mRNA_D-herbacea_F_contig112.984.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig112.984.1
Unique NamemRNA_D-herbacea_F_contig112.984.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
BLAST of mRNA_D-herbacea_F_contig112.984.1 vs. uniprot
Match: D8LBZ8_ECTSI (Protochlorophyllide reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBZ8_ECTSI)

HSP 1 Score: 566 bits (1459), Expect = 1.000e-199
Identity = 298/396 (75.25%), Postives = 336/396 (84.85%), Query Frame = 3
Query:  111 IVRGVTSSALSVVGCLACIACGTVDAFVGPMSAARSSITRVNNKHVASAAYSRAPQGCFTSTSTVGLDNSRARLLRTAAGSSGVSMMAGNAKKTAIITGASSGIGLEAAKFLAASGDWHVIMAVRSFAKAEASAKELGMDESSYTVMDLDLASLNSVRNFVKALKAAKVKPDALVCNAAVWYPKDKEPRRTADGFEEAVGVNHLGHFLLCNLLLDELKQSRVVFIGTETHNPGSIAGKIPPQAHLGDLEGLAKNEPMVDGIKYEPTKAYKDSKVCNVLMMREMDKRFASNGMVVSALFPGCIAESPLFREKRGWFRTLFPVFQKYITKQFVSTEASAGRRVSEVVSSDKFTTSGAYWRWNGQDAEATARENVVSDEAMDDARCEKLWKISSDLVGI 1298
            +VRG T+SALS V C+AC+        VGP   AR S TRVN    A AA SRAP     + +        + +LR+++    ++M AG  KKT IITGASSGIGLE AKFLAASGDWHVI+AVRSFAKAEA AK+LGMD S+YTVM+LDLASLNSVRNFV  +KAAKVKPDALVCNAAVW+PKDK+PRRTADGFEEA+GVNHLGHFLL NLL+DELKQSRVVFIGTETHNPGSIAGKIPPQAHLGDL+GLAKNEPM+DG+KYEPTKAYKDSKVCNVLMMREM+KR++S GMVVSALFPGCIAESPLFREKRGWFR  FPVFQK++T+Q VS E  AGRR+++VVSSDK ++SG YWRWNGQDAEATARENVVSDEAMD+ARCEKLW+ISSDLVGI
Sbjct:    1 MVRG-TASALSAVACVACLLHNVAGFVVGPTPTARGSFTRVNRASSA-AAVSRAPGTLAPAAAARTQVGHASAVLRSSSAGREMTMAAGG-KKTCIITGASSGIGLEGAKFLAASGDWHVILAVRSFAKAEAGAKDLGMDPSTYTVMNLDLASLNSVRNFVAEIKAAKVKPDALVCNAAVWHPKDKKPRRTADGFEEAIGVNHLGHFLLVNLLMDELKQSRVVFIGTETHNPGSIAGKIPPQAHLGDLDGLAKNEPMIDGVKYEPTKAYKDSKVCNVLMMREMNKRYSSGGMVVSALFPGCIAESPLFREKRGWFRAGFPVFQKFVTRQLVSVE-EAGRRMADVVSSDKLSSSGTYWRWNGQDAEATARENVVSDEAMDEARCEKLWQISSDLVGI 392          
BLAST of mRNA_D-herbacea_F_contig112.984.1 vs. uniprot
Match: A0A7S1TKW4_9RHOD (Protochlorophyllide reductase n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKW4_9RHOD)

HSP 1 Score: 351 bits (901), Expect = 1.030e-114
Identity = 186/325 (57.23%), Postives = 236/325 (72.62%), Query Frame = 3
Query:  384 KKTAIITGASSGIGLEAAKFLAASGDWHVIMAVRSFAKAEASAKELGMDESSYTVMDLDLASLNSVRNFVKALKA----AKVKPDALVCNAAVWYPKDKEPRRTADGFEEAVGVNHLGHFLLCNLLLDELKQS-------RVVFIGTETHNPGSIAGKIPPQAHLGDLEGLAKN----EPMVDGIKYEPTKAYKDSKVCNVLMMREMDKRFASNGMVVSALFPGCIAESPLFREKRGWFRTLFPVFQKYITKQFVSTEASAGRRVSEVVSSDKFTTSGAYWRWNGQDA-----EATARENVVSDEAMDDARCEKLWKISSDLVGI 1298
            K   +ITG+SSG+GLEAAK LAA+GDW V+MAVRSFAKAE + +E  ++  +Y VM LDLASL SVR FV  LK+    A++  +ALVCNAAVWYPKDK+PR TADGFEE VG NHLGHFLL +LL+ +L +S       R+VFIGTETHNP SIAGK+PPQA LG L+GL K      PM+DG K+EPTKAYKDSKVCN + M++M  R++  G+VVSALFPGC+A S LFREKRGWF + FP FQK ITKQ+V+T+  AG R++ VV++  ++TSGAYW+WN         +       +S +A D+     L++ S++LVGI
Sbjct:   70 KDVVVITGSSSGLGLEAAKELAATGDWLVVMAVRSFAKAEKAMREANINPENYRVMSLDLASLTSVRQFVDELKSFLSRARLDLNALVCNAAVWYPKDKKPRFTADGFEEHVGTNHLGHFLLAHLLVSDLHKSAKTGLSPRLVFIGTETHNPDSIAGKVPPQADLGQLQGLLKGLGEEAPMIDGKKFEPTKAYKDSKVCNAITMKQMSDRYSPRGVVVSALFPGCVASSGLFREKRGWFNSFFPWFQKNITKQYVTTQ-EAGHRLASVVANPLYSTSGAYWKWNSLKLGVGKMDVVGTNIAISQQARDEKVAGVLYEKSAELVGI 393          
BLAST of mRNA_D-herbacea_F_contig112.984.1 vs. uniprot
Match: L1JNU2_GUITC (Protochlorophyllide reductase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JNU2_GUITC)

HSP 1 Score: 350 bits (899), Expect = 1.770e-111
Identity = 187/329 (56.84%), Postives = 239/329 (72.64%), Query Frame = 3
Query:  360 VSMMAGNAKKTAIITGASSGIGLEAAKFLAASGDWHVIMAVRSFAKAEASAKELGMDESSYTVMDLDLASLNSVRNFVKALKAAKVKPDALVCNAAVWYPKDKEPRRTADGFEEAVGVNHLGHFLLCNLLLDELKQS--RVVFIGTETHNPGSIAGKIPPQAHLGDLEGLAKN-EPMVDGIKYEPTKAYKDSKVCNVLMMREMDKRFA-SNGMVVSALFPGCIAESPLFREKRGWFRTLFPVFQKYITKQFVSTEASAGRRVSEVVSSDKFTTSGAYWRWNGQ----------DAEATARENVVS--DEAMDDARCEKLWKISSDLVGI 1298
            ++  + + +KT +ITGASSGIGL+ AK ++A   WHVIMAVRS++KA  +A+E+GM+  +YT+M+LDLASL+SVR+FV  L+      DA+VCNAAVWYP+D  PR T DGFEEAVG NHLGHFLLCNLLL +L +   RVVFIGTET N G +AG IPP A LG LEG+A   +  +DG K+EPTKAYKDSKVCN ++MREM+KR+  S G++V+A+FPGCIAESPLFR+KR WFR LFP FQK ITKQFV  E  AG+RV+ VV+ ++    G YW+WN Q          D +  A  N+V    EA+D+   E +W +SS LVG+
Sbjct:   86 INAQSSDGRKTVVITGASSGIGLQTAKAMSADKGWHVIMAVRSYSKAARAAEEIGMEPGTYTIMNLDLASLSSVRDFVNQLRLLGRPIDAIVCNAAVWYPRDTAPRLTVDGFEEAVGTNHLGHFLLCNLLLGDLPEGDGRVVFIGTETANDG-LAGLIPPVADLGKLEGMAAGMKSTIDGGKFEPTKAYKDSKVCNAIVMREMNKRYGKSRGLIVNAMFPGCIAESPLFRQKRAWFRWLFPKFQKAITKQFVPEEV-AGQRVANVVADEELGVGGTYWKWNAQAGKDFTRVAFDQQKQAAANLVKIPAEALDEMISEAVWDLSSALVGL 412          
BLAST of mRNA_D-herbacea_F_contig112.984.1 vs. uniprot
Match: S0F3U3_CHOCR (Protochlorophyllide reductase n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3U3_CHOCR)

HSP 1 Score: 340 bits (873), Expect = 4.710e-111
Identity = 182/313 (58.15%), Postives = 227/313 (72.52%), Query Frame = 3
Query:  387 KTAIITGASSGIGLEAAKFLAASGDWHVIMAVRSFAKAEASAKELGMDESSYTVMDLDLASLNSVRNFVKALKAAKVKP-DALVCNAAVWYPKDKEPRRTADGFEEAVGVNHLGHFLLCNLLLDELK--QSRVVFIGTETHNPGSIAGKIPPQAHLGDLEGLA---KNEP-MVDGIKYEPTKAYKDSKVCNVLMMREMDKRFASNGMVVSALFPGCIAESPLFREKRGWFRTLFPVFQKYITKQFVSTEASAGRRVSEVVSSDKFTTSGAYWRWNGQDAEATARENVVSDEAMDD--ARCEKLWKISSDLVGI 1298
            KTAI+TGASS IGL AAK LA  GD+HV+MAVR+  KAEA+AK +GM   SYTV+ LDLA L SVR FV A+  A V P  ALVCNAA W+P+DK+PR T DGF+E V VNHLGHFLL NLLL +LK  + R VF+ T+THNP ++ GK+PPQA LG+LEGL    K  P  +DG K+EPTKAYKDSKVCN+L M EM++R+ ++G+  SA+FPGCIA+S LFREKRGWFR LFP+FQ+YITKQ V  E  AGRRV+ V S  +F  SG YW+W G   +   +   V  +  +    + EKLW++S+ LV +
Sbjct:   67 KTAIVTGASSSIGLHAAKELAGRGDYHVVMAVRNPGKAEAAAKAVGMPADSYTVVPLDLARLQSVREFVTAVGVAGVPPVAALVCNAATWHPRDKKPRFTEDGFDETVQVNHLGHFLLANLLLPQLKLNRGRCVFLATQTHNPDTLPGKVPPQADLGELEGLVGGFKTLPGTIDGKKFEPTKAYKDSKVCNILTMTEMNRRYGTDGVTFSAVFPGCIAQSELFREKRGWFRALFPLFQRYITKQLVPVE-EAGRRVALVASDGRFGDSGRYWQWRGSYLQGMDKTTPVPIDPTEREAGKAEKLWELSAKLVNM 378          
BLAST of mRNA_D-herbacea_F_contig112.984.1 vs. uniprot
Match: A0A7S0Z1U2_9CRYP (Protochlorophyllide reductase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z1U2_9CRYP)

HSP 1 Score: 346 bits (888), Expect = 2.750e-110
Identity = 183/320 (57.19%), Postives = 235/320 (73.44%), Query Frame = 3
Query:  384 KKTAIITGASSGIGLEAAKFLAASGDWHVIMAVRSFAKAEASAKELGMDESSYTVMDLDLASLNSVRNFVKALKAAKVKPDALVCNAAVWYPKDKEPRRTADGFEEAVGVNHLGHFLLCNLLLDELKQS-RVVFIGTETHNPGSIAGKIPPQAHLGDLEGLAKN-EPMVDGIKYEPTKAYKDSKVCNVLMMREMDKRFA-SNGMVVSALFPGCIAESPLFREKRGWFRTLFPVFQKYITKQFVSTEASAGRRVSEVVSSDKFTTSGAYWRWN---GQDAE-------ATARENVVS--DEAMDDARCEKLWKISSDLVGI 1298
            ++T IITG+SSGIGL AA  LA+   WHVIMAVRS++KA+ +A++ G  E SYTVM +DLASL SVR+F  + KA  + PDALVCNAAVWYP+D EPR +ADG+EE+V  NHL HFLLC L+L  + +  +V+FIGTET N G IAGK+PP A LG LEG+ K     +DG +YEPTKAYK+SKVCN ++MREM+KR+A S G+ V+A+FPGCIAESPLFR+KR WFR LFP+FQKY+TKQFV  E  AGRR+++V+  ++    GAYW+WN   G DAE       +T   NVV    EA+D+   E++W +S  L G+
Sbjct:  101 RRTVIITGSSSGIGLAAATELASKRGWHVIMAVRSYSKAQLAAQKAGFPEDSYTVMPVDLASLKSVRDFAASFKATGLTPDALVCNAAVWYPQDLEPRLSADGYEESVATNHLAHFLLCQLMLPIIPRGGKVLFIGTETANDG-IAGKVPPVADLGTLEGMKKGMTTTIDGGEYEPTKAYKESKVCNAIVMREMNKRYAESRGITVNAMFPGCIAESPLFRQKRDWFRWLFPLFQKYVTKQFVE-EKEAGRRIADVIDKEELAVGGAYWKWNAKSGIDAEFKISDENSTPAANVVRIPSEALDEVTAEQVWDLSCGLTGV 418          
BLAST of mRNA_D-herbacea_F_contig112.984.1 vs. uniprot
Match: A0A6T8NUL2_HEMAN (Protochlorophyllide reductase n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8NUL2_HEMAN)

HSP 1 Score: 345 bits (886), Expect = 4.270e-110
Identity = 184/320 (57.50%), Postives = 235/320 (73.44%), Query Frame = 3
Query:  384 KKTAIITGASSGIGLEAAKFLAASGDWHVIMAVRSFAKAEASAKELGMDESSYTVMDLDLASLNSVRNFVKALKAAKVKPDALVCNAAVWYPKDKEPRRTADGFEEAVGVNHLGHFLLCNLLLDEL-KQSRVVFIGTETHNPGSIAGKIPPQAHLGDLEGLAKNEPM-VDGIKYEPTKAYKDSKVCNVLMMREMDKRFA-SNGMVVSALFPGCIAESPLFREKRGWFRTLFPVFQKYITKQFVSTEASAGRRVSEVVSSDKFTTSGAYWRWN---GQDAE-------ATARENVVS--DEAMDDARCEKLWKISSDLVGI 1298
            ++T IITG+SSGIGL AA  LA    WHVIMAVRS++KA+ +A++ G+ E SYTVM +DLASL SVR+F  + KA  + PDALVCNAAVWYP D EPR +ADG+EE V  NHL HFLLC L+L  + K  RV+FIGTET N G IAGK+PP A LG+LEG+ +     +DG +YEPTK+YK+SKVCN ++MREM+KR+A S G+ V+A+FPGCIAESPLFR+KRGWFR LFP+FQKY+TKQFV  E  AGRR+++ +  D+    GAYW+WN   G DAE       +T   NVV    EA+D+   E++W +S+ L G+
Sbjct:   92 RRTVIITGSSSGIGLAAATELACKRGWHVIMAVRSYSKAKLAAQKAGIPEDSYTVMSVDLASLQSVRDFAASFKATGLVPDALVCNAAVWYPLDIEPRLSADGYEENVATNHLAHFLLCQLMLPIIPKGGRVLFIGTETANDG-IAGKVPPVADLGNLEGMKQGMSYTIDGGEYEPTKSYKESKVCNAIVMREMNKRYAESRGITVNAMFPGCIAESPLFRQKRGWFRWLFPLFQKYVTKQFVE-EKEAGRRIADTIDLDELAVGGAYWKWNAKSGIDAEFVISDENSTPAANVVRIPGEALDEVTAEQVWDLSAGLTGV 409          
BLAST of mRNA_D-herbacea_F_contig112.984.1 vs. uniprot
Match: A0A5J4YUK9_PORPP (Protochlorophyllide reductase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUK9_PORPP)

HSP 1 Score: 339 bits (870), Expect = 4.400e-110
Identity = 179/327 (54.74%), Postives = 235/327 (71.87%), Query Frame = 3
Query:  378 NAKKTAIITGASSGIGLEAAKFLAASGDWHVIMAVRSFAKAEASAKELGMDESSYTVMDLDLASLNSVRNFVKALKA--AKVKPD--ALVCNAAVWYPKDKEPRRTADGFEEAVGVNHLGHFLLCNLLLDELKQS-------RVVFIGTETHNPGSIAGKIPPQAHLGDLEGLAKN----EPMVDGIKYEPTKAYKDSKVCNVLMMREMDKRFASNGMVVSALFPGCIAESPLFREKRGWFRTLFPVFQKYITKQFVSTEASAGRRVSEVVSSDKFTTSGAYWRWN----GQDAEATARENV-VSDEAMDDARCEKLWKISSDLVGI 1298
            N K   +ITGASSG+G+ AAK LA++GDW V++AVRSF+KAE + +E  ++  +Y ++ LDLASL SVR F ++LK   AK K D  A+VCNAA W+PKDK+PR TADGFEE VG NHLGHFLL +LL D+L++S       R+VF+GTETHNP SIAGK+PPQA LG L GL K       M+DG K+EPTKAYKDSKVCN + M++M  R+   G+VVSA+FPGC+A S LFREKRGWF + FP FQK ITKQ+VS E  AG R++ VV++  ++T+GAYW+WN    G         N+ +S +A D+    +L+++S ++VGI
Sbjct:   65 NQKDVVVITGASSGLGMAAAKELASTGDWLVVLAVRSFSKAEKALREANLNPKNYRILPLDLASLTSVRQFSESLKTMLAKEKLDLNAIVCNAATWHPKDKKPRYTADGFEEHVGTNHLGHFLLAHLLADDLRKSARTGLAPRLVFLGTETHNPDSIAGKVPPQADLGRLAGLEKGLCGENAMIDGKKFEPTKAYKDSKVCNAITMKQMSDRYGPRGVVVSAMFPGCVASSGLFREKRGWFNSFFPWFQKNITKQYVSVE-EAGHRLAAVVANPLYSTTGAYWKWNSLKLGDGTMDPVGTNIAISQQARDEELANRLYELSCEMVGI 390          
BLAST of mRNA_D-herbacea_F_contig112.984.1 vs. uniprot
Match: A0A1X6NIP3_PORUM (Protochlorophyllide reductase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NIP3_PORUM)

HSP 1 Score: 333 bits (854), Expect = 4.610e-109
Identity = 178/321 (55.45%), Postives = 229/321 (71.34%), Query Frame = 3
Query:  369 MAGNAKKTAIITGASSGIGLEAAKFLAASGDWHVIMAVRSFAKAEASAKELGMDESSYTVMDLDLASLNSVRNFVKALKAAKVKP-DALVCNAAVWYPKDKEPRRTADGFEEAVGVNHLGHFLLCNLLLDELKQS--RVVFIGTETHNPGSIAGKIPPQAHLGDLEGL-----AKNEPMVDGIKYEPTKAYKDSKVCNVLMMREMDKRFASNGMVVSALFPGCIAESPLFREKRGWFRTLFPVFQKYITKQFVSTEASAGRRVSEVVSSDKFTTSGAYWRWNG---QDAEATARENVVSDEAMDDARCEKLWKISSDLVGI 1298
            MA +   T+IITGASS +G+ AAK L A GD HV+MAVR  AKA   A E G  E +YT++ +DLASL+SVR+FV A +A   +   +LVCNAAVWYP+DKEPR T DGF+E + VNHLGHFLL NLL+ +LK++  RVVF+ T THNP +IAGK+PPQA+LGDL GL       +   VDG K+EPTKAYKDSKVCNVL M  + +R A +G++VSA++PGCIA+S LFR+KRGWFR  FP+FQKY+TKQ+VS E  AGRRV++V     F   G YW W G   + A+ T    V S E  + A+ ++LW++S+  VG+
Sbjct:    1 MAASQPYTSIITGASSSVGMFAAKALVARGDTHVVMAVRDTAKAAKVAAEFGFAEGTYTILPVDLASLDSVRSFVSAYQAGGFRGLSSLVCNAAVWYPRDKEPRLTGDGFDETLQVNHLGHFLLVNLLMGDLKRACGRVVFLATPTHNPDTIAGKVPPQANLGDLAGLEAAVAGTSSGTVDGGKFEPTKAYKDSKVCNVLTMTALHERAAKDGVIVSAVYPGCIADSELFRQKRGWFRWFFPLFQKYVTKQYVSEE-EAGRRVADVAGGAAFGDGGGYWMWKGSYLEGADKTTPTRVPSTE-REGAKADRLWELSAKAVGL 319          
BLAST of mRNA_D-herbacea_F_contig112.984.1 vs. uniprot
Match: A0A7S2ZBT5_9RHOD (Protochlorophyllide reductase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZBT5_9RHOD)

HSP 1 Score: 335 bits (859), Expect = 5.530e-109
Identity = 173/319 (54.23%), Postives = 224/319 (70.22%), Query Frame = 3
Query:  387 KTAIITGASSGIGLEAAKFLAASGDWHVIMAVRSFAKAEASAKELGMDESSYTVMDLDLASLNSVRNFVKALKAAKVKPDALVCNAAVWYPKDKEPRRTADGFEEAVGVNHLGHFLLCNLLLDEL----------KQSRVVFIGTETHNPGSIAGKIPPQAHLGDLEGLAKN--EP--MVDGIKYEPTKAYKDSKVCNVLMMREMDKRFA-SNGMVVSALFPGCIAESPLFREKRGWFRTLFPVFQKYITKQFVSTEASAGRRVSEVVSSDKFTTSGAYWRWNGQDAEATARENVVSDEAMDDARCEKLWKISSDLVGI 1298
            KT +ITGASSGIG  AAK L+ SG+W+VIMAVR+  KA   A+E  +D+ SY +MDL+L SL SVR FVK LK  +V  D LVCNAA+W+PKD +PR T DG+EEAV VN+ GHFLL NL++              QSRVVFIGTETHNP ++ GKIPPQA LGD++GL     EP  M+ G K+EPTKAYKDSKVC  ++M+E+D+R+   N +  + LFPGC+A+S LFREKR WFR++FP FQ Y+T+Q+VS E  AG R ++V S  +F   GAYWRW G   E+   E  VS EA+D  + ++LW +++ L G+
Sbjct:   59 KTVVITGASSGIGKHAAKELSRSGEWNVIMAVRNPEKAAKVAEEYDLDKGSYKIMDLELGSLESVRKFVKTLKDDRVTVDTLVCNAAIWHPKDTKPRYTEDGYEEAVAVNYFGHFLLVNLMIQNSTIRPNLQRGQNQSRVVFIGTETHNPDTLPGKIPPQADLGDMQGLEAGFKEPIGMISGGKFEPTKAYKDSKVCISILMKELDRRYGRQNNITFTTLFPGCVAKSGLFREKRAWFRSIFPTFQAYVTQQYVSEEL-AGLRAAQVASESRFARGGAYWRWQGTAPESPVFEKDVSYEALDTEKAKRLWDLTAKLTGV 376          
BLAST of mRNA_D-herbacea_F_contig112.984.1 vs. uniprot
Match: A0A383V7Z2_TETOB (NADPH-protochlorophyllide oxidoreductase n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383V7Z2_TETOB)

HSP 1 Score: 332 bits (852), Expect = 9.570e-108
Identity = 172/312 (55.13%), Postives = 221/312 (70.83%), Query Frame = 3
Query:  378 NAKKTAIITGASSGIGLEAAKFLAASGDWHVIMAVRSFAKAEASAKELGMDESSYTVMDLDLASLNSVRNFVKALKAAKVKPDALVCNAAVWYPKDKEPRRTADGFEEAVGVNHLGHFLLCNLLLDELKQS-----RVVFIGTETHNPGSIAGKIPPQAHLGDLEGLAKNEPMVDGIKYEPTKAYKDSKVCNVLMMREMDKRFASNGMVVSALFPGCIAESPLFREKRGWFRTLFPVFQKYITKQFVSTEASAGRRVSEVVSSDKFTTSGAYWRWNGQDAEATARENVVSDEAMDDARCEKLWKISSDLVGI 1298
            N K T +ITGASSG+GL AA  LA +GDWHVIMA R F+KAE +AK++GM   SYTVM LDLASLNSVRNFV+  +A+  + DALVCNAAV+ P  KEP  TADGFE +VG NHLGHFLL N+++++L  S     R+V +G+ T N  ++AG +PP+A LGDL GL     M+DG +++  KAYKDSKVCN+L MREM+KRF    ++ S+L+PGCIAE+ LFR     F++LFPVFQKY+TK +VS E  AG+R+++VVS      SG YW WN         EN VS+E  DD +  KLW++S  LVG+
Sbjct:   81 NLKPTVVITGASSGLGLNAAAALAKAGDWHVIMACRDFSKAEMAAKKMGMPAGSYTVMHLDLASLNSVRNFVENFRASGSRIDALVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLANMMMEDLNNSPSEHPRMVIVGSITGNTNTLAGNVPPKADLGDLSGLLSGSSMIDGKEFDGAKAYKDSKVCNMLTMREMNKRFGGGKVLFSSLYPGCIAETGLFRNHVPLFKSLFPVFQKYVTKGYVSEE-EAGKRLAQVVSDPNMGKSGVYWSWNNATG---VFENQVSEEVSDDGKAAKLWEVSEKLVGL 388          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig112.984.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBZ8_ECTSI1.000e-19975.25Protochlorophyllide reductase n=2 Tax=Ectocarpus T... [more]
A0A7S1TKW4_9RHOD1.030e-11457.23Protochlorophyllide reductase n=1 Tax=Erythrolobus... [more]
L1JNU2_GUITC1.770e-11156.84Protochlorophyllide reductase n=1 Tax=Guillardia t... [more]
S0F3U3_CHOCR4.710e-11158.15Protochlorophyllide reductase n=1 Tax=Chondrus cri... [more]
A0A7S0Z1U2_9CRYP2.750e-11057.19Protochlorophyllide reductase n=1 Tax=Hemiselmis t... [more]
A0A6T8NUL2_HEMAN4.270e-11057.50Protochlorophyllide reductase n=1 Tax=Hemiselmis a... [more]
A0A5J4YUK9_PORPP4.400e-11054.74Protochlorophyllide reductase n=1 Tax=Porphyridium... [more]
A0A1X6NIP3_PORUM4.610e-10955.45Protochlorophyllide reductase n=1 Tax=Porphyra umb... [more]
A0A7S2ZBT5_9RHOD5.530e-10954.23Protochlorophyllide reductase n=1 Tax=Rhodosorus m... [more]
A0A383V7Z2_TETOB9.570e-10855.13NADPH-protochlorophyllide oxidoreductase n=2 Tax=S... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig112contigD-herbacea_F_contig112:787887..795715 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score572.0
Seed ortholog evalue2.2e-160
Seed eggNOG ortholog2880.D8LBZ8
KEGG rclassRC01008
KEGG koko:K00218
KEGG ReactionR03845,R06286
KEGG Pathwayko00860,ko01100,ko01110,map00860,map01100,map01110
Hectar predicted targeting categorychloroplast
EggNOG free text desc.oxidation-reduction process
EggNOG OGsCOG1028@1,KOG1208@2759
EC1.3.1.33
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons6
Model size1301
Cds size1197
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927527.7486677-CDS-D-herbacea_F_contig112:787886..7880691622927527.7486677-CDS-D-herbacea_F_contig112:787886..788069Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig112 787887..788069 -
1690790216.774631-CDS-D-herbacea_F_contig112:787886..7880691690790216.774631-CDS-D-herbacea_F_contig112:787886..788069Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig112 787887..788069 -
1622927527.7667685-CDS-D-herbacea_F_contig112:788786..7889931622927527.7667685-CDS-D-herbacea_F_contig112:788786..788993Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig112 788787..788993 -
1690790216.7879052-CDS-D-herbacea_F_contig112:788786..7889931690790216.7879052-CDS-D-herbacea_F_contig112:788786..788993Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig112 788787..788993 -
1622927527.7853694-CDS-D-herbacea_F_contig112:789735..7898101622927527.7853694-CDS-D-herbacea_F_contig112:789735..789810Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig112 789736..789810 -
1690790216.7979367-CDS-D-herbacea_F_contig112:789735..7898101690790216.7979367-CDS-D-herbacea_F_contig112:789735..789810Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig112 789736..789810 -
1622927527.803367-CDS-D-herbacea_F_contig112:790918..7910921622927527.803367-CDS-D-herbacea_F_contig112:790918..791092Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig112 790919..791092 -
1690790216.8055432-CDS-D-herbacea_F_contig112:790918..7910921690790216.8055432-CDS-D-herbacea_F_contig112:790918..791092Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig112 790919..791092 -
1622927527.8143764-CDS-D-herbacea_F_contig112:791972..7922171622927527.8143764-CDS-D-herbacea_F_contig112:791972..792217Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig112 791973..792217 -
1690790216.8125172-CDS-D-herbacea_F_contig112:791972..7922171690790216.8125172-CDS-D-herbacea_F_contig112:791972..792217Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig112 791973..792217 -
1622927527.8307252-CDS-D-herbacea_F_contig112:795298..7956111622927527.8307252-CDS-D-herbacea_F_contig112:795298..795611Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig112 795299..795611 -
1690790216.8199959-CDS-D-herbacea_F_contig112:795298..7956111690790216.8199959-CDS-D-herbacea_F_contig112:795298..795611Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig112 795299..795611 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927527.8436382-UTR-D-herbacea_F_contig112:795611..7957151622927527.8436382-UTR-D-herbacea_F_contig112:795611..795715Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig112 795612..795715 -
1690790216.8274488-UTR-D-herbacea_F_contig112:795611..7957151690790216.8274488-UTR-D-herbacea_F_contig112:795611..795715Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig112 795612..795715 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig112.984.1prot_D-herbacea_F_contig112.984.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig112 787887..795611 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig112.984.1

>prot_D-herbacea_F_contig112.984.1 ID=prot_D-herbacea_F_contig112.984.1|Name=mRNA_D-herbacea_F_contig112.984.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=399bp
MTIVRGVTSSALSVVGCLACIACGTVDAFVGPMSAARSSITRVNNKHVAS
AAYSRAPQGCFTSTSTVGLDNSRARLLRTAAGSSGVSMMAGNAKKTAIIT
GASSGIGLEAAKFLAASGDWHVIMAVRSFAKAEASAKELGMDESSYTVMD
LDLASLNSVRNFVKALKAAKVKPDALVCNAAVWYPKDKEPRRTADGFEEA
VGVNHLGHFLLCNLLLDELKQSRVVFIGTETHNPGSIAGKIPPQAHLGDL
EGLAKNEPMVDGIKYEPTKAYKDSKVCNVLMMREMDKRFASNGMVVSALF
PGCIAESPLFREKRGWFRTLFPVFQKYITKQFVSTEASAGRRVSEVVSSD
KFTTSGAYWRWNGQDAEATARENVVSDEAMDDARCEKLWKISSDLVGI*
back to top

mRNA from alignment at D-herbacea_F_contig112:787887..795715-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig112.984.1 ID=mRNA_D-herbacea_F_contig112.984.1|Name=mRNA_D-herbacea_F_contig112.984.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=7829bp|location=Sequence derived from alignment at D-herbacea_F_contig112:787887..795715- (Desmarestia herbacea DmunF female)
GCGAAAACTATCGTCTTTTTTAGGCTCTGTCTGCTTGTTTTGACAAGCTC TCGAGGGTCGCGGATTGAGTGTTTTCAACAAGAAGCTGAAAGTTTCCCAT CATCATGACTATCGTGCGAGGAGTGACCAGCAGCGCGCTGAGCGTCGTGG GCTGTCTAGCATGCATCGCTTGCGGTACCGTGGACGCTTTCGTCGGGCCC ATGTCCGCCGCTCGTAGCTCTATTACGCGTGTCAACAACAAGCACGTTGC CTCTGCGGCGTATTCAAGGGCTCCTCAGGGTTGCTTTACGAGCACCAGCA CTGTGGGGCTAGACAACAGCCGCGCACGCCTGTTGCGGACGGCAGCTGGC TCGAGTGGGGTGTCGATGATGGCGGGAAACGCGAAGAAGACAGCCATCAT TACGGGTGCTTCTTCCGGTGAGCCTAGCTTGCAGCAAATATATGATATTT GGCTGTTCGGAGGTCGGTACAGACAGTAGTAGTGCTACTACTACTGTACC GTTGTTGTACGTCTGTGACCGAGTGCCGTCATTATCCATCTATCTCTAAC GGGCCGAGCGGGCGGTAGTGTTAGTCGTGGGTGCGTGTATCCTTTGTTGT GGTTGATGTATGCCCTCTGGCCTCTGATGTGATACATAATAGAACGCAAT ACAACAATACAACAATGCAACAGCAAGGAGGGCAATAGTCAAAAGAGCGG CTCGATTCGATTCTTGTCTTGTTTCCTGTTTTCCAGGCGGCGTGATCATG ATCATGTAATCATGATACTTGGCATGGTATCATGCTATTAATATCATGAT GACGATGCAGCTGTCGACTGTTATCATAGCAGTACAGCAATACGAGAACC AATTGCATTGTATTGTGTTTGATAGTTGACATTTGACGTCTTGTGTGTGT GGTTTCCGACGGATGCTTGACGAGCTGAAAACTCTCACGTGTCAAGTTAT TTCGCTCCGAGTCACTGCCACGACTAAGGTACGGTAACCTGAGCCTCTCA GCTTTAATACACTTCGTTTCTATACTCGTGTTATACTATTGATATCGTAC TCGTAGCATATCTCTGTGTGGATGCTACAGTATCATATTGTTAAACAATC TACCGTCGTATGGGGTCCCTCTACGAGTATGATAGTTCCATTGATAGATA CTCGTACTATTAATACTACCGTACTAGATACCACTGGCTTGCGGTATAAT AGGCTTGTGGTACATCTTTGACGTGCTGGGTGGTAGGTGTACTTGTACAT GTAACGCGTAGGCCAACCCATGTTGATGGCTCAAGCCATCGAGCGATACC GTAGGGCCTGTGTAAAGGGGAAAAAGCAGATATTATATGATGAATGCTGT TGAAAGTTGAACGATGTCGATGTGCCGACTGCTACTTGCTACGTACGGTG TTCGGAATCGAGTGGCTCCAGCAGTATCGTGGTTGTCTGTTTCATACCTT GTACGAGGTACGGCAGTATCAATGAAGGTAAGTTTAGTAATATGCTGGCA CAAGGTATAAGATTATTACAGAGTACGTAGCAGAGTAGTGGAAGCTCCAA CTTGAAACGTTTTGTTTTACGTACTGTAGGTTTATGAGGTACTATTACTG TTGTATGGTATTAGTCTAAATCAGGTATTGATGCGTGGTATCATACTGGT ACATTTGGGACTAATCGTCGGTGGTGGTTGTAGTTGGTGCCCCTATACGA GTTGTACGTAGTAAGCGACGACTCCCTTTGTTGCAACTTTGCATAGGAGT AAATGCTGATTTTGGAGGTCCTCTACGACGTGGTGTCACCGGGTAGCAGC ACAGTTAAGCTTGAAGATGGCTTGCGGCTTTCTGTCGGTAGTGTTGCGCG TTGGGATGGCCAAACCGGGTGGGTTGTAAAGTGGAACGTGACTTAGACAA GTACAAGTGTGACGCTTGACGTCGTTGCGTGGAATGTGGTGGCGAAGACG CAAGGCTGGACCCGATGTAATGTATAAACACTACTCTGTCTTGTTACCCT TGGTACGATACACTACAAAGTAAACATGCGAGATGTGAATATGGTCGAAA CCCATTGCCAAAAGCGAACGCGGCCTTTTTTCAAGATTGAATTGATGATT GATGATTGCATGATTGATGTTGTTGTTGTCTTCACATTAAAAAGTCGTCC ATTCCACTCTACGACATCCACTAGCGTACTCAGAGTCTGTACTGGATCTT CCACCCTAGAAAGACACGATGTAAACGCGCGAAAATAGCAAAGAACGCTC TAGCCAGAGACAGGAATGCTCTGTACGTTACGAGGCCGCGGTCCAAGGTA TCGAGTCTTAGTATGATACGAAGTATGTACAAGTATATACGCTGCATCGA TAACACTCTTAATAGCACAACAAGCGCCCCCAAAGAATTGGCAGCTCGCA GCATGGTCTGATTCGTGACACCCTGTATGTTGTTCGCTTAGGCTATATTT CGGCGTGAGACCTGTTTGCCGGTACCTCGAGGATGCTGCGGTCATCGCAT TGTTACCGTGTACGAGATATAGACTAGTTTTGATAAAGAACGGGTTGTAC GGCCTCAGCTATCATTTGTCGGTGTGTTTTAGCCCTCGAATGTTGAAACA TCCAGAGGGTGGTATACAAGTTGTAGGATACAGCGGTATGAAGGCTCCCC AGGCTCCCCGGATCGATGCGTGTTGGCCGAAACATTTACCTTTTCAATGG GCGATAGCGTGGATAGTTGGTGATACAATAGGTGTGATGAGTGTGATGAT GTGATGATGTGATGGTGAAATGATGTGATGATGAAATGGTGTGATGTTGT GATGATGGTGACGTTCAGGAGGGAGGGTGGGGGTTTTGCTGTTGACGAAC AGGTGATGCCAACAACCTACTGGGTCAAAATACCAAAATACCTCCAAAGT ATGTTATCGTCAGAGTTTGTCGCCGTTTGTGCTGCCGATACATGTTGTGC CTCTTATCATACATTTACGTTGTCGGTGCATCCCACGGCGGCAGACTACG GTTAGGGTGAACCCATAACACGGCGACGGAATACAACGACAGTAGTAGTG TCGCAGTACAACTGGCACCGAGCAGTTTAAGCGTGGCCATCATAAGAGCA CAACTCCGTGCCGTCAGCCGTCACATGCTTGCATGGTAGTATCTTAGCCA AGCAACTATATCTATATCCGGCGTGCATCCTACTTGCGCATCCATGTTGT CGACAATCACGTGATGGAATGTTCGTCGGTTGTCCATTAGAGCACTGTCA ACCAACGTTCCACCAAATACCATGACAATGCATTTTTCATTTTTCTGCCG CGTAATGACACGGGTTAATGGAATTGTACACTGCGGAGAATAGTTTGTAG CTTGAGGCTGCTGCCATGTTAGCTGTACCGGTATTTTCACTGTCTTAATG CCTATCCTATCCTACCACTGCTCCGTTTTAGCCCACGGAAATTGTAATTA CTTTTGGTGCTAACATACGCTAATATGGCCGTTGATCGATTCCGGCAGGC ATCGGACTCGAGGCCGCTAAATTCTTGGCTGCGTCGGGCGACTGGCACGT GATCATGGCCGTGCGGTCGTTCGCCAAGGCCGAGGCGTCGGCGAAGGAAT TGGGGATGGACGAGTCTAGCTACACGGTGATGGACCTCGACCTGGCCTCT CTCAACAGCGTGCGGAATTTCGTTAAGGCGTTGAAGGCCGCCAAGGTTAA GCCGGACGCGCTCGTCTGCAACGCCGCCGTTTGGTACCCCAAGGTGTGTT TTCCTATTTTGTATGTGTGTTGATTGATAGCTGTAGTATGCGAAATGGTT CGTGCCTTTGGCGCGTGTAGAAAGCAGGCCGTGGATACGAAGCCGCCGAT GAAGCTATGGCCTGTGCGTGGTGTGCATGCGGTCGCTGTTTTTATGTTTT TGTATTGTTGCGGTTTCAAGAGTGCGGGAGGGTTTGCTGTCAAGACGGGG GTGGTGTGGATCTGTGGAAAGCGTTCTGCCGTCCCATGTGATAGGCATCA CCGGTCCACGTCCAAAATAGGGCAGATCGCTCGCGGTGGAGGTATCTTTG TCGGGACGTGTTTGCGACCCACCCATGAGATCAAGAGGCTTTTCGTCGAC CTGTTGAAGCAGCAGCGGCCGCCAAGTATTTGGACCGGGCGTCATCGGTT TTCCCAGGGGATCGAGGCTTTCACTCTATAGACCTTGATAAGAAACTTTC AATTTTCTGGCGTGACGGAGGCTTGGTTGCTAAGAGGCTCCTTCCCCCCT CGGCGAATAGTTGGTATTATTCGAGCTCGTGGACGTTATACGCCGATATT TTGGATGACTGTTTTTTAAGAAACCAGGTCTAGTTCGGGCCAACGCCAAC AGGTCCGCTGATGCATTGAGTCTTGGGGTAAACCTTTCATGGCTATTGCT ACTGTTTCGTAGCTTGGGTTCTCTTATTTATATATGTTCGCGTAGGGGGG TACTATGTTATCATGGGTTCGGCTGGTGTGAGGCGGCACCGAATGCGGCT TGGAACTGAAAGAGACTCGATTTTGCACCTCTACTGTATTTTGCTGTTTG GCCTTTTCTTGTCTTGATGTGGTTATGATATGATGTGATGTGATCCGACA ATTTGCGACGTCATGTTTTATAGGACAAAGAGCCGCGACGGACCGCGGAC GGCTTCGAGGAGGCGGTGGGAGTCAACCATCTTGGTCACTTCTTGCTTTG CAACCTGCTGCTGGATGAGTTGAAGCAGTCTCGCGTCGTCTTCATCGGGA CCGAAACGCACAACCCAGGAAGCATCGCCGGAAAGATCCCTCCCCAGGTA AAACATGCCGCTAATAGGTGCAGAACTCCAACCCAGGGATGTAATGGAAT CGGGTATACAAGGGTCAAATTGGCAAAGCGATTGGGTACGTATTTACCTC TTTTAAATACCTTTGTGGTCTAGTAGTTAAGCCCGATCCCTAATAGGGGT GGGCATACAACGAGCCCCGCTGGGGACGTCTCGTTGCTTGTCGGTGCATC TAATTTGAACCATGTGAAGGTTGATATATAGTCTATAGGAGGGAACCGTA GCAGTGCATCCAGCTTCTACACTAGAGCTCTATATACACCACGAACAAAA GTACGCAAGAACGAACGTGCTTCACGCCGTCTTCTCCATCGCTCATAAGC CAGAAAATCCAGGCGATGTGAACATGGATAGCGGGGTGGACGTCCATGGC CAATTGCCAGCGATGTCCACATCGCGTGGAATTTTTGGCTGGTGAGCGAA GGGGGCGACGGCGTGGAGCACGTTCGTTATTGCGCGTCATGAGGCGTTGC GACCTTGAGAGTTGAGACTGGCGGCGCGGACGTGAGAGAGGAGGAGGGTG GAAGGATGGTACATTGCCGCGTCAAAATATTTTTTTGCATGTGTTTGTGC GTGTTGAGCAAGTGTCGATGATGTTTTATTTTGCCCAGTGCGAGGCGGTG TCAAGTTGCCTCGAATTGTCCAGTGTAGCTGCGTCCTTTCCATTTAGTCC CTGAAAACACCTCAATCGAGAATGCCGAGGGCGCTCAATCTCGGGAAACC CGCAAGCCTGAACTATACCCAATCACACTACCCAAAAAAACAGCAAGCCT TACGCTAATCAGAGTACGCACCGCCTGTCCCACGTCATGCAAACCTACAA AACAAACTTCCTGCGAGATGGTGGTGTGCTGCTGTATGTTATCATGGCGT ATCTTCCCGGTTATTAGGCGCGTAGCAAGAGCGAGTACGACACGGCATGC ATGAGTATACCGAAGTATGACAACTAGGGTTTGGGTTAATATTTTCGTAA CAAAAATGAAACACGTTGTGTAACTTCGTGCGCGTTTTTGTCCACATCAA ATTGACTTGTTTTATGTGACCCCCTGCCTCGCCACCGTGTGTTGTGCAAA CTCAGGCTCACTTGGGGGACTTGGAGGGACTCGCGAAGAACGAACCCATG GTTGACGGCATCAAGTACGAGCCTACGAAGGTGCGCTTTTGCGATGGAGT TGCGTCTTTCGTTGTGTTTGGCGCGGCCACAAACAAACCGTTGTGCGTAT GAAAAGGAAGTGGTACGTAGGTGTGTAAGAAGAGAGCACACGATAAATGT TATGTTCCGTTGTGGCTTCCCTTGGTGACTTCACACTTCGGCACGTGTTC GTTGAGAAGAGTGTGCCACCTCTGTGAACGGTGCCTTTGCGAGCGCTTGG AGTTGTTGGCGCTCCATTTTTCTGGTTATGATGATTGATGGTGTTGTTGG TTGCAACCGTCAAACGAAGTGAAGCTGTCGGGGGGGTTGAAAAGGCTTCC TCGTATCACGGTACAGTAAATACGGACAATGTTATGTTTTGTTGCTCCAA AGAGTGACGACGTGTACCAACTGGCACACGCGGCTGTTATCGTCGTGTCT TCTGGTTCGCGCCCACAGGGGATACAGGACCTTGTGATAGCGATTGTTGA TAAAGGTTGTGCTCTCTTGTCCGCCTCGATGCATCGAAACCCCCTCAGTG TTCTTGTTTTTTACTGACTTTGGCGTTGTTGCGCCTCACAGGAATTGCAC ACGACTCTGCGGGGGGCCGGGGGGGCAGGCAGGCGTTGCTATACGATGTT GCGTTTTTTGTGTTGTACCGTTACATATGACAGCCTCGGTCGATTGCATG CGTCAGCCACTCTCGACAAATCCCAAACACGTTGTGTCATGTGGGCGCGG TTTTTGAATTGCAACGATGCAGGCGTACAAGGACTCTAAGGTGTGCAACG TTCTCATGATGAGGGAGATGGACAAGCGGTTCGCGTCTAACGGGATGGTC GTCAGCGCTCTGTTCCCCGGGTGCATCGCCGAGTCGCCGCTTTTCCGCGA GAAGCGCGGGTGGTTCAGGACTTTATTCCCGGTCTTCCAGAAGTACATCA CCAAGCAGTTCGTGTCCACGGAGGCGAGTGTTGATTGAGTAGAAACATCG TGGTAACCGTGGAGGTTTTGTCTCTTTTGACGAGGGGATGGACACGGCTA AGCTGCCTTCGAGCGGTCTTTAGTTTGTTGGTGCTAGTTTGTGTTGTTTG AAGTGTTTTATCCAGCAAAAAACCAACGCTACGGCTACAGTACTGTAGTT GCCCCTCCTTGTCACTGGCGCCATACACGAAACATGAGCCGAATCGGTCG AAGGAGTTAGTGGTTTGTTTGTTTTATTTCCCACCGGTTGTCTTTTGAAA GCAAGCAGTGCGCCCGGCGAGAAAACAACGTGGACAGAGAAAAAAATTCT CAGCGCTGCTCTTCCCCACACCCCTTATGGTACAACCATTGTACAACGTT CCATTCCATCGGTTGCGCGTATCGGTGAACATATCATCATTGGTCGAACG AATAAGGGCAAGTTGTTCAAAAATCGTGACTACACGGCACTCAATTGCAG GAGCGACCGCCCCCCGCCCCGCCTCTCAGAACACCTGGTAGTAACGATTA GAACAGCTACTGTTTGCAAAACAAGAATATGACCCCCCCCGAAATGAGTA TACCCCCCTCCCCCTCCCCCATCTATGGCCATACGAGGGTCTATAGTCAG ACGACTGTAATAGAAGTATGGCCATGCATGAAATGAGTACCCCCCCCCCC CCCCCAATCCCCTTTCCGCGAAACGCCACCAAATTTCTTACAGGAGGCGG GCAGGCGTGTATCGGAAGTGGTTTCGTCGGACAAGTTTACGACATCAGGA GCGTACTGGCGGTGGAACGGTCAGGATGCGGAGGCGACGGCTAGGGAGAA CGTCGTTTCGGACGAAGCCATGGACGACGCGCGGTGTGAGAAGCTCTGGA AGATCAGCTCCGACCTCGTGGGCATCTAA
back to top

Coding sequence (CDS) from alignment at D-herbacea_F_contig112:787887..795715-

>mRNA_D-herbacea_F_contig112.984.1 ID=mRNA_D-herbacea_F_contig112.984.1|Name=mRNA_D-herbacea_F_contig112.984.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2394bp|location=Sequence derived from alignment at D-herbacea_F_contig112:787887..795715- (Desmarestia herbacea DmunF female)
ATGACTATCGTGCGAGGAGTGACCAGCAGCGCGCTGAGCGTCGTGGGCTG
TCTAGCATGCATCGCTTGCGGTACCGTGGACGCTTTCGTCGGGCCCATGT
CCGCCGCTCGTAGCTCTATTACGCGTGTCAACAACAAGCACGTTGCCTCT
GCGGCGTATTCAAGGGCTCCTCAGGGTTGCTTTACGAGCACCAGCACTGT
GGGGCTAGACAACAGCCGCGCACGCCTGTTGCGGACGGCAGCTGGCTCGA
GTGGGGTGTCGATGATGGCGGGAAACGCGAAGAAGACAGCCATCATTACG
GGTGCTTCTTCCGATGACTATCGTGCGAGGAGTGACCAGCAGCGCGCTGA
GCGTCGTGGGCTGTCTAGCATGCATCGCTTGCGGTACCGTGGACGCTTTC
GTCGGGCCCATGTCCGCCGCTCGTAGCTCTATTACGCGTGTCAACAACAA
GCACGTTGCCTCTGCGGCGTATTCAAGGGCTCCTCAGGGTTGCTTTACGA
GCACCAGCACTGTGGGGCTAGACAACAGCCGCGCACGCCTGTTGCGGACG
GCAGCTGGCTCGAGTGGGGTGTCGATGATGGCGGGAAACGCGAAGAAGAC
AGCCATCATTACGGGTGCTTCTTCCGGCATCGGACTCGAGGCCGCTAAAT
TCTTGGCTGCGTCGGGCGACTGGCACGTGATCATGGCCGTGCGGTCGTTC
GCCAAGGCCGAGGCGTCGGCGAAGGAATTGGGGATGGACGAGTCTAGCTA
CACGGTGATGGACCTCGACCTGGCCTCTCTCAACAGCGTGCGGAATTTCG
TTAAGGCGTTGAAGGCCGCCAAGGTTAAGCCGGACGCGCTCGTCTGCAAC
GCCGCCGTTTGGTACCCCAAGGCATCGGACTCGAGGCCGCTAAATTCTTG
GCTGCGTCGGGCGACTGGCACGTGATCATGGCCGTGCGGTCGTTCGCCAA
GGCCGAGGCGTCGGCGAAGGAATTGGGGATGGACGAGTCTAGCTACACGG
TGATGGACCTCGACCTGGCCTCTCTCAACAGCGTGCGGAATTTCGTTAAG
GCGTTGAAGGCCGCCAAGGTTAAGCCGGACGCGCTCGTCTGCAACGCCGC
CGTTTGGTACCCCAAGGACAAAGAGCCGCGACGGACCGCGGACGGCTTCG
AGGAGGCGGTGGGAGTCAACCATCTTGGTCACTTCTTGCTTTGCAACCTG
CTGCTGGATGAGTTGAAGCAGTCTCGCGTCGTCTTCATCGGGACCGAAAC
GCACAACCCAGGAAGCATCGCCGGAAAGATCCCTCCCCAGGACAAAGAGC
CGCGACGGACCGCGGACGGCTTCGAGGAGGCGGTGGGAGTCAACCATCTT
GGTCACTTCTTGCTTTGCAACCTGCTGCTGGATGAGTTGAAGCAGTCTCG
CGTCGTCTTCATCGGGACCGAAACGCACAACCCAGGAAGCATCGCCGGAA
AGATCCCTCCCCAGGCTCACTTGGGGGACTTGGAGGGACTCGCGAAGAAC
GAACCCATGGTTGACGGCATCAAGTACGAGCCTACGAAGGCTCACTTGGG
GGACTTGGAGGGACTCGCGAAGAACGAACCCATGGTTGACGGCATCAAGT
ACGAGCCTACGAAGGCGTACAAGGACTCTAAGGTGTGCAACGTTCTCATG
ATGAGGGAGATGGACAAGCGGTTCGCGTCTAACGGGATGGTCGTCAGCGC
TCTGTTCCCCGGGTGCATCGCCGAGTCGCCGCTTTTCCGCGAGAAGCGCG
GGTGGTTCAGGACTTTATTCCCGGTCTTCCAGAAGTACATCACCAAGCAG
TTCGTGTCCACGGAGGCGAGTGCGTACAAGGACTCTAAGGTGTGCAACGT
TCTCATGATGAGGGAGATGGACAAGCGGTTCGCGTCTAACGGGATGGTCG
TCAGCGCTCTGTTCCCCGGGTGCATCGCCGAGTCGCCGCTTTTCCGCGAG
AAGCGCGGGTGGTTCAGGACTTTATTCCCGGTCTTCCAGAAGTACATCAC
CAAGCAGTTCGTGTCCACGGAGGCGAGTGCGGGCAGGCGTGTATCGGAAG
TGGTTTCGTCGGACAAGTTTACGACATCAGGAGCGTACTGGCGGTGGAAC
GGTCAGGATGCGGAGGCGACGGCTAGGGAGAACGTCGTTTCGGACGAAGC
CATGGACGACGCGCGGTGTGAGAAGCTCTGGAAGATCAGCTCCGACCTCG
TGGGCATCTAAGCGGGCAGGCGTGTATCGGAAGTGGTTTCGTCGGACAAG
TTTACGACATCAGGAGCGTACTGGCGGTGGAACGGTCAGGATGCGGAGGC
GACGGCTAGGGAGAACGTCGTTTCGGACGAAGCCATGGACGACGCGCGGT
GTGAGAAGCTCTGGAAGATCAGCTCCGACCTCGTGGGCATCTAA
back to top