prot_D-herbacea_F_contig1033.446.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1033.446.1
Unique Nameprot_D-herbacea_F_contig1033.446.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length356
Homology
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BLAST of mRNA_D-herbacea_F_contig1033.446.1 vs. uniprot
Match: D7G5D6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D6_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 9.640e-12
Identity = 55/141 (39.01%), Postives = 72/141 (51.06%), Query Frame = 0 
Query:  193 SGCLAPLTVALEWFDD-ADLDLRVAEPGAGDRVFYGNRGGKFGYLDQDNTSGPEDGPEQYIVYGGFPASSTASSSSEEYPLGQYWLVVHSYSNDYAR--FKLTATTGSGEVILDEEGTI----------------DPECGG 314
            S C+  LT+ LEW  + +D+DL V EPG G+ V++ NRGG  G+LD D+T G   GPE YI+        +A   +    LG+Y   V  YS D A   ++LTA   SGEV+  EEG                  DP CGG
Sbjct:  309 SACVPSLTITLEWTGEISDVDLYVVEPG-GEVVYFSNRGGDVGFLDNDDTYGF--GPENYII-------DSALDPAASQVLGEYETYVKLYSGDAATETWRLTARV-SGEVVWIEEGDFISSTQSDTFAVSLSVYDPTCGG 438
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BLAST of mRNA_D-herbacea_F_contig1033.446.1 vs. uniprot
Match: D7G3X5_ECTSI (VWFD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3X5_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 1.240e-11
Identity = 55/141 (39.01%), Postives = 72/141 (51.06%), Query Frame = 0 
Query:  193 SGCLAPLTVALEWFDD-ADLDLRVAEPGAGDRVFYGNRGGKFGYLDQDNTSGPEDGPEQYIVYGGFPASSTASSSSEEYPLGQYWLVVHSYSNDYAR--FKLTATTGSGEVILDEEGTI----------------DPECGG 314
            S C+  LT+ LEW  + +D+DL V EPG G+ V++ NRGG  G+LD D+T G   GPE YI+        +A   +    LG+Y   V  YS D A   ++LTA   SGEV+  EEG                  DP CGG
Sbjct:  435 SACVPSLTITLEWTGETSDVDLYVVEPG-GEVVYFSNRGGDVGFLDNDDTYGF--GPENYII-------DSALDPAASQVLGEYETYVKLYSGDAATETWRLTARV-SGEVVWIEEGDFISSTQSDTFAVSLSVYDPTCGG 564
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1033.446.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5D6_ECTSI9.640e-1239.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3X5_ECTSI1.240e-1139.01VWFD domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..355
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.734

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1033contigD-herbacea_F_contig1033:13944..17559 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1033.446.1mRNA_D-herbacea_F_contig1033.446.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1033 13380..20169 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1033.446.1 ID=prot_D-herbacea_F_contig1033.446.1|Name=mRNA_D-herbacea_F_contig1033.446.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=356bp
MKTQSVAIASVLGVLFAGFTVTEAGKETIEVTEGAVTFTVDTYDDGRNKP
YRVTWNDPDDGFLCQFKFNMDGVVTNIETDGDTYKVLYGSNGNLRRVRRT
SSRRTLTEGGQGVVAEVVDANDSIHTGGHRRLYDCGDCEDTVNTLVSNGA
PSVCNLVGYGDPILDSAARSIDVFCDNFQLLIAEEACEGQCESGCLAPLT
VALEWFDDADLDLRVAEPGAGDRVFYGNRGGKFGYLDQDNTSGPEDGPEQ
YIVYGGFPASSTASSSSEEYPLGQYWLVVHSYSNDYARFKLTATTGSGEV
ILDEEGTIDPECGGENLARFFLVDLSGYVDNDCDLPDMAQIEGEVAAEGD
QPTKD*
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