prot_D-herbacea_F_contig100.248.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig100.248.1
Unique Nameprot_D-herbacea_F_contig100.248.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length336
Homology
BLAST of mRNA_D-herbacea_F_contig100.248.1 vs. uniprot
Match: D7FHY1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHY1_ECTSI)

HSP 1 Score: 428 bits (1101), Expect = 6.750e-148
Identity = 236/335 (70.45%), Postives = 266/335 (79.40%), Query Frame = 0
Query:    1 MAGRSSRRGGGG-AGIQALVEQKLADGLQYEALQLYRGVVSRKSARGQDDAAMSIAEQGMGVLLGKGYADSATELGNVLVDILTDHELVPNEERVARIKRVNDMYEDAKQAAMLSNKDRPTAAGEQGSGXXXXXXXEVDGERSGDGKST-RGMHSIGTLQGRFLKLAVNWAASRGQRLSGDPELCALLGRCLWNEGDLERGTRYLVLGERPLELLDLISRDVSAGSARNLAVTKGVLQFASKASLRDANALLTAYKVSLGFGPPT-GLISFCVLLLKTCEYDAAPVFQKLLEHFRAELSVDAALFGFVETIAMVYFGIRLRPPSMLDNIMGMFGG 332
            MAGRSSR GG     IQ LVEQKL +GLQYEALQLYRGVVSRKSARG D+AA++IAEQG+GVLL +GYADSATELGNVLV IL DHEL   EER+   +RVN  YEDAK+AA+L+ +DR TAA ++G G       EV+     +GK   RGM+S+G LQGRFLKLAV W A+RGQRLSGDP LC LLGRCLWNEGDLERGTRYLVLGERP EL DLI +DVS  +AR LAV KGVLQFASKASLRDANALL AYK   G   PT G++ FC +LLKTCEYDA PVFQKLL+ ++A+LS D ALFG VE+IAM YF +RLRPPSMLDNIMGM GG
Sbjct:    1 MAGRSSRSGGNSNERIQLLVEQKLGEGLQYEALQLYRGVVSRKSARGNDNAALTIAEQGIGVLLARGYADSATELGNVLVGILNDHELPVTEERLELFRRVNAKYEDAKRAAVLAEEDRRTAA-QEGQGGVG----EVE-----EGKEAGRGMYSVGVLQGRFLKLAVAWTAARGQRLSGDPGLCGLLGRCLWNEGDLERGTRYLVLGERPQELCDLILQDVSDANARELAVAKGVLQFASKASLRDANALLAAYKTQTGGKQPTKGVLGFCAMLLKTCEYDATPVFQKLLDAYQADLSKDEALFGSVESIAMTYFNLRLRPPSMLDNIMGMLGG 325          
BLAST of mRNA_D-herbacea_F_contig100.248.1 vs. uniprot
Match: A0A835ZB05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB05_9STRA)

HSP 1 Score: 190 bits (482), Expect = 1.120e-54
Identity = 135/337 (40.06%), Postives = 192/337 (56.97%), Query Frame = 0
Query:    1 MAGRSSRRGGGGAG--IQALVEQKLADGLQYEALQLYRGVVSRKSARGQDDAAMSIAEQGMGVLLGKGYADSATELGNVLVDILTDHELVPNEERVARIKRVNDMYEDAKQAAMLSNKDRPTAAGEQGSGXXXXXXXEVDGERSGDGKSTRGMHSIGT---LQGRFLKLAVNWAASRGQRLSGDPELCALLGRCLWNEGDLERGTRYLVLGERPLELLDLISRDVSAGSARNLAVTKGVLQFASKASLRDANALLTAYKVSLGFGPPTG-LISFCVLLLKTCEYDAAPVFQKLLEHFRAELSVDAALFGFVETIAMVYFGIRLRPPSMLDNIMGMFG 331
            +AGRS+RR G GA   ++A+VE+KL  GL+YEALQLYRG  +RK+ARG  D+A ++AE G  VL+ +G+ADSA+EL   LV+I  ++     +ER+ RI+R++ +Y++      ++NK      G+              G  +G  ++ +  H + +   LQ +FLK AV W A+ G R +GD  L AL GRCL+  G+ E GT  +V GE+P+EL  L+                GVL F +  +LRDANA   A++ +       G    F  LL  TCE DAAP+FQ+L E  RA  S D A+   +  I  V+F I L PPSMLD+I+ M G
Sbjct:    5 LAGRSTRRQGNGAAERVKAMVEEKLDAGLEYEALQLYRGQAARKAARGDFDSAAAMAETGAQVLMQRGFADSASELSRQLVEIYKENGCDVTQERLDRIQRLDALYQE------VANKGPGELKGK--------------GSEAGIAQARQVRHPVQSGFELQAKFLKAAVAWTAAAGPRPAGDAALNALPGRCLFAMGNAEAGTSRMVAGEQPIELRLLMM---------------GVLHFLALGNLRDANAQRAAWEAAAAPERARGGAQQFVRLLCATCERDAAPLFQRLAEAMRA--SGDPAVEKHLAQIGRVFFSI-LPPPSMLDSILKMMG 303          
BLAST of mRNA_D-herbacea_F_contig100.248.1 vs. uniprot
Match: D7G1P9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1P9_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 3.900e-37
Identity = 72/98 (73.47%), Postives = 78/98 (79.59%), Query Frame = 0
Query:  158 QGRFLKLAVNWAASRGQRLSGDPELCALLGRCLWNEGDLERGTRYLVLGERPLELLDLISRDVSAGSARNLAVTKGVLQFASKASLRDANALLTAYKV 255
            QGRFLKLAV W  +RGQRL  D  LC L+GRCLWNEG+LERGTRY VLGERP EL DLI +DVS  +AR LAV KGVLQFA K SLRDANALL A K+
Sbjct:   10 QGRFLKLAVAWTTARGQRLRDDSGLCGLVGRCLWNEGELERGTRYHVLGERPQELCDLILQDVSDANARKLAVGKGVLQFARKRSLRDANALLAANKM 107          
BLAST of mRNA_D-herbacea_F_contig100.248.1 vs. uniprot
Match: A0A2T6ZEC8_TUBBO (Uncharacterized protein n=1 Tax=Tuber borchii TaxID=42251 RepID=A0A2T6ZEC8_TUBBO)

HSP 1 Score: 75.1 bits (183), Expect = 1.370e-11
Identity = 83/344 (24.13%), Postives = 132/344 (38.37%), Query Frame = 0
Query:   16 QALVEQKLADGLQYEALQLYRGVVSRKSARGQDDAAMSIAEQGMGVLLGKGYADSATELGNVLVDILTDHELVPNEERVARIKRVNDMYEDAKQAAMLSNKDRPTAAGEQGSGXXXXXXXEVDGERSGDGKSTRGMHSIGTLQGRFLKLAVNWAASRGQRLSGDPELCALLGRCLWNEGDLERGTRYLVLG-ERPLELLDLISRDVSAGSARNLA---VTKGVLQFASKASLRDANALLTAY-------------------KVSLGFGPPTGLISFCVLLLKTCEYDAAPVFQKLLEHFRAELSVDAALFGFVETIAMVYFGIRLRPPSMLDNIMG-MFGGASN 335
            +A +E+K+ +G  YEA Q  R V  R       DAA+ I   G   LL  G   S  +L  +LV++     + P+    AR+           Q   L + + P+                                       RF+   + W+A  G+  +GDPEL   +G  L  E +     ++LV+G +   E+   +  D       + A     + V  +    +LRDA  LL  +                    V +   P   L++F  LLL  C+     +F+ L  H+   L         +E I  +YFGI++R P+ + ++MG MFGGA N
Sbjct:   10 RARLEKKIQEGAYYEAHQQLRVVSQRYIKAHNYDAAIDILCSGAEALLKAGQGGSGCDLCLMLVEVYKAGSVTPSATSRARLI----------QLISLISPEEPSRK-------------------------------------RFINEVIAWSAKHGEYPAGDPELHHFIGTLLAQEDNTYEAEKHLVVGIKESTEIFSDMLYDWYTEDEPHTAPIYAARAVFPYLLIGNLRDATRLLAMFTRKLIENSTSLAIQEVQTASVDVKVIPSLPLLNFLNLLLLACQTGGQDMFRTLKSHYSNNLKEAPHWDEALEQIGEIYFGIQVRRPASIFDMMGSMFGGAPN 306          
BLAST of mRNA_D-herbacea_F_contig100.248.1 vs. uniprot
Match: A0A5J5F4B7_9PEZI (Uncharacterized protein n=1 Tax=Sphaerosporella brunnea TaxID=1250544 RepID=A0A5J5F4B7_9PEZI)

HSP 1 Score: 73.2 bits (178), Expect = 6.110e-11
Identity = 84/345 (24.35%), Postives = 136/345 (39.42%), Query Frame = 0
Query:   16 QALVEQKLADGLQYEALQLYRGVVSRKSARGQDDAAMSIAEQGMGVLLGKGYADSATELGNVLVDILTDHELVPNEERVARIKRVNDMYEDAKQAAMLSNKDRPTAAGEQGSGXXXXXXXEVDGERSGDGKSTRGMHSIGTLQGRFLKLAVNWAASRGQRLSGDPELCALLGRCLWNEGDLERGTRYLVLGERPLELLDLISR--------DVSAGSARNLAVTKGVLQFASKASLRDANALLTAY-------------------KVSLGFGPPTGLISFCVLLLKTCEYDAAPVFQKLLEHFRAELSVDAALFGFVETIAMVYFGIRLRPPSMLDNIMG-MFGG 332
            +A +++++ +G  YEA Q  R V  R    G  ++A+ I   G   LL  G   S  +L  +LVD+    +L P+    AR+  +  M      A   S K                                           RF+  A+ W A  G+  +GDPEL    G     E ++    ++L+LG +  E  D+++R        +    +A N  + + VL      +LRDAN  L  +                      +   P   L++F  LL    +   A VF+ L  H+ ++L    A    +E I  +YFGI++R P+ + ++MG MFGG
Sbjct:   10 RARLQKRIEEGQYYEAHQQLRVVSQRYIKIGDYNSAIEILSSGAQALLKAGQTGSGGDLCLLLVDVYRTAKLTPDAASKARLVELITMMP----AEEPSRK-------------------------------------------RFINEAIAWTAKFGEFPAGDPELHHFAGNLYAQEDEVYEAEKHLILGTK--ESADVLARMLYDWYKENPEVHTAPNY-IARAVLPCLLIGNLRDANRSLDLFIQQLIQDNSTLVVQEVQSASADVRIFPSLPLLNFLSLLRLGVQTGGADVFRNLKSHYASQLREVPAWDDALEQIGEMYFGIQIRRPTNILDMMGSMFGG 304          
BLAST of mRNA_D-herbacea_F_contig100.248.1 vs. uniprot
Match: A0A6U2WP65_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U2WP65_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.420e-8
Identity = 79/351 (22.51%), Postives = 139/351 (39.60%), Query Frame = 0
Query:   18 LVEQKLADGLQYEALQLYRGVVSRKSARGQDDAAMSIAEQGMGVLLGKGYADSATELGNVLVDILTDHELVPNEERVARIKRVNDMYEDAKQAAMLSNKDRPTAAGEQGSGXXXXXXXEVDGERSGDGKSTRGMHSIGTLQGRFLKLAVNWAASRGQRLSGDPELCALLGRCLWNEGDLERGT-----------RYLVLGERPLELLDLISR------------DVSAGSARNLAVTKGVLQFASKASLRDANALLTAY-----------------KVSLGFGPPTGLISFCVLLLKTCEYDA--APVFQKLLEHFRAELSV---DAALFGFVETIAMVYFGIRLRPPSML 323
            L E+++ +   YEALQL +  V +K   G    A ++A +G   LL K     A++L ++LV++L +     +++ V+R+  +++ Y  A                                    DG +      +  L+  +L    NW++  G    G   L  +L    W    +E+ T           +++ L E+P +++  +                 A + R+  +T+ +L  A+  +LRDAN LL  Y                 K   G  P    + F  +LL+ CE D    P++  L+  F+ E+      AA+ G+   I   YF I+  PPSM+
Sbjct:   32 LSEEEMDEPTAYEALQLAQSQVRKKYHAGDFGGATTLAYEGSLALLKKKRVSVASQLMDLLVEVLRETHTSDSDDWVSRLVEIHNSYVSAM-----------------------------------DGLAGTEATRLHRLERDWLLKCTNWSSDLGTIKFGSNRLQEVLAEQCWTLSLVEQETEEILDLQCDAVQHMCLAEQPDKIVAWLKTLPAPTEEETRTGHTCAPAVRDALLTRSLLLLAAMENLRDANKLLRGYIDTVEERNIKELAASYTKKDDGLAPSH--VIFGCMLLRICEKDTRTGPLYSWLMRSFKREIERLYNPAAVLGYTTKIGKQYFNIQ-PPPSMM 344          
BLAST of mRNA_D-herbacea_F_contig100.248.1 vs. uniprot
Match: A0A0N5ARC5_9BILA (Uncharacterized protein n=1 Tax=Syphacia muris TaxID=451379 RepID=A0A0N5ARC5_9BILA)

HSP 1 Score: 65.1 bits (157), Expect = 4.080e-8
Identity = 77/335 (22.99%), Postives = 139/335 (41.49%), Query Frame = 0
Query:   19 VEQKLADGLQ----YEALQLYRGVVSRKSARGQDDAAMSIAEQGMGVLLGKGYADSATELGNVLVDILTDHELVPNEERVARIKRVNDMYEDAKQAAMLSNKDRPTAAGEQGSGXXXXXXXEVDGERSGDGKSTRGMHSIGTLQGRFLKLAVNWAASRGQRL----SGDPELCALLGRCLWNEGDLERGTRYLVLGERPLE----LLDLISRDVSAGSARNLAVTKGVLQFASKASLRDANALLTAY---KVSLGFGPPTG--LISFCVLLLKTCEYDAAPVFQKLLEHFRAELSVDAALFGFVETIAMVYFGIRL--RPPSMLDNIMGMFGGAS 334
            +E++++D  +    YEA QLYR +  R S   + D    I   G+  L+     +SA +LG + ++++T  E   N E + + +++          ++   K+R     +QG+                D KS            RFL  AV W+ S  ++      G  +L   + + LWN GD      + +L + P E    L+D   +D   G+ ++L   + VLQ       R A+ +L  Y     S+   PP    L++F   L+         +F +L+E +  +   D +   +++ I  VY G+    +    L N++    G+S
Sbjct:    7 LEKRISDCFENTNYYEAHQLYRTLYFRLSTHQEWDELQRILCDGILKLVEVNEHESAIDLGELYIEVMTKAETPVNSESLEKFEKLF--------TSLFPKKERNENQWKQGT----------------DQKS------------RFLAQAVKWSMSVSEKKRYKQKGHADLHGCIAKVLWNNGDYGGARNHFMLSDEPEEFAKFLVDYQQKD-GCGNEKDLFAVQAVLQLLCNRRPRTASLVLVNYCKDHPSISDKPPYNFPLLNFARYLILVIRAKKVEMFTRLIETY--DFHRDPSFTRYLDKIGQVYLGVPAPQKQSDFLGNLLKGLVGSS 302          
BLAST of mRNA_D-herbacea_F_contig100.248.1 vs. uniprot
Match: A0A060TD77_BLAAD (ARAD1D48708p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060TD77_BLAAD)

HSP 1 Score: 59.3 bits (142), Expect = 2.380e-6
Identity = 55/184 (29.89%), Postives = 83/184 (45.11%), Query Frame = 0
Query:  168 WAASRGQRLSGDPELCALLGRCLWNEGDLERGTRYLVLGER--PLELLDLI---SRDVSAGSARNLAVTKGVLQFASKASLRDANALLTAY-----------------KVSLGFGPPTGLISFCVLLLKTCEYDAAPVFQKLLEHFRAELSVDAALFGFVETIAMVYFGIRL-RPPSMLDNIMG 328
            WA+  GQ   GDPEL  +LG       +     +YL+LG R  P  L  L+   S++ S      L  ++GVL +    ++RD+ ALL  +                 K SL    P  L++F  LL+ +C+Y  A +F +L   +  +L    A    +  I   YFGI   R  +ML ++MG
Sbjct:  113 WASQYGQYKYGDPELNHILGSIFARADEAYEAEKYLLLGTRDSPKVLAKLLFEWSQEDSNSHTLPLYASRGVLGYLCIGNIRDSKALLDEFISQCPSEWYTTVEQQGEKASLFKDYP--LMTFLQLLVLSCQYKNADMFNRLKTRYSDKLQDVQAFNVPLARIGRDYFGIEPPRQHNMLQDLMG 294          
BLAST of mRNA_D-herbacea_F_contig100.248.1 vs. uniprot
Match: A0A821R9L5_9NEOP (Hypothetical protein n=7 Tax=Pieris TaxID=7115 RepID=A0A821R9L5_9NEOP)

HSP 1 Score: 56.6 bits (135), Expect = 2.030e-5
Identity = 84/335 (25.07%), Postives = 126/335 (37.61%), Query Frame = 0
Query:    8 RGGGGAG-IQALVEQKLADGLQYEALQLYRGVVSRKSARGQDDAAMSIAEQGMGVLLGKGYADSATELGNVLVDILTDHELVPNEERVARIKRVNDMYEDAKQAAMLSNKDRPTAAGEQGSGXXXXXXXEVDGERSGDGKSTRGMHSIGTLQGRFLKLAVNWAASRGQRLSGDPELCALLGRCLWNEGDLERGTRYLVLGERPLELLD-LISRDVSAGSARNLA--VTKGVLQFA---SKASLRDANALLTAYKVSLGFGPPT---GLISFCVLLLKTCEYDAAPVFQKLLEHFRAELSVDAALFGFVETIAMVYFGI-----RLRPPSMLDNIM 327
            RG  G G +   +E  +  G  YEA Q+YR +  R   + +    + +   G  +LL      S T+L  +L+D+LT   + P EE + +I             A L  K +P                    ER                   FL  AV W+  + +R  G P L   +    W E  L    R+ +     +     LI    + G    +A  + + VLQ     +K    +A    T    +L    P     L++F  LLLK  +   A  F  L + +   L  D   FG+++TIA V+FGI     R  P SML  I+
Sbjct:    3 RGERGVGRVLEKLEASVNAGQYYEAHQMYRTLYFRYLNQKKYGDLLQLLHSGANILLECDQQGSGTDLAILLLDVLTKSHINPCEEWIEKI-------------AQLFAKMKPNVV-----------------ERE-----------------TFLINAVKWSMDKTKR--GHPLLHKSIAEVYWQENKLTYAYRHFLHSNDGVAFATKLIELHTTKGYKSEIAMFIAQAVLQILCLKNKEMAHEAFKEYTRSHPNLNERVPPFQYPLLNFLYLLLKVIDQKNAMKFLMLRKSYEKFLKRDPRYFGYLDTIARVWFGISAPGNRRNPNSMLGGII 288          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig100.248.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FHY1_ECTSI6.750e-14870.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZB05_9STRA1.120e-5440.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G1P9_ECTSI3.900e-3773.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2T6ZEC8_TUBBO1.370e-1124.13Uncharacterized protein n=1 Tax=Tuber borchii TaxI... [more]
A0A5J5F4B7_9PEZI6.110e-1124.35Uncharacterized protein n=1 Tax=Sphaerosporella br... [more]
A0A6U2WP65_9STRA2.420e-822.51Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A0N5ARC5_9BILA4.080e-822.99Uncharacterized protein n=1 Tax=Syphacia muris Tax... [more]
A0A060TD77_BLAAD2.380e-629.89ARAD1D48708p n=1 Tax=Blastobotrys adeninivorans Ta... [more]
A0A821R9L5_9NEOP2.030e-525.07Hypothetical protein n=7 Tax=Pieris TaxID=7115 Rep... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 132..332
e-value: 4.5E-25
score: 90.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 14..116
e-value: 2.7E-12
score: 48.7
IPR007317Golgi to ER traffic protein 4PFAMPF04190DUF410coord: 47..330
e-value: 5.3E-36
score: 124.7
IPR007317Golgi to ER traffic protein 4PANTHERPTHR12875UNCHARACTERIZEDcoord: 19..330
NoneNo IPR availablePANTHERPTHR12875:SF0GOLGI TO ER TRAFFIC PROTEIN 4 HOMOLOGcoord: 19..330
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 316..335
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 295..315
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig100contigD-herbacea_F_contig100:775264..779296 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig100.248.1mRNA_D-herbacea_F_contig100.248.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig100 775178..781833 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig100.248.1 ID=prot_D-herbacea_F_contig100.248.1|Name=mRNA_D-herbacea_F_contig100.248.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=336bp
MAGRSSRRGGGGAGIQALVEQKLADGLQYEALQLYRGVVSRKSARGQDDA
AMSIAEQGMGVLLGKGYADSATELGNVLVDILTDHELVPNEERVARIKRV
NDMYEDAKQAAMLSNKDRPTAAGEQGSGGGNEEEEEVDGERSGDGKSTRG
MHSIGTLQGRFLKLAVNWAASRGQRLSGDPELCALLGRCLWNEGDLERGT
RYLVLGERPLELLDLISRDVSAGSARNLAVTKGVLQFASKASLRDANALL
TAYKVSLGFGPPTGLISFCVLLLKTCEYDAAPVFQKLLEHFRAELSVDAA
LFGFVETIAMVYFGIRLRPPSMLDNIMGMFGGASN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007317GET4
IPR011990TPR-like_helical_dom_sf