mRNA_D-herbacea_F_contig100.248.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig100.248.1
Unique NamemRNA_D-herbacea_F_contig100.248.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
BLAST of mRNA_D-herbacea_F_contig100.248.1 vs. uniprot
Match: D7FHY1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHY1_ECTSI)

HSP 1 Score: 428 bits (1101), Expect = 2.220e-139
Identity = 236/335 (70.45%), Postives = 266/335 (79.40%), Query Frame = 3
Query:   87 MAGRSSRRGGGG-AGIQALVEQKLADGLQYEALQLYRGVVSRKSARGQDDAAMSIAEQGMGVLLGKGYADSATELGNVLVDILTDHELVPNEERVARIKRVNDMYEDAKQAAMLSNKDRPTAAGEQGSGXXXXXXXEVDGERSGDGKST-RGMHSIGTLQGRFLKLAVNWAASRGQRLSGDPELCALLGRCLWNEGDLERGTRYLVLGERPLELLDLISRDVSAGSARNLAVTKGVLQFASKASLRDANALLTAYKVSLGFGPPT-GLISFCVLLLKTCEYDAAPVFQKLLEHFRAELSVDAALFGFVETIAMVYFGIRLRPPSMLDNIMGMFGG 1082
            MAGRSSR GG     IQ LVEQKL +GLQYEALQLYRGVVSRKSARG D+AA++IAEQG+GVLL +GYADSATELGNVLV IL DHEL   EER+   +RVN  YEDAK+AA+L+ +DR TAA ++G G       EV+     +GK   RGM+S+G LQGRFLKLAV W A+RGQRLSGDP LC LLGRCLWNEGDLERGTRYLVLGERP EL DLI +DVS  +AR LAV KGVLQFASKASLRDANALL AYK   G   PT G++ FC +LLKTCEYDA PVFQKLL+ ++A+LS D ALFG VE+IAM YF +RLRPPSMLDNIMGM GG
Sbjct:    1 MAGRSSRSGGNSNERIQLLVEQKLGEGLQYEALQLYRGVVSRKSARGNDNAALTIAEQGIGVLLARGYADSATELGNVLVGILNDHELPVTEERLELFRRVNAKYEDAKRAAVLAEEDRRTAA-QEGQGGVG----EVE-----EGKEAGRGMYSVGVLQGRFLKLAVAWTAARGQRLSGDPGLCGLLGRCLWNEGDLERGTRYLVLGERPQELCDLILQDVSDANARELAVAKGVLQFASKASLRDANALLAAYKTQTGGKQPTKGVLGFCAMLLKTCEYDATPVFQKLLDAYQADLSKDEALFGSVESIAMTYFNLRLRPPSMLDNIMGMLGG 325          
BLAST of mRNA_D-herbacea_F_contig100.248.1 vs. uniprot
Match: A0A835ZB05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB05_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.660e-50
Identity = 135/338 (39.94%), Postives = 193/338 (57.10%), Query Frame = 3
Query:   84 SMAGRSSRRGGGGAG--IQALVEQKLADGLQYEALQLYRGVVSRKSARGQDDAAMSIAEQGMGVLLGKGYADSATELGNVLVDILTDHELVPNEERVARIKRVNDMYEDAKQAAMLSNKDRPTAAGEQGSGXXXXXXXEVDGERSGDGKSTRGMHSIGT---LQGRFLKLAVNWAASRGQRLSGDPELCALLGRCLWNEGDLERGTRYLVLGERPLELLDLISRDVSAGSARNLAVTKGVLQFASKASLRDANALLTAYKVSLGFGPPTG-LISFCVLLLKTCEYDAAPVFQKLLEHFRAELSVDAALFGFVETIAMVYFGIRLRPPSMLDNIMGMFG 1079
            ++AGRS+RR G GA   ++A+VE+KL  GL+YEALQLYRG  +RK+ARG  D+A ++AE G  VL+ +G+ADSA+EL   LV+I  ++     +ER+ RI+R++ +Y++      ++NK      G+              G  +G  ++ +  H + +   LQ +FLK AV W A+ G R +GD  L AL GRCL+  G+ E GT  +V GE+P+EL  L+                GVL F +  +LRDANA   A++ +       G    F  LL  TCE DAAP+FQ+L E  RA  S D A+   +  I  V+F I L PPSMLD+I+ M G
Sbjct:    4 ALAGRSTRRQGNGAAERVKAMVEEKLDAGLEYEALQLYRGQAARKAARGDFDSAAAMAETGAQVLMQRGFADSASELSRQLVEIYKENGCDVTQERLDRIQRLDALYQE------VANKGPGELKGK--------------GSEAGIAQARQVRHPVQSGFELQAKFLKAAVAWTAAAGPRPAGDAALNALPGRCLFAMGNAEAGTSRMVAGEQPIELRLLMM---------------GVLHFLALGNLRDANAQRAAWEAAAAPERARGGAQQFVRLLCATCERDAAPLFQRLAEAMRA--SGDPAVEKHLAQIGRVFFSI-LPPPSMLDSILKMMG 303          
BLAST of mRNA_D-herbacea_F_contig100.248.1 vs. uniprot
Match: D7G1P9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1P9_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 1.210e-34
Identity = 72/98 (73.47%), Postives = 78/98 (79.59%), Query Frame = 3
Query:  558 QGRFLKLAVNWAASRGQRLSGDPELCALLGRCLWNEGDLERGTRYLVLGERPLELLDLISRDVSAGSARNLAVTKGVLQFASKASLRDANALLTAYKV 851
            QGRFLKLAV W  +RGQRL  D  LC L+GRCLWNEG+LERGTRY VLGERP EL DLI +DVS  +AR LAV KGVLQFA K SLRDANALL A K+
Sbjct:   10 QGRFLKLAVAWTTARGQRLRDDSGLCGLVGRCLWNEGELERGTRYHVLGERPQELCDLILQDVSDANARKLAVGKGVLQFARKRSLRDANALLAANKM 107          
BLAST of mRNA_D-herbacea_F_contig100.248.1 vs. uniprot
Match: A0A6H5JIE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIE4_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 1.240e-12
Identity = 37/47 (78.72%), Postives = 39/47 (82.98%), Query Frame = -3
Query: 2734 AYEARVAPPSDPECIFSLATRRCEPQARCRLKFRWGDLTLSNACRLV 2874
            AYEARVAPPSD EC FS  TRRCEPQ  CRL+FRWGDLT S+ACRL 
Sbjct:  771 AYEARVAPPSDSECSFSFETRRCEPQPLCRLRFRWGDLTPSSACRLA 817          
BLAST of mRNA_D-herbacea_F_contig100.248.1 vs. uniprot
Match: D7FHY4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY4_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 4.080e-12
Identity = 36/47 (76.60%), Postives = 38/47 (80.85%), Query Frame = -3
Query: 2734 AYEARVAPPSDPECIFSLATRRCEPQARCRLKFRWGDLTLSNACRLV 2874
            AYE RVAPPSD EC FS  TRRCEPQ  CRL+FRWGDLT S+ACRL 
Sbjct:  606 AYEERVAPPSDSECSFSFETRRCEPQPLCRLRFRWGDLTPSSACRLA 652          
BLAST of mRNA_D-herbacea_F_contig100.248.1 vs. uniprot
Match: A0A2T6ZEC8_TUBBO (Uncharacterized protein n=1 Tax=Tuber borchii TaxID=42251 RepID=A0A2T6ZEC8_TUBBO)

HSP 1 Score: 75.5 bits (184), Expect = 7.490e-11
Identity = 83/344 (24.13%), Postives = 132/344 (38.37%), Query Frame = 3
Query:  132 QALVEQKLADGLQYEALQLYRGVVSRKSARGQDDAAMSIAEQGMGVLLGKGYADSATELGNVLVDILTDHELVPNEERVARIKRVNDMYEDAKQAAMLSNKDRPTAAGEQGSGXXXXXXXEVDGERSGDGKSTRGMHSIGTLQGRFLKLAVNWAASRGQRLSGDPELCALLGRCLWNEGDLERGTRYLVLG-ERPLELLDLISRDVSAGSARNLA---VTKGVLQFASKASLRDANALLTAY-------------------KVSLGFGPPTGLISFCVLLLKTCEYDAAPVFQKLLEHFRAELSVDAALFGFVETIAMVYFGIRLRPPSMLDNIMG-MFGGASN 1091
            +A +E+K+ +G  YEA Q  R V  R       DAA+ I   G   LL  G   S  +L  +LV++     + P+    AR+           Q   L + + P+                                       RF+   + W+A  G+  +GDPEL   +G  L  E +     ++LV+G +   E+   +  D       + A     + V  +    +LRDA  LL  +                    V +   P   L++F  LLL  C+     +F+ L  H+   L         +E I  +YFGI++R P+ + ++MG MFGGA N
Sbjct:   10 RARLEKKIQEGAYYEAHQQLRVVSQRYIKAHNYDAAIDILCSGAEALLKAGQGGSGCDLCLMLVEVYKAGSVTPSATSRARLI----------QLISLISPEEPSRK-------------------------------------RFINEVIAWSAKHGEYPAGDPELHHFIGTLLAQEDNTYEAEKHLVVGIKESTEIFSDMLYDWYTEDEPHTAPIYAARAVFPYLLIGNLRDATRLLAMFTRKLIENSTSLAIQEVQTASVDVKVIPSLPLLNFLNLLLLACQTGGQDMFRTLKSHYSNNLKEAPHWDEALEQIGEIYFGIQVRRPASIFDMMGSMFGGAPN 306          
BLAST of mRNA_D-herbacea_F_contig100.248.1 vs. uniprot
Match: A0A5J5F4B7_9PEZI (Uncharacterized protein n=1 Tax=Sphaerosporella brunnea TaxID=1250544 RepID=A0A5J5F4B7_9PEZI)

HSP 1 Score: 73.6 bits (179), Expect = 3.170e-10
Identity = 84/345 (24.35%), Postives = 136/345 (39.42%), Query Frame = 3
Query:  132 QALVEQKLADGLQYEALQLYRGVVSRKSARGQDDAAMSIAEQGMGVLLGKGYADSATELGNVLVDILTDHELVPNEERVARIKRVNDMYEDAKQAAMLSNKDRPTAAGEQGSGXXXXXXXEVDGERSGDGKSTRGMHSIGTLQGRFLKLAVNWAASRGQRLSGDPELCALLGRCLWNEGDLERGTRYLVLGERPLELLDLISR--------DVSAGSARNLAVTKGVLQFASKASLRDANALLTAY-------------------KVSLGFGPPTGLISFCVLLLKTCEYDAAPVFQKLLEHFRAELSVDAALFGFVETIAMVYFGIRLRPPSMLDNIMG-MFGG 1082
            +A +++++ +G  YEA Q  R V  R    G  ++A+ I   G   LL  G   S  +L  +LVD+    +L P+    AR+  +  M      A   S K                                           RF+  A+ W A  G+  +GDPEL    G     E ++    ++L+LG +  E  D+++R        +    +A N  + + VL      +LRDAN  L  +                      +   P   L++F  LL    +   A VF+ L  H+ ++L    A    +E I  +YFGI++R P+ + ++MG MFGG
Sbjct:   10 RARLQKRIEEGQYYEAHQQLRVVSQRYIKIGDYNSAIEILSSGAQALLKAGQTGSGGDLCLLLVDVYRTAKLTPDAASKARLVELITMMP----AEEPSRK-------------------------------------------RFINEAIAWTAKFGEFPAGDPELHHFAGNLYAQEDEVYEAEKHLILGTK--ESADVLARMLYDWYKENPEVHTAPNY-IARAVLPCLLIGNLRDANRSLDLFIQQLIQDNSTLVVQEVQSASADVRIFPSLPLLNFLSLLRLGVQTGGADVFRNLKSHYASQLREVPAWDDALEQIGEMYFGIQIRRPTNILDMMGSMFGG 304          
BLAST of mRNA_D-herbacea_F_contig100.248.1 vs. uniprot
Match: A0A0N5ARC5_9BILA (Uncharacterized protein n=1 Tax=Syphacia muris TaxID=451379 RepID=A0A0N5ARC5_9BILA)

HSP 1 Score: 66.2 bits (160), Expect = 1.110e-7
Identity = 78/339 (23.01%), Postives = 140/339 (41.30%), Query Frame = 3
Query:  141 VEQKLADGLQ----YEALQLYRGVVSRKSARGQDDAAMSIAEQGMGVLLGKGYADSATELGNVLVDILTDHELVPNEERVARIKRVNDMYEDAKQAAMLSNKDRPTAAGEQGSGXXXXXXXEVDGERSGDGKSTRGMHSIGTLQGRFLKLAVNWAASRGQRL----SGDPELCALLGRCLWNEGDLERGTRYLVLGERPLE----LLDLISRDVSAGSARNLAVTKGVLQFASKASLRDANALLTAY---KVSLGFGPPTG--LISFCVLLLKTCEYDAAPVFQKLLEHFRAELSVDAALFGFVETIAMVYFGIRL--RPPSMLDNIMGMFGGASN*CG 1100
            +E++++D  +    YEA QLYR +  R S   + D    I   G+  L+     +SA +LG + ++++T  E   N E + + +++          ++   K+R     +QG+                D KS            RFL  AV W+ S  ++      G  +L   + + LWN GD      + +L + P E    L+D   +D   G+ ++L   + VLQ       R A+ +L  Y     S+   PP    L++F   L+         +F +L+E +  +   D +   +++ I  VY G+    +    L N++    G+S   G
Sbjct:    7 LEKRISDCFENTNYYEAHQLYRTLYFRLSTHQEWDELQRILCDGILKLVEVNEHESAIDLGELYIEVMTKAETPVNSESLEKFEKLF--------TSLFPKKERNENQWKQGT----------------DQKS------------RFLAQAVKWSMSVSEKKRYKQKGHADLHGCIAKVLWNNGDYGGARNHFMLSDEPEEFAKFLVDYQQKD-GCGNEKDLFAVQAVLQLLCNRRPRTASLVLVNYCKDHPSISDKPPYNFPLLNFARYLILVIRAKKVEMFTRLIETY--DFHRDPSFTRYLDKIGQVYLGVPAPQKQSDFLGNLLKGLVGSSQTAG 306          
BLAST of mRNA_D-herbacea_F_contig100.248.1 vs. uniprot
Match: A0A6U2WP65_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U2WP65_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.620e-7
Identity = 79/351 (22.51%), Postives = 139/351 (39.60%), Query Frame = 3
Query:  138 LVEQKLADGLQYEALQLYRGVVSRKSARGQDDAAMSIAEQGMGVLLGKGYADSATELGNVLVDILTDHELVPNEERVARIKRVNDMYEDAKQAAMLSNKDRPTAAGEQGSGXXXXXXXEVDGERSGDGKSTRGMHSIGTLQGRFLKLAVNWAASRGQRLSGDPELCALLGRCLWNEGDLERGT-----------RYLVLGERPLELLDLISR------------DVSAGSARNLAVTKGVLQFASKASLRDANALLTAY-----------------KVSLGFGPPTGLISFCVLLLKTCEYDA--APVFQKLLEHFRAELSV---DAALFGFVETIAMVYFGIRLRPPSML 1055
            L E+++ +   YEALQL +  V +K   G    A ++A +G   LL K     A++L ++LV++L +     +++ V+R+  +++ Y  A                                    DG +      +  L+  +L    NW++  G    G   L  +L    W    +E+ T           +++ L E+P +++  +                 A + R+  +T+ +L  A+  +LRDAN LL  Y                 K   G  P    + F  +LL+ CE D    P++  L+  F+ E+      AA+ G+   I   YF I+  PPSM+
Sbjct:   32 LSEEEMDEPTAYEALQLAQSQVRKKYHAGDFGGATTLAYEGSLALLKKKRVSVASQLMDLLVEVLRETHTSDSDDWVSRLVEIHNSYVSAM-----------------------------------DGLAGTEATRLHRLERDWLLKCTNWSSDLGTIKFGSNRLQEVLAEQCWTLSLVEQETEEILDLQCDAVQHMCLAEQPDKIVAWLKTLPAPTEEETRTGHTCAPAVRDALLTRSLLLLAAMENLRDANKLLRGYIDTVEERNIKELAASYTKKDDGLAPSH--VIFGCMLLRICEKDTRTGPLYSWLMRSFKREIERLYNPAAVLGYTTKIGKQYFNIQ-PPPSMM 344          
BLAST of mRNA_D-herbacea_F_contig100.248.1 vs. uniprot
Match: A0A060TD77_BLAAD (ARAD1D48708p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060TD77_BLAAD)

HSP 1 Score: 59.7 bits (143), Expect = 9.010e-6
Identity = 55/184 (29.89%), Postives = 83/184 (45.11%), Query Frame = 3
Query:  588 WAASRGQRLSGDPELCALLGRCLWNEGDLERGTRYLVLGER--PLELLDLI---SRDVSAGSARNLAVTKGVLQFASKASLRDANALLTAY-----------------KVSLGFGPPTGLISFCVLLLKTCEYDAAPVFQKLLEHFRAELSVDAALFGFVETIAMVYFGIRL-RPPSMLDNIMG 1070
            WA+  GQ   GDPEL  +LG       +     +YL+LG R  P  L  L+   S++ S      L  ++GVL +    ++RD+ ALL  +                 K SL    P  L++F  LL+ +C+Y  A +F +L   +  +L    A    +  I   YFGI   R  +ML ++MG
Sbjct:  113 WASQYGQYKYGDPELNHILGSIFARADEAYEAEKYLLLGTRDSPKVLAKLLFEWSQEDSNSHTLPLYASRGVLGYLCIGNIRDSKALLDEFISQCPSEWYTTVEQQGEKASLFKDYP--LMTFLQLLVLSCQYKNADMFNRLKTRYSDKLQDVQAFNVPLARIGRDYFGIEPPRQHNMLQDLMG 294          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig100.248.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FHY1_ECTSI2.220e-13970.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZB05_9STRA1.660e-5039.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G1P9_ECTSI1.210e-3473.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JIE4_9PHAE1.240e-1278.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHY4_ECTSI4.080e-1276.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2T6ZEC8_TUBBO7.490e-1124.13Uncharacterized protein n=1 Tax=Tuber borchii TaxI... [more]
A0A5J5F4B7_9PEZI3.170e-1024.35Uncharacterized protein n=1 Tax=Sphaerosporella br... [more]
A0A0N5ARC5_9BILA1.110e-723.01Uncharacterized protein n=1 Tax=Syphacia muris Tax... [more]
A0A6U2WP65_9STRA1.620e-722.51Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A060TD77_BLAAD9.010e-629.89ARAD1D48708p n=1 Tax=Blastobotrys adeninivorans Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig100contigD-herbacea_F_contig100:775178..781833 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score435.6
Seed ortholog evalue2e-119
Seed eggNOG ortholog2880.D7FHY1
Preferred nameGET4
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006508,GO:0006605,GO:0006612,GO:0006620,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006996,GO:0007029,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010033,GO:0010243,GO:0010256,GO:0010498,GO:0015031,GO:0015833,GO:0016043,GO:0019538,GO:0030163,GO:0031647,GO:0031974,GO:0031981,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0034613,GO:0034976,GO:0036503,GO:0036506,GO:0042221,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045048,GO:0045184,GO:0045185,GO:0046907,GO:0050896,GO:0051087,GO:0051179,GO:0051205,GO:0051220,GO:0051234,GO:0051235,GO:0051603,GO:0051641,GO:0051649,GO:0051716,GO:0061024,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071816,GO:0071818,GO:0071840,GO:0072379,GO:0072380,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1904378
EggNOG free text desc.protein insertion into ER membrane
EggNOG OGsKOG3024@1,KOG3024@2759
Ec32 ortholog descriptionUncharacterised protein family UPF0363
Ec32 orthologEc-12_006320.1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size2876
Cds size1008
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig100.248.1prot_D-herbacea_F_contig100.248.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig100 775264..779296 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927417.422612-UTR-D-herbacea_F_contig100:775177..7752631622927417.422612-UTR-D-herbacea_F_contig100:775177..775263Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 775178..775263 +
1690790159.8423476-UTR-D-herbacea_F_contig100:775177..7752631690790159.8423476-UTR-D-herbacea_F_contig100:775177..775263Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 775178..775263 +
1622927417.51505-UTR-D-herbacea_F_contig100:779296..7809741622927417.51505-UTR-D-herbacea_F_contig100:779296..780974Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 779297..780974 +
1690790159.8934715-UTR-D-herbacea_F_contig100:779296..7809741690790159.8934715-UTR-D-herbacea_F_contig100:779296..780974Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 779297..780974 +
1622927417.5270894-UTR-D-herbacea_F_contig100:781729..7818331622927417.5270894-UTR-D-herbacea_F_contig100:781729..781833Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 781730..781833 +
1690790159.9013324-UTR-D-herbacea_F_contig100:781729..7818331690790159.9013324-UTR-D-herbacea_F_contig100:781729..781833Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 781730..781833 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927417.4345336-CDS-D-herbacea_F_contig100:775263..7757371622927417.4345336-CDS-D-herbacea_F_contig100:775263..775737Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 775264..775737 +
1690790159.852113-CDS-D-herbacea_F_contig100:775263..7757371690790159.852113-CDS-D-herbacea_F_contig100:775263..775737Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 775264..775737 +
1622927417.4462557-CDS-D-herbacea_F_contig100:776925..7771281622927417.4462557-CDS-D-herbacea_F_contig100:776925..777128Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 776926..777128 +
1690790159.8594728-CDS-D-herbacea_F_contig100:776925..7771281690790159.8594728-CDS-D-herbacea_F_contig100:776925..777128Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 776926..777128 +
1622927417.4861693-CDS-D-herbacea_F_contig100:777955..7780611622927417.4861693-CDS-D-herbacea_F_contig100:777955..778061Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 777956..778061 +
1690790159.8694615-CDS-D-herbacea_F_contig100:777955..7780611690790159.8694615-CDS-D-herbacea_F_contig100:777955..778061Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 777956..778061 +
1622927417.4953508-CDS-D-herbacea_F_contig100:778471..7785971622927417.4953508-CDS-D-herbacea_F_contig100:778471..778597Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 778472..778597 +
1690790159.8769162-CDS-D-herbacea_F_contig100:778471..7785971690790159.8769162-CDS-D-herbacea_F_contig100:778471..778597Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 778472..778597 +
1622927417.5062966-CDS-D-herbacea_F_contig100:779197..7792961622927417.5062966-CDS-D-herbacea_F_contig100:779197..779296Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 779198..779296 +
1690790159.8846984-CDS-D-herbacea_F_contig100:779197..7792961690790159.8846984-CDS-D-herbacea_F_contig100:779197..779296Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 779198..779296 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig100.248.1

>prot_D-herbacea_F_contig100.248.1 ID=prot_D-herbacea_F_contig100.248.1|Name=mRNA_D-herbacea_F_contig100.248.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=336bp
MAGRSSRRGGGGAGIQALVEQKLADGLQYEALQLYRGVVSRKSARGQDDA
AMSIAEQGMGVLLGKGYADSATELGNVLVDILTDHELVPNEERVARIKRV
NDMYEDAKQAAMLSNKDRPTAAGEQGSGGGNEEEEEVDGERSGDGKSTRG
MHSIGTLQGRFLKLAVNWAASRGQRLSGDPELCALLGRCLWNEGDLERGT
RYLVLGERPLELLDLISRDVSAGSARNLAVTKGVLQFASKASLRDANALL
TAYKVSLGFGPPTGLISFCVLLLKTCEYDAAPVFQKLLEHFRAELSVDAA
LFGFVETIAMVYFGIRLRPPSMLDNIMGMFGGASN*
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mRNA from alignment at D-herbacea_F_contig100:775178..781833+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig100.248.1 ID=mRNA_D-herbacea_F_contig100.248.1|Name=mRNA_D-herbacea_F_contig100.248.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=6656bp|location=Sequence derived from alignment at D-herbacea_F_contig100:775178..781833+ (Desmarestia herbacea DmunF female)
TACTCCTCGGTTGCATAGCACCCTTGTCCCATTGATCACCCACCCACACT GCATCGATTGCCATTTAGAAGCTGACAGTTATCAGTATGGCGGGACGTTC CTCCCGCAGAGGTGGCGGTGGTGCCGGCATCCAAGCGCTCGTAGAACAAA AGCTAGCGGACGGACTCCAATACGAAGCGTTGCAACTCTACAGAGGAGTT GTGTCTCGCAAGTCGGCTAGAGGACAAGATGACGCCGCCATGTCTATCGC CGAGCAAGGCATGGGAGTGCTCTTAGGAAAGGGTTACGCAGATTCAGCCA CGGAGCTGGGCAACGTTCTAGTGGATATTTTGACTGATCATGAGTTGGTA CCGAACGAGGAACGCGTTGCTCGGATCAAGAGGGTGAACGACATGTATGA GGACGCAAAGCAAGCTGCCATGCTGTCCAACAAGGACAGGCCAACCGCTG CAGGGGAACAGGGGTCTGGTGGTGGGAACGAGGAGGAGGAGGAGGTGGAT GGGGAGCGTAGTGGTGATGGAAAATCCACACGAGGAATGCACTCAATTGG AACACTGCAGGTGGGCTTGTCGTTTCTGTGGTTGTGTGAGATGTGAGATG TTCAGGCCCAATGTAACACGAGGACACTTTGGGCGAAAGGCCTATGATAG TCATCGTTACGATTGGATTGTACCGTCTTCGCGCACGGCCAGGTAGCTCG TACTTCGAGTACTACTGAGCTGTACGATACGATATCTGCTGCAGACAGCA TGGGTTTTTTTACAAACAAATAATGCGAATATCATCCAACCAAAATTACA ATATTACAACTATTTAATAGACTACTCATGCAGTAGGTTATACTCGTTTT AGGTTTTCACTTGCAATGCGGCCAGGAGCGCCACCATACTCTTTTTCTAC CATACCGTGCTACTGTACTCGTATAACCCCGCCATTCAGAACACGAGGCA ACTACGATCCGCACATGATCACTTACAGAAACCCAGACGGTGGATCTTCT TGTCCATCATGCGGGGCACATCAGCTCAATTACATGTTGTAGGGAAAACC TGCTCTTCTCGCTCTTTGCATCCTACTTCCGTAGAGCTCGTAGCCGACCT GTACAGGGATTTCCATGTGTCCAACAGGCGCCCTCGTTTCCTTGAGATCC ACAGTTCGCGGGTACACCCGTCCTACTGCTGAGGCCCGTCCTTCCTCGCA ATGTTTATTGTTATCCGTCGTCATCGAACGCATTTCGCAGTGCACGACAA CGAGATATAATAATTAAACGGTTGCAGTCGTGCTTTTTTTAGTATTTGTT GTTTACAAATACATCAGCCGTGATGTTCCAAACTGGTTCGGGGGACCTTT TTTTACTGCGCTACGACAGCGGTGTCTATGGCAATTTATTTTTTTTCCAA GCACGCGTCGTCGCTGAAATGCCGCAGGCGCACGTATGGGTATAGTACGT GCATCTCCAGTATCTCGTGCACGAGGTACTGCATTCTTATCATGCTGTAC AAGTAATCTGTTGCGACATACTGGTAAAGTAGACGCCTGACAAGCTGACA AGCTGACAAGCGTTTGGCAGTTGATGCGAGCGCGGCATCCTACGCCCGCT TTTACGCCGTATGACCTTGCCGAGCTGTCGAATCGATCTCAAACGTGTTG GCTCTGCCTATTATTGCGTTTTTCTTGTTTATTTTAAAACGCATATTCGA TGTGTACACATCCCCAACGGTGCGTTCCGCTTGGTCAAACTAGCACAGGG GCGATTCCTGAAGCTCGCGGTCAACTGGGCGGCTTCTCGTGGCCAGCGCT TGAGCGGTGACCCCGAGTTGTGTGCGCTCTTGGGGCGATGCCTCTGGAAC GAGGGAGACTTGGAACGTGGCACGAGGTACCTCGTGCTGGGGGAGCGACC GCTGGAGCTATTGGATCTTATCTCGCGGGACGTCTCGGCGGGGAGCGCGA GGTGAGGAGTTGTCAAACGACGGCAAGGGTGGGCGTCGTTTTTCTTTTTG CCTTTTTTTGTTGAAACATTTTTCGAGTATCGTGTGCGGAGACACGGCAG TAGTGGTGTTGATACTGTGGTTCGTGCCCGTTGCTGTCCTTGTACGGTGG CCGCACGAGGTGCGCGATCATAGTGTCGTCGTAGGGTCGTTTTCTTTGGG GGAAGGGGGAGCTCAAGAATGTGACGATGTGGTTTTGTAGTCCATTCTGT GCGTGTGTGTGTGCAGATGCGCCAGTCTTGAGGACAACGTGAATCCCGGA TTTGTGCTATCATTGGAAACCCAAATCGTTTGGTCAGAGACTAGTGTCGA GCCACTTCTTACGCCTTGAAGCCGTGTGCTGGGCTTTATTTTCTCCCGAT TGTTGTTTTTGCGGTAGGCAACAAGGACCACGGTAGGCCACACCGCAGTA GTTACATACTCGGCGGGGGGACGACGCAATCTTCTTGAGCAAGTTCTCTA AATTATATATGAATGCACGTTTCATTTTTATTCTATTCGTACTCAAATTG GGGGACTGAACCACTCGAAAGCCACGGGCCAACGTCCAAAAATAAATAGA TTGCGGCGCGTTGAAGAAATGAGAAGAGCGCTGCGCGCCGCAAGATAGTC TTGCGCTTTTACACCAGCGTGTTGGAGAAGATATCACACGAGCTGCTGCT GTCGCTGTCGTCACAAATGCCCTCGTTGGCAACAAGTATATATACGTGGG TACGGCGTGAATCTCCGGTGTCGCGCCACGTTTATACGCCACCATTATAT TGTTGATGTTGTCTTGTGTTTCGTGCAGAAACTTGGCGGTCACCAAGGGC GTCCTGCAGTTCGCAAGCAAGGCAAGCCTACGGGACGCTAACGCGCTATT AACGGCGTACAAGGTGAGTCTAGGTTTTGGACCGGTTTGTATGTGTGTGT GACACACCCATATTCTCGGAAACGCGATGTAGTAAGCGGTTTAGCCGGGT TTTTTCGCTTCGTATGTGCGTGCTATTTATGCGGCGAAGTGAGGTACCTG GTATCGTACGGCCAACACTTGGCGGTATTTTTTTGCGCGTGAAGGGACGT GTCTGATGTTTGCGTTTGAGTATCATATATCGAGAAATTTAGAAAAAAAT CCCCGTTCGCAGAGACTAGAAACCTTCGGCGGTGCTGTCGAGGACTGCCA TCGCGATAACCTGTTGCCTTCACAAGTGGAACACCGCTCTTGTCCGCGTC ACCCCCCCCCCCGTTCCTCCCTCTTCCCCCCTGCTTTTGTGGCGTTGCAT GGACGTATGCGTCTCGGTCGTACATGAAGCAGGCAGAAGGCAAGCCGACA GGCTTGATATCGTTTTGTGTGCTGCTGCTCAAGACCTGCGAGTACGACGC GGCGCCCGTGTTTCAGAAACTGCTCGAACATTTCCGAGCCGAGCTCTCGG TGGACGCCGCCCTGTTTGGAGTGAGTAGTTCGTTATTTTGTTCACGGTGT GATATCATAATAATGGGATCGAGGTTGTCCTTTTCGTTGAGGCCTCTGTC GTGTGCCGAGAGGCAGACAGAAGTAGTTTCGCATGTTTTTTGTGTTTTTT TTTGTCTGTGATAAAACTTGCGTCTTTCTTGTGTGTGATACCGGGTGTGT GCCGCTATCTACCATGATGCGGGGCGTACGTTGTGTTAATGTTATGGAGC TGTTCTCAGCTGTGTGGAAGGAAGGCCAACTATTTTTACGATCAAAATAT GCTTGCTCGTCTTTTGAATCGCACTCGCGCGTAAGACCGTCCGCTGTTAG CGTTACCCCCGCGGAGTTTTGTCTCCACCATTAGAGTCGGCAACCGCAAG CATTTGTATGTTGTGTTTTTGTGATGTATACTACTCGTACATATGATAGG ATGGCGTATTCTCATGACGGACTTGAAAGCAATGTGCATAATAGTAAGTG CTCTAGGACCCGTATGTCCTAACCCCCCCCCTCCCCTTCCCACCCTCTCT TCCTTCCCCACGGCTGTGTCCGGTTTGCCTCGTCTTGCGCGTCTTCCTGT GCCGTGGCGCGTATTGCAAGTTTGTGGAGACGATCGCCATGGTGTATTTC GGCATTCGACTGCGACCACCGTCCATGCTCGACAACATCATGGGCATGTT CGGCGGAGCGTCAAACTAGTGTGGTTGTCGGTATCTCGCGTTTGCTGTTT TGCGGCGGGATGTAGACGCGTGTATCTCACGGCCTTGTCTTTTAAGCGTT GCTTTTTCCTGTCTTCGAGCACGATCCAGCAAAACCACCTTCTAGTCTAC GTTTGCCGCCACTTTGCACGGTTCGGATTCTCGGGAGAATGAAAGAAAAA AATTCCAAACGTTGCGGGTTGCAGGTGAACGGTTTTTGCACGGCATGTGC GCAGAATGTGTGGCAATCAAAGTGATGTCTGTCCTCACGAGTTTCGCAGG CCGTGCGAGTCGTCTACTTTGTTCAGAGCTACTTGTAGTAGAGCTATACA GCAAACAAACGTGTGTGACGTGCATGATGCGAGTGACGTTTGTAAGAACA GGTGGGCGGATGAGACAGCAACTTGCTCAAAACACGTTGTTCATGACAAT GTTCACACACTTGAGCATCCGTGTGCTGTGGTCTCCTCGTGTTTGCACGT CGTTTTGCTGCACGATACGTTAAACCCTGCGATCGCGTGTTGTCGACATC TGATCTTCCTCTATTTACAACTTGGAGCCGACGAAAGTGTATCCTTCTGT TCGCGCATGTACCCGCGCAACACCTCTTGCTTTGCTCTTGCTTTGCAGAG GACTCGTACTACTGCCATCTGTTTTGTAGCACACCTGTAACTTTATATTC GTACGAAGTACTGTGGGGGGGGGGAAGTGACCCTTCATCCTTGCATACAC AGAGCAAGTTTCTGTAATGTACACGGAGTTACACTCTAGTTACTTGTCGC GAGGGAATTGATGGATACGTAAATAACAAGAGAGAAACAATGCCTCCGGC TGCAACACAGACAAACCGTCTTACCTCCGTCGCCAAGCCGGGTGAGCGAT TAGCTAAAACTACCTACTACGACTACTACTACTGCAGGCGACACACGAAA GCACAGCAGTACTACCACGATGTCAAAACTAACTGCAAGGAAAGATACTA CAATAGGAGACGCGTCATAAACCCCCCGTTGAGACCTTTACCGGTGATAA TATACTAGTTTTCGTACAGGAGGCTTCCTTGACTGGTCGTTCGTCAAGGG GTACAACTGCCGTCTCCTATGGTACGCCACCTCGACCGCAGGCAATACGT CGCACACAGAGCTACAACAGACAGTATAATAGTTGTAAAAGACGACCACA ACAACCAAACAACGTAACACTTTTTCCCTCGCGCCTGATACATGTTTGAT CGTCGGGAGCACCATGGCGACCGACTAACCAACAACGCTCCCGTACACCG GCAGCGACATTGCGTGTTCTACAACAGGTATACATTGGCTCAAAATGTAC GGCTTGCTGTGCAAGCGTGGTGAACTTAACCTCTTATCTTTACCCATCCA CCGGAGGGTAAAACACAAAACAGCAAAAGCAGGAGACGCCGAAAAAACAC AAAAACGACCAACGTGGTGGCGTAAGTATAGAGGGCCAGCAGTACTTCCT TCCTCCGTGGTAATCATGACTGTACATACACAGGTGCTCTTCCAAACGAG GTTCAACAAACCCGCGTTGTTATCAATCTCCTGCATTCCTATATAAACGC AGCTCTAGTATTGGTACGCCGGGTTCCTGGGTATTGCGGTGGCAGGTCTT TCTTCCTCAACAAGCCTGCAAGCGTTGCTTAAGGTCAGGTCTCCCCACTG GGCGGCGACAAAACAAAAAAGCGCCAGCGACGACGGACAGAAGGGAACGT GAGGGGGGCATGCTTACGTTTTGATTGCCTTAACCGTTGGATCACGGACA ACGCCTCCCCGAGGAGACGAGGGAGCATTCACGAGCGGGTCGACTGCTCC GTGTCGAAACGTAAAAAAAAAAACAGTATATTCGAAAACGCGATTCTTGT TGCCGTTATATCGGCTGTAACCTTCGACCGACGCGGACATTGATAAGGAC AATGGGGATGCCGCAATACAAGAAAATTAATCAGCAGGTGGTTCATTTAT CCGGTTTCTCTCTTCCGCATGTAATCGCAAAACACGCGCGAAATTCATCA CAAGGTCATGTGCTGTATAAACCACCACTTGGGACATGTAACGGATACAC TACACTCCGCGCGAAACAGCACGCAGAGCAGACCATACAACCGACATGCG TCCGTCGCGTATATAGGTCAGACGCGCCGTTTTTTCACTGTCGTCGAGAA AATCAGAACACGCCGCGCAAGTAGGCAGCGCGCTTGTCTCCTACGTCGAC AACATCAATAAAAATGGGGGGGGGGGGGAAGAACTCACCAAACTTCGCGC CATTACCATCACATCGAACGAGCTGGGAAACATAAAACTTTCCGACAAGT CTCCTCTCCCTCTCCTTTCCATTCATGTGAAAATCATATTGCATCATCGT AACTGTTCCAATACTACTGTAGCCACACTACCCCCGCCACGAAAATTCTC ACCCGAAATTTGAGTCGACACCGCGCTTGCGGCTCGCATCGTCTCGTTGC TAAACTGAAGATGCACTCGGGGTCAGAGGGCGGAGCCACGCGCGCCTCGT ACGCCC
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Coding sequence (CDS) from alignment at D-herbacea_F_contig100:775178..781833+

>mRNA_D-herbacea_F_contig100.248.1 ID=mRNA_D-herbacea_F_contig100.248.1|Name=mRNA_D-herbacea_F_contig100.248.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2016bp|location=Sequence derived from alignment at D-herbacea_F_contig100:775178..781833+ (Desmarestia herbacea DmunF female)
ATGGCGGGACGTTCCTCCCGCAGAGGTGGCGGTGGTGCCGGCATCCAAGC
GCTCGTAGAACAAAAGCTAGCGGACGGACTCCAATACGAAGCGTTGCAAC
TCTACAGAGGAGTTGTGTCTCGCAAGTCGGCTAGAGGACAAGATGACGCC
GCCATGTCTATCGCCGAGCAAGGCATGGGAGTGCTCTTAGGAAAGGGTTA
CGCAGATTCAGCCACGGAGCTGGGCAACGTTCTAGTGGATATTTTGACTG
ATCATGAGTTGGTACCGAACGAGGAACGCGTTGCTCGGATCAAGAGGGTG
AACGACATGTATGAGGACGCAAAGCAAGCTGCCATGCTGTCCAACAAGGA
CAGGCCAACCGCTGCAGGGGAACAGGGGTCTGGTGGTGGGAACGAGGAGG
AGGAGGAGGTGGATGGGGAGCGTAGTGGTGATGGAAAATCCACACGAGGA
ATGCACTCAATTGGAACACTGCAGATGGCGGGACGTTCCTCCCGCAGAGG
TGGCGGTGGTGCCGGCATCCAAGCGCTCGTAGAACAAAAGCTAGCGGACG
GACTCCAATACGAAGCGTTGCAACTCTACAGAGGAGTTGTGTCTCGCAAG
TCGGCTAGAGGACAAGATGACGCCGCCATGTCTATCGCCGAGCAAGGCAT
GGGAGTGCTCTTAGGAAAGGGTTACGCAGATTCAGCCACGGAGCTGGGCA
ACGTTCTAGTGGATATTTTGACTGATCATGAGTTGGTACCGAACGAGGAA
CGCGTTGCTCGGATCAAGAGGGTGAACGACATGTATGAGGACGCAAAGCA
AGCTGCCATGCTGTCCAACAAGGACAGGCCAACCGCTGCAGGGGAACAGG
GGTCTGGTGGTGGGAACGAGGAGGAGGAGGAGGTGGATGGGGAGCGTAGT
GGTGATGGAAAATCCACACGAGGAATGCACTCAATTGGAACACTGCAGGG
GCGATTCCTGAAGCTCGCGGTCAACTGGGCGGCTTCTCGTGGCCAGCGCT
TGAGCGGTGACCCCGAGTTGTGTGCGCTCTTGGGGCGATGCCTCTGGAAC
GAGGGAGACTTGGAACGTGGCACGAGGTACCTCGTGCTGGGGGAGCGACC
GCTGGAGCTATTGGATCTTATCTCGCGGGACGTCTCGGCGGGGAGCGCGA
GGGGCGATTCCTGAAGCTCGCGGTCAACTGGGCGGCTTCTCGTGGCCAGC
GCTTGAGCGGTGACCCCGAGTTGTGTGCGCTCTTGGGGCGATGCCTCTGG
AACGAGGGAGACTTGGAACGTGGCACGAGGTACCTCGTGCTGGGGGAGCG
ACCGCTGGAGCTATTGGATCTTATCTCGCGGGACGTCTCGGCGGGGAGCG
CGAGAAACTTGGCGGTCACCAAGGGCGTCCTGCAGTTCGCAAGCAAGGCA
AGCCTACGGGACGCTAACGCGCTATTAACGGCGTACAAGGTGAGTCTAGG
TTTTGGACCGAAACTTGGCGGTCACCAAGGGCGTCCTGCAGTTCGCAAGC
AAGGCAAGCCTACGGGACGCTAACGCGCTATTAACGGCGTACAAGGTGAG
TCTAGGTTTTGGACCGCCGACAGGCTTGATATCGTTTTGTGTGCTGCTGC
TCAAGACCTGCGAGTACGACGCGGCGCCCGTGTTTCAGAAACTGCTCGAA
CATTTCCGAGCCGAGCTCTCGGTGGACGCCGCCCTGTTTGGACCGACAGG
CTTGATATCGTTTTGTGTGCTGCTGCTCAAGACCTGCGAGTACGACGCGG
CGCCCGTGTTTCAGAAACTGCTCGAACATTTCCGAGCCGAGCTCTCGGTG
GACGCCGCCCTGTTTGGATTTGTGGAGACGATCGCCATGGTGTATTTCGG
CATTCGACTGCGACCACCGTCCATGCTCGACAACATCATGGGCATGTTCG
GCGGAGCGTCAAACTAGTTTGTGGAGACGATCGCCATGGTGTATTTCGGC
ATTCGACTGCGACCACCGTCCATGCTCGACAACATCATGGGCATGTTCGG
CGGAGCGTCAAACTAG
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