prot_D-herbacea_F_contig1031.444.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1031.444.1
Unique Nameprot_D-herbacea_F_contig1031.444.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length106
Homology
[Close]
BLAST of mRNA_D-herbacea_F_contig1031.444.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 1.920e-32
Identity = 61/105 (58.10%), Postives = 75/105 (71.43%), Query Frame = 0 
Query:    1 VFVDLSGPRQIASKGGARYIMIVKDDFSRYVWTYFLPHKSDAAPAFRRFLADARDYGTPSILQCVRSDNGGEFAGKSFRDLCDERGVRKEFTTPDTPKFNGVAER 105
            VFVDL G + +AS GG  Y MIVKDDF+R  W YFL HKSDA  AFR FLA  R  G PS+++ VRSDNGGEF G  F  +C+E  +++EFT   +P++NGVAER
Sbjct:  727 VFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAER 831
[Close]
BLAST of mRNA_D-herbacea_F_contig1031.444.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 1.920e-32
Identity = 61/105 (58.10%), Postives = 75/105 (71.43%), Query Frame = 0 
Query:    1 VFVDLSGPRQIASKGGARYIMIVKDDFSRYVWTYFLPHKSDAAPAFRRFLADARDYGTPSILQCVRSDNGGEFAGKSFRDLCDERGVRKEFTTPDTPKFNGVAER 105
            VFVDL G + +AS GG  Y MIVKDDF+R  W YFL HKSDA  AFR FLA  R  G PS+++ VRSDNGGEF G  F  +C+E  +++EFT   +P++NGVAER
Sbjct:  434 VFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAER 538
[Close]
BLAST of mRNA_D-herbacea_F_contig1031.444.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 8.900e-32
Identity = 61/105 (58.10%), Postives = 75/105 (71.43%), Query Frame = 0 
Query:    1 VFVDLSGPRQIASKGGARYIMIVKDDFSRYVWTYFLPHKSDAAPAFRRFLADARDYGTPSILQCVRSDNGGEFAGKSFRDLCDERGVRKEFTTPDTPKFNGVAER 105
            VFVDL G + +AS GG  Y MIVKDDF+R  W YFL  KSDAA AFR FLA  R  G PS+++ VRSDNGGEF G  F  +C+E  +++EFT   +P++NGVAER
Sbjct:  633 VFVDLGGRKDVASVGGKHYPMIVKDDFTRRTWMYFLKSKSDAASAFRSFLASVRADGIPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAER 737
[Close]
BLAST of mRNA_D-herbacea_F_contig1031.444.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 9.660e-32
Identity = 58/105 (55.24%), Postives = 74/105 (70.48%), Query Frame = 0 
Query:    1 VFVDLSGPRQIASKGGARYIMIVKDDFSRYVWTYFLPHKSDAAPAFRRFLADARDYGTPSILQCVRSDNGGEFAGKSFRDLCDERGVRKEFTTPDTPKFNGVAER 105
            VF DL G + IAS GG  Y +IVKDDF+R+ W YFL +KSDA  AFR FLA  R  G PS ++ VRSDNGG+F G  F  +C+E  +++EFT   +P++NGVAER
Sbjct:   95 VFADLGGRKDIASVGGKHYPIIVKDDFTRHTWMYFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGKFFGGDFASVCNELLIKQEFTPAYSPQYNGVAER 199
[Close]
BLAST of mRNA_D-herbacea_F_contig1031.444.1 vs. uniprot
Match: A0A6H5K622_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K622_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 2.300e-31
Identity = 60/105 (57.14%), Postives = 75/105 (71.43%), Query Frame = 0 
Query:    1 VFVDLSGPRQIASKGGARYIMIVKDDFSRYVWTYFLPHKSDAAPAFRRFLADARDYGTPSILQCVRSDNGGEFAGKSFRDLCDERGVRKEFTTPDTPKFNGVAER 105
            VFVDL G + +AS GG  Y MI+KDDF+R  W YFL  KSDA  AFR FLA+ R  G PS+++ VRSDNGGEF G  F  +C+E  +++EFT   +P+FNGVAER
Sbjct:  478 VFVDLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLANVRADGIPSLIEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGVAER 582
[Close]
BLAST of mRNA_D-herbacea_F_contig1031.444.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 2.320e-31
Identity = 60/105 (57.14%), Postives = 75/105 (71.43%), Query Frame = 0 
Query:    1 VFVDLSGPRQIASKGGARYIMIVKDDFSRYVWTYFLPHKSDAAPAFRRFLADARDYGTPSILQCVRSDNGGEFAGKSFRDLCDERGVRKEFTTPDTPKFNGVAER 105
            VFVDL G + + S GG  Y MIVKDDF+R  W YFL +KSDAA AFR FLA  R  G PS+++ VRSDNGGEF G  F  +C+E  +++EFT   +P++NGVAER
Sbjct:  331 VFVDLGGKKAVVSVGGKYYPMIVKDDFTRRAWIYFLRNKSDAASAFRSFLASVRADGIPSLVETVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPQYNGVAER 435
[Close]
BLAST of mRNA_D-herbacea_F_contig1031.444.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 1.070e-30
Identity = 60/105 (57.14%), Postives = 73/105 (69.52%), Query Frame = 0 
Query:    1 VFVDLSGPRQIASKGGARYIMIVKDDFSRYVWTYFLPHKSDAAPAFRRFLADARDYGTPSILQCVRSDNGGEFAGKSFRDLCDERGVRKEFTTPDTPKFNGVAER 105
            VFVDL G +  AS GG  Y MIVKDDF+R  W YFL +KSDA  AFR FLA  R  G PS ++ VRSDNGGEF G  F  +C+E  +++EFT   +P++NGVAER
Sbjct:  193 VFVDLGGRKDSASVGGKHYPMIVKDDFTRRTWMYFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAER 297
[Close]
BLAST of mRNA_D-herbacea_F_contig1031.444.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 1.090e-30
Identity = 59/105 (56.19%), Postives = 75/105 (71.43%), Query Frame = 0 
Query:    1 VFVDLSGPRQIASKGGARYIMIVKDDFSRYVWTYFLPHKSDAAPAFRRFLADARDYGTPSILQCVRSDNGGEFAGKSFRDLCDERGVRKEFTTPDTPKFNGVAER 105
            VFV+L G + +AS GG  Y MI+KDDF+R  W YFL  KSDA  AFR FLA+ R  G PS+++ VRSDNGGEF G  F  +C+E  +++EFT   +P+FNGVAER
Sbjct:  454 VFVNLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLANVRADGIPSLIEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGVAER 558
[Close]
BLAST of mRNA_D-herbacea_F_contig1031.444.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 8.170e-30
Identity = 59/105 (56.19%), Postives = 73/105 (69.52%), Query Frame = 0 
Query:    1 VFVDLSGPRQIASKGGARYIMIVKDDFSRYVWTYFLPHKSDAAPAFRRFLADARDYGTPSILQCVRSDNGGEFAGKSFRDLCDERGVRKEFTTPDTPKFNGVAER 105
            VFVDL G + IAS GG  Y MIVKDDF+R  W YFL ++SDA  AFR FLA  R    PS ++ VRSDNGGEF G  F  +C+E  +++EFT   +P++NGVAER
Sbjct:  315 VFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWMYFLKNESDAGGAFRTFLASVRANIVPSFVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAER 419
[Close]
BLAST of mRNA_D-herbacea_F_contig1031.444.1 vs. uniprot
Match: A0A6H5J594_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J594_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 1.290e-29
Identity = 58/105 (55.24%), Postives = 73/105 (69.52%), Query Frame = 0 
Query:    1 VFVDLSGPRQIASKGGARYIMIVKDDFSRYVWTYFLPHKSDAAPAFRRFLADARDYGTPSILQCVRSDNGGEFAGKSFRDLCDERGVRKEFTTPDTPKFNGVAER 105
            VFVDL G + +AS GG  Y MI+KDDF+R  W YFL  KSDA  AFR F A+ R  G PS+++ VRSDNGG F G  F  +C+E  +++EFT   +P+FNGVAER
Sbjct:  128 VFVDLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFHANVRADGIPSLIEIVRSDNGGGFFGGEFASVCNELVIKQEFTPAHSPEFNGVAER 232
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1031.444.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBA7_9PHAE1.920e-3258.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE1.920e-3258.10Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2M6_9PHAE8.900e-3258.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVR5_9PHAE9.660e-3255.24Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K622_9PHAE2.300e-3157.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JB16_9PHAE2.320e-3157.14Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L3Y0_9PHAE1.070e-3057.14Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JH25_9PHAE1.090e-3056.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV76_9PHAE8.170e-3056.19Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5J594_9PHAE1.290e-2955.24Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..106
e-value: 2.1E-22
score: 81.3
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 3..105
e-value: 5.1E-17
score: 62.2
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..106
score: 17.395
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 1..105
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..105
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 3..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1031contigD-herbacea_F_contig1031:27677..27994 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1031.444.1mRNA_D-herbacea_F_contig1031.444.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1031 27677..27994 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1031.444.1 ID=prot_D-herbacea_F_contig1031.444.1|Name=mRNA_D-herbacea_F_contig1031.444.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=106bp
VFVDLSGPRQIASKGGARYIMIVKDDFSRYVWTYFLPHKSDAAPAFRRFL
ADARDYGTPSILQCVRSDNGGEFAGKSFRDLCDERGVRKEFTTPDTPKFN
GVAERA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR039537Retrotran_Ty1/copia-like
IPR001584Integrase_cat-core
IPR036397RNaseH_sf