prot_D-herbacea_F_contig1028.381.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-herbacea_F_contig1028.381.1
Unique Name	prot_D-herbacea_F_contig1028.381.1
Type	polypeptide
Organism	Desmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length	137

Homology

[Close]

BLAST of mRNA_D-herbacea_F_contig1028.381.1 vs. uniprot
Match: A0A2R4QQ71_9PHAE (Ribosomal protein L16 n=3 Tax=Fucus TaxID=3011 RepID=A0A2R4QQ71_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 2.030e-90
Identity = 135/136 (99.26%), Postives = 135/136 (99.26%), Query Frame = 0

Query:    1 MLQPKKTKYRKYFKPRILPKILAKTQKLNELNCFALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGANKLPFKVKICKL 136
            MLQPKKTKYRKYFKPRILPKILAKTQKLNELNC ALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGANKLPFKVKICKL
Sbjct:    1 MLQPKKTKYRKYFKPRILPKILAKTQKLNELNCLALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGANKLPFKVKICKL 136

[Close]

BLAST of mRNA_D-herbacea_F_contig1028.381.1 vs. uniprot
Match: A0A1L2F1H6_9PHAE (RpL16 n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1L2F1H6_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 6.050e-65
Identity = 100/132 (75.76%), Postives = 113/132 (85.61%), Query Frame = 0

Query:    3 QPKKTKYRKYFKPRILPKILAKTQKLNELNCFALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGANKLPFKVKIC 134
            QPKKTKYRKYFKPR LPK   KTQKL E +CFALI ++S YINGQQ+EAARQNIRRK+KREGKLEI +LTD  IS KPTAARMGKGKGK+ +WVAS+SAGKP+F LYGI  E G PAL++GANKLP K+KIC
Sbjct:    4 QPKKTKYRKYFKPRSLPKNTTKTQKLAEHSCFALISLESGYINGQQLEAARQNIRRKVKREGKLEIALLTDKAISNKPTAARMGKGKGKVKHWVASISAGKPIFFLYGIDSERGFPALKAGANKLPLKIKIC 135

[Close]

BLAST of mRNA_D-herbacea_F_contig1028.381.1 vs. uniprot
Match: A0A8F0K1B0_9PHAE (Ribosomal protein L16 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0K1B0_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 3.500e-64
Identity = 100/135 (74.07%), Postives = 115/135 (85.19%), Query Frame = 0

Query:    2 LQPKKTKYRKYFKPRILPKILAKTQKLNELNCFALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGANKLPFKVKICKL 136
            +QPKKTKYRKYFKPR LP    +TQ+L ELNCFALI  +S Y+NG+QIEAARQNIRRK+KREGKLEIP+  DIPISRK +AARMGKGKGKI +WVA+L AG+ +FLLYGI  E G+PALQSGANKLP K+KI KL
Sbjct:    3 IQPKKTKYRKYFKPRRLPSNSTQTQRLGELNCFALITTESGYLNGRQIEAARQNIRRKVKREGKLEIPVFPDIPISRKASAARMGKGKGKIDHWVAALPAGRTIFLLYGIDAEQGIPALQSGANKLPLKLKIYKL 137

[Close]

BLAST of mRNA_D-herbacea_F_contig1028.381.1 vs. uniprot
Match: A0A0G2RKU9_TUROR (Ribosomal protein L16 n=1 Tax=Turbinaria ornata TaxID=86657 RepID=A0A0G2RKU9_TUROR)

HSP 1 Score: 196 bits (497), Expect = 3.340e-62
Identity = 96/133 (72.18%), Postives = 113/133 (84.96%), Query Frame = 0

Query:    1 MLQPKKTKYRKYFKPRILPKILAKTQKLNELNCFALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGANKLPFKVKI 133
            +LQPKKTKYRKYFKPR+LPK   K +KLNE NCFALI + S +ING+Q+EAARQNIRRKIKREGKLEI +L D  IS KPT+ARMGKGKGK+H+W+A + AGKP+ LLYGI +E G PAL++GANKLP KVKI
Sbjct:    2 LLQPKKTKYRKYFKPRLLPKTTNKPKKLNEQNCFALISLASGHINGRQLEAARQNIRRKIKREGKLEIVLLPDKAISNKPTSARMGKGKGKVHHWIAPIPAGKPILLLYGIDKERGFPALKAGANKLPLKVKI 134

[Close]

BLAST of mRNA_D-herbacea_F_contig1028.381.1 vs. uniprot
Match: A0A1L6KXZ3_9PHAE (Ribosomal protein L16 n=11 Tax=Sargassaceae TaxID=3014 RepID=A0A1L6KXZ3_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 1.360e-61
Identity = 94/133 (70.68%), Postives = 115/133 (86.47%), Query Frame = 0

Query:    1 MLQPKKTKYRKYFKPRILPKILAKTQKLNELNCFALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGANKLPFKVKI 133
            +LQPKKTKY+KYFKPR+LP++  KTQKLNE NCFA+I ++S YI+ +Q+EAARQNIRRKIKREGKLEI  L D  IS KPT+ARMGKGKGK+++WVA +SAGKP+ LLYGI +E G PAL++GANKLP K+KI
Sbjct:    2 LLQPKKTKYKKYFKPRLLPRVTTKTQKLNEQNCFAIISLESGYIDVRQLEAARQNIRRKIKREGKLEIIPLADKAISNKPTSARMGKGKGKVNHWVAPISAGKPILLLYGIDKEQGFPALKAGANKLPLKIKI 134

[Close]

BLAST of mRNA_D-herbacea_F_contig1028.381.1 vs. uniprot
Match: A0A089N0Z2_PETFA (Ribosomal protein L16 n=4 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A089N0Z2_PETFA)

HSP 1 Score: 193 bits (491), Expect = 2.740e-61
Identity = 97/136 (71.32%), Postives = 116/136 (85.29%), Query Frame = 0

Query:    1 MLQPKKTKYRKYFKPRILPKILAKTQKLNELNCFALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGANKLPFKVKICKL 136
            ++QPKKTKYRKYFKPR LPK   KTQKL ELN FALI ++S ++NG+QIEAARQNIRRK+KREGKLEI +  DI ISRK +AARMGKGKGK+ +WVA+LSAG+ +FLLYG+  E G+PAL+SGANKLP K+KI KL
Sbjct:    2 LIQPKKTKYRKYFKPRGLPKSSTKTQKLKELNYFALIAMESGFLNGKQIEAARQNIRRKVKREGKLEILVFPDIAISRKASAARMGKGKGKVDHWVAALSAGRTVFLLYGVDAEQGIPALRSGANKLPMKLKIYKL 137

[Close]

BLAST of mRNA_D-herbacea_F_contig1028.381.1 vs. uniprot
Match: A0A0U2M402_9PHAE (Ribosomal protein L16 n=18 Tax=Laminariales TaxID=2886 RepID=A0A0U2M402_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 3.650e-61
Identity = 98/135 (72.59%), Postives = 113/135 (83.70%), Query Frame = 0

Query:    2 LQPKKTKYRKYFKPRILPKILAKTQKLNELNCFALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGANKLPFKVKICKL 136
            +QPKKTKYRKYFKPR LP    KT KL ELNCFA+I ++S Y+NG+QIEAARQNIRRK+KREGKLEI I  DI ISRK +AARMGKGKGK+ +W+AS+SAG+ LFLLYGI  E G+PAL SGANKLP KVKI +L
Sbjct:    1 MQPKKTKYRKYFKPRGLPNTSTKTHKLTELNCFAVILMESGYLNGRQIEAARQNIRRKVKREGKLEILIFPDIAISRKASAARMGKGKGKVDHWIASVSAGQNLFLLYGIDAEQGIPALHSGANKLPLKVKIYQL 135

[Close]

BLAST of mRNA_D-herbacea_F_contig1028.381.1 vs. uniprot
Match: A0A3S8PYI0_9PHAE (Ribosomal protein L16 n=5 Tax=Sargassum TaxID=3015 RepID=A0A3S8PYI0_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 5.530e-61
Identity = 94/136 (69.12%), Postives = 114/136 (83.82%), Query Frame = 0

Query:    1 MLQPKKTKYRKYFKPRILPKILAKTQKLNELNCFALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGANKLPFKVKICKL 136
            +LQPK+TKY+KYFKPR LPKI  K QKLNE NCFA+I ++S Y+N +Q+EAARQNIRRKIKREGKLEI  L D  IS KPT+ARMGKGKGK+++W+A +  GKP+FLLYGI +E GLPAL++GANKLP K+KI  L
Sbjct:    2 LLQPKRTKYKKYFKPRSLPKITTKAQKLNEQNCFAIISLESGYLNVKQLEAARQNIRRKIKREGKLEIVPLADKTISNKPTSARMGKGKGKVNHWIAPILVGKPIFLLYGIDKEQGLPALKAGANKLPLKIKIRNL 137

[Close]

BLAST of mRNA_D-herbacea_F_contig1028.381.1 vs. uniprot
Match: A0A068LH27_9PHAE (Ribosomal protein L16 n=3 Tax=Sargassum TaxID=3015 RepID=A0A068LH27_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 7.850e-61
Identity = 97/136 (71.32%), Postives = 114/136 (83.82%), Query Frame = 0

Query:    1 MLQPKKTKYRKYFKPRILPKILAKTQKLNELNCFALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGANKLPFKVKICKL 136
            +LQPKKTKY+KYFKPR LPKI  KTQKL+E  CFA+I ++S YIN QQ+EAARQNIRRKIKREGKLEI  L D  IS KPT+ARMGKGKGK+++WVA + AGKPL LL+GI +E GLPAL++GANKLP K+KI  L
Sbjct:    2 LLQPKKTKYKKYFKPRALPKITTKTQKLSEPGCFAIISLESGYINVQQLEAARQNIRRKIKREGKLEILPLADKAISNKPTSARMGKGKGKVNHWVAPILAGKPLLLLHGINKEQGLPALKAGANKLPLKIKILDL 137

[Close]

BLAST of mRNA_D-herbacea_F_contig1028.381.1 vs. uniprot
Match: F8UWL8_9PHAE (Ribosomal protein L16 n=20 Tax=Saccharina TaxID=309357 RepID=F8UWL8_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 2.990e-60
Identity = 96/135 (71.11%), Postives = 112/135 (82.96%), Query Frame = 0

Query:    2 LQPKKTKYRKYFKPRILPKILAKTQKLNELNCFALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGANKLPFKVKICKL 136
            +QPKKTKYRKYFKPR LP    KT KL EL CFA+I + S Y+NG+QIE+ARQNIRRK+KREGKLEI I  DI ISRK +AARMGKGKGK+ +W+AS+SAG+ LFLLYGI +E G+PAL SGANKLP KVKI +L
Sbjct:    1 MQPKKTKYRKYFKPRGLPNTSGKTHKLTELTCFAVIAMGSGYLNGRQIESARQNIRRKVKREGKLEILIFPDIAISRKASAARMGKGKGKVDHWIASISAGQTLFLLYGIDDEQGIPALHSGANKLPLKVKIYQL 135

The following BLAST results are available for this feature:

BLAST of mRNA_D-herbacea_F_contig1028.381.1 vs. uniprot

BLAST of mRNA_D-herbacea_F_contig1028.381.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2R4QQ71_9PHAE	2.030e-90	99.26	Ribosomal protein L16 n=3 Tax=Fucus TaxID=3011 Rep...	[more]
A0A1L2F1H6_9PHAE	6.050e-65	75.76	RpL16 n=1 Tax=Coccophora langsdorfii TaxID=74099 R...	[more]
A0A8F0K1B0_9PHAE	3.500e-64	74.07	Ribosomal protein L16 n=1 Tax=Analipus japonicus T...	[more]
A0A0G2RKU9_TUROR	3.340e-62	72.18	Ribosomal protein L16 n=1 Tax=Turbinaria ornata Ta...	[more]
A0A1L6KXZ3_9PHAE	1.360e-61	70.68	Ribosomal protein L16 n=11 Tax=Sargassaceae TaxID=...	[more]
A0A089N0Z2_PETFA	2.740e-61	71.32	Ribosomal protein L16 n=4 Tax=Scytosiphonaceae Tax...	[more]
A0A0U2M402_9PHAE	3.650e-61	72.59	Ribosomal protein L16 n=18 Tax=Laminariales TaxID=...	[more]
A0A3S8PYI0_9PHAE	5.530e-61	69.12	Ribosomal protein L16 n=5 Tax=Sargassum TaxID=3015...	[more]
A0A068LH27_9PHAE	7.850e-61	71.32	Ribosomal protein L16 n=3 Tax=Sargassum TaxID=3015...	[more]
F8UWL8_9PHAE	2.990e-60	71.11	Ribosomal protein L16 n=20 Tax=Saccharina TaxID=30...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000114	Ribosomal protein L16	PRINTS	PR00060	RIBOSOMALL16	coord: 90..119 score: 31.47 coord: 60..89 score: 45.73 coord: 44..55 score: 48.33
IPR000114	Ribosomal protein L16	TIGRFAM	TIGR01164	TIGR01164	coord: 2..128 e-value: 3.2E-29 score: 99.6
IPR000114	Ribosomal protein L16	PANTHER	PTHR12220	50S/60S RIBOSOMAL PROTEIN L16	coord: 1..134
IPR036920	Ribosomal protein L10e/L16 superfamily	GENE3D	3.90.1170.10		coord: 1..136 e-value: 1.1E-33 score: 118.6
IPR036920	Ribosomal protein L10e/L16 superfamily	SUPERFAMILY	54686	Ribosomal protein L16p/L10e	coord: 1..134
IPR016180	Ribosomal protein L10e/L16	PFAM	PF00252	Ribosomal_L16	coord: 4..133 e-value: 1.7E-27 score: 96.0
None	No IPR available	PANTHER	PTHR12220:SF13	39S RIBOSOMAL PROTEIN L16, MITOCHONDRIAL	coord: 1..134
IPR020798	Ribosomal protein L16, conserved site	PROSITE	PS00701	RIBOSOMAL_L16_2	coord: 84..95

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-herbacea_F_contig1028	contig	D-herbacea_F_contig1028:79457..79867 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female	2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90	2022-09-16
OGS1.0 of Desmarestia herbacea DmunF female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-herbacea_F_contig1028.381.1	mRNA_D-herbacea_F_contig1028.381.1	Desmarestia herbacea DmunF female	mRNA	D-herbacea_F_contig1028 79454..79867 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-herbacea_F_contig1028.381.1 ID=prot_D-herbacea_F_contig1028.381.1|Name=mRNA_D-herbacea_F_contig1028.381.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=137bp
MLQPKKTKYRKYFKPRILPKILAKTQKLNELNCFALIPIQSVYINGQQIE
AARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLS
AGKPLFLLYGIIEEVGLPALQSGANKLPFKVKICKL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020798	Ribosomal_L16_CS
IPR016180	Ribosomal_L10e/L16
IPR036920	Ribosomal_L10e/L16_sf
IPR000114	Ribosomal_L16