prot_D-herbacea_F_contig1.116.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1.116.1
Unique Nameprot_D-herbacea_F_contig1.116.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length251
Homology
BLAST of mRNA_D-herbacea_F_contig1.116.1 vs. uniprot
Match: D7FUB1_ECTSI (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB1_ECTSI)

HSP 1 Score: 345 bits (884), Expect = 1.210e-117
Identity = 166/214 (77.57%), Postives = 186/214 (86.92%), Query Frame = 0
Query:   36 KPPDKPVPTPEEEAERQAVQMRALDTVLKTKNAGEVSPPVYAEPADPFPENPAEALALDPLPPSVAGRKVIIAQKSKPATTTGDGGGLYCWNLTFKHQARNEQERWSNPLMGWTSTSDPMSNMKLSFSTPEQAVRFCKKRGWKYEVKAPSKREAVFGKFAYSHNFLPHNVEHEIKINGTKTEHFKFPTAGASHYDRPLNFEGTSTVRQHGNPEQ 249
            KPPDK  PTPEEE  ++  QMRALD VL+ +N   VSPP+Y+   +PFPENP EALALDPLPP+VAGRKVIIAQKSKPATTTG  GGLY WNLTFK     ++ERWSNPLMGWTST DPMSNM+LSFSTPEQAV+FC+KRGWKYEVKAP+KREAVFGKFAYSHNFLPHNVEH++K+NGTKT+ F FPTAGASHY+RPLNF GT+ VRQHGNPEQ
Sbjct:   33 KPPDKXKPTPEEEEAKKVAQMRALDVVLEAQN-NTVSPPMYSTRDEPFPENPEEALALDPLPPTVAGRKVIIAQKSKPATTTGTAGGLYGWNLTFK-----QKERWSNPLMGWTSTGDPMSNMQLSFSTPEQAVKFCQKRGWKYEVKAPAKREAVFGKFAYSHNFLPHNVEHDLKVNGTKTQQFTFPTAGASHYERPLNFVGTAPVRQHGNPEQ 240          
BLAST of mRNA_D-herbacea_F_contig1.116.1 vs. uniprot
Match: A0A7S4A6A8_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6A8_9STRA)

HSP 1 Score: 155 bits (393), Expect = 8.110e-43
Identity = 85/197 (43.15%), Postives = 113/197 (57.36%), Query Frame = 0
Query:   53 AVQMRALDTVLKTKNAGEVSPPVYAEP---ADPFPENPAEALALDPLPPSVAGRKVIIAQKSKPATTTGDGGGLYCWNLTFKHQARNEQERWSNPLMGWTSTSDPMSNMKLSFSTPEQAVRFCKKRGWKYEVKAPSKREAVFGKFAYSHNFLPHNVEHEIKINGTKTEHFKFPTAGASHYDRPLNFEGTSTVRQHGN 246
            A  +  L+ +   +N    +P +   P   A   P +P EA AL  +P     R V+I+QK++ ATT+        W L +K      +ERW+NPLMGWTST+DP+SN +L F T EQA RF  K GW +EV AP +R   +G   YSHNFL   VE ++K+NGT+T+HF  P   ASHY RPL F G     QHG+
Sbjct:   32 AADLANLERIKAERNRSVTAPHIAVVPDGLAPAGPAHPEEAAALMRIPEIHKKRTVVISQKAQAATTSASHASK-AWRLGWK-----TEERWTNPLMGWTSTADPLSNTELKFETAEQAARFATKMGWAFEVAAPIERNKQYGTNTYSHNFLQKWVETDLKVNGTETKHFARPRPNASHYFRPLKFHGDGECVQHGH 222          
BLAST of mRNA_D-herbacea_F_contig1.116.1 vs. uniprot
Match: W7TF31_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TF31_9STRA)

HSP 1 Score: 131 bits (330), Expect = 8.420e-34
Identity = 81/220 (36.82%), Postives = 117/220 (53.18%), Query Frame = 0
Query:   37 PPDKPVPTPEEEAERQAVQMRALDTVLKTKNAG---EVSPPVYAEPADP---FPENPAEALALDPLPPSVAGRKVIIAQKSKPATTTGDGGGLYCWNLTFKHQARNEQERWSNPLMGWTSTSDPMSNMKLSFSTPEQAVRFCKKRGWKYEVKAPSKREAVFGKFAYSHNFLPHNVEHEIKINGTKTEHFKFPTAGASHYDRPLNFEGTSTVRQHGNPEQA 250
            PP KP      E   + V   A ++ +K   AG   +V P + A+  D     P+   E   L+  P +   RKV I QK++ A  +      Y W +++       QERWSNPLMGWTST+DP+SN +L+F T E+A RF K++GW   ++    RE V G   Y+ NFL  +VE+++K  GTKT+ F  P   AS++ +PL + G     QHG P + 
Sbjct:   34 PPQKPXXXXSPEELEKMVS--ASESHVKEIRAGTMKKVQPYLVADVPDLPTYLPQKEEEMAVLNEQPANQRARKVTIRQKAQTAMQSA-ANKSYPWYISW-----GSQERWSNPLMGWTSTADPLSNQQLAFDTAEEAARFAKRQGWAVSIEPAISREQVLGTKKYAFNFLAEDVENKLKREGTKTKQFTNPGYTASNWFQPLKYHGDGECEQHGPPREG 245          
BLAST of mRNA_D-herbacea_F_contig1.116.1 vs. uniprot
Match: A0A7S2UYX7_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYX7_9STRA)

HSP 1 Score: 130 bits (326), Expect = 2.690e-33
Identity = 79/207 (38.16%), Postives = 108/207 (52.17%), Query Frame = 0
Query:   45 PEEEAERQAVQMRALDTVLKTKNAGEVSPPV-----YAEPADPFPENPAEALALDPLPPSVAGRKVIIAQKSKPATTTGDGGGLYCWNLTFKHQARNEQERWSNPLMGWTSTSDPMSNMKLSFSTPEQAVRFCKKRGWKYEVKAPSKREAVFGKFAYSHNFLPHNVEHEIKINGTKTEHFKFPTAGASHYDRPLNFEGTSTVRQHGN 246
            PE   E +  Q+RA       +N  EV+P +     Y    D  P NPAE   L  +P   + R V+I QK+K A T+G  G    W +T+K       ERW+NPLMGWTST+DPMSN+ L F + ++A  F  K GW +E+    +   V G  AYSHNFLP   E  ++  GTK + F      +SH+ R L + G   +  HG+
Sbjct:   40 PELSEEEKEAQIRAGMKETFAENQKEVTPWMVKDLPYVRSTD-LPANPAELATLTGMPQKQSNRTVVIRQKTKSAMTSGLQG-TKAWTITWKMG-----ERWTNPLMGWTSTNDPMSNLTLRFDSADEAKNFAIKNGWDFELHETPEVRTVAGNKAYSHNFLPKAFEETLREEGTKNKIFTRDAPNSSHFYRYLKYHGDGEIPFHGH 239          
BLAST of mRNA_D-herbacea_F_contig1.116.1 vs. uniprot
Match: A0A7S1FML6_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FML6_9STRA)

HSP 1 Score: 125 bits (315), Expect = 2.120e-31
Identity = 73/173 (42.20%), Postives = 92/173 (53.18%), Query Frame = 0
Query:   76 YAEPADPFPENPAEALALDPLPPSVAGRKVIIAQKSKPATTTGDGGGLYCWNLTFKHQARNEQERWSNPLMGWTSTSDPMSNM--KLSFSTPEQAVRFCKKRGWKYEV-KAPSKREAVFGKFAYSHNFLPHNVEHEIKINGTKTEHFKFPTAGASHYDRPLNFEGTSTVRQHG 245
            Y   A   PEN AE   LD        R V I Q +K A T+ +      W + + H+     E W NPLMG+ S +DPM+ +  ++ F TPEQAV FCKKRGW YEV  A +  +  FG   Y HNF     + +++  G K E +    AGASHY RPLNF GT  V QHG
Sbjct:   82 YKNDAAYLPENIAEFAVLDKAHDDQKHRTVTIKQYAKSAMTSNESNAR-AWYIDWDHE-----ENWENPLMGYVSGADPMNQVLKQMRFDTPEQAVAFCKKRGWTYEVGPADTDVQTEFGITQYEHNFFSKAAQVDVRTRGRKCELYHRSAAGASHYFRPLNFHGTDKVEQHG 248          
BLAST of mRNA_D-herbacea_F_contig1.116.1 vs. uniprot
Match: A0A7S1FL80_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FL80_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.870e-30
Identity = 64/146 (43.84%), Postives = 83/146 (56.85%), Query Frame = 0
Query:  103 RKVIIAQKSKPATTTGDGGGLYCWNLTFKHQARNEQERWSNPLMGWTSTSDPMSNM--KLSFSTPEQAVRFCKKRGWKYEV-KAPSKREAVFGKFAYSHNFLPHNVEHEIKINGTKTEHFKFPTAGASHYDRPLNFEGTSTVRQHG 245
            R V I Q +K A T+ +      W + + H+     E W NPLMG+ S +DPM+ +  ++ F TPEQAV FCKKRGW YEV  A +  +  FG   Y HNF     + +++  G K E +    AGASHY RPLNF GT  V QHG
Sbjct:    9 RTVTIKQYAKSAMTSNESNAR-AWYIDWDHE-----ENWENPLMGYVSGADPMNQVLKQMRFDTPEQAVAFCKKRGWTYEVGPADTDVQTEFGITQYEHNFFSKAAQVDVRTRGRKCELYHRSAAGASHYFRPLNFHGTDKVEQHG 148          
BLAST of mRNA_D-herbacea_F_contig1.116.1 vs. uniprot
Match: A0A485L9T4_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9T4_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.320e-29
Identity = 61/145 (42.07%), Postives = 84/145 (57.93%), Query Frame = 0
Query:  102 GRKVIIAQKSKPATTTGDGGGLYCWNLTFKHQARNEQERWSNPLMGWTSTSDPMSNMKLSFSTPEQAVRFCKKRGWKYEVKAPSKREAVFGKFAYSHNFLPHNVEHEIKINGTK-TEHFKFPTAGASHYDRPLNFEGTSTVRQHG 245
            GRK I+   ++    +G     + W + F       ++ W NPLMGWTS +DP++++ L F T E A  F K++GW  EV  P + E   GK AYSHNFLP +VE+++K  G K T HFK PT G SH+ + L + G   V QHG
Sbjct:   83 GRKAIVYMPARNQMQSGTYN-THHWEIRF-----GTRQTWQNPLMGWTSGADPVADLALKFDTKEAAADFAKRQGWTVEVFEPKETEDFEGKLAYSHNFLPLDVENKLKKYGKKATPHFKHPTGGHSHWVKTLKYHGNGEVAQHG 221          
BLAST of mRNA_D-herbacea_F_contig1.116.1 vs. uniprot
Match: A0A7R9YBA1_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBA1_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.060e-28
Identity = 57/123 (46.34%), Postives = 81/123 (65.85%), Query Frame = 0
Query:  124 YCWNLTFKHQARNEQERWSNPLMGWTSTSDPMS-NMKLSFSTPEQAVRFCKKRGWKYEVKAPSKREAVFGKFAYSHNFLPHNVEHEIKINGTKTEHFKFPTAGASHYDRPLNFEGTSTVRQHG 245
            Y W++T+     NE+ RW+NPLMGW S++DPM+    L F T EQAVRFC+KRGWKY+V+    ++    +  Y+HNFLP +VE  ++  G K + +K   A  S+Y RPL + G++TV QHG
Sbjct:  147 YSWHITW-----NERPRWANPLMGWRSSADPMNVGTDLQFDTAEQAVRFCEKRGWKYQVEDLPAKKMSMAENTYAHNFLPKSVEGNLRKEGRKNKIWKQNGAHKSNYFRPLEYHGSTTVPQHG 264          
BLAST of mRNA_D-herbacea_F_contig1.116.1 vs. uniprot
Match: A0A1V9ZM03_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZM03_9STRA)

HSP 1 Score: 117 bits (292), Expect = 2.050e-28
Identity = 60/149 (40.27%), Postives = 86/149 (57.72%), Query Frame = 0
Query:  102 GRKVIIAQKSKPATTTGDGGGLYCWNLTFKHQARNEQERWSNPLMGWTSTSDPMSNMKLSFSTPEQAVRFCKKRGWKYEVKAPSKREAVFGKFAYSHNFLPHNVEHEIKINGTKTE-HFKFPTAGASHYDRPLNFEGTSTVRQHGNPEQ 249
            GRK II   ++    +GD    + W + F       ++ W NPLMGWTS +DPM  M + F+T E+AV F +++GW  EV   +++E   GK AYSHNFLP +VE+++K  G K   HFK    G SH+ + L + G   V QHG  ++
Sbjct:   84 GRKAIIYMPARNQMQSGDYN-THHWEIRF-----GTRQTWQNPLMGWTSGADPMDAMVMKFNTKEEAVAFAQRQGWSTEVMPVAEKEDFEGKIAYSHNFLPLDVENKLKKYGKKAAPHFKHAAGGHSHWVKTLKYNGNGEVVQHGGDKE 226          
BLAST of mRNA_D-herbacea_F_contig1.116.1 vs. uniprot
Match: A0A1V9YYP1_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YYP1_9STRA)

HSP 1 Score: 115 bits (289), Expect = 5.420e-28
Identity = 71/213 (33.33%), Postives = 112/213 (52.58%), Query Frame = 0
Query:   46 EEEAERQAVQMRALDTVLKTKNAGEVSPP--------VYAEPADPFPENPAEALALDPLPPSVAGRKVIIAQKSKPATTTGDGGGLYCWNLTFKHQARNEQERWSNPLMGWTSTSDPMSNMKLSFSTPEQAVRFCKKRGWKYEVKAPSKREAVFGKFAYSHNFLPHNVEHEIKINGTKTE-HFKFPTAGASHYDRPLNFEGTSTVRQHGNPEQ 249
            EE+ +  A+    L+T  K +   +V PP        +  E + P+P+   E   ++ +     GRK II   ++    +GD    + W + F       ++ W NPLMGWTS +DP+  + L F+T E+A+ F +++GW  EV   +++E   GK AYSHNFLP +VE+++K  G K   HFK    G SH+ + L + G   V QHG  ++
Sbjct:   23 EEKVDDSALMKEILETQQKRRY--DVLPPHATTYENAIIGETSLPYPK---ECAVVNAVGGWTKGRKAIIFMPARNQMQSGDYN-THHWEIRF-----GTRQTWQNPLMGWTSGADPIDALTLKFNTKEEALEFAQRQGWSTEVMPVAEKEDFDGKIAYSHNFLPLDVENKLKKYGKKAAPHFKHAKGGHSHWVKTLKYHGNGEVVQHGGDKE 224          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1.116.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUB1_ECTSI1.210e-11777.57NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A7S4A6A8_9STRA8.110e-4343.15NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
W7TF31_9STRA8.420e-3436.82NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A7S2UYX7_9STRA2.690e-3338.16NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A7S1FML6_9STRA2.120e-3142.20NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A7S1FL80_9STRA1.870e-3043.84NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A485L9T4_9STRA1.320e-2942.07NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A7R9YBA1_9STRA1.060e-2846.34NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A1V9ZM03_9STRA2.050e-2840.27NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A1V9YYP1_9STRA5.420e-2833.33NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038532NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamilyGENE3D3.30.160.190coord: 101..187
e-value: 8.7E-24
score: 85.0
IPR006885NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrialPFAMPF04800ETC_C1_NDUFA4coord: 104..201
e-value: 1.4E-24
score: 86.1
IPR006885NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrialPANTHERPTHR12219NADH-UBIQUINONE OXIDOREDUCTASEcoord: 67..202
NoneNo IPR availablePANTHERPTHR12219:SF8NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 4, MITOCHONDRIALcoord: 67..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1contigD-herbacea_F_contig1:2896738..2904399 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1.116.1mRNA_D-herbacea_F_contig1.116.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1 2896431..2904399 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1.116.1 ID=prot_D-herbacea_F_contig1.116.1|Name=mRNA_D-herbacea_F_contig1.116.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=251bp
MLAARASSAASLRIVRSGTSLSVAAGRAASRPFSAKPPDKPVPTPEEEAE
RQAVQMRALDTVLKTKNAGEVSPPVYAEPADPFPENPAEALALDPLPPSV
AGRKVIIAQKSKPATTTGDGGGLYCWNLTFKHQARNEQERWSNPLMGWTS
TSDPMSNMKLSFSTPEQAVRFCKKRGWKYEVKAPSKREAVFGKFAYSHNF
LPHNVEHEIKINGTKTEHFKFPTAGASHYDRPLNFEGTSTVRQHGNPEQA
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006885NADH_UbQ_FeS_4_mit
IPR038532NDUFS4-like_sf