prot_D-herbacea_F_contig100.243.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig100.243.1
Unique Nameprot_D-herbacea_F_contig100.243.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length139
Homology
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BLAST of mRNA_D-herbacea_F_contig100.243.1 vs. uniprot
Match: D7FHX6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHX6_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 2.240e-31
Identity = 56/120 (46.67%), Postives = 81/120 (67.50%), Query Frame = 0 
Query:   20 PPVVGRSEKPSNTPRIRLKRPLTREDIPHVQSTVKLFKGLMNGTFTERQRKCIAKNVAVGSVYENVMEECETWIEKPMKFSLCCQRRVCPIEVEELFACIRSTGDASACHEFRDEVERCG 139
            PP    +++P   P++ L  P T+EDIP + ST+KLF+      F+ R+R C+ K+  +G +YE V  +C  +I+KP +F++C  R++CP E  +L ACIR+T DAS CHEFRDEVERCG
Sbjct:   12 PPAGDENDQPKRLPKVTLNTPPTQEDIPQLLSTLKLFRH----QFSPRERHCLGKHPVLGPLYEGVQGKCGQFIDKPRRFAVCSSRQLCPKEQSQLLACIRTTRDASMCHEFRDEVERCG 127
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig100.243.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHX6_ECTSI2.240e-3146.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig100contigD-herbacea_F_contig100:707945..720385 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig100.243.1mRNA_D-herbacea_F_contig100.243.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig100 707852..720385 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig100.243.1 ID=prot_D-herbacea_F_contig100.243.1|Name=mRNA_D-herbacea_F_contig100.243.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=139bp
MTAVEDDSSSNSAGRGLTRPPVVGRSEKPSNTPRIRLKRPLTREDIPHVQ
STVKLFKGLMNGTFTERQRKCIAKNVAVGSVYENVMEECETWIEKPMKFS
LCCQRRVCPIEVEELFACIRSTGDASACHEFRDEVERCG
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