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Homology
BLAST of mRNA_D-herbacea_F_contig112.989.1 vs. uniprot
Match: D8LC14_ECTSI (RF_PROK_I domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC14_ECTSI) HSP 1 Score: 226 bits (575), Expect = 1.700e-66 Identity = 116/153 (75.82%), Postives = 139/153 (90.85%), Query Frame = 2
Query: 614 SRGVHDQ--LTLREQFSGEIPEDQLQMSFSRSSGSGGQNVNKLSTKVELRFVVADAEWLPHDVRLRMARHQRARINNRGELVITAQEFRTQKQNRTQALHKLREMINEAWEPAKERKMRTGISKAGKEIRKADKRHRSQVKAGRSKLSSRDFD 1066
+RG+HD+ T R + GE+PEDQLQ+SF+R+SG+GGQNVNK+STKVE+RFVV++AEWLP+DVRLR+AR ++ R+NN+GELV+TAQEFRTQKQNR+QAL KLREMINEAWEPAKERKMRTGISK GK IRK DK HRS+VKAGRSKLSSRD+D
Sbjct: 98 ARGLHDRRPYTPRPKSFGEVPEDQLQVSFTRASGAGGQNVNKVSTKVEMRFVVSEAEWLPYDVRLRLARQEKGRMNNKGELVVTAQEFRTQKQNRSQALAKLREMINEAWEPAKERKMRTGISKKGKAIRKQDKLHRSKVKAGRSKLSSRDYD 250
BLAST of mRNA_D-herbacea_F_contig112.989.1 vs. uniprot
Match: A0A1Z5KFY9_FISSO (Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFY9_FISSO) HSP 1 Score: 125 bits (314), Expect = 3.190e-29 Identity = 72/141 (51.06%), Postives = 95/141 (67.38%), Query Frame = 2
Query: 626 HDQLTLREQFSGEIPEDQLQMSFSRSSGSGGQNVNKLSTKVELRFVVADAEWLPHDVRLRMARHQRARINNRGELVITAQEFRTQKQNRTQALHKLREMINEAWEPAKERKMRTGISKAGKEIRKADKRHRSQVKAGRSKL 1048
HD + E +IPE+ L SF RSSG+GGQNVNK++++V+LR V +A W+P++VR R+ + Q RI+ G L I AQE RTQ NR A+ KLR+M+ +AW KER++R GIS KE RK KR RS VKAGR K+
Sbjct: 88 HDNWKVPEYI--DIPEENLDFSFVRSSGAGGQNVNKVNSQVQLRLNVNEAYWIPYEVRQRLMQQQANRISKEGVLTIAAQEHRTQVANRKAAIQKLRDMLLQAWPRPKERRIRQGISIKTKEQRKEFKRRRSDVKAGRKKV 226
BLAST of mRNA_D-herbacea_F_contig112.989.1 vs. uniprot
Match: A0A7S2PK85_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PK85_9STRA) HSP 1 Score: 126 bits (316), Expect = 3.340e-29 Identity = 64/128 (50.00%), Postives = 93/128 (72.66%), Query Frame = 2
Query: 665 IPEDQLQMSFSRSSGSGGQNVNKLSTKVELRFVVADAEWLPHDVRLRMARHQRARINNRGELVITAQEFRTQKQNRTQALHKLREMINEAWEPAKERKMRTGISKAGKEIRKADKRHRSQVKAGRSKL 1048
IPEDQ+Q+SF+R+SG+GGQNVNK++TKVELRF + A W+P +VR R+ ++ RINN G IT QE RTQ QNR +A+ KL++++ +W+ K RK+R G++K KE R+ +K+ SQ K R ++
Sbjct: 126 IPEDQIQLSFARASGAGGQNVNKVNTKVELRFHIDSANWIPREVRDRLKTNEAGRINNEGYFAITCQENRTQVQNRKEAIKKLQDILKSSWDRPKVRKLRKGLTKKAKENRRENKKKISQKKENRRRV 253
BLAST of mRNA_D-herbacea_F_contig112.989.1 vs. uniprot
Match: B8C3Q8_THAPS (RF_PROK_I domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3Q8_THAPS) HSP 1 Score: 120 bits (302), Expect = 9.950e-29 Identity = 66/125 (52.80%), Postives = 87/125 (69.60%), Query Frame = 2
Query: 665 IPEDQLQMSFSRSSGSGGQNVNKLSTKVELRFVVADAEWLPHDVRLRMARHQRARINNRGELVITAQEFRTQKQNRTQALHKLREMINEAWEPAKERKMRTGISKAGKEIRKADKRHRSQVKAGR 1039
IPEDQ+Q SF+RSSG+GGQNVNK+ TKVELRF + A W+P +VR R+ ++ RINN G + + +QE+RTQ QNR AL KL +++ +W K RKMR G+S KE R+ K+ SQ KA R
Sbjct: 3 IPEDQIQTSFARSSGAGGQNVNKVETKVELRFHLDSASWIPAEVRERLKTNEANRINNDGFMSVNSQEYRTQVQNRKDALKKLEDILRNSWARPKVRKMRKGLSAKTKENRREMKKKISQKKANR 127
BLAST of mRNA_D-herbacea_F_contig112.989.1 vs. uniprot
Match: W7T6I3_9STRA (Peptidyl-trna hydrolase mitochondrial-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6I3_9STRA) HSP 1 Score: 122 bits (305), Expect = 3.860e-28 Identity = 66/126 (52.38%), Postives = 87/126 (69.05%), Query Frame = 2
Query: 662 EIPEDQLQMSFSRSSGSGGQNVNKLSTKVELRFVVADAEWLPHDVRLRMARHQRARINNRGELVITAQEFRTQKQNRTQALHKLREMINEAWEPAKERKMRTGISKAGKEIRKADKRHRSQVKAGR 1039
EIP D+L S+SRSSG GGQNVNKL+T+VELRF V DA+W+P D+R R QR R+N GE V+++QE RTQ +NR + + KL E + A K R MRTG+++ KE R +K+ RS+ KA R
Sbjct: 81 EIPHDRLDFSYSRSSGPGGQNVNKLNTRVELRFHVEDADWIPEDMRHRFLEQQRHRVNKLGEFVLSSQEHRTQLKNREECVRKLEEALTRAAVVPKRRNMRTGLTEWEKENRLREKKKRSEKKASR 206
BLAST of mRNA_D-herbacea_F_contig112.989.1 vs. uniprot
Match: A0A1Z5KKA6_FISSO (Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKA6_FISSO) HSP 1 Score: 121 bits (303), Expect = 1.020e-27 Identity = 70/141 (49.65%), Postives = 93/141 (65.96%), Query Frame = 2
Query: 626 HDQLTLREQFSGEIPEDQLQMSFSRSSGSGGQNVNKLSTKVELRFVVADAEWLPHDVRLRMARHQRARINNRGELVITAQEFRTQKQNRTQALHKLREMINEAWEPAKERKMRTGISKAGKEIRKADKRHRSQVKAGRSKL 1048
HD + E +IPE+ L SF RSSG+GGQNVNK++++V++R V +A W+P++VR R+ + Q RI+ G L I AQE RTQ NR A+ KL+ M+ +AW KER+MR GIS KE RK KR RS VK GR K+
Sbjct: 87 HDNWKVPEYI--DIPEENLDFSFVRSSGAGGQNVNKVNSQVQVRLNVHEAYWIPYEVRQRLLQQQANRISKEGVLTIAAQEHRTQVANRKAAVQKLQNMLLQAWPRPKERRMRQGISIKTKEQRKEFKRRRSDVKEGRKKV 225
BLAST of mRNA_D-herbacea_F_contig112.989.1 vs. uniprot
Match: A0A4D9CYF1_9STRA (RF_PROK_I domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYF1_9STRA) HSP 1 Score: 121 bits (303), Expect = 5.260e-27 Identity = 66/126 (52.38%), Postives = 87/126 (69.05%), Query Frame = 2
Query: 662 EIPEDQLQMSFSRSSGSGGQNVNKLSTKVELRFVVADAEWLPHDVRLRMARHQRARINNRGELVITAQEFRTQKQNRTQALHKLREMINEAWEPAKERKMRTGISKAGKEIRKADKRHRSQVKAGR 1039
EIP D+L S+SRSSG GGQNVNKL+T+VELRF V DA+W+P D+R R QR R+N GE V+++QE RTQ +NR + + KL E + A K R MRTG+++ KE R +K+ RS+ KA R
Sbjct: 164 EIPHDRLDFSYSRSSGPGGQNVNKLNTRVELRFHVEDADWIPEDMRHRFLEQQRHRVNKLGEFVLSSQEHRTQLKNREECVRKLEEALARAAVVPKRRNMRTGLTEWEKENRLREKKKRSEKKASR 289
BLAST of mRNA_D-herbacea_F_contig112.989.1 vs. uniprot
Match: A0A7S1D533_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D533_CYCTE) HSP 1 Score: 120 bits (300), Expect = 6.760e-27 Identity = 69/126 (54.76%), Postives = 86/126 (68.25%), Query Frame = 2
Query: 662 EIPEDQLQMSFSRSSGSGGQNVNKLSTKVELRFVVADAEWLPHDVRLRMARHQRARINNRGELVITAQEFRTQKQNRTQALHKLREMINEAWEPAKERKMRTGISKAGKEIRKADKRHRSQVKAGR 1039
EIPED++ +SFSRS GSGGQNVNK++TKVELRF + DA+WLP +VR R+ RIN G I + E RTQ+QNR A KL+E++ A+ K RK+R GISK KE DK+ R QVKA R
Sbjct: 133 EIPEDRVDISFSRSGGSGGQNVNKVNTKVELRFKLDDADWLPDEVRDRIREQAPNRINKDGVFNIQSSENRTQQQNRRAAFTKLQEIVLRAYPRPKVRKLRKGISKKAKERNLEDKKRRGQVKANR 258
BLAST of mRNA_D-herbacea_F_contig112.989.1 vs. uniprot
Match: A0A8J5Y1J9_DIALT (RF_PROK_I domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5Y1J9_DIALT) HSP 1 Score: 114 bits (286), Expect = 3.850e-26 Identity = 62/128 (48.44%), Postives = 88/128 (68.75%), Query Frame = 2
Query: 665 IPEDQLQMSFSRSSGSGGQNVNKLSTKVELRFVVADAEWLPHDVRLRMARHQRARINNRGELVITAQEFRTQKQNRTQALHKLREMINEAWEPAKERKMRTGISKAGKEIRKADKRHRSQVKAGRSKL 1048
+P+ ++Q++ SRSSG GGQNVNK++TKVELRF V A+WLP DV+ R+ R+N GEL++TA E R+Q N AL K++E+++ A P KER+MR G+S K R DKR ++VK RS++
Sbjct: 33 VPKAKMQIAHSRSSGPGGQNVNKVNTKVELRFNVRAADWLPADVKARLIDDNSNRMNKEGELIVTASESRSQSANMDSALRKVQELVDVACIPPKEREMRVGLSAVTKRQRVEDKRRTAKVKQSRSRV 160
BLAST of mRNA_D-herbacea_F_contig112.989.1 vs. uniprot
Match: A0A8J9S3S9_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S3S9_PHATR) HSP 1 Score: 112 bits (281), Expect = 7.930e-26 Identity = 63/125 (50.40%), Postives = 82/125 (65.60%), Query Frame = 2
Query: 665 IPEDQLQMSFSRSSGSGGQNVNKLSTKVELRFVVADAEWLPHDVRLRMARHQRARINNRGELVITAQEFRTQKQNRTQALHKLREMINEAWEPAKERKMRTGISKAGKEIRKADKRHRSQVKAGR 1039
+PE QL+ SF RS G+GGQNVNK++T V+++ + W+P +VR R+ + QR R++ LV+ E RTQ NR A+ KLR MI +AWE KER +RTGIS KE RK KR RS VK GR
Sbjct: 3 VPESQLEFSFIRSGGAGGQNVNKVNTCVQIKLYLPGMTWVPTEVRQRLEQQQRHRVSKEQYLVMQVSEHRTQSANRKTAVDKLRNMIRQAWERPKERSIRTGISVKTKEQRKDFKRKRSLVKQGR 127
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 226.1 |
| Seed ortholog evalue | 2.6e-56 |
| Seed eggNOG ortholog | 2880.D8LC14 |
| KEGG rclass | RC01263 |
| KEGG ko | ko:K04121,ko:K15033 |
| KEGG Reaction | R05092 |
| KEGG Pathway | ko00904,ko01100,ko01110,map00904,map01100,map01110 |
| Hectar predicted targeting category | signal peptide |
| GOs | GO:0000313,GO:0000315,GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005761,GO:0005762,GO:0005840,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0015934,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0031974,GO:0032268,GO:0032543,GO:0032984,GO:0032991,GO:0034248,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0070013,GO:0070126,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0098798,GO:0140053,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112 |
| EggNOG free text desc. | translation release factor activity, codon nonspecific |
| EggNOG OGs | COG1186@1,KOG3429@2759 |
| Ec32 ortholog description | Peptide chain release factor class I/class II |
| Ec32 ortholog | Ec-20_004060.1 |
| EC | 3.1.1.29,4.2.3.19 |
| COG Functional cat. | J |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko03012 |
| Exons | 5 |
| Model size | 1728 |
| Cds size | 1056 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622927528.7512667-UTR-D-herbacea_F_contig112:887160..887819 | 1622927528.7512667-UTR-D-herbacea_F_contig112:887160..887819 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig112 887161..887819 - |
| 1690790217.3059306-UTR-D-herbacea_F_contig112:887160..887819 | 1690790217.3059306-UTR-D-herbacea_F_contig112:887160..887819 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig112 887161..887819 - |
| 1622927528.8403711-UTR-D-herbacea_F_contig112:897378..897391 | 1622927528.8403711-UTR-D-herbacea_F_contig112:897378..897391 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig112 897379..897391 - |
| 1690790217.37662-UTR-D-herbacea_F_contig112:897378..897391 | 1690790217.37662-UTR-D-herbacea_F_contig112:897378..897391 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig112 897379..897391 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622927528.767338-CDS-D-herbacea_F_contig112:887819..887864 | 1622927528.767338-CDS-D-herbacea_F_contig112:887819..887864 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig112 887820..887864 - |
| 1690790217.3238008-CDS-D-herbacea_F_contig112:887819..887864 | 1690790217.3238008-CDS-D-herbacea_F_contig112:887819..887864 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig112 887820..887864 - |
| 1622927528.78166-CDS-D-herbacea_F_contig112:890748..890899 | 1622927528.78166-CDS-D-herbacea_F_contig112:890748..890899 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig112 890749..890899 - |
| 1690790217.3336344-CDS-D-herbacea_F_contig112:890748..890899 | 1690790217.3336344-CDS-D-herbacea_F_contig112:890748..890899 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig112 890749..890899 - |
| 1622927528.799589-CDS-D-herbacea_F_contig112:893664..893838 | 1622927528.799589-CDS-D-herbacea_F_contig112:893664..893838 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig112 893665..893838 - |
| 1690790217.3447106-CDS-D-herbacea_F_contig112:893664..893838 | 1690790217.3447106-CDS-D-herbacea_F_contig112:893664..893838 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig112 893665..893838 - |
| 1622927528.8103302-CDS-D-herbacea_F_contig112:894278..894357 | 1622927528.8103302-CDS-D-herbacea_F_contig112:894278..894357 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig112 894279..894357 - |
| 1690790217.356703-CDS-D-herbacea_F_contig112:894278..894357 | 1690790217.356703-CDS-D-herbacea_F_contig112:894278..894357 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig112 894279..894357 - |
| 1622927528.8207464-CDS-D-herbacea_F_contig112:896771..897378 | 1622927528.8207464-CDS-D-herbacea_F_contig112:896771..897378 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig112 896772..897378 - |
| 1690790217.3669276-CDS-D-herbacea_F_contig112:896771..897378 | 1690790217.3669276-CDS-D-herbacea_F_contig112:896771..897378 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig112 896772..897378 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig112.989.1 >prot_D-herbacea_F_contig112.989.1 ID=prot_D-herbacea_F_contig112.989.1|Name=mRNA_D-herbacea_F_contig112.989.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=352bp
MLHIRSSSAIMTFMLAAGRSSGFSLVLNPFPASIVRNSPRHILGLVSQSV PPPLRSTSQHRQLVQPWASSALQTTSSHHASSCAYQRTLCAARDSSTFEI TPGISRSVRFGSQFTSLAAARSSAGHNNVSTSSTSSNSKSAGVGKVRRVV SDTAKIPLTGPRRTGATGRRPLGASNAWDGRAAANSADQREFRRVQGVGA SRGVHDQLTLREQFSGEIPEDQLQMSFSRSSGSGGQNVNKLSTKVELRFV VADAEWLPHDVRLRMARHQRARINNRGELVITAQEFRTQKQNRTQALHKL REMINEAWEPAKERKMRTGISKAGKEIRKADKRHRSQVKAGRSKLSSRDF D* back to topmRNA from alignment at D-herbacea_F_contig112:887161..897391- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-herbacea_F_contig112.989.1 ID=mRNA_D-herbacea_F_contig112.989.1|Name=mRNA_D-herbacea_F_contig112.989.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=10231bp|location=Sequence derived from alignment at D-herbacea_F_contig112:887161..897391- (Desmarestia herbacea DmunF female) CTTCAGCTCCCTTATGCTACACATACGTAGTAGCTCGGCCATAATGACCT
TCATGCTCGCAGCAGGCCGTAGCAGTGGCTTCTCGCTTGTCCTGAACCCC
TTCCCTGCCAGCATCGTGCGCAACAGTCCACGTCATATTCTTGGTCTCGT
TTCGCAATCAGTTCCGCCGCCTCTCCGTTCTACGAGCCAGCATCGCCAAC
TTGTGCAACCATGGGCATCAAGCGCGTTGCAAACTACGAGTAGCCACCAT
GCCAGCTCTTGCGCATATCAACGCACCCTATGCGCAGCAAGAGATTCTTC
TACTTTTGAAATAACACCAGGAATCTCGAGATCGGTACGATTTGGCTCCC
AGTTCACCTCTCTAGCTGCCGCGAGGAGCTCCGCAGGGCACAACAATGTC
AGCACCAGCAGCACCAGCAGCAACAGTAAATCGGCCGGCGTTGGTAAGGT
CCGACGAGTTGTAAGCGACACGGCTAAGATACCGCTGACAGGGCCTCGAA
GAACGGGGGCCACGGGCAGGAGGCCTTTAGGAGCAAGCAATGCATGGGAT
GGGAGAGCAGCTGCAAACAGTGCGGACCAACGGGAATTCCGGCGTGTTCA
GGGTGTTGGTGCTTCTCGAGGCAAGTCGAAAGAGCGAGTTGATGATATGT
ATCATACCATTACTCGTACTGAGTTTTTTTTTTTTGTCCCATTTATTATC
TTCGCCCGATTCTTTCTCTAGCTCCATCTCTCTTCGTAACTCAGATCCGG
GGTTACATAGCAGGCGCTCCTCCCTCCTTCCCACTACGGTACGTGCCTAC
ATTTTTATCGCGAGAAGAGTGCAGCACACTTTCTTCCCTCGTCGACTTCC
ATCGAATTGTGCTTACTCACGCTCTCGCGTTTTCTGCGACGGAAGATGGC
ACAGAAAAGTGCCACCGGGGATCGAACCCCCAACTTCCGCCAACAGAGGC
GAACACCCTGACCACTGAGTGTAGTATTTTATTTACTGCGAGTGCGGAGT
GCAGAGCCTACGAGTATGGTTCAGCGTTAATCATGTACCAGCTATACGAG
TGCCACATGGACTATCGTATCATACACACTACTGCCCCCCCCGTTTCCCA
TCCTACTACTTCGGGCATCCTCTGCCCTCTTCGCGTGACGTACACTACTC
TTCGCCGCTTCCTCTTCTTTGTGCCACGTCTCCATGAAGGTTTCTGCTCC
TTGTATGATCCCCCTGTACCACCTTCCCCACTAGACGACCGCTCTTGTCC
CCACCACAGTTTCAACTCCAAACACCAGTGACGGGTTCTCCGGTGACTCC
TCCGTGACGGCACCGAAACACCCTGCCTATACTAAAAGAGAGTCAAAACG
TGCCCCATCCTCCCCCTCAGAAAGGTTGCAGTCTACAGTAGTGCACAAGA
TGATAATGAGAATCAAATTACAAATTACAAATTACCCTTCTCGCCATTTT
CCTGTAGAGCCGGGACATCCCAGGGGAGTCACTGCGTTGCACCTTATCTG
AGGACCGATAGACTCCGCGCGACCGAAGTATCACACAGTGAGGTTGACGA
TTATCCCCTGGCCCCCGAACCACTTTGGAACGTCACGGCTGATTCTATTT
TTTTGTAGTACTAAATAATAAAGATCCGCCGTAGAATATAATACAAAAAC
GCTAAACCTATTGATAAGGTGTAGCTACTATCCTATTATACATAAGAGGG
AGCATTTTGGGCTCACCCAGTTGTTACTTAGTGTGATGGCCCGATTCCTT
GTCATACACTATTGATACTACTGTGCGTACTCAAAAGGAGGTCGTCTTAC
AATAGCTTAGGCAGGATATTTTTAGAATGTTCATTTGATTGTGCTGATGG
CACCAACGTCGGCTGTTCAGTAGTTCGGAAAAAATCTATTATAGAATTAA
GTATAACCCTAACGGCTAGACGATTATTACTTAAAGAGGGAGTACCATCA
ATTACTTATAACCCTAACAACATTTAAGAATTAACTCTATAACCCTAGCA
ATAGTACTTATTATTACTTAAAGAGGGAGTATCATCAATTACTTATAACC
CTAACAACGTTTTAGAATTAACTCTACAACCCTAACAATAGTACTTATTA
TTACTTAAAGAGGGAGTACCATCTATTACTTATAACCCTAACAACATTTA
AGAATTAACTCTATAACCCTAGCAATAGTACTTATTATTACTTAAAGAGG
GAGTACCATCAAGTACTTATAACCCCAACAACTTTTAAGAATTAACTTGT
TATTTCTTAAAGAGGGAGTACCATTAATAGTAAGCCCTGGCATGAGGCAA
AGATCCTCGTACAGTGTAGTACCTGACATTAAGCTGACTGTGATGTGCAA
TATAAGCAGTTGAAGAAGGAAAAGAAGACGCCACCGGCAAGCAGAAGAAT
TGATGTTTTATCCAACGTACGAGTTGATGATAGATATAGTTTCGGTACAG
TAGAGATTTTTTTTTAATATGTTAAAAATAGAAAAGAAAAAACAGGTAAA
AACAAATGAAGATCTAGATTTGTCCTGGCGATGAGAAAAAACTGACATGT
TCAACGGGTAAGCCGGGACTCGAACCCACGAGTTGGTATAGCTTTTGCTT
GATACAACGAAAAATCAGCGCAGGCTCGATCGATGTGCTCGTATTTATTC
TTGTTGTACGGTGATAGAGCGAGCGATGCTTTGTTTATTGTGCGGATCCC
CTAAGAACGCTACTCGTAGTTATCTCTCTGATGTAGTGGCTCGGATAATC
CGAAATGTGACTGGAAGATGCTTGTCTCCCTTACAAGATCCCGTCGAGAC
AGGCACTATGTTATAGAGCTCTACCACTGTTTTTTGCTGTTAAATGTTAC
ATACTACCACCCTCTGTTCAAGAAGTGCATCAGTATGTCGCAAAGCACTT
TCCTTTTTTTTTTTTGTTAACAGATCCGTTGGAATCTGTATAGTAGTAAT
AATAGTTCTGACCAATGCTGTCATATTTACCCGCGTGTTGGTTGTTTTTT
CTGTATATCTGCGGCCGTTTTCTGTGTCTTCCAGGGGTACACGACCAATT
GACGCTGCGTGAACAATTTTCAGGAGAGATCCCAGAAGATCAGTTGCAGA
TGTCCTTCTCGCGGTACGCTGTTGTTTTTCATGTGTTGCTTCGAACATGT
ATCACATGTTTTATTCTGAAGGCGTCGCCCTTTAGGGGTTGTAGCCCCCC
CCCCCCCCTCAGGGGTCAAGGAGTAAGCGTGCATTGCTGATGCCTTGCTA
TATTGTCGACATTACCTTCCGGTTAGTTATCGCTTGTTGTTGATCTCACA
TGTTGTTTGGTATAGTTATTGAGGTCGTCGTCCATACGGGTACTAAAAAC
TAATGAGGTTGATACATTACTGTTAAGCAAAACCTATAGATGCAATATAT
CTACCGCCTACAATAGTAAAGGCCGCTTCCGCGTGGTAGCACCTCGCCCG
GGAATAACAAACTTTTCATGTCTCTGATCTTGTGCGGCCATCCAAACACG
AGTATCGTATTATGTTTTCTTGCTTTTTTTTTTTTTTTTTTTCTTCGTTT
CAGATCCTCGGGATCGGGAGGACAGAACGTAAACAAACTTAGCACGAAGG
TCGAACTGCGATTTGTCGTGGCGGATGCCGAATGGCTTCCTCACGACGTA
CGCTTGAGAATGGCGAGACACCAGAGAGCGCGGATAAACAACAGGGGAGA
GCTCGTAATCACTGCTCAAGAGTTCAGGCAAGTGTGTGTGTGTGTGTGTG
TGCGTCCCGTGTTTTTCTCGGAGTACGTTGCGACATGCCTATCATTAATC
AAAATATATGACATTCATGTGTACGCATTAAGGGGGGTATGGATCGATGT
ACATGGGAGTGATGTTCCTCGGTACGTTGGAACGGCAACTGGTCGTACAC
TGGTACAATGGTGTGTGGGATAACCGAAGCGGGTGGTTGGAGCAACAAAG
GGGATCGGTTGGAGATGGACGTGCGATTATTTTCATGGCAGCGAGTTCCG
ACGCTCTCGTATAGCCTGGTAAGTGTTAGAAGATGCATATATAGGTATGT
TTGTTTGTTTTTGTTGTGACAACGCGATCGTCGAACTGCACCCCTATTCG
TAAGGCTGGTCTTAACATCTACCAGTATCCTCGTAGCTACCGAAGAGTCC
TTTGACGACAGTCGATATTGTTTGTCATACGCCGAAACCGAAAGGAAGAA
CTGGCTGGTCTAAACATGTGTCCACATGCGTTCGTTTCGCGTCTATGCGC
TATCGTAATTTATTTTTCGATAGTACCATAACGAAGAACGGCTTTTCTTG
ATGGTTGTTTGTCGGCATTTTAAAACGGAAAACCGGTGGACACAGTCCTC
CCATCATGCGTCAGTCACCGTCGACCCTGCTGCACTGTTGTCTCGATCAC
CGTTGAGGTTCCTGCGCCGTCGTGTCAAGCGTGCTGAGCTCGCGTTCACT
TTGTACCGTCGAAAAATGTGCGTCAGTACGAATATATAGCCGAGTTTTTT
TTCGTGTTTTACGACTGCTGTTTGTGTGGGTAATAGTTCCTGATCGAGAA
CGAGAACCGAACGTAGAAATCATAGAATATCGAGAACAAACAAGTGTGCT
GTGATCGGACTGCTCTTTGTGCGCTAAAAGCAGTATTTTATTATTTCCGT
GTAGCGGGTGTGCTGCGTGTAGAAAGTTTATGGTTGACGTGATACTTTTG
TTGCACATTATCAGCGAGAAGAAAAATATTGCATAAACTGGTTGAAAAGA
TGTCGGGGTAGTCTGCGCTCGCCTATCACGGTGGCCCCTAATCAATAGCC
CACAATAAGCCCCAACACCCACGTTGGCGCCTGCATCTTAAGAACTGCCA
CCGCGTTAATCCCGGATTCGGTTCGTTTAAACGACGCGGTTGATGACAGG
CTTTCCATCGATGCTATACTTGGAATATTCAGATAACAATTGGGGGAAGC
GTAAGGGTAGACCTTCTCCTGCCTTCACCCCTTTTGGGGCCTATTTATTA
GGGGCCACCGTGATAACTTGTTGTTGGGGGTTGCGTTTAGGAGCGCGTGT
ATTGGTGTGGGTCGTGGGACCTGAGGTTGGTTCAAAACAACAAAAGTGGA
TACAGTGAGAGAGGCGCCAAGTAAACAACGAGTGCATCTAAACGCTCCGT
TTGAGTGACTTAACTTATAATGGTAATATTAATAAGTACTAGAAAGTCGA
CGAGGGAAGAAAGTGCTGCACTCTTCTCGCGATAAAAATGTAGGCACGTA
CCGTAGTGGGAAGGAGGGAGGAGCGCCTACTATGTGACCCCGGATCTGAG
TTACGGAGAGAGATGGAGCTAGAGTAAGACTAGGGCGAAGATATTATTAA
ATGGGACGGAAAAAAAAAAAAAAAACTGCAACAGCAGTAGTACTACCATA
CTTGTATGATATTTACTGTTTCTACTACTTACTGCTACTATTGTTTTTGG
GTATGGTTGGGTTCGGTTGAGTTGGGTTTGGTTGGTCCATGTGGTCATCC
TTCGTGATTGGCTACTAGTTGTAATAGCTAAACGTAAGAGTGGTACTACG
ACTACTATTATATTACTGCTATTCTACCATTTGTATTACCGCGTTGTATG
CCATACATGGTCACTTGCTCGTAGCCTCGTAGTACTTACGGTAGTAGTTC
ATTCACGGTATTGCCTGCGGAATGCTGTTTGCCCTCCTTGCAGTCTCCCA
GTCGTCAGGTACATACAGGGAGCTAGACTGTAGAGTAGCAGTAATTGGAT
AGATGGGGCTGTGAGGTGCAAATGGAGAAACTCTCAGAAGCGGCAAATAT
GCCAGTCGAAACGCAATTTAGTAAATTATAAACCTTTCAGGAAATTCGTT
CCCTCCGCACCGTGCCTCGGCGAGGGCCTGCTGTGTCGTTTTGTATTGTC
GGTTCGTGCTCGAGCAAGGAAGAGGTTATCGCTTGCAAGACCCGCTAAAT
GTGAATCTATGATGATGCTGTTGGGCCACACGCGTGGTTTTTTTACTGTG
TTTTGTTGCTAGTGTGGTGATATCTGTGATTATGAGATTGTACGTGTAGC
ACCCCTGAGCCCGCGAGCGCAGGAGAGACCCGAACATGACAAAGCCGACC
ATAGCTAGCATTTTTGTTCCGTTGATAGCTCGCGCGAGGAGCGTTGCGCG
GCGCTGAAACCACCCACTCTTTGTGTTACCATGGTTGCGCGGAAGGGCGC
GGTGCCGGTTTCTGGTTATTCTGTGTTTGTTTTTGATGAGAAGTGGTGTG
ATTGAAGATAACGAAAAGGACGAAAATCACCCCTATTTTGATTTGTGTGT
TGCTGCGTGCCTAATTTTTTTTGTGAGCGTCGGTTCCTACATTTGGTTTT
CTTCTAAACATGTTTTGACTTTTGATAAACAGAAGTGCTCTATCGGAGGA
CGAACATGAGTCGATTATTGAACAAACGAAAAAGGATAAAGCTCACGGCA
TTCATGTAGATGTTTCCGTTTTTGTGACTTGCTGCTCTGCAGAACACAAA
AGCAAAATCGCACTCAGGCGCTGCACAAACTGCGCGAGATGATCAACGAG
GCGTGGGAGCCAGCAAAGGAGAGAAAAATGCGAACCGGCATAAGCAAGGC
GGGCAAAGAAATCCGGAAAGCGGACAAACGCCACCGCTCCCAGGTCAGCA
ACATGTCTCGACATCTCGATCCAGAGCTGTTGTCAGTTACGGTGCACCTA
CGAGTATATTTACCAGTATGACTATTGTGGCAAATTAATATGTTGCTCTG
TGTAGGTTTTACATCGCTGAAATGCACGCCTCGTGAGATGTTTTGTTTGG
GGGCTGACAATGAAAATGTTTGCGTTATTTCCATGTTACCCGCTAACATA
TGATAGTTGTTCACGGGTTATCCGCATCATCTCGGGTTTCTTAGTAGGTA
CTCGTAGGCCAAAGAGAGAGTGTTGTGTTGATGTTATTATTGCCCTGCTG
TAATGGAAGATTGCAGGGGGCCCCAAATGACATTCTCGTGCGCTAGTTCT
CAGAGGGGACGTTTTTTTAGTTAAGAACGCCACACTATAAGGTTTGTATG
TACCATTTGGGTAGGAAGTTCGCGGCTACTGCTGCTGCCGTTGCTGCTGG
GCAGGGCCACAGCTATTGAGCGGGTTCGCGGTAGTATGCAGTCACTTTTA
CAAGCGAGGAACGGAATTGTTGGTGTCATGTGATATGGGTGCGGATCACT
CTGTTGAACAAAAAACCCGGTAATAGTGTCATTGTTTGTATTATTACTTC
AGCAAATTGAACGAAGCAGAATCATCCGGCTCGAGCAGTTGGACCCGACG
AGGGCTAGTAGTTCAAAATATGTAAGCAACAACAAAATTCAACTGCTGTC
GAATCTTGCAAAGTGAAAACCACTATCGAATCTTACGGTAGACCTTGTGA
CAAGGATGTGATTGGGAACACCAGGTCCGATACATACGACGACAAGCAGT
AGTCACAGCAGTATAAGTGGGAAAACCCGACCCCTGGCAAAACTCGACTG
AATATAGTCGCAGACACCGGATACTACACGGCAACAAAATTGATATACTA
ACGCGAAGCTGAACACACATATCGTGTACTCAACGGAGTTGACACCACTC
TCTGCAATGGCGTAGTCCGTATTATGAATTGAACAACGTGTGGCACCGTC
TACGTTGTACTCATATCAATAAATGCCGGGAATTGACCACTCCAGGTTAG
CAAGCTCTATGTGGGGACGAGGAAGTAAAATCCTGTACCGCACATATTTG
AGACGAGTACAGCGGTGGAAATGGGAGACACGGTCCAGGAAAAATCCATC
GCGAAACGAAACCAAGCTCCCAAACCATGATGCAAGTTCTAGTTGGGGAA
GAGGGAGCAAGGTCCGGTACGCACATATTTGAGGCGAGAACAGCGGTGGA
AATGGGAGACTCGGTCCAGGAAAAATCCATCGCAAAACGAAACCAAGCTC
AAGACCATGATGCATTCCTCTACACAAGACCGCAACCCCACCATCGAACA
AACTAACCAAAAAGAAAAATGGAGCCAAGCCTAAAAACTATGATGCATTC
CCCTATTGCATTAGACTCCAACCCCGCCTTGAATATGGAATAGATCGGTG
GTATCATGGCCCTTGGAACAGCAGGCTTGTTCGAAGGCAAGGTGGTGGGT
GTTGTAGAGGTAGATGGTGGGTGCTACGCTCCTTTTCGGGCGGTGAGAGA
CCTGTGGACGAAGGTTGAAAGGTGTGGGAAGCAGGCGAGGAGGATATTAT
CCGGCAGTTGCGAAGCATAGTGGTGGCAGGTGGAGGAGGAGGAGTAATAG
TACCGGTGTGTTTGTAAATGCTCGAAGGAAAATGCCCAATAGCACCCAGT
AGCATAGTCTGCGGCAAAGTAGATGTACAGTTTCAACGTGCAATTTCTGC
TACAATTGCTGCACATAAATCGAAGCAGGGCACAAGTAGATACGTGTGAT
TTGCTGAACAACCGAAGAACTGAGCAGGGCAAAACAAGACAAGGTGGAAA
AAGGCCAAGCACACAACAAACGAAAAAAATGAGGGAAAAGCGAATGTAAA
CGTGACGGCGAGGGTAAGAACATGGAAATAGGAGATATGTACCAGGTGTA
TTTTTGATATAATTTACCCAGACAAAAACAAAACACACAGAGAGAGCACG
AAGACAGACCAGGAAAACCCCGACATGCGGTCGTGTTGTTGTGGGAATAC
GATAGTCCAAGAAAAAATGAAACAAGTTCAAAAGTAACGTCACCCGAACG
AAATACATACTTCAAATAATATACTTCAGTTTAACACGTCGTCGACGCAG
CAGAACCGAAAAAATGGCGCATTTTGGTAATATAGAGCTCTAGTCTATAG
CCAGACACAAAAAAGGGTGGCGGGTATTTTATCGAATTAAGCGGAAGACG
ACGATTCCCCGTCCGTCTCGGAGAGGTAGAGGCGGTTCTTGCCCTTTCTG
GAAGGGCTGTTCATCTTGTCCTGCATGCGGCTTCTTTTCCCGCACGTCGG
CCACGAAGAAGCGGTGGACCGCCTATTTGGACAATGGCGCGCTTCTTGAA
GAAGCACTCCATCTTCGCAGAAGATGAGGCTTGACCTGAGCACATGTCCC
TGAGGCTGTTCTCGCTCCCGCATTCGGTGCAATTGGTGTCGTCTCCGAGG
ACGTGGTCACCGATGCACTCGGCACCATCGGCGTGGACGAAGTCATACTG
GGACAGACCCGATGAGGTGGTCTTCCCCTATGCCCATCACTTGTTTTTTG
CTATTATACTTTACCTGTGTTCAGTTGTCTATTTTATTTTTATGTTAATT
GTAGATTTTTTCGAAAGACACATTAAGGGCACAGTAGTAGTCTACGTTAG
AAGAATCCTTTATTTTTTATTATACTTGGTGTATGACGTCACCAGAAGAC
GTTTCAGGTGTCCGTGCGCCTCATTACAATTTCGCATAGTCGGTTAATAT
ACGTTCTTGTCAATAACGACCGACCACCACCCCACCGCCGCTGCCGTCGA
TGCCTCCGTGTGTTTGGCAACCCGCAGGTCAAAGCCGGCCGCAGCAAGTT
GAGCTCGAGAGACTTCGATTAACTAGTTCGTCTAACGAGCGCGGCTTGGT
GATGCTGCCTCTGTTTGCGGAAGTTTCGCCGTTTGACTCAACGTGTCGCC
GTTTTGTCACAGTTGTGTCGATCGATGAAGACCCACCGCGTTACTTGTTT
TCGAGTCAACGAAGACAGAATGCGCACGCGATCAACTATTGCGGTAGCTG
TGATTTAGCGTGGATGAGTTTTTCCAGCGGCAGTGCTGGAGAGATGACTT
GTTTTTTTTTGTGCTGTTTTTTCAAGACACCAGAGTGCACGCTCTTTTAA
AATATGATAGAGTTTATGGCGTTGGTGACTTGAGTAGTGTAGGCGGGGGC
GTGTTGAGTACATTAAACCCGTATATTTTTGCTTTCGCGCAGTCGGCTGT
GACAGTGTTTCGTGTCGAAAGTGCGTTGGACTTGTCTGTGGGCAAATTGT
TGTGGGAGTAGTAAAATGTACACCTTCAAAAGTACGAATTTGCTGCGTGT
CGTTTGCTTCGTGCATCGACGATAAAAGACGTGCACAGCGGGCTATCATG
CGTTGTGATCATTCCTTGTCGGCGCTGCGGGCTGCCTGGACAACAGTTTC
AGCAAACAATTCAAGCCTGGGCATCTCTGTGGCGAGGCGGGGAAAATAAA
GCCTGTTCGCCCTGTCATGCCACATTCTTGC back to topCoding sequence (CDS) from alignment at D-herbacea_F_contig112:887161..897391- >mRNA_D-herbacea_F_contig112.989.1 ID=mRNA_D-herbacea_F_contig112.989.1|Name=mRNA_D-herbacea_F_contig112.989.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2112bp|location=Sequence derived from alignment at D-herbacea_F_contig112:887161..897391- (Desmarestia herbacea DmunF female) ATGCTACACATACGTAGTAGCTCGGCCATAATGACCTTCATGCTCGCAGC AGGCCGTAGCAGTGGCTTCTCGCTTGTCCTGAACCCCTTCCCTGCCAGCA TCGTGCGCAACAGTCCACGTCATATTCTTGGTCTCGTTTCGCAATCAGTT CCGCCGCCTCTCCGTTCTACGAGCCAGCATCGCCAACTTGTGCAACCATG GGCATCAAGCGCGTTGCAAACTACGAGTAGCCACCATGCCAGCTCTTGCG CATATCAACGCACCCTATGCGCAGCAAGAGATTCTTCTACTTTTGAAATA ACACCAGGAATCTCGAGATCGGTACGATTTGGCTCCCAGTTCACCTCTCT AGCTGCCGCGAGGAGCTCCGCAGGGCACAACAATGTCAGCACCAGCAGCA CCAGCAGCAACAGTAAATCGGCCGGCGTTGGTAAGGTCCGACGAGTTGTA AGCGACACGGCTAAGATACCGCTGACAGGGCCTCGAAGAACGGGGGCCAC GGGCAGGAGGCCTTTAGGAGCAAGCAATGCATGGGATGGGAGAGCAGCTG CAAACAGTGCGGACCAACGGGAATTCCGGCGTGTTCAGGGTGTTGGTGCT TCTCGAGATGCTACACATACGTAGTAGCTCGGCCATAATGACCTTCATGC TCGCAGCAGGCCGTAGCAGTGGCTTCTCGCTTGTCCTGAACCCCTTCCCT GCCAGCATCGTGCGCAACAGTCCACGTCATATTCTTGGTCTCGTTTCGCA ATCAGTTCCGCCGCCTCTCCGTTCTACGAGCCAGCATCGCCAACTTGTGC AACCATGGGCATCAAGCGCGTTGCAAACTACGAGTAGCCACCATGCCAGC TCTTGCGCATATCAACGCACCCTATGCGCAGCAAGAGATTCTTCTACTTT TGAAATAACACCAGGAATCTCGAGATCGGTACGATTTGGCTCCCAGTTCA CCTCTCTAGCTGCCGCGAGGAGCTCCGCAGGGCACAACAATGTCAGCACC AGCAGCACCAGCAGCAACAGTAAATCGGCCGGCGTTGGTAAGGTCCGACG AGTTGTAAGCGACACGGCTAAGATACCGCTGACAGGGCCTCGAAGAACGG GGGCCACGGGCAGGAGGCCTTTAGGAGCAAGCAATGCATGGGATGGGAGA GCAGCTGCAAACAGTGCGGACCAACGGGAATTCCGGCGTGTTCAGGGTGT TGGTGCTTCTCGAGGGGTACACGACCAATTGACGCTGCGTGAACAATTTT CAGGAGAGATCCCAGAAGATCAGTTGCAGATGTCCTTCTCGCGGGGTACA CGACCAATTGACGCTGCGTGAACAATTTTCAGGAGAGATCCCAGAAGATC AGTTGCAGATGTCCTTCTCGCGATCCTCGGGATCGGGAGGACAGAACGTA AACAAACTTAGCACGAAGGTCGAACTGCGATTTGTCGTGGCGGATGCCGA ATGGCTTCCTCACGACGTACGCTTGAGAATGGCGAGACACCAGAGAGCGC GGATAAACAACAGGGGAGAGCTCGTAATCACTGCTCAAGAGTTCAGATCC TCGGGATCGGGAGGACAGAACGTAAACAAACTTAGCACGAAGGTCGAACT GCGATTTGTCGTGGCGGATGCCGAATGGCTTCCTCACGACGTACGCTTGA GAATGGCGAGACACCAGAGAGCGCGGATAAACAACAGGGGAGAGCTCGTA ATCACTGCTCAAGAGTTCAGAACACAAAAGCAAAATCGCACTCAGGCGCT GCACAAACTGCGCGAGATGATCAACGAGGCGTGGGAGCCAGCAAAGGAGA GAAAAATGCGAACCGGCATAAGCAAGGCGGGCAAAGAAATCCGGAAAGCG GACAAACGCCACCGCTCCCAGAACACAAAAGCAAAATCGCACTCAGGCGC TGCACAAACTGCGCGAGATGATCAACGAGGCGTGGGAGCCAGCAAAGGAG AGAAAAATGCGAACCGGCATAAGCAAGGCGGGCAAAGAAATCCGGAAAGC GGACAAACGCCACCGCTCCCAGGTCAAAGCCGGCCGCAGCAAGTTGAGCT CGAGAGACTTCGATTAAGTCAAAGCCGGCCGCAGCAAGTTGAGCTCGAGA GACTTCGATTAA back to top
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