mRNA_D-herbacea_F_contig116.1180.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig116.1180.1
Unique NamemRNA_D-herbacea_F_contig116.1180.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
[Close]
BLAST of mRNA_D-herbacea_F_contig116.1180.1 vs. uniprot
Match: A0A6H5K8M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8M5_9PHAE)

HSP 1 Score: 320 bits (819), Expect = 6.990e-105
Identity = 161/223 (72.20%), Postives = 193/223 (86.55%), Query Frame = 1 
Query:    1 AKDCEGLRSLECVGSEHKNFHVTISKLAKAADKQFGGDVESVRRTPRLKEKALHTAIITHLYRRGAFRAAARFTEDSAAAIPPDTSSQLVEMHGVLDALAKKNLAPAERWFEKRKTALEGVGSSLEFQLARLRFLCILQAAGPEQRGEAVMFAKERLSPLTDRYLKEIKELMGSLLWAGRLEESPYSHLLSVDLWAQVRGAVVVDGSRAAGLARESILAVAFR 669
            A D  GL++L+ VGSEHKNFH TISKLAKAA+KQFGG+VESVRRTP L EKALHTAIITHLYRRGAFRAAA+F+EDS A+IP +T+S LVE+HGVLDAL K NLAPAERWFEKR+ ALEGVGSSLEFQLARLRFL  L++A P QR EA+M+A+ER+ P+   +++E++ELMGSLLW+G LE SPYSHLLS +LW +V+ +V VD SR +GL+RESIL+VAFR
Sbjct:  154 ASDVAGLKTLDAVGSEHKNFHATISKLAKAAEKQFGGNVESVRRTPALNEKALHTAIITHLYRRGAFRAAAKFSEDSTASIPAETTSHLVEIHGVLDALDKHNLAPAERWFEKRRKALEGVGSSLEFQLARLRFLRFLESADPGQRREAMMYARERVMPVAGGHMRELQELMGSLLWSGNLEASPYSHLLSQELWTRVKESVAVDASRISGLSRESILSVAFR 376
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BLAST of mRNA_D-herbacea_F_contig116.1180.1 vs. uniprot
Match: D8LT28_ECTSI (RING-Gid-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT28_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 2.590e-61
Identity = 99/149 (66.44%), Postives = 127/149 (85.23%), Query Frame = 1 
Query:  223 EDSAAAIPPDTSSQLVEMHGVLDALAKKNLAPAERWFEKRKTALEGVGSSLEFQLARLRFLCILQAAGPEQRGEAVMFAKERLSPLTDRYLKEIKELMGSLLWAGRLEESPYSHLLSVDLWAQVRGAVVVDGSRAAGLARESILAVAFR 669
            +DSAA+IP +T+S LVE+HGVLDAL K NL PAERWFEKR+ ALE VGSSLEFQLARLRFL  L++A P +R EA+M+A+ER+ P+  R+++E++ELMGSLLW+G LE SPYSHLLS++LW +V+ +V VD SR +GL+RESIL+VAFR
Sbjct:    2 DDSAASIPAETTSHLVEIHGVLDALDKHNLVPAERWFEKRRKALERVGSSLEFQLARLRFLRFLESADPGKRREAMMYARERVMPVAGRHMRELQELMGSLLWSGNLEASPYSHLLSLELWTRVKESVAVDASRVSGLSRESILSVAFR 150
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BLAST of mRNA_D-herbacea_F_contig116.1180.1 vs. uniprot
Match: A0A7R9U2J0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2J0_9STRA)

HSP 1 Score: 136 bits (343), Expect = 8.770e-35
Identity = 83/222 (37.39%), Postives = 119/222 (53.60%), Query Frame = 1 
Query:    1 AKDCEGLRSLECVGSEHKNFHVTISKLAKAADKQFGGDVESVRRTPRLKEKALHTAIITHLYRRGAFRAAARFTEDSAAAIPPDTSSQLVEMHGVLDALAKKNLAPAERWFEKRKTALEGVGSSLEFQLARLRFLCILQAAGPEQRGEAVMFAKERLSPLTDRYLKEIKELMGSLLWAGRLEESPYSHLLSVDLWAQVRGAVVVDGSRAAGLARESILAVAF 666
            ++D + L   E + + +K+FH  +SKL K  +K    D ++V + P L E  L   +  H YR G  + A    E     +  D  S L  +HG+  AL ++NL PA RW  +R+    G    LEF L RL+FL IL   G   + EA+ FA+ER     D +++EI++ MG+LLWAGRL++SPY  L S + W +   A +  G  A GL   S L VAF
Sbjct:   65 SRDLKELSPHERMMAAYKSFHAGLSKLQKKVEKLRPSDFDAVGKAPPLPEAPLRELVALHCYRSGYVQTAQELCERWGLDLSDDEVSALCRLHGIASALQQRNLKPALRWVAERR----GGTGELEFMLVRLQFLEILSQPGDAVQEEALAFAQERFPDFADGHMREIQQCMGALLWAGRLDKSPYRTLASEEAWQKSVQAFLEVGCEAEGLPMHSHLLVAF 282
[Close]
BLAST of mRNA_D-herbacea_F_contig116.1180.1 vs. uniprot
Match: UPI001C9CC378 (E3 ubiquitin-protein ligase RMND5A isoform X1 n=2 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9CC378)

HSP 1 Score: 120 bits (302), Expect = 9.160e-29
Identity = 74/217 (34.10%), Postives = 114/217 (52.53%), Query Frame = 1 
Query:   25 SLECVGSEHKNFHVTISKLAKAADKQFGGDVESVRRTPRL----KEKALHTAIITHLYRRGAFRAAARFTEDSAAAIPPDTSSQLVEMHGVLDALAKKNLAPAERWFEKRKTALEGVGSSLEFQLARLRFLCILQAAGPEQRGEAVMFAKERLSPLTDRYLKEIKELMGSLLWAGR-LEESPYSHLLSVDLWAQVRGAVVVDGSRAAGLARESILAV 660
            +++ + ++H+  H T+SK+ KA D+ F  D  S  R        K + L+  I  H YR+G    A     +              E++ +LD L ++NL PA  W +K K ALE   SSLEF+L RL F+ ++Q  GP ++ EAVM+A++ L     R  KE++ LMG+LL+    ++ SPYSHLL   LW  +      +     GL+ +S L+V
Sbjct:   70 TVQRLATDHRESHSTVSKVGKAIDRNFISDFASTSREDVFAGPEKTQLLNQVIFQHFYRQGMLDIADELAAEVGMKTDETKKEPFTELNYILDCLKQRNLEPALEWAKKHKPALEERNSSLEFKLHRLHFIRLVQQ-GPSRQAEAVMYARKYLRQYVRRNEKEVRSLMGTLLYLPNGIQSSPYSHLLDPTLWLDIHDVFTKEACTLLGLSVDSPLSV 285
[Close]
BLAST of mRNA_D-herbacea_F_contig116.1180.1 vs. uniprot
Match: A0A397JTR3_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397JTR3_9GLOM)

HSP 1 Score: 120 bits (301), Expect = 1.000e-28
Identity = 78/218 (35.78%), Postives = 111/218 (50.92%), Query Frame = 1 
Query:   22 RSLECVGS----EHKNFHVTISKLAKAADKQFGGDVESVRRTPRL---KEKALHTAIITHLYRRGAFRAAARFTEDSAAAIPPDTSSQLVEMHGVLDALAKKNLAPAERWFEKRKTALEGVGSSLEFQLARLRFLCILQAAGPEQRGEAVMFAKERLSPLTDRYLKEIKELMGSLLWAGRLEESPYSHLLSVDLWAQVRGAVVVDGSRAAGLARESIL 654
            R+LE   S    EHK     +SK  KA D+++  D+ ++   P     KE  L   I  H  R G FR    F  ++   +P     Q + M+ +LDA+   NL PA  W + ++  LE  GSSLEFQL RL F+  L     ++R EA+M+AK        R++KEIK LMG+L++  RL  SPY+  LS D W  ++     D     G+A +S L
Sbjct:   60 RTLESYASQASEEHKEIQKIVSKYEKAIDRKWKQDI-TIASNPEAFVSKETVLQRTIALHFIRHGKFRLGNTFIGETGLDLPNSLQMQFLRMYQILDAINNLNLEPALLWAKSQRDELERRGSSLEFQLHRLHFIKYLLE---QRRDEALMYAKTNFEYFQARHMKEIKRLMGALIYINRLSSSPYADFLSKDAWTDIQQTFTRDFCNLLGMACDSPL 273
[Close]
BLAST of mRNA_D-herbacea_F_contig116.1180.1 vs. uniprot
Match: U5CM20_AMBTC (Uncharacterized protein n=2 Tax=Amborella trichopoda TaxID=13333 RepID=U5CM20_AMBTC)

HSP 1 Score: 120 bits (301), Expect = 1.120e-28
Identity = 74/207 (35.75%), Postives = 108/207 (52.17%), Query Frame = 1 
Query:   43 SEHKNFHVTISKLAKAADKQFGGDVESVRRTPRLKEKALHTAIITHLYRRGAFRAAARFTEDSAAAIPPDTSSQLVEMHGVLDALAKKNLAPAERWFEKRKTALEGVGSSLEFQLARLRFLCILQAAGPEQRGEAVMFAKERLSPLTDRYLKEIKELMGSLLWAGRLEESPYSHLLSVDLWAQVRGAVVVDGSRAAGLARESILAVA 663
            S  K+ ++ + K  K  DK F  D+    R+    +  L+  I  H YR+G F     FT ++         +  +EM+ +L+A+  KNL PA  W    +  L   GSSLE +L RL F+ +LQ  G + R EA+ +A+  L+PL    + E++ LMG LLWAGRL+ SPY+ LLS   W  +   V  +   A G + ES L VA
Sbjct:   78 SSQKDLNMALGKYTKVIDKTFITDIAKAYRSVDFDQHTLNQIIAAHFYRQGLFDLGDLFTTEAHEPDLVSLKAPFLEMYAILEAMRLKNLEPALNWARTHRDQLLLKGSSLEMKLHRLAFVEMLQKGG-DARAEALAYARTHLAPLAXXXMAEVQRLMGCLLWAGRLDASPYAELLSPSQWELLENEVARECCGALGQSCESPLHVA 283
[Close]
BLAST of mRNA_D-herbacea_F_contig116.1180.1 vs. uniprot
Match: A9SBV1_PHYPA (Predicted protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9SBV1_PHYPA)

HSP 1 Score: 120 bits (300), Expect = 1.460e-28
Identity = 76/194 (39.18%), Postives = 99/194 (51.03%), Query Frame = 1 
Query:   28 LECVGSEHKNFHVTISKLAKAADKQFGGDVESVRRTPRLKEKALHTAIITHLYRRGAFRAAARFTEDS-----AAAIPPDTSSQLVEMHGVLDALAKKNLAPAERWFEKRKTALEGVGSSLEFQLARLRFLCILQAAGPEQRGEAVMFAKERLSPLTDRYLKEIKELMGSLLWAGRLEESPYSHLLSVDLWAQV 594
            L  +G   K  + T SK  K  DK F  D+    R        ++  I+ H YR G F     F ++S     AAA+     + L EM+  LD L  KNL PA  W  K + +LE  GSSLEFQL +L+F+ +L   G   RGEA+ +AK    P +  Y+  I+ LM  LLWA RLE SPY  LLS   W +V
Sbjct:   70 LSRIGVSQKELNTTTSKYGKILDKSFNPDIAKAYRDVEFDSHLINQIIVQHFYRLGLFELGDCFAKESQESNAAAAL----KTHLYEMYQNLDQLQAKNLEPALNWARKNRQSLEAKGSSLEFQLHQLQFVHVLTTKG---RGEALEYAKLNFLPFSAEYMSGIQRLMACLLWANRLEFSPYKDLLSSAHWDKV 256
[Close]
BLAST of mRNA_D-herbacea_F_contig116.1180.1 vs. uniprot
Match: A0A7S0MZH4_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MZH4_9CHLO)

HSP 1 Score: 120 bits (300), Expect = 2.620e-28
Identity = 73/213 (34.27%), Postives = 114/213 (53.52%), Query Frame = 1 
Query:   28 LECVGSEHKNFHVTISKLAKAADKQFGGDVESVRRTPRLKEKALHTAIITHLYRRGAFRAAARFTEDSAAAIPPDTSSQLVEMHGVLDALAKKNLAPAERWFEKRKTALEGVG-SSLEFQLARLRFLCILQAAGPEQRGEAVMFAKERLSPLTDRYLKEIKELMGSLLWAGRLEESPYSHLLSVDLWAQVRGAVVVDGSRAAGLARESILAVA 663
            L+ + S  K+F   ++KL K  DK F  DV    R     +  L+  I+ HL R G F    +  +D+   +P     Q ++MH VL+ ++  NL PA +W ++R+   +    + LEF+L RL+F+ +L   G   R +A+ +A+  LS    + ++EI+ LMG LL+A RL+ SPY+ LLS  LW ++R           G A+ES L VA
Sbjct:   78 LQQITSHQKDFQGALAKLKKTVDKHFLPDVSKALRDQPFDKATLNEVIVQHLLREGKFELGEQLMKDAIVQLPDGYKDQYIQMHQVLEQMSAFNLKPAIQWTQERRVEADTDALACLEFKLHRLQFVQLLHKEG---RAQALSYARAHLSTFASQQMREIERLMGCLLYANRLDRSPYADLLSPGLWDEIRHEFSRMCCSTLGQAQESPLGVA 287
[Close]
BLAST of mRNA_D-herbacea_F_contig116.1180.1 vs. uniprot
Match: UPI000E6FC848 (protein RMD5 homolog n=2 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FC848)

HSP 1 Score: 117 bits (293), Expect = 1.490e-27
Identity = 74/204 (36.27%), Postives = 106/204 (51.96%), Query Frame = 1 
Query:   52 KNFHVTISKLAKAADKQFGGDVESVRRTPRLKEKALHTAIITHLYRRGAFRAAARFTEDSAAAIPPDTSSQLVEMHGVLDALAKKNLAPAERWFEKRKTALEGVGSSLEFQLARLRFLCILQAAGPEQRGEAVMFAKERLSPLTDRYLKEIKELMGSLLWAGRLEESPYSHLLSVDLWAQVRGAVVVDGSRAAGLARESILAVA 663
            K  +V +SK AK  DK F  D+    RT       ++  I  H YR G F     F  ++      +  S  +EM+ +L+A++ +NL PA  W       L   GSSLE +L RL+F+ IL+      R +A+ +A+   +P    +  EI++LM SLLWAGRLE SPYS LLS   W ++   V+       G +RES L+VA
Sbjct:   79 KELNVALSKYAKLLDKSFNSDISKAYRTVDFDIHTVNQIIACHFYRLGHFDLGDCFIYEAKEPEIANLKSPFLEMYKILEAMSSRNLQPALTWASSNHALLIQNGSSLELKLHRLQFVEILKTGN---RDDALAYARAYFTPFAPLHFAEIQKLMASLLWAGRLESSPYSELLSPTHWEKLSEEVMEQFCSLIGQSRESPLSVA 279
[Close]
BLAST of mRNA_D-herbacea_F_contig116.1180.1 vs. uniprot
Match: UPI00201702C0 (protein RMD5 homolog n=1 Tax=Rhodamnia argentea TaxID=178133 RepID=UPI00201702C0)

HSP 1 Score: 115 bits (287), Expect = 2.330e-27
Identity = 68/190 (35.79%), Postives = 103/190 (54.21%), Query Frame = 1 
Query:   28 LECVGSEHKNFHVTISKLAKAADKQFGGDVESVRRTPRLKEKALHTAIITHLYRRGAFRAAARFTEDSAAAIPPDTSSQL----VEMHGVLDALAKKNLAPAERWFEKRKTALEGVGSSLEFQLARLRFLCILQAAGPEQRGEAVMFAKERLSPLTDRYLKEIKELMGSLLWAGRLEESPYSHLLSVDLW 585
            L  +    K  +V +SK  K  +K F  D+    R   L    ++  I +H YR+G F     F  +   A+ P++ + +    VEM+ +L+A+  +NL PA +W     + L+  GS LE +L R++F+ ILQ      R EA+ +A+  L+P    +L EI++LMG LLWAGRLE+SPY  LLS   W
Sbjct:   71 LTLLEGSQKELNVALSKYPKLLEKSFNPDISKAYRNVDLDTATINYVIASHFYRQGLFDVGDCFVTE---AMEPESIASIRSPYVEMYQILEAMKSRNLEPALKWATSNCSKLKANGSDLEVKLHRMQFVEILQRGN---RDEALKYARSHLAPFASDHLVEIQKLMGCLLWAGRLEQSPYPDLLSAANW 254
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig116.1180.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8M5_9PHAE6.990e-10572.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LT28_ECTSI2.590e-6166.44RING-Gid-type domain-containing protein n=1 Tax=Ec... [more]
A0A7R9U2J0_9STRA8.770e-3537.39Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
UPI001C9CC3789.160e-2934.10E3 ubiquitin-protein ligase RMND5A isoform X1 n=2 ... [more]
A0A397JTR3_9GLOM1.000e-2835.78Uncharacterized protein n=1 Tax=Diversispora epiga... [more]
U5CM20_AMBTC1.120e-2835.75Uncharacterized protein n=2 Tax=Amborella trichopo... [more]
A9SBV1_PHYPA1.460e-2839.18Predicted protein n=2 Tax=Physcomitrium patens Tax... [more]
A0A7S0MZH4_9CHLO2.620e-2834.27Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
UPI000E6FC8481.490e-2736.27protein RMD5 homolog n=2 Tax=Papaver somniferum Ta... [more]
UPI00201702C02.330e-2735.79protein RMD5 homolog n=1 Tax=Rhodamnia argentea Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig116contigD-herbacea_F_contig116:424469..432502 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score203.8
Seed ortholog evalue8.6e-50
Seed eggNOG ortholog2880.D8LT28
Preferred nameRMND5A
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0019538,GO:0019941,GO:0030163,GO:0032991,GO:0034657,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0071704,GO:1901564,GO:1901565,GO:1901575
EggNOG free text desc.proteasome-mediated ubiquitin-dependent protein catabolic process
EggNOG OGsCOG5109@1,KOG2817@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size670
Cds size669
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig116.1180.1prot_D-herbacea_F_contig116.1180.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig116 424470..432502 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927556.0056665-CDS-D-herbacea_F_contig116:424469..4246311622927556.0056665-CDS-D-herbacea_F_contig116:424469..424631Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig116 424470..424631 -
1690790230.447009-CDS-D-herbacea_F_contig116:424469..4246311690790230.447009-CDS-D-herbacea_F_contig116:424469..424631Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig116 424470..424631 -
1622927556.0150132-CDS-D-herbacea_F_contig116:428195..4282851622927556.0150132-CDS-D-herbacea_F_contig116:428195..428285Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig116 428196..428285 -
1690790230.4617136-CDS-D-herbacea_F_contig116:428195..4282851690790230.4617136-CDS-D-herbacea_F_contig116:428195..428285Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig116 428196..428285 -
1622927556.0245934-CDS-D-herbacea_F_contig116:429314..4294051622927556.0245934-CDS-D-herbacea_F_contig116:429314..429405Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig116 429315..429405 -
1690790230.471104-CDS-D-herbacea_F_contig116:429314..4294051690790230.471104-CDS-D-herbacea_F_contig116:429314..429405Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig116 429315..429405 -
1622927556.0344791-CDS-D-herbacea_F_contig116:430933..4310341622927556.0344791-CDS-D-herbacea_F_contig116:430933..431034Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig116 430934..431034 -
1690790230.4798627-CDS-D-herbacea_F_contig116:430933..4310341690790230.4798627-CDS-D-herbacea_F_contig116:430933..431034Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig116 430934..431034 -
1622927556.0472662-CDS-D-herbacea_F_contig116:431462..4315881622927556.0472662-CDS-D-herbacea_F_contig116:431462..431588Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig116 431463..431588 -
1690790230.4904373-CDS-D-herbacea_F_contig116:431462..4315881690790230.4904373-CDS-D-herbacea_F_contig116:431462..431588Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig116 431463..431588 -
1622927556.0574782-CDS-D-herbacea_F_contig116:432403..4325021622927556.0574782-CDS-D-herbacea_F_contig116:432403..432502Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig116 432404..432502 -
1690790230.508015-CDS-D-herbacea_F_contig116:432403..4325021690790230.508015-CDS-D-herbacea_F_contig116:432403..432502Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig116 432404..432502 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig116.1180.1

>prot_D-herbacea_F_contig116.1180.1 ID=prot_D-herbacea_F_contig116.1180.1|Name=mRNA_D-herbacea_F_contig116.1180.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=223bp
AKDCEGLRSLECVGSEHKNFHVTISKLAKAADKQFGGDVESVRRTPRLKE
KALHTAIITHLYRRGAFRAAARFTEDSAAAIPPDTSSQLVEMHGVLDALA
KKNLAPAERWFEKRKTALEGVGSSLEFQLARLRFLCILQAAGPEQRGEAV
MFAKERLSPLTDRYLKEIKELMGSLLWAGRLEESPYSHLLSVDLWAQVRG
AVVVDGSRAAGLARESILAVAFR
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mRNA from alignment at D-herbacea_F_contig116:424469..432502-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig116.1180.1 ID=mRNA_D-herbacea_F_contig116.1180.1|Name=mRNA_D-herbacea_F_contig116.1180.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=8034bp|location=Sequence derived from alignment at D-herbacea_F_contig116:424469..432502- (Desmarestia herbacea DmunF female)
GCGAAGGATTGCGAGGGGCTGAGGTCGCTGGAGTGCGTGGGGTCGGAGCA
CAAGAACTTTCACGTGACGATTTCGAAGCTCGCGAAGGCGGCTGACAAGG
TGAGAGTTTTTGTTGTGTGGTCGTGATAATATATATATATATATATACTA
CGGTACCTGTGGTAATAGTGATGGCTCGTGGGAGGTTGTTTCGAGGGCGA
AGGGTACGTAGTAGGTGATGTGTGTGCACGTGTGTCGGTGTTTGTGTGTG
TGTTTGAAAATGTTTTTGGCAGGAGGTGATATAAATGTCTTTTTTTTTTT
TTTTTTCGGGTATCGTATTAATAGCTGACTCACTGAAATTGATGGGGTCG
CCCGCTCGGGGGGTGAATGTACTGTACGAGTAGGCTTCGACGAATCAAAT
CATCACTGACACCCGATGCTTACCTTTAGCTATGCTGTATGTGCTGAACT
TTTTCCCTCGAAAGTTTTTTTTCGATACCGGTTAATCCTACAGCAGGTAG
ATGGCAGATGACCAGATATCAGATGGCGCAAAATTTATTTTTTTCTCCCC
CCCCTCCTCCCCCCTCTTCACGAGTGGTTCTTAGTAAGATGCAGCTCACC
CTTCATGCGAATCGGCGAACACCTCACGGCGCTTCGCGCTTGGTGCACGC
GATGTCTGCCTGGTCGGTGAAAAACCCGACGTGCTCTGTCCCGGCATTGT
AGGGATGCGAGGGTTTATGGTCATACTTCGAAGTATAATACGACTACGGC
CATGCATGAAATGAGCCCCCCCCCCCCCCCCCTCCCGCCCTCTCCGTCTC
GAAAGGGGTGCGTGTTCAATGGCCAACTAGCCAAGGCAAGCAATAAATGA
ATACCCCCCCCGCCCCTTCCCCTCTTTTTGTGTGCATGTGTGTGTGTGTG
ATTTCTCCTGACAGCAATTTGGAGGCGACGTGGAGAGCGTGCGAAGAACG
CCTCGCCTGAAGGAGAAGGCTCTTCATACGGCCATCATAACGCACCTCTA
CCGCAGGGGGGCTTTCCGTGCTGCGGCGAGGTTTACCGAGGTGTGCCGGA
CATCAGACACACGTGGAACTTGCGCTTGCCCTACTGTTATTGTCAACCAT
TGTTGTTGTTGTCATCCATTGTTATTGTTGTTGTCAACCATTGCTGCTGT
TGCTGTTGTTGCCGTTAGGACCGACCCTCAGACAATATATATATTTATAT
ATATATATACTTCGAAGTATATATATTGTGGTTTGCTTTTTGTACGCGAT
TTCTTGTGTCGTTAGACTACAGTAGTGGTTACAGTAGTAGACTTGTACCC
GTTTTTTTGTGAGAGTATGGGTACGTAGGAGGGTCAATCAATATTGCTCT
ATCATAAGACACATGGCTTGTTTGTGTATGCGGGTGGGTGAGAGCAAGCA
AAGAAGACGCCCATCATTCGACTCGCGTTTTGTGTGTGTTTGTTTTTGCT
TTGTGTTTATTTTTGCAGGACTCTGCGGCGGCAATACCCCCGGATACGTC
CTCTCAGCTCGTTGAGATGCATGGCGTACTGGACGCCCTGGCCAAGAAGA
ATCTTGCCCCGGCCGAACGGTGAGGATTGAGATTCTGAAAGCGAAAGAGG
CGGGGGGGGGGGGGGGGGGGGGTACTCATTTGTTGCTTGCTTGTTTAGTC
ATTTGACCATTGGCCATGCATCCCTGTCGAGGCGGGGCACCGTTCCTACT
CCTAATAGACACCTTTTTAAGGCGCTCTTTACGCTTTTGCCGTATCTTAC
GTAGAAACATTTTGCTTGTCTTATATTATCCCCTTCCTGTTTCGCCTCTC
TTGTCGCCACCATCTATCCCCTAGGATAGCGATCGTTTTCTCGCGGTTAT
CTAGTGTGCCTTTTGCTGGGAGAGGGGAGGGGGGCGTACTCACTTGTTGC
TTGCCTGGGAGGGGGTGCAAGGGCGTGTAGGCAACAGGCTATCATCAAGA
GTCGTTCAATGGAGGCCGGGAGGCAACACATCTCCCAACACCTTAGCAGG
GAGAACGTAAGAAAAGCGCCAACTCATATCTGTTGCCACTGGCGCTACTG
GCATAGAGCAACAGGCGGACGTCATGTATCCTGGAGCCAAGTTAATGACA
TGGGGGGATGTCTTGGGGGGGGGGAGTACCGTCGTTGTTGACCGCTGACC
TCACATCCTGTAGTGTCGCCTGGTGGGACGGATCGACGTCGACGTGCCTG
CCGGGTGTTTTGCACCGGCCAGGTTGCGTTTGTACAAGCAAGGGCGAAAA
TATTATACCATGGTCTACCAGCCTGCTGTTGTTCTTACAATCGACGGGGA
GAGTTTGATTGCCTTGATGGAGCAAAATCACGCACAGATATATAGATGGA
CAGATAGATAAGCTTGATACTTCCAAGTAAATATATACGAAGTATATATA
TATACATATTTTTTTTTTGCGTCCCATTTATTATCTTCGCCCTATTAATA
GTCTTACTCTATCATAGCTCCATCTCTCTTCGGAACTCAGATCCGGGGTC
ACATAGTAGGCGCTCCTCCCTCCTTCCCACTACGGTACGTGCCTACATTT
TTATCGCGGGAAGAGTGCAGCACTTTCTTCCCTCGTCGACTTTCATCGAA
TTGTGCTTACTCACGCTCTTCTTGCGTTTTCCGCGACGGAAAATGACACA
GAAAAGTGCCACCGGGAATCGAACCCCCAACTTCCGCCAACAGAGGAAAT
ACCCTAGCCATTAGACCACTGGGCCACCCCCTATACTGTATATATATATA
TATATATGCTTCGTATACTACTTCGAAGTATAATATTATAGTGGGCTCGA
AACCAATAATGACGTTTTTACCCCACGCCAAGAGTCACGCGCATCATTTT
CTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC
TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT
CCTTCCTTCCTTCCTTCCTTCCTTCCTGCCTCCCTTCCTGCTCCCTTTCT
TTTTCTTCCTTTCGTCCTTTGCTTATTGCCTTACCACCTCTTCGTTTGCG
TGAATACTACTACTACTACTGTGTGTGCGACTTAATGCCATCCGCAGGTG
GTTTGAGAAACGAAAAACCGCACTGGAAGGGGTCGGGAGCTCGCTGGAGT
TTCAGCTGGCTCGTTTACGTTTTCTTTGTATTCTACAGGTTTGGCTCTAT
AAATATTGAGGGATTGTGGCATGCATGTGCACCGTCGAGAGGGTGGGGGG
AAGGGCGGGGACGGGAGGGGGGAGGTACTCATTTGACGATCGACCACGCA
TCCCTTTCGAGACCGAGCAAAGTTCCTGCTCCTAATGGAGACACCTCCAA
CATTCGGGGGCTCTTTGCTTTTTTGCCATATCTTACATAAAAAACCTTTT
GCTTGTCTTATACCCCCTTCCTGTTTCACCTTTTGTGGCCACCATCTATC
TCCTAGGATAGCGATCGTGTTGTCGCTATTATCCGGGGTACCAAGTTTGA
CCATCGACCACGGAGGGGGTGGGGGGGGGCGTACATGTACGGCTTTTGTC
CTGGATAAGGGTTGCTCGTGGCACGGTACGGTGCGAGTTTTAGTGCTGTA
TGATTCTCGGTGTACTACAGTGCATAATGTAGTAGTGGTAATAGCAGCAG
GAGTAGTATAATACTAGCAGGAGTAGTAGTAGCAGTAGTAGTAGTAGTAG
TAGTAGCAGAAGCAGAAGCAGCAGTAGTAGCAGTACTTGGTGTTGTTGAT
TGTGTTGTTCTCATGTTTAAGGTCGTGGCTTTAACGTGGGCCGTGGTCAC
AAGACAGGTGCGGACCGCGTTCTGGAGGGCAAACGTAGTGCACCATCCGC
GCAACGACAGCGACCGGTTTTTTTTTATATCACTTTTTTTTAGTATTTTT
TTGTTGTCGTTTGCCATATTATAGAGGGTTACGGTATTTCTTTACGCTCC
CAACCTTCTACCGCTTGTGATAGCTGCGTCTTGATGTGCTGATTTACGCT
TGTTGTAGAACACAACGTTGTTGCCATTACCGTACCGGTACGTCGGAGGC
TCCTATTGGAGTACTCAGGCACGGGATATCGCCACTACTGCTAGGCAACC
CCCTCCTCCTCGGTGTAGCATGGGAGACGTACTGGCCGTAAGCTCACACC
CCGCTGACAAAGTGTTTCTTGTTGTCTTGATTGTGTTTTGCTGCCTTGTG
TCGTGGGGGGGATACAGGCTGCCGGTCCGGAGCAGCGAGGGGAGGCCGTG
ATGTTCGCCAAGGAGCGACTGTCGCCGTTAACGGACCGGTACCTGAAAGA
AATAAAGGTGCGTGTTTTGTCAACCATTGCTGTTGTCAACCGTTGTTGTT
TTTGTCAACCAATGTTGCTATTAGCTATTGCTGTTGTTGTTGTTGTCGCG
TGTTGTTTGCTGATGATGCATATGCGAGAGAGGCGTAGGGGTGACTTTGG
GCGCGTGTGCATTTTTTGTTTTTTGGTTCTTGTGTGACAGCATGTATAGC
AGTTTTTGAGACATATGCTCTAGAACTAAAGAAGAGGGGCATGGTGAGAT
TTTTTGTTGTTGCGTGCGGTTTGTGTGTGTGTGTGTGTGTATGACATAAT
ACGACATACCGGCGGGGAGAGCAATCGTACTTTTGCGTGCGTGGCTTGTG
TACCTGTGTGATCGTGTGTTATCCTGTGGGCGAGCCAAAAAAAAAAAACA
CACACACACACAAGACACGGCAGTTTGTGGACCTTTAGCTTTATTTTTTT
TACCCGTCGGCGGAGAGCAATAAACAAAAGATGTAATTGGATTGTTGAAG
TCCTGTGAACCTAATTCTCAAGATAGATGTAGTTACACGACGGGAATATG
TGCTGCACATTGTCGGATGGCAATACTTTTATGATGGTAATTTTAAATAT
AAACAAGAACACTCTTGTGCTCCAAGCAAACGTTGCAGCAAAAAAAAGCT
GACCTGGAACGAGCGAGCGAGCGAGCGAGCTCCCCCCAGTCGATAAGCCT
TCATCTCCTCGAACATCCCCGCAAGGCAATGCGCGTCTAATGCCGCATAC
TGCACCTTGAGTCCATCGATAGTGGCCTCAAACATGTACATGGGCACACA
CACAGCAAAAAAAAAAAAAAAAAAAGGCCAACCGAGAATAGCGTTTCTTC
GTTTTTTGTTCCTTATATGCTATTGCCCTTGCCTACTATGCTGCGCAGCA
TTATACGAAGTATTGCTCTAATATCAGGACTATACGATATCATACCCAGC
TTTTTTCGGAAGTGTCCATCTTTGACCGAAATTGAGAGACTGTGCATTAA
TAATAATTATTTAGTTTTTTCACTTCCGAAGGAGGCGATTTGGATCTTTA
TTACTTAAGTACCGTAAGTTTCGTCTGAATTCGGTACTTTAATCAAGAGA
TGTTTCGTCGTCCCTCGGTTGCCTTTTCTTTTACGTCACAACACTCACAA
CAACATCAACACTCAAAGGTTGGATTTGTGTTGGGTTGGGTTGGGTTGGG
TTGGGTTGGGTTGGGTTGGGTTGGGGCAGGATGTCACCCACCCTTCGAAC
GCGCACATTGCACGAGCAACGCCGTGGTGGTGCCTACTGGTCAAAAAAAT
ATTTTTGTACTTTTTTTTTCAGTGGGTGGATCTTTATAATAGAGGTTTTG
ACTTGCTATTAGTATAGGTGTGTTCGTGTGTCCGTTAGGGTTCGGGGTTA
GGGTTAGTGGTAGAATTTTCCGAAACTGCTGAACAGCCCACGTTGCTACT
ATCAATCAATATTAACAATCATACTAGTATACTGGTAGTAAGACGAAAGT
CTTATTGGTCTGCCCCAAAAAAACAAATTGACATCGGACAGGGGTGGCGC
AGTGGTCTAATGGTTATAGGGTGTTGCCTCTGTTGGCGGAAGTTGGGGGT
TCGATTCCCGGTGGTGGCACTTTTCTGTGCCATCTTCCGTCGCGGAAAAC
GCGAGAGCGGTGAGTAAGCACAATTCGATGAAAAGTCGACGAAGGAAGAA
AGTGCTTGCACTCTTCTCGCGATAAAAAATGTAGGCACGTACCGTAGTGG
GAAGGTGGGAGGATTGCCTGCTATGTGACCCCGGATCTGAGTTACGAAGA
GAGATGGAGATATAGGGAAAGAATAGAGCGAAGATAATAAATGGGACGGG
AAAAAAAAAACAAAACAAAAAACGTACGAGTAAGGCGACTCAGTTAAAAG
TACTGAAAATTGCTCCCCAAAGACTTACAACTCGTGGCCGACGGTGTGTA
GTAGTAGTTTCGACGAGGTACCCACCACTACTAGCATCTCACGTCCCTCG
CAGATCGTTTGCGCATTTTAATGTTGTACGACTACTACTACTGTTGTTGC
GATTGTATTGTACTATCATACCGCTTCGTAGTGTCTGCTGCTGTATTTTT
GCTGTTTGTATCTTTGCGGTATTTGGAAGCAAGTATCAACCATAAAAAAA
TAAAATTAAAATTAAAAAAAAAAACGTCTGTCAATAACATATGTGTCGTT
GGCTCCTTCCAAACACGAGGGTTAGAGCATGCGCACACCGAATTTGATGA
TGTAACGACCAGTTGTATTCCCATGTTACCGATGTTGTCGTTACTACTGT
TGTATGGGGTATCCTCACAATCACTCACAATTATCCTGTGGGAGACTCTG
GGCTTTTATTGTTTTTGTTTGAATGAATTTTCACTTCCGAAGGAGACCCC
AAAATTATCCTGTAGCAGAGCCTGGGACGTCCCAGGGGAGTCGCTGCGTT
GTACCTTATCTGAGGACCGATAGACCCGCGCGATTGGTGTATCACACAGT
GAGATTGGCGATTATCCCCTGGCCCCCGAACCAGTTTGGAACGTCACGGC
TGATTCTATCTATTTGTGAGTAAAAACATGAAAAAATGGTCGTACTTTTC
TACCTCGACGAAATCCAGTAAGTTGCTACTCAGAGTCTGTACTGATTCCT
ACATCCTAGAGAGATGATAAGATATTCTGTGGCCAATACAAGCTATGATA
TACTTCAGTATGCATTTTTTCCTACAACAGTTGGTTCTATGCTGTTTGTT
GTAGATATTCGTTATTATTAGTGCCTTTGCCATCCGACAAATGTAATAAT
TGTTTGAATTGATTGATTTTTCACTTCCGAAGGACACGATAATTGTAATA
ATTGTTTGAATTGATTAATTTTCACTTCTGAAGGAGACGATTAAAAAAAA
ATATTACAATATAATATTTATAATAATTGCTTGAATTAATTATTTTTCAA
TATAATATTTACAATTACAGTTTGCAGTTAATTAATTTTCTCTTCGACAG
TATATTACTATTAATAGATAGGTTTATATACTGTAGTGGTATAGTTGTTG
TGTAGTAGTAGTAGTGGTACAGTAGTAGTAGGTAGTACTAGTAGGTAGAA
ATTCTATTAATAGTACTCGTATGAAACGCCAAAAAAATAATTAATTGATA
CTAATTCAAGACATTAATTAATTTTCACTTTCGTAGGAGACGATATATCT
CGATGCCCAATATTTGGTTGATTATTATTAGTTTTGCCTTCCGACAATGC
TACATTTCTTTGAATTAATCAATTTTCCTTCCCGAAGGAGACGTAATAAT
TGTTTGAATTAATTTTTTTTCACTTCCGAAGGATAAGGATAATAATAATA
GTAACAATAACAATAATAATAATAATAATAATAATAATAATAATAATAAT
AATAATAATAATAATAATAATAATAATAGTTTGAATTCATTAATTTTCAC
TTCCGAAGGAGACGATAAGATGGTACAGTATTGAGGGCGTTCTGTGCTGC
TATTGTGTTATACTATACTTTCTCTTTTTTGTGTTTGCTGATGTTGCGCG
GTATGTTGTGTTGCGCGGCAGGAATTGATGGGAAGCCTGTTGTGGGCGGG
CCGGCTGGAAGAGTCTCCGTACAGCCATCTCCTGTCGGTGGACCTGTGGG
CGCAAGTGCGGGGGGCTGTTGTGGTGGACGGGAGCAGGGCGGCCGGACTA
GCGAGAGAGAGCATTCTCGCGGTGGCGTTTAGGG
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Coding sequence (CDS) from alignment at D-herbacea_F_contig116:424469..432502-

>mRNA_D-herbacea_F_contig116.1180.1 ID=mRNA_D-herbacea_F_contig116.1180.1|Name=mRNA_D-herbacea_F_contig116.1180.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1338bp|location=Sequence derived from alignment at D-herbacea_F_contig116:424469..432502- (Desmarestia herbacea DmunF female)
GCGAAGGATTGCGAGGGGCTGAGGTCGCTGGAGTGCGTGGGGTCGGAGCA
CAAGAACTTTCACGTGACGATTTCGAAGCTCGCGAAGGCGGCTGACAAGG
CGAAGGATTGCGAGGGGCTGAGGTCGCTGGAGTGCGTGGGGTCGGAGCAC
AAGAACTTTCACGTGACGATTTCGAAGCTCGCGAAGGCGGCTGACAAGCA
ATTTGGAGGCGACGTGGAGAGCGTGCGAAGAACGCCTCGCCTGAAGGAGA
AGGCTCTTCATACGGCCATCATAACGCACCTCTACCGCAGGGGGGCTTTC
CGTGCTGCGGCGAGGTTTACCGAGCAATTTGGAGGCGACGTGGAGAGCGT
GCGAAGAACGCCTCGCCTGAAGGAGAAGGCTCTTCATACGGCCATCATAA
CGCACCTCTACCGCAGGGGGGCTTTCCGTGCTGCGGCGAGGTTTACCGAG
GACTCTGCGGCGGCAATACCCCCGGATACGTCCTCTCAGCTCGTTGAGAT
GCATGGCGTACTGGACGCCCTGGCCAAGAAGAATCTTGCCCCGGCCGAAC
GGACTCTGCGGCGGCAATACCCCCGGATACGTCCTCTCAGCTCGTTGAGA
TGCATGGCGTACTGGACGCCCTGGCCAAGAAGAATCTTGCCCCGGCCGAA
CGGTGGTTTGAGAAACGAAAAACCGCACTGGAAGGGGTCGGGAGCTCGCT
GGAGTTTCAGCTGGCTCGTTTACGTTTTCTTTGTATTCTACAGGTGGTTT
GAGAAACGAAAAACCGCACTGGAAGGGGTCGGGAGCTCGCTGGAGTTTCA
GCTGGCTCGTTTACGTTTTCTTTGTATTCTACAGGCTGCCGGTCCGGAGC
AGCGAGGGGAGGCCGTGATGTTCGCCAAGGAGCGACTGTCGCCGTTAACG
GACCGGTACCTGAAAGAAATAAAGGCTGCCGGTCCGGAGCAGCGAGGGGA
GGCCGTGATGTTCGCCAAGGAGCGACTGTCGCCGTTAACGGACCGGTACC
TGAAAGAAATAAAGGAATTGATGGGAAGCCTGTTGTGGGCGGGCCGGCTG
GAAGAGTCTCCGTACAGCCATCTCCTGTCGGTGGACCTGTGGGCGCAAGT
GCGGGGGGCTGTTGTGGTGGACGGGAGCAGGGCGGCCGGACTAGCGAGAG
AGAGCATTCTCGCGGTGGCGTTTAGGGAATTGATGGGAAGCCTGTTGTGG
GCGGGCCGGCTGGAAGAGTCTCCGTACAGCCATCTCCTGTCGGTGGACCT
GTGGGCGCAAGTGCGGGGGGCTGTTGTGGTGGACGGGAGCAGGGCGGCCG
GACTAGCGAGAGAGAGCATTCTCGCGGTGGCGTTTAGG
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