prot_D-herbacea_F_contig100.219.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig100.219.1
Unique Nameprot_D-herbacea_F_contig100.219.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length702
Homology
BLAST of mRNA_D-herbacea_F_contig100.219.1 vs. uniprot
Match: A0A6H5JSB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSB3_9PHAE)

HSP 1 Score: 511 bits (1315), Expect = 9.010e-167
Identity = 361/775 (46.58%), Postives = 434/775 (56.00%), Query Frame = 0
Query:   14 LSERLVLELAEIFSPKELHIMALEHLHAYSGERALRVVLAVLRRSTQRMSPLQRAKFHESAMQPAFKATKRVAVSVRKYGGGSLPTTDDATHVDG----ASSSDDEECNIPLGGVTNNATTDGGMMAGEDGLLPPWAALIAAIAAAEASVEFVGPLVEQECEERLL------------EAREAANTTAVWAAAGQGSAAMVLRERAKMAASDLSVAAYIGFALSALAHTAEISVC-TAAATATATGDGADDCEAPAISLARAEERLVGLVVDGPVVDLQFVLTHGCRLAYVDRAKRRR--GEGGWEGGRERWMSRSSGYCASSRFGELAVAGAMPWPLRGVSALAYLVACVPRVRDAWLPLVWSRPTECWLFLPHAESLMRDRSKRIAAKGLELACFVAERLERFPDEAIDAFAFEWKPRDES---TGDERW------GGGD--------------------GVIETQQARFLPL---TTTSGDPLRKGTSGRQQQ-------------------WWFDPCHRFDLASYLQVLLDVVVSCPLPNLRARGHAALSSFLVATAEESRFHVLKHLINRCPWPNATGFLLDAFRREIDRVLRRT----------KRVADKRDGVRSSRSSGMSATAMEMEREGGAATSVRAGEAACSPFASAPAGDVVCEQLRRACREAPPMSLLMDMDSRTGGLTLARYAYALDGTGGD---------GDCEGRLKLREPTRLQENRQLVQGFLDELRRANATANSAGPDYFRLFILEDAAQQCLQEL 699
            LSERL L +AEIFSPKELH+MALEHLHAY+  R LRVVL +LRRSTQ+M   +R KF E++++PA +ATKRV         G +    DA    G    +S SD +E                 +   ++ + P  AA  AA +AAE + +F+GPL+EQ   E+ L            E R AA   A   +AG    A+   E+  ++ASDLS+AAYIGFALSAL    E SVC T          G++D      SLARA+ERLVG+VVD P+ DL+FVL HG R+++    KRRR   EGG E G     +   G       GE A+ GA+PW LRGVS LAYLVAC PR+RD WLPLVWSR TE  LFLPHAE+LMRDRSKR+A KGLELACFVAERL  FPD    AFAF+W+P DE     GD+        GGG                     G  +    R+  +     T   P R+  +  QQ+                     FDP H  DLA +LQVL+DV+VSCPLP LR RGHAAL + L A  E SRF VL+ L+  CPWPNA G LLDAFRREIDR LR+                                                  ++ SPFASA AGDVVCEQLRRACR  P  SL+ DMDSRTGGL LARYA+ LD  GG          G   GRL+LREP +L +N+ LVQG LDELR A  TA++AGP++FRLFILEDAAQQCLQEL
Sbjct:  130 LSERLALAMAEIFSPKELHLMALEHLHAYTKARTLRVVLTILRRSTQQMVTARRWKFLEASLRPALEATKRV---------GLVAAAGDAPAEPGLPQKSSGSDADEXXXXXXXXXXXXXXXXXLPTADEDM-PSRAAYDAAASAAETAADFIGPLMEQASAEQALLAVSRVPTAGRGEGRPAAAVVAT--SAGGSGRAVGSGEKEGVSASDLSLAAYIGFALSALELAGETSVCCTXXXXXXXXXXGSEDNPPARESLARAQERLVGIVVDSPL-DLRFVLLHGYRVSFASGVKRRRKRSEGGGEKGESHLPAAKLGGAVG--LGEAAINGALPWTLRGVSTLAYLVACEPRLRDKWLPLVWSRRTERRLFLPHAEALMRDRSKRVANKGLELACFVAERLGGFPDRT-GAFAFDWEPGDEEIDGAGDDXXXXXXXNGGGREEAHTPYGHTRTSAHNYEFYGCPDLLSHRYFTIFRPPPTPFHPFRRDVAAWQQRDADAGSSTISENTNPSSRRRLFDP-HHLDLAGFLQVLVDVMVSCPLPGLRTRGHAALMALLGAADEASRFRVLRRLVELCPWPNARGLLLDAFRREIDRALRQCGIEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSSSPFASALAGDVVCEQLRRACRRGPLASLMADMDSRTGGLALARYAHKLDAVGGARGGSGRAEAGAAWGRLELREPKKLLQNKLLVQGLLDELRGAVITADNAGPEHFRLFILEDAAQQCLQEL 887          
BLAST of mRNA_D-herbacea_F_contig100.219.1 vs. uniprot
Match: D7G1P6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1P6_ECTSI)

HSP 1 Score: 435 bits (1118), Expect = 1.780e-139
Identity = 311/718 (43.31%), Postives = 375/718 (52.23%), Query Frame = 0
Query:   14 LSERLVLELAEIFSPKELHIMALEHLHAYSGERALRVVLAVLRRSTQRMSPLQRAKFHESAMQPAFKATKRVAVSVRKYGGGSLPTTDDATHVDGASSSDDEECNIPLGGVTNNATTDGGMMAGEDGLLPPWAALIAAIAAAEASVEFVGPLVEQECEERLL------------EAREAANTTAVWAAAGQGSAAMVLRERAKMAASDLSVAAYIGFALSALAHTAEISVCTAAATATATGD-GADDCEAPAISLARAEERLVGLVVDGPVVDLQFVLTHGCRLAYVDRAKRRR--GEGGWEGGRERWMSRSSGYCASSRFGELAVAGAMPWPLRGVSALAYLVACVPRVRDAWLPLVWSRPTECWLFLPHAESLMRDRSKRIAAKGLELACFVAERLERFPDEAIDAFAFEWKPRDES---TGDER-----WGGGDGVIETQQARFLPLTTTSGDPLRKGTSGRQQQWWFDPCHRFDLASYLQVLLDVVVSCPLPNLRARGHAALSSFLVATAEESRFHVLKHLINRCPWPNATGFLLDAFRREIDRVLRRTKRVADKRDGVRSSRSSGMSATAMEMEREGGAATSVRAGEAACSPFASAPAGDVVCEQLRRACREAPPMSLLMDMDSRTGGLTLARYAYALDGTGGD---------GDCEGRLKLREPTRLQENRQLVQGFLDELRRANATANSAGPDYFRLFILEDAAQQCLQEL 699
            LSE L L +AEIFSPKELH+M LEHLHAY+  R +RVVL +LRRST+RM+  +R+KF E++++PA KA KRV +        + P     +   G+                        ++   DG +P  AA  AA +AAE + +F+GPL+EQ   ER L            E R AA   AV    G    A+   E+  ++ASDLS+AAYIGFALSAL    E SVC            G++D  A   SLARAEERL+G+VVD P+ DL+F L HGCR++Y    KRRR   EGG E G+ +  +   G        E AV GA+PW LRGVS LAYLVAC PR+RD WLPLVWSR TE  LFLPHAE LMRDRS+R+A KGLELACFVAERL  FPD +  A+AF+W+P DE     GD+      W GG                           GRQ+                 VL+DV+VSCPLP LR RGHAAL + L    E SRF +L+ L+  CPWPN                                                                             L RACR  P  SL+ DMDSRTGGL LARYA+ LD  GG          G   GRL LREP +L +NR LVQG LDELR A  TAN+AGP++FRLFILEDAAQQCLQEL
Sbjct:  130 LSEGLALAMAEIFSPKELHLMTLEHLHAYTKARTVRVVLTILRRSTERMATARRSKFLEASLRPALKAAKRVGLVAAAGDAPAEPGLRQKSS--GSDXXXXXXXXXXXXXXXXXXXXXXXLLPTADGDMPSSAAYDAAASAAETAADFIGPLMEQASAERALLAVSGLPTAGRGEGRPAA--AAVAXXXGGSGHAVGSGEKEGVSASDLSLAAYIGFALSALELAGETSVCXXXXXXXXXXXTGSEDNPAAGESLARAEERLIGIVVDSPL-DLRFALLHGCRVSYASGVKRRRRKSEGGGEEGKSQLPAARLGGAVG--LAEAAVNGALPWTLRGVSTLAYLVACEPRLRDKWLPLVWSRRTERRLFLPHAEVLMRDRSRRVANKGLELACFVAERLGGFPDRS-GAYAFDWEPGDEEIDGAGDDXXXXXXWNGG---------------------------GRQE-----------------VLVDVMVSCPLPGLRTRGHAALVAILSGADEASRFRLLRRLVELCPWPN-----------------------------------------------------------------------------LLRACRRGPLASLMADMDSRTGGLALARYAHKLDAVGGARADSGRAEAGAAWGRLGLREPKKLLQNRLLVQGLLDELRGAVITANNAGPEHFRLFILEDAAQQCLQEL 718          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig100.219.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSB3_9PHAE9.010e-16746.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1P6_ECTSI1.780e-13943.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013877YAP-binding/ALF4/GlomulinPFAMPF08568Kinetochor_Ybp2coord: 467..544
e-value: 4.1E-10
score: 38.8
IPR019516Glomulin/ALF4PANTHERPTHR15430FKBP-ASSOCIATED PROTEINcoord: 367..629

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig100contigD-herbacea_F_contig100:401894..406835 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig100.219.1mRNA_D-herbacea_F_contig100.219.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig100 401742..407027 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig100.219.1 ID=prot_D-herbacea_F_contig100.219.1|Name=mRNA_D-herbacea_F_contig100.219.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=702bp
MPTRGEKQAEEVVLSERLVLELAEIFSPKELHIMALEHLHAYSGERALRV
VLAVLRRSTQRMSPLQRAKFHESAMQPAFKATKRVAVSVRKYGGGSLPTT
DDATHVDGASSSDDEECNIPLGGVTNNATTDGGMMAGEDGLLPPWAALIA
AIAAAEASVEFVGPLVEQECEERLLEAREAANTTAVWAAAGQGSAAMVLR
ERAKMAASDLSVAAYIGFALSALAHTAEISVCTAAATATATGDGADDCEA
PAISLARAEERLVGLVVDGPVVDLQFVLTHGCRLAYVDRAKRRRGEGGWE
GGRERWMSRSSGYCASSRFGELAVAGAMPWPLRGVSALAYLVACVPRVRD
AWLPLVWSRPTECWLFLPHAESLMRDRSKRIAAKGLELACFVAERLERFP
DEAIDAFAFEWKPRDESTGDERWGGGDGVIETQQARFLPLTTTSGDPLRK
GTSGRQQQWWFDPCHRFDLASYLQVLLDVVVSCPLPNLRARGHAALSSFL
VATAEESRFHVLKHLINRCPWPNATGFLLDAFRREIDRVLRRTKRVADKR
DGVRSSRSSGMSATAMEMEREGGAATSVRAGEAACSPFASAPAGDVVCEQ
LRRACREAPPMSLLMDMDSRTGGLTLARYAYALDGTGGDGDCEGRLKLRE
PTRLQENRQLVQGFLDELRRANATANSAGPDYFRLFILEDAAQQCLQELL
L*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019516Glomulin/ALF4
IPR013877YAP-bd/ALF4/Glomulin