prot_D-herbacea_F_contig100.234.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig100.234.1
Unique Nameprot_D-herbacea_F_contig100.234.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length154
Homology
BLAST of mRNA_D-herbacea_F_contig100.234.1 vs. uniprot
Match: D7G045_ECTSI (Similar to fidipidine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G045_ECTSI)

HSP 1 Score: 209 bits (531), Expect = 1.080e-63
Identity = 112/153 (73.20%), Postives = 128/153 (83.66%), Query Frame = 0
Query:    1 RRQREEDATPGHAELLQYLLRFEELGRHALERERQLRRFQTERSALALTREFLANEARLLETIAGGVEDASKGKAAAREGYLRQLEGIVEGVDDSLANQTRLLDAARSRRRAAEETKVSVAEERKRFLAGSKELTDECYRYEALNAHLALMRR 153
            RRQREED   GHAELLQYLLRFEELG+H+LER+ QLRR + ERS L+LTRE LA +ARLLETIAGGVE+ASKG    RE YLRQ++GIVE V+DSL +QTRLLD  R RR  AEE + SV E+RKRF AG+KEL+DECYRYE+LNAHLALMRR
Sbjct:  244 RRQREEDVALGHAELLQYLLRFEELGQHSLERQEQLRRCRAERSTLSLTRELLATQARLLETIAGGVEEASKGGKGVREAYLRQIKGIVESVEDSLEDQTRLLDNVRRRRHVAEELQASVREDRKRFFAGTKELSDECYRYESLNAHLALMRR 396          
BLAST of mRNA_D-herbacea_F_contig100.234.1 vs. uniprot
Match: A0A6H5JTA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTA4_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 3.760e-30
Identity = 67/94 (71.28%), Postives = 76/94 (80.85%), Query Frame = 0
Query:    1 RRQREEDATPGHAELLQYLLRFEELGRHALERERQLRRFQTERSALALTREFLANEARLLETIAGGVEDASKGKAAAREGYLRQLEGIVEGVDD 94
            RRQREEDA  GHAELLQYLLRFEELG+H+LER+ QLRR + ER  L+LTRE LA +ARLLETIAGGVE+AS G    RE YLRQ++GIVE   D
Sbjct:  284 RRQREEDAALGHAELLQYLLRFEELGQHSLERQEQLRRCRAERLMLSLTRELLAKQARLLETIAGGVEEASTGGKGVREAYLRQIKGIVEVSGD 377          
BLAST of mRNA_D-herbacea_F_contig100.234.1 vs. uniprot
Match: A0A6H5JXP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXP6_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 9.480e-21
Identity = 45/65 (69.23%), Postives = 54/65 (83.08%), Query Frame = 0
Query:   89 VEGVDDSLANQTRLLDAARSRRRAAEETKVSVAEERKRFLAGSKELTDECYRYEALNAHLALMRR 153
            ++ V+DSL +QTRLLD  R RR AAEE + SV E+RKRF AG KEL+DECYRYE+LNAHLALM+R
Sbjct:    3 LKSVEDSLEDQTRLLDNVRRRRHAAEELQASVREDRKRFFAGMKELSDECYRYESLNAHLALMQR 67          
BLAST of mRNA_D-herbacea_F_contig100.234.1 vs. uniprot
Match: UPI001425AACA (coiled-coil domain-containing protein 93-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425AACA)

HSP 1 Score: 55.8 bits (133), Expect = 3.530e-6
Identity = 42/146 (28.77%), Postives = 73/146 (50.00%), Query Frame = 0
Query:    3 QREEDATPGHAELLQYLLRFEELGRHALERERQLRRFQTERSALALTREFLANEARLLETIAGGVEDASKGKAAAREGYLRQLEGIVEGVDDSLANQTRLLDAARSRRRAAEETKVSVAEERKRFLAGSKELTDECYRYEALNAHL 148
            QR+ D  P  AEL QY  RF EL +      ++ ++F T  + L  T+ +L  E  LL +I    + A    A  ++ +L+Q EGIVEGV ++ A   +     ++ R    +  + + E+++ +    K+  +EC + E L + L
Sbjct:  415 QRKIDEVPSRAELTQYQRRFIELYKQMSSTHKETKQFYTLYNTLDDTKLYLEKEVELLNSIHDNFKVAMSSNAG-KDQFLKQFEGIVEGVKNNQAKVDKRRQEEKASRDRLNKNYLDMIEKQRLYFKTIKDFKEECRKNEILLSRL 559          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig100.234.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G045_ECTSI1.080e-6373.20Similar to fidipidine n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JTA4_9PHAE3.760e-3071.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXP6_9PHAE9.480e-2169.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001425AACA3.530e-628.77coiled-coil domain-containing protein 93-like n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 96..123
NoneNo IPR availablePANTHERPTHR16441:SF0COILED-COIL DOMAIN-CONTAINING PROTEIN 93coord: 3..149
IPR039116Coiled-coil domain-containing protein 93PANTHERPTHR16441FIDIPIDINEcoord: 3..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig100contigD-herbacea_F_contig100:611056..614244 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig100.234.1mRNA_D-herbacea_F_contig100.234.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig100 610606..614244 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig100.234.1 ID=prot_D-herbacea_F_contig100.234.1|Name=mRNA_D-herbacea_F_contig100.234.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=154bp
RRQREEDATPGHAELLQYLLRFEELGRHALERERQLRRFQTERSALALTR
EFLANEARLLETIAGGVEDASKGKAAAREGYLRQLEGIVEGVDDSLANQT
RLLDAARSRRRAAEETKVSVAEERKRFLAGSKELTDECYRYEALNAHLAL
MRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039116CCDC93