prot_D-herbacea_F_contig102.348.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig102.348.1
Unique Nameprot_D-herbacea_F_contig102.348.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length129
Homology
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BLAST of mRNA_D-herbacea_F_contig102.348.1 vs. uniprot
Match: A0A6H5KUE2_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUE2_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 1.700e-17
Identity = 40/55 (72.73%), Postives = 46/55 (83.64%), Query Frame = 0 
Query:   12 SGLGILLDGFFRSAELNLRCERCDHDRVRAEYALAELPGTLILHIKRFKPVVMPP 66
            S LG LLD FF+ +EL+LRCERC HDRVRAE++LAELPG L+LHIKRFKPV   P
Sbjct:  809 SELGDLLDNFFQPSELSLRCERCGHDRVRAEHSLAELPGALVLHIKRFKPVASAP 863
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BLAST of mRNA_D-herbacea_F_contig102.348.1 vs. uniprot
Match: D7G2P5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P5_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 1.720e-17
Identity = 38/50 (76.00%), Postives = 45/50 (90.00%), Query Frame = 0 
Query:   12 SGLGILLDGFFRSAELNLRCERCDHDRVRAEYALAELPGTLILHIKRFKP 61
            SGLG LLD FF+ +EL+LRCERC HDRVRAE++LAELPG L+LH+KRFKP
Sbjct:  711 SGLGDLLDSFFQPSELSLRCERCGHDRVRAEHSLAELPGALVLHVKRFKP 760
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig102.348.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KUE2_9PHAE1.700e-1772.73USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G2P5_ECTSI1.720e-1776.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 17..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig102contigD-herbacea_F_contig102:373022..373683 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig102.348.1mRNA_D-herbacea_F_contig102.348.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig102 373021..373683 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig102.348.1 ID=prot_D-herbacea_F_contig102.348.1|Name=mRNA_D-herbacea_F_contig102.348.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=129bp
IPEEAEGGKDASGLGILLDGFFRSAELNLRCERCDHDRVRAEYALAELPG
TLILHIKRFKPVVMPPVIAKTSTPLGATATTPLPVVTPRLSPSGSTPRPA
ANHLAGSPSVSCATPSGEGSAGPGVAASG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain-like_cys_pep_sf