prot_D-herbacea_F_contig1028.384.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1028.384.1
Unique Nameprot_D-herbacea_F_contig1028.384.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length57
Homology
BLAST of mRNA_D-herbacea_F_contig1028.384.1 vs. uniprot
Match: A0A1L2F1J2_9PHAE (NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Sargassaceae TaxID=3014 RepID=A0A1L2F1J2_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 9.530e-27
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0
Query:    1 LTTLLNIIDLVLPLLIAVAYFTLAERKIMAGIQRRKGPNVIGYLGLLQPLADGLKLF 57
            LTTLLNIIDLVLPLLIAVAYFTLAERKIMAGIQRRKGPNVIGYLGLLQPLADGLKLF
Sbjct:    6 LTTLLNIIDLVLPLLIAVAYFTLAERKIMAGIQRRKGPNVIGYLGLLQPLADGLKLF 62          
BLAST of mRNA_D-herbacea_F_contig1028.384.1 vs. uniprot
Match: A0A344AL68_9PHAE (NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Sargassum yezoense TaxID=127449 RepID=A0A344AL68_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 6.570e-26
Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 0
Query:    1 LTTLLNIIDLVLPLLIAVAYFTLAERKIMAGIQRRKGPNVIGYLGLLQPLADGLKLF 57
            LT LLNIIDLVLPLLIAVAYFTLAERKIMAGIQRRKGPNVIGYLGLLQPLADGLKLF
Sbjct:    6 LTILLNIIDLVLPLLIAVAYFTLAERKIMAGIQRRKGPNVIGYLGLLQPLADGLKLF 62          
BLAST of mRNA_D-herbacea_F_contig1028.384.1 vs. uniprot
Match: A0A1L6KY30_9PHAE (NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Sargassum fluitans TaxID=143163 RepID=A0A1L6KY30_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 7.110e-26
Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 0
Query:    1 LTTLLNIIDLVLPLLIAVAYFTLAERKIMAGIQRRKGPNVIGYLGLLQPLADGLKLF 57
            LT LLNIIDLVLPLLIAVAYFTLAERKIMAGIQRRKGPNVIGYLGLLQPLADGLKLF
Sbjct:    6 LTILLNIIDLVLPLLIAVAYFTLAERKIMAGIQRRKGPNVIGYLGLLQPLADGLKLF 62          
BLAST of mRNA_D-herbacea_F_contig1028.384.1 vs. uniprot
Match: A0A0U1XDI1_9PHAE (NADH-ubiquinone oxidoreductase chain 1 n=34 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U1XDI1_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 1.960e-25
Identity = 54/57 (94.74%), Postives = 56/57 (98.25%), Query Frame = 0
Query:    1 LTTLLNIIDLVLPLLIAVAYFTLAERKIMAGIQRRKGPNVIGYLGLLQPLADGLKLF 57
            LT LLNIIDLVLPLL+AVAYFTLAERKIMAGIQRRKGPNVIGY+GLLQPLADGLKLF
Sbjct:    6 LTILLNIIDLVLPLLVAVAYFTLAERKIMAGIQRRKGPNVIGYMGLLQPLADGLKLF 62          
BLAST of mRNA_D-herbacea_F_contig1028.384.1 vs. uniprot
Match: E6ZEQ7_ECTSI (NADH-ubiquinone oxidoreductase chain 1 n=66 Tax=Phaeophyceae TaxID=2870 RepID=E6ZEQ7_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 7.530e-25
Identity = 53/57 (92.98%), Postives = 56/57 (98.25%), Query Frame = 0
Query:    1 LTTLLNIIDLVLPLLIAVAYFTLAERKIMAGIQRRKGPNVIGYLGLLQPLADGLKLF 57
            LT LLNIIDLV+PLLIAVAYFTLAERKIMAGIQRR+GPNVIGY+GLLQPLADGLKLF
Sbjct:    6 LTILLNIIDLVIPLLIAVAYFTLAERKIMAGIQRRRGPNVIGYMGLLQPLADGLKLF 62          
BLAST of mRNA_D-herbacea_F_contig1028.384.1 vs. uniprot
Match: A0A8E8PDM7_9PHAE (NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8PDM7_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 3.120e-23
Identity = 51/57 (89.47%), Postives = 53/57 (92.98%), Query Frame = 0
Query:    1 LTTLLNIIDLVLPLLIAVAYFTLAERKIMAGIQRRKGPNVIGYLGLLQPLADGLKLF 57
            LT   NIID VLPLLIAVAYFTLAERKIMAGIQRR+GPNVIGY+GLLQPLADGLKLF
Sbjct:    6 LTIFYNIIDFVLPLLIAVAYFTLAERKIMAGIQRRRGPNVIGYMGLLQPLADGLKLF 62          
BLAST of mRNA_D-herbacea_F_contig1028.384.1 vs. uniprot
Match: A0A4Y5T7T0_9PHAE (NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T7T0_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 2.200e-22
Identity = 49/57 (85.96%), Postives = 54/57 (94.74%), Query Frame = 0
Query:    1 LTTLLNIIDLVLPLLIAVAYFTLAERKIMAGIQRRKGPNVIGYLGLLQPLADGLKLF 57
            L T+LNI+ LV+PLLIAVAYFTLAERKIMA IQRR+GPNVIGY+GLLQPLADGLKLF
Sbjct:    4 LLTILNILSLVVPLLIAVAYFTLAERKIMASIQRRRGPNVIGYMGLLQPLADGLKLF 60          
BLAST of mRNA_D-herbacea_F_contig1028.384.1 vs. uniprot
Match: A0A1I9LW81_9PHAE (NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW81_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 3.170e-22
Identity = 46/57 (80.70%), Postives = 54/57 (94.74%), Query Frame = 0
Query:    1 LTTLLNIIDLVLPLLIAVAYFTLAERKIMAGIQRRKGPNVIGYLGLLQPLADGLKLF 57
            L+ ++NI+D+V+PLL+AVAYFTL ERKIM GIQRRKGPNVIGY+GLLQPLADGLKLF
Sbjct:    6 LSLIINILDIVIPLLVAVAYFTLTERKIMGGIQRRKGPNVIGYMGLLQPLADGLKLF 62          
BLAST of mRNA_D-herbacea_F_contig1028.384.1 vs. uniprot
Match: A0A8F0FDG9_9PHAE (NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0FDG9_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 1.700e-21
Identity = 47/55 (85.45%), Postives = 52/55 (94.55%), Query Frame = 0
Query:    3 TLLNIIDLVLPLLIAVAYFTLAERKIMAGIQRRKGPNVIGYLGLLQPLADGLKLF 57
            TL+NII LV+PLLI+VAYFTLAERKIM  IQRR+GPNVIGY+GLLQPLADGLKLF
Sbjct:    9 TLINIISLVVPLLISVAYFTLAERKIMGSIQRRRGPNVIGYMGLLQPLADGLKLF 63          
BLAST of mRNA_D-herbacea_F_contig1028.384.1 vs. uniprot
Match: Q2TUC9_DICDH (NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Dictyota TaxID=2875 RepID=Q2TUC9_DICDH)

HSP 1 Score: 93.2 bits (230), Expect = 2.230e-21
Identity = 46/53 (86.79%), Postives = 51/53 (96.23%), Query Frame = 0
Query:    5 LNIIDLVLPLLIAVAYFTLAERKIMAGIQRRKGPNVIGYLGLLQPLADGLKLF 57
            LNI+ LV+PLLIAVAYFTLAERKIMA IQRR+GPNV+GY+GLLQPLADGLKLF
Sbjct:    6 LNILSLVVPLLIAVAYFTLAERKIMASIQRRRGPNVVGYMGLLQPLADGLKLF 58          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1028.384.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1L2F1J2_9PHAE9.530e-27100.00NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Sar... [more]
A0A344AL68_9PHAE6.570e-2698.25NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Sar... [more]
A0A1L6KY30_9PHAE7.110e-2698.25NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Sar... [more]
A0A0U1XDI1_9PHAE1.960e-2594.74NADH-ubiquinone oxidoreductase chain 1 n=34 Tax=Ph... [more]
E6ZEQ7_ECTSI7.530e-2592.98NADH-ubiquinone oxidoreductase chain 1 n=66 Tax=Ph... [more]
A0A8E8PDM7_9PHAE3.120e-2389.47NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Pha... [more]
A0A4Y5T7T0_9PHAE2.200e-2285.96NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Dic... [more]
A0A1I9LW81_9PHAE3.170e-2280.70NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Ple... [more]
A0A8F0FDG9_9PHAE1.700e-2185.45NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Pro... [more]
Q2TUC9_DICDH2.230e-2186.79NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Dic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HPFAMPF00146NADHdhcoord: 7..57
e-value: 2.5E-16
score: 59.9
IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HPANTHERPTHR11432NADH DEHYDROGENASE SUBUNIT 1coord: 3..57
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..57
NoneNo IPR availableTMHMMTMhelixcoord: 5..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1028contigD-herbacea_F_contig1028:82661..82831 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1028.384.1mRNA_D-herbacea_F_contig1028.384.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1028 82661..82831 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1028.384.1 ID=prot_D-herbacea_F_contig1028.384.1|Name=mRNA_D-herbacea_F_contig1028.384.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=57bp
LTTLLNIIDLVLPLLIAVAYFTLAERKIMAGIQRRKGPNVIGYLGLLQPL
ADGLKLF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001694NADH_UbQ_OxRdtase_su1/FPO