+ L+TKQTGE G+ K V LMER+YMRREMY SI+MDR S GPV+VA P GGTSIED+A PELI KE V++ G T Q +++A ++ LS G S + G L+ N+Y+MFI D TLVEINPLAETPEG V ACDAK+NFDDNA +R F RD TQED RE VEA+ YDLNYIGL GNIGC+VNGAGLAM+TMDII L GG PANFLDVGGGATE QV+KAFE+LNADP+V +ILVNIFGGIMRCDVIA GVI AAK +GMKKPIVIRLQGTNVE+A +LI N GF+MI++NDL+DAA+KAV +A+I +QA +V ++V +
Sbjct: 12 PLLRA--PGQQVRRLNLHEYQSMEIMKSFGVAIPASLHATTPAEAEAAYNTLKGGDATKDVVIKAQALTGGRGLGHFKNGFKGGVHMCTKPEDAKNFAEKMLGETLVTKQTGEKGIEVAK-------------VFLMERVYMRREMYFSILMDRASNGPVLVASPAGGTSIEDVAHATPELIFKEAVNITTGPTSEQLNRLAANMGLS--GESQKRGVELMNNLYNMFIGTDATLVEINPLAETPEGNVYACDAKINFDDNASFRHKDIFAKRDKTQEDPRE----VEASAYDLNYIGLDGNIGCLVNGAGLAMATMDIISLFGGSPANFLDVGGGATESQVKKAFEILNADPQVKSILVNIFGGIMRCDVIAAGVIAAAKDLGMKKPIVIRLQGTNVEKARQLIENSGFRMIVANDLDDAAQKAVKIADIVAQAEEVHVNVSFE 435
BLAST of mRNA_D-herbacea_F_contig104.454.1 vs. uniprot
Match: A0A6T6HZE5_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6HZE5_9STRA) HSP 1 Score: 528 bits (1360), Expect = 7.230e-177 Identity = 283/454 (62.33%), Postives = 339/454 (74.67%), Query Frame = 3
Query: 171 TSFLSGKPL--VAAGGAGQQVRRLNVHEYVSMKLMEEHDIDIPASIMAETPEDAEKACAEIMGTSG--MKDVVIKAQVLSGGRGRGHFSNGFKSGVHMCLKPEDAKHYASEMLGQKLITKQTGEDGLPCDKACLSGRGGGGDGGVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAETNPELILKEEVDVMVGLTDAQASKIAQHLKLSVDGPSYEAGKTLLKNMYSMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQGKTFEFRDYTQEDTREASDAVEAAKYDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEQQVQKAFELLNADPKVATILVNIFGGIMRCDVIATGVINAAKSIGMKKPIVIRLQGTNVEQANELIANCGFKMIISNDLEDAAEKAVAVAEIYSQATKVGIDVE 1520
TS L K L AA G +R LNVHEY+SM+LM H I PA +A TP++AE I+ G +KD VIKAQVLSGGRG G F NGFK GV M KP AK +A+ MLG++L+TKQ +G+ C+K V LMERMYMRREMYLSI+MDR SQGP++V P GGT+IED+A++NPE+I E +D++ G+ Q ++A +L L PS+E TL+KN+YSMF + DCT VE+NPLAETPEG V+ CDAK+NFD NAE+RQ F+ RD+TQED+RE VEA+KYDLNYIGL GNIGCMVNGAGLAMSTMDII+LKGG PANFLDVGGGATE QVQKAFE+LNADP V ILVNIFGGIMRCDVIA+G+INAAK IG++KPIVIRLQGTNV +A +I CGFKMII+ DLEDAAEKAV VAEI +QA K+ + V+
Sbjct: 7 TSVLGRKALQRTAAPAVGA-IRNLNVHEYLSMELMNAHQIATPAGHVASTPDEAEHIFQNILNKPGEPLKDAVIKAQVLSGGRGLGTFKNGFKGGVQMVTKPGQAKDFAASMLGEELVTKQA-PNGIICNK-------------VFLMERMYMRREMYLSILMDRASQGPLLVGSPRGGTAIEDIAKSNPEVIFTEPIDIVEGIQQDQCERMATNLGLEAGSPSHENAITLMKNLYSMFTQCDCTQVEVNPLAETPEGDVVVCDAKVNFDSNAEYRQSSIFDKRDFTQEDSRE----VEASKYDLNYIGLDGNIGCMVNGAGLAMSTMDIIQLKGGAPANFLDVGGGATEDQVQKAFEILNADPNVHAILVNIFGGIMRCDVIASGIINAAKEIGIRKPIVIRLQGTNVNEAKTMIEGCGFKMIIAEDLEDAAEKAVGVAEIVAQADKIQVGVK 441
BLAST of mRNA_D-herbacea_F_contig104.454.1 vs. uniprot
Match: A0A024T9H2_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T9H2_9STRA) HSP 1 Score: 526 bits (1355), Expect = 2.760e-176 Identity = 278/451 (61.64%), Postives = 339/451 (75.17%), Query Frame = 3
Query: 174 SFLSGKPLVAAGGAGQQVRRLNVHEYVSMKLMEEHDIDIPASIMAETPEDAEKACAEIMGTSGMKDVVIKAQVLSGGRGRGHFSNGFKSGVHMCLKPEDAKHYASEMLGQKLITKQTGEDGLPCDKACLSGRGGGGDGGVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAETNPELILKEEVDVMVGLTDAQASKIAQHLKLSVDGPSYEAGKTLLKNMYSMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQGKTFEFRDYTQEDTREASDAVEAAKYDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEQQVQKAFELLNADPKVATILVNIFGGIMRCDVIATGVINAAKSIGMKKPIVIRLQGTNVEQANELIANCGFKMIISNDLEDAAEKAVAVAEIYSQATKVGIDVELQ 1526
S + PL+ GQQVRRLN+HEY SMK+M+ + + IPAS A+TPE A + ++ G + KDVVIKAQ L+GGRG GHF NGFK GVHMC K EDAK +A +M+G+ L+TKQTG G+ K V LMER+Y+RREMY SI+MDR SQGPV+V P GGTSIED+A PELI KE VD+M G T+ Q +++A+++ L DGP+ G LL N+Y MFI D T VEINPLAETPEG+V ACDAK+NFDDNA +RQ + F RD TQED RE VEA+ YDLNYIGL GNIGC+VNGAGLAM+TMDII+L GG PANFLDVGGGATE QV+KAFE+LNAD +V +ILVNIFGGIMRCDVIA G+I AAK +GMKKPIVIRLQGTNVE+A LI N GF+MI++NDL+DAA+KAV +A+I +QA +V ++V +
Sbjct: 4 SIIKATPLLRP--TGQQVRRLNLHEYQSMKIMQSYGVAIPASEAADTPEQAVQVYNKLKGGNDTKDVVIKAQALTGGRGLGHFKNGFKGGVHMCTKAEDAKKFAQKMIGETLVTKQTGVKGIEVAK-------------VFLMERVYLRREMYFSILMDRASQGPVLVGSPAGGTSIEDVAHNTPELIFKEHVDIMTGPTNEQLTRLAKNMGL--DGPALPRGVELLGNLYKMFIGVDATQVEINPLAETPEGQVFACDAKINFDDNAAFRQAEIFAQRDKTQEDARE----VEASAYDLNYIGLDGNIGCLVNGAGLAMATMDIIQLFGGSPANFLDVGGGATEAQVKKAFEILNADNQVKSILVNIFGGIMRCDVIAAGIIAAAKDLGMKKPIVIRLQGTNVEKARALIENSGFRMIVANDLDDAAQKAVKIADIVTQAEEVHVNVSFE 433
BLAST of mRNA_D-herbacea_F_contig104.454.1 vs. uniprot
Match: A0A485KYE4_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485KYE4_9STRA) HSP 1 Score: 525 bits (1352), Expect = 8.070e-176 Identity = 277/437 (63.39%), Postives = 331/437 (75.74%), Query Frame = 3
Query: 216 GQQVRRLNVHEYVSMKLMEEHDIDIPASIMAETPEDAEKACAEIMGTSGMKDVVIKAQVLSGGRGRGHFSNGFKSGVHMCLKPEDAKHYASEMLGQKLITKQTGEDGLPCDKACLSGRGGGGDGGVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAETNPELILKEEVDVMVGLTDAQASKIAQHLKLSVDGPSYEAGKTLLKNMYSMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQGKTFEFRDYTQEDTREASDAVEAAKYDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEQQVQKAFELLNADPKVATILVNIFGGIMRCDVIATGVINAAKSIGMKKPIVIRLQGTNVEQANELIANCGFKMIISNDLEDAAEKAVAVAEIYSQATKVGIDVELQ 1526
GQQVRRLN+HEY SM++M+ + + IPAS A TPE+A ++ G KDVVIKAQ L+GGRG GHF NGFK GVHMC K EDAK +A +M+G+ L+TKQTGE G+ K V LMER+YMRREMY SI+MDR SQGPV+VA P GGTSIED+A PELI KE +D+M G TD Q ++A ++ L +G S G LL N+Y MFI D TLVEINPLAETP+G+V ACDAK+NFDDNA +RQ F RD TQED RE VEA+ YDLNYIGL GNIGC+VNGAGLAM+TMDII+L GG PANFLDVGGGATE QV+KAFE+LNAD +V +ILVNIFGGIMRCDVIA G+I AAK +GMKKPIVIRLQGTNVE+A LI N GF+MI++NDL+DAA+KAV +A+I SQA +V ++V +
Sbjct: 17 GQQVRRLNLHEYQSMQIMQSYGVAIPASQHANTPEEAVNVYNKLKGGDEGKDVVIKAQALTGGRGLGHFKNGFKGGVHMCTKAEDAKTFAQKMIGETLVTKQTGEKGIEVAK-------------VFLMERVYMRREMYFSILMDRASQGPVMVASPAGGTSIEDVAHATPELIFKENIDIMTGPTDEQLKRLASNMGL--EGVSLTRGVELLGNLYKMFIGVDATLVEINPLAETPDGKVFACDAKINFDDNAAFRQKDIFAKRDKTQEDARE----VEASAYDLNYIGLDGNIGCLVNGAGLAMATMDIIQLFGGSPANFLDVGGGATESQVKKAFEILNADTQVKSILVNIFGGIMRCDVIAAGIIAAAKELGMKKPIVIRLQGTNVEKARALIENSGFRMIVANDLDDAAQKAVKIADIVSQAEEVHVNVSFE 434
BLAST of mRNA_D-herbacea_F_contig104.454.1 vs. uniprot
Match: A0A7S3XRL5_HETAK (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRL5_HETAK) HSP 1 Score: 515 bits (1327), Expect = 1.470e-172 Identity = 267/422 (63.27%), Postives = 327/422 (77.49%), Query Frame = 3
Query: 267 MEEHDIDIPASIMAETPEDAEKACAEIMGTSGMKDVVIKAQVLSGGRGRGHFSNGFKSGVHMCLKPEDAKHYASEMLGQKLITKQTGEDGLPCDKACLSGRGGGGDGGVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAETNPELILKEEVDVMVGLTDAQASKIAQHLKLSVDGPSYEAGKTLLKNMYSMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQGKTFEFRDYTQEDTREASDAVEAAKYDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEQQVQKAFELLNADPKVATILVNIFGGIMRCDVIATGVINAAKSIGMKKPIVIRLQGTNVEQANELIANCGFKMIISNDLEDAAEKAVAVAEIYSQATKVGIDVELQTA 1532
M ++ + P + +A TP++AE ++ KDVVIKAQVL+GGRG G F++GFK GVHMC +P AK YA +MLG L+TKQT +G+ C K V LMER+YMRREMYLS+M+DRG+QGP++VA P GGTSIED+AE PELI + +D+M GLTDAQASK+A +L + PS+ L+KN+Y+MFIE D T VEINPLAET G VM DAKLNFDDNAE+RQ + +RD+TQED RE VEAAK+DLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATE QVQKAFE+LNADPKV++ILVNIFGGIMRCD+IA G+INAAK IG+ KPI+IRL+GTNVEQAN LIA+ G+KM + +DLEDAAEKAV+++ I ++A K+G+ V ++A
Sbjct: 1 MAKYGVKTPPAQVATTPDEAESIYQKMTAGDPNKDVVIKAQVLAGGRGLGTFTSGFKGGVHMCTRPGQAKDYAEKMLGNYLVTKQTTAEGVLCSK-------------VFLMERVYMRREMYLSLMLDRGTQGPLMVASPCGGTSIEDVAEQTPELIFTQPIDIMEGLTDAQASKMATNLGMVEGSPSHSDAIALMKNLYTMFIETDATQVEINPLAETSTGEVMCADAKLNFDDNAEFRQKEVHAYRDFTQEDPRE----VEAAKFDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEGQVQKAFEILNADPKVSSILVNIFGGIMRCDIIAGGIINAAKEIGLGKPIIIRLEGTNVEQANRLIADSGYKMTVCDDLEDAAEKAVSISNIMAEANKIGVKVSFESA 405
BLAST of mRNA_D-herbacea_F_contig104.454.1 vs. uniprot
Match: B7FXA2_PHATC (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXA2_PHATC) HSP 1 Score: 511 bits (1317), Expect = 1.790e-170 Identity = 269/436 (61.70%), Postives = 324/436 (74.31%), Query Frame = 3
Query: 225 VRRLNVHEYVSMKLMEEHDIDIPASIMAETPEDAEKACAEIMGTSGM--KDVVIKAQVLSGGRGRGHFSNGFKSGVHMCLKPEDAKHYASEMLGQKLITKQTGEDGLPCDKACLSGRGGGGDGGVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAETNPELILKEEVDVMVGLTDAQASKIAQHLKLSVDGPSYEAGKTLLKNMYSMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQGKTFEFRDYTQEDTREASDAVEAAKYDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEQQVQKAFELLNADPKVATILVNIFGGIMRCDVIATGVINAAKSIGMKKPIVIRLQGTNVEQANELIANCGFKMIISNDLEDAAEKAVAVAEIYSQATKVGIDVELQ 1526
VR LNVHEY+SM++M+ H I P +A PE+AE + G KD+VIKAQVLSGGRG G F NGFK GVHM KP A+ +A+ MLG +L+TKQ +G+ C+K VLLMERMYMRREMYLSI+MDRGSQGP++VA P GGTSIED+A TNPE+I + +D+ GLT A ++A +L L ++ L++N+YSMFI DCT VE+NPLAETPEG ++ CDAK+NFDDNAE+RQ F RD +QED RE V+A+KYDLNYIGL G IGCMVNGAGLAMSTMDII+LKGG PANFLDVGGGA E QVQKAFE+LN+D +V ILVNIFGGIMRCDVIATG+INAAK IG+ KPIVIRLQGTNV +A LI CGF+MI++ DLEDAAEKAV VAEI +QA K+ + V+ +
Sbjct: 22 VRNLNVHEYISMEIMKNHGIQTPECYVASNPEEAENIFLNSLNRPGAPKKDIVIKAQVLSGGRGLGTFKNGFKGGVHMVTKPGQAREFAAAMLGNELVTKQA-PNGIVCNK-------------VLLMERMYMRREMYLSILMDRGSQGPLLVASPRGGTSIEDVAATNPEVIFTQPIDITEGLTPEGAHRMASNLGLEEGSTGHDKAVILMQNLYSMFIACDCTQVEVNPLAETPEGDIVVCDAKVNFDDNAEFRQSSIFARRDTSQEDVRE----VDASKYDLNYIGLEGTIGCMVNGAGLAMSTMDIIQLKGGSPANFLDVGGGANETQVQKAFEILNSDSQVKAILVNIFGGIMRCDVIATGIINAAKEIGINKPIVIRLQGTNVNEAKTLIEGCGFRMILAEDLEDAAEKAVGVAEIAAQAEKIQVGVKFE 439
BLAST of mRNA_D-herbacea_F_contig104.454.1 vs. uniprot
Match: A0A1Z5K8M0_FISSO (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8M0_FISSO) HSP 1 Score: 510 bits (1314), Expect = 5.210e-170 Identity = 270/436 (61.93%), Postives = 328/436 (75.23%), Query Frame = 3
Query: 225 VRRLNVHEYVSMKLMEEHDIDIPASIMAETPEDAEKACAEIMGTSG--MKDVVIKAQVLSGGRGRGHFSNGFKSGVHMCLKPEDAKHYASEMLGQKLITKQTGEDGLPCDKACLSGRGGGGDGGVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAETNPELILKEEVDVMVGLTDAQASKIAQHLKLSVDGPSYEAGKTLLKNMYSMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQGKTFEFRDYTQEDTREASDAVEAAKYDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEQQVQKAFELLNADPKVATILVNIFGGIMRCDVIATGVINAAKSIGMKKPIVIRLQGTNVEQANELIANCGFKMIISNDLEDAAEKAVAVAEIYSQATKVGIDVELQ 1526
VR LNVHEYVSM++M+ H I P +A TPE+AE+ + G ++DVVIKAQVLSGGRG GHF +GFK GVHM K A+ +A MLG++L+TKQ +G+ C+K VLLMERMYMR EMYLSI+MDR SQGP++VA P GGTSIED+A TNPE+I + +D+ VGLTD QA ++A +L L + TL+KN+Y+MFI DCT VE+NPLAETP G ++ CDAK+NFDDNAE+RQ F RD TQED RE V A++YDLNYIGL GNIGCMVNGAGLAMSTMDII+LKGG PANFLDVGGGA+EQQVQKAFE+LNADPKV ILVNIFGGIMRCDVIA G++NA K IG+ KPIVIRLQGTNV++A LI ++MI+++DLE AAEKAV VAEI +QA K+ +DV+ +
Sbjct: 22 VRHLNVHEYVSMEIMQAHGIKTPNCSVASTPEEAEQIFVHKLNKPGTPLQDVVIKAQVLSGGRGLGHFKSGFKGGVHMVTKAGQARDFAKSMLGEELVTKQA-PNGIICNK-------------VLLMERMYMRNEMYLSILMDRASQGPLMVASPRGGTSIEDVAATNPEVIFTQPIDITVGLTDEQAQRMAGNLGLEPGSEGHAQAVTLMKNLYNMFIACDCTQVEVNPLAETPSGDIVVCDAKVNFDDNAEFRQTGIFARRDTTQEDPRE----VAASEYDLNYIGLDGNIGCMVNGAGLAMSTMDIIQLKGGSPANFLDVGGGASEQQVQKAFEILNADPKVKAILVNIFGGIMRCDVIANGILNAVKEIGISKPIVIRLQGTNVDKAKTLIEGSPYRMILADDLEAAAEKAVGVAEIVAQAEKIEVDVKFE 439
BLAST of mRNA_D-herbacea_F_contig104.454.1 vs. uniprot
Match: B8BS06_THAPS (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BS06_THAPS) HSP 1 Score: 507 bits (1306), Expect = 3.430e-169 Identity = 269/434 (61.98%), Postives = 324/434 (74.65%), Query Frame = 3
Query: 225 VRRLNVHEYVSMKLMEEHDIDIPASIMAETPEDAEKACAEIMGTSGMKDVVIKAQVLSGGRGRGHFSNGFKSGVHMCLKPEDAKHYASEMLGQKLITKQTGEDGLPCDKACLSGRGGGGDGGVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAETNPELILKEEVDVMVGLTDAQASKIAQHLKLSVDGPSYEAGKTLLKNMYSMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQGKTFEFRDYTQEDTREASDAVEAAKYDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEQQVQKAFELLNADPKVATILVNIFGGIMRCDVIATGVINAAKSIGMKKPIVIRLQGTNVEQANELIANCGFKMIISNDLEDAAEKAVAVAEIYSQATKVGIDVELQ 1526
VR LNVHEY+SM++M +H I P + +A +PE+AE +M K VVIKAQVLSGGRG G F NGFK GVHM + A AS MLGQ+L+TKQ +G+ C K VLLMERMYMR EMYLSI+MDR S GP++V P GGTSIED+A +NPELI E +D+ VGLT A+++A+++ L S+ TL+ N+Y MF+ DCT VE+NPLAETPEG V+ CDAK+NFDDNAE+RQ FE RD++QED RE VEA+KYDLNYIGL GNIGCMVNGAGLAMSTMDII+LKGG PANFLDVGGGA E+QVQKAFELLN+D KV ILVNIFGGIMRCDVIATG+INAA+ IG+KKP+VIRLQGTNV+ A +LI CGF+MI++ DLEDAAEKAV VAEI QA + + ++ +
Sbjct: 4 VRNLNVHEYISMEIMNQHGIATPKNFVANSPEEAEHIFTTMMN----KHVVIKAQVLSGGRGLGTFKNGFKGGVHMVTRKGQAAEMASSMLGQELVTKQA-PNGILCQK-------------VLLMERMYMRNEMYLSILMDRASGGPLLVGSPRGGTSIEDVAHSNPELIFTEPIDINVGLTVEAANRMARNIGLEEGTESHAKAVTLINNLYDMFLGCDCTQVEVNPLAETPEGDVVVCDAKVNFDDNAEFRQKSIFERRDFSQEDPRE----VEASKYDLNYIGLDGNIGCMVNGAGLAMSTMDIIQLKGGSPANFLDVGGGANEKQVQKAFELLNSDDKVQAILVNIFGGIMRCDVIATGIINAAQEIGIKKPLVIRLQGTNVDAARKLIEGCGFRMILAEDLEDAAEKAVGVAEIVKQAQNIKVGLQFE 415 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig104.454.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig104.454.1 >prot_D-herbacea_F_contig104.454.1 ID=prot_D-herbacea_F_contig104.454.1|Name=mRNA_D-herbacea_F_contig104.454.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=480bp MASLRVVAGCARALRHPSRALARTSFLSGKPLVAAGGAGQQVRRLNVHEYback to top mRNA from alignment at D-herbacea_F_contig104:170982..193193- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig104.454.1 ID=mRNA_D-herbacea_F_contig104.454.1|Name=mRNA_D-herbacea_F_contig104.454.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=22212bp|location=Sequence derived from alignment at D-herbacea_F_contig104:170982..193193- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig104:170982..193193- >mRNA_D-herbacea_F_contig104.454.1 ID=mRNA_D-herbacea_F_contig104.454.1|Name=mRNA_D-herbacea_F_contig104.454.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2880bp|location=Sequence derived from alignment at D-herbacea_F_contig104:170982..193193- (Desmarestia herbacea DmunF female)back to top |