mRNA_D-herbacea_F_contig112.984.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig112.984.1 vs. uniprot
Match: D8LBZ8_ECTSI (Protochlorophyllide reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBZ8_ECTSI) HSP 1 Score: 566 bits (1459), Expect = 1.000e-199 Identity = 298/396 (75.25%), Postives = 336/396 (84.85%), Query Frame = 3
Query: 111 IVRGVTSSALSVVGCLACIACGTVDAFVGPMSAARSSITRVNNKHVASAAYSRAPQGCFTSTSTVGLDNSRARLLRTAAGSSGVSMMAGNAKKTAIITGASSGIGLEAAKFLAASGDWHVIMAVRSFAKAEASAKELGMDESSYTVMDLDLASLNSVRNFVKALKAAKVKPDALVCNAAVWYPKDKEPRRTADGFEEAVGVNHLGHFLLCNLLLDELKQSRVVFIGTETHNPGSIAGKIPPQAHLGDLEGLAKNEPMVDGIKYEPTKAYKDSKVCNVLMMREMDKRFASNGMVVSALFPGCIAESPLFREKRGWFRTLFPVFQKYITKQFVSTEASAGRRVSEVVSSDKFTTSGAYWRWNGQDAEATARENVVSDEAMDDARCEKLWKISSDLVGI 1298
+VRG T+SALS V C+AC+ VGP AR S TRVN A AA SRAP + + + +LR+++ ++M AG KKT IITGASSGIGLE AKFLAASGDWHVI+AVRSFAKAEA AK+LGMD S+YTVM+LDLASLNSVRNFV +KAAKVKPDALVCNAAVW+PKDK+PRRTADGFEEA+GVNHLGHFLL NLL+DELKQSRVVFIGTETHNPGSIAGKIPPQAHLGDL+GLAKNEPM+DG+KYEPTKAYKDSKVCNVLMMREM+KR++S GMVVSALFPGCIAESPLFREKRGWFR FPVFQK++T+Q VS E AGRR+++VVSSDK ++SG YWRWNGQDAEATARENVVSDEAMD+ARCEKLW+ISSDLVGI
Sbjct: 1 MVRG-TASALSAVACVACLLHNVAGFVVGPTPTARGSFTRVNRASSA-AAVSRAPGTLAPAAAARTQVGHASAVLRSSSAGREMTMAAGG-KKTCIITGASSGIGLEGAKFLAASGDWHVILAVRSFAKAEAGAKDLGMDPSTYTVMNLDLASLNSVRNFVAEIKAAKVKPDALVCNAAVWHPKDKKPRRTADGFEEAIGVNHLGHFLLVNLLMDELKQSRVVFIGTETHNPGSIAGKIPPQAHLGDLDGLAKNEPMIDGVKYEPTKAYKDSKVCNVLMMREMNKRYSSGGMVVSALFPGCIAESPLFREKRGWFRAGFPVFQKFVTRQLVSVE-EAGRRMADVVSSDKLSSSGTYWRWNGQDAEATARENVVSDEAMDEARCEKLWQISSDLVGI 392
BLAST of mRNA_D-herbacea_F_contig112.984.1 vs. uniprot
Match: A0A7S1TKW4_9RHOD (Protochlorophyllide reductase n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKW4_9RHOD) HSP 1 Score: 351 bits (901), Expect = 1.030e-114 Identity = 186/325 (57.23%), Postives = 236/325 (72.62%), Query Frame = 3
Query: 384 KKTAIITGASSGIGLEAAKFLAASGDWHVIMAVRSFAKAEASAKELGMDESSYTVMDLDLASLNSVRNFVKALKA----AKVKPDALVCNAAVWYPKDKEPRRTADGFEEAVGVNHLGHFLLCNLLLDELKQS-------RVVFIGTETHNPGSIAGKIPPQAHLGDLEGLAKN----EPMVDGIKYEPTKAYKDSKVCNVLMMREMDKRFASNGMVVSALFPGCIAESPLFREKRGWFRTLFPVFQKYITKQFVSTEASAGRRVSEVVSSDKFTTSGAYWRWNGQDA-----EATARENVVSDEAMDDARCEKLWKISSDLVGI 1298
K +ITG+SSG+GLEAAK LAA+GDW V+MAVRSFAKAE + +E ++ +Y VM LDLASL SVR FV LK+ A++ +ALVCNAAVWYPKDK+PR TADGFEE VG NHLGHFLL +LL+ +L +S R+VFIGTETHNP SIAGK+PPQA LG L+GL K PM+DG K+EPTKAYKDSKVCN + M++M R++ G+VVSALFPGC+A S LFREKRGWF + FP FQK ITKQ+V+T+ AG R++ VV++ ++TSGAYW+WN + +S +A D+ L++ S++LVGI
Sbjct: 70 KDVVVITGSSSGLGLEAAKELAATGDWLVVMAVRSFAKAEKAMREANINPENYRVMSLDLASLTSVRQFVDELKSFLSRARLDLNALVCNAAVWYPKDKKPRFTADGFEEHVGTNHLGHFLLAHLLVSDLHKSAKTGLSPRLVFIGTETHNPDSIAGKVPPQADLGQLQGLLKGLGEEAPMIDGKKFEPTKAYKDSKVCNAITMKQMSDRYSPRGVVVSALFPGCVASSGLFREKRGWFNSFFPWFQKNITKQYVTTQ-EAGHRLASVVANPLYSTSGAYWKWNSLKLGVGKMDVVGTNIAISQQARDEKVAGVLYEKSAELVGI 393
BLAST of mRNA_D-herbacea_F_contig112.984.1 vs. uniprot
Match: L1JNU2_GUITC (Protochlorophyllide reductase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JNU2_GUITC) HSP 1 Score: 350 bits (899), Expect = 1.770e-111 Identity = 187/329 (56.84%), Postives = 239/329 (72.64%), Query Frame = 3
Query: 360 VSMMAGNAKKTAIITGASSGIGLEAAKFLAASGDWHVIMAVRSFAKAEASAKELGMDESSYTVMDLDLASLNSVRNFVKALKAAKVKPDALVCNAAVWYPKDKEPRRTADGFEEAVGVNHLGHFLLCNLLLDELKQS--RVVFIGTETHNPGSIAGKIPPQAHLGDLEGLAKN-EPMVDGIKYEPTKAYKDSKVCNVLMMREMDKRFA-SNGMVVSALFPGCIAESPLFREKRGWFRTLFPVFQKYITKQFVSTEASAGRRVSEVVSSDKFTTSGAYWRWNGQ----------DAEATARENVVS--DEAMDDARCEKLWKISSDLVGI 1298
++ + + +KT +ITGASSGIGL+ AK ++A WHVIMAVRS++KA +A+E+GM+ +YT+M+LDLASL+SVR+FV L+ DA+VCNAAVWYP+D PR T DGFEEAVG NHLGHFLLCNLLL +L + RVVFIGTET N G +AG IPP A LG LEG+A + +DG K+EPTKAYKDSKVCN ++MREM+KR+ S G++V+A+FPGCIAESPLFR+KR WFR LFP FQK ITKQFV E AG+RV+ VV+ ++ G YW+WN Q D + A N+V EA+D+ E +W +SS LVG+
Sbjct: 86 INAQSSDGRKTVVITGASSGIGLQTAKAMSADKGWHVIMAVRSYSKAARAAEEIGMEPGTYTIMNLDLASLSSVRDFVNQLRLLGRPIDAIVCNAAVWYPRDTAPRLTVDGFEEAVGTNHLGHFLLCNLLLGDLPEGDGRVVFIGTETANDG-LAGLIPPVADLGKLEGMAAGMKSTIDGGKFEPTKAYKDSKVCNAIVMREMNKRYGKSRGLIVNAMFPGCIAESPLFRQKRAWFRWLFPKFQKAITKQFVPEEV-AGQRVANVVADEELGVGGTYWKWNAQAGKDFTRVAFDQQKQAAANLVKIPAEALDEMISEAVWDLSSALVGL 412
BLAST of mRNA_D-herbacea_F_contig112.984.1 vs. uniprot
Match: S0F3U3_CHOCR (Protochlorophyllide reductase n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3U3_CHOCR) HSP 1 Score: 340 bits (873), Expect = 4.710e-111 Identity = 182/313 (58.15%), Postives = 227/313 (72.52%), Query Frame = 3
Query: 387 KTAIITGASSGIGLEAAKFLAASGDWHVIMAVRSFAKAEASAKELGMDESSYTVMDLDLASLNSVRNFVKALKAAKVKP-DALVCNAAVWYPKDKEPRRTADGFEEAVGVNHLGHFLLCNLLLDELK--QSRVVFIGTETHNPGSIAGKIPPQAHLGDLEGLA---KNEP-MVDGIKYEPTKAYKDSKVCNVLMMREMDKRFASNGMVVSALFPGCIAESPLFREKRGWFRTLFPVFQKYITKQFVSTEASAGRRVSEVVSSDKFTTSGAYWRWNGQDAEATARENVVSDEAMDD--ARCEKLWKISSDLVGI 1298
KTAI+TGASS IGL AAK LA GD+HV+MAVR+ KAEA+AK +GM SYTV+ LDLA L SVR FV A+ A V P ALVCNAA W+P+DK+PR T DGF+E V VNHLGHFLL NLLL +LK + R VF+ T+THNP ++ GK+PPQA LG+LEGL K P +DG K+EPTKAYKDSKVCN+L M EM++R+ ++G+ SA+FPGCIA+S LFREKRGWFR LFP+FQ+YITKQ V E AGRRV+ V S +F SG YW+W G + + V + + + EKLW++S+ LV +
Sbjct: 67 KTAIVTGASSSIGLHAAKELAGRGDYHVVMAVRNPGKAEAAAKAVGMPADSYTVVPLDLARLQSVREFVTAVGVAGVPPVAALVCNAATWHPRDKKPRFTEDGFDETVQVNHLGHFLLANLLLPQLKLNRGRCVFLATQTHNPDTLPGKVPPQADLGELEGLVGGFKTLPGTIDGKKFEPTKAYKDSKVCNILTMTEMNRRYGTDGVTFSAVFPGCIAQSELFREKRGWFRALFPLFQRYITKQLVPVE-EAGRRVALVASDGRFGDSGRYWQWRGSYLQGMDKTTPVPIDPTEREAGKAEKLWELSAKLVNM 378
BLAST of mRNA_D-herbacea_F_contig112.984.1 vs. uniprot
Match: A0A7S0Z1U2_9CRYP (Protochlorophyllide reductase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z1U2_9CRYP) HSP 1 Score: 346 bits (888), Expect = 2.750e-110 Identity = 183/320 (57.19%), Postives = 235/320 (73.44%), Query Frame = 3
Query: 384 KKTAIITGASSGIGLEAAKFLAASGDWHVIMAVRSFAKAEASAKELGMDESSYTVMDLDLASLNSVRNFVKALKAAKVKPDALVCNAAVWYPKDKEPRRTADGFEEAVGVNHLGHFLLCNLLLDELKQS-RVVFIGTETHNPGSIAGKIPPQAHLGDLEGLAKN-EPMVDGIKYEPTKAYKDSKVCNVLMMREMDKRFA-SNGMVVSALFPGCIAESPLFREKRGWFRTLFPVFQKYITKQFVSTEASAGRRVSEVVSSDKFTTSGAYWRWN---GQDAE-------ATARENVVS--DEAMDDARCEKLWKISSDLVGI 1298
++T IITG+SSGIGL AA LA+ WHVIMAVRS++KA+ +A++ G E SYTVM +DLASL SVR+F + KA + PDALVCNAAVWYP+D EPR +ADG+EE+V NHL HFLLC L+L + + +V+FIGTET N G IAGK+PP A LG LEG+ K +DG +YEPTKAYK+SKVCN ++MREM+KR+A S G+ V+A+FPGCIAESPLFR+KR WFR LFP+FQKY+TKQFV E AGRR+++V+ ++ GAYW+WN G DAE +T NVV EA+D+ E++W +S L G+
Sbjct: 101 RRTVIITGSSSGIGLAAATELASKRGWHVIMAVRSYSKAQLAAQKAGFPEDSYTVMPVDLASLKSVRDFAASFKATGLTPDALVCNAAVWYPQDLEPRLSADGYEESVATNHLAHFLLCQLMLPIIPRGGKVLFIGTETANDG-IAGKVPPVADLGTLEGMKKGMTTTIDGGEYEPTKAYKESKVCNAIVMREMNKRYAESRGITVNAMFPGCIAESPLFRQKRDWFRWLFPLFQKYVTKQFVE-EKEAGRRIADVIDKEELAVGGAYWKWNAKSGIDAEFKISDENSTPAANVVRIPSEALDEVTAEQVWDLSCGLTGV 418
BLAST of mRNA_D-herbacea_F_contig112.984.1 vs. uniprot
Match: A0A6T8NUL2_HEMAN (Protochlorophyllide reductase n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8NUL2_HEMAN) HSP 1 Score: 345 bits (886), Expect = 4.270e-110 Identity = 184/320 (57.50%), Postives = 235/320 (73.44%), Query Frame = 3
Query: 384 KKTAIITGASSGIGLEAAKFLAASGDWHVIMAVRSFAKAEASAKELGMDESSYTVMDLDLASLNSVRNFVKALKAAKVKPDALVCNAAVWYPKDKEPRRTADGFEEAVGVNHLGHFLLCNLLLDEL-KQSRVVFIGTETHNPGSIAGKIPPQAHLGDLEGLAKNEPM-VDGIKYEPTKAYKDSKVCNVLMMREMDKRFA-SNGMVVSALFPGCIAESPLFREKRGWFRTLFPVFQKYITKQFVSTEASAGRRVSEVVSSDKFTTSGAYWRWN---GQDAE-------ATARENVVS--DEAMDDARCEKLWKISSDLVGI 1298
++T IITG+SSGIGL AA LA WHVIMAVRS++KA+ +A++ G+ E SYTVM +DLASL SVR+F + KA + PDALVCNAAVWYP D EPR +ADG+EE V NHL HFLLC L+L + K RV+FIGTET N G IAGK+PP A LG+LEG+ + +DG +YEPTK+YK+SKVCN ++MREM+KR+A S G+ V+A+FPGCIAESPLFR+KRGWFR LFP+FQKY+TKQFV E AGRR+++ + D+ GAYW+WN G DAE +T NVV EA+D+ E++W +S+ L G+
Sbjct: 92 RRTVIITGSSSGIGLAAATELACKRGWHVIMAVRSYSKAKLAAQKAGIPEDSYTVMSVDLASLQSVRDFAASFKATGLVPDALVCNAAVWYPLDIEPRLSADGYEENVATNHLAHFLLCQLMLPIIPKGGRVLFIGTETANDG-IAGKVPPVADLGNLEGMKQGMSYTIDGGEYEPTKSYKESKVCNAIVMREMNKRYAESRGITVNAMFPGCIAESPLFRQKRGWFRWLFPLFQKYVTKQFVE-EKEAGRRIADTIDLDELAVGGAYWKWNAKSGIDAEFVISDENSTPAANVVRIPGEALDEVTAEQVWDLSAGLTGV 409
BLAST of mRNA_D-herbacea_F_contig112.984.1 vs. uniprot
Match: A0A5J4YUK9_PORPP (Protochlorophyllide reductase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUK9_PORPP) HSP 1 Score: 339 bits (870), Expect = 4.400e-110 Identity = 179/327 (54.74%), Postives = 235/327 (71.87%), Query Frame = 3
Query: 378 NAKKTAIITGASSGIGLEAAKFLAASGDWHVIMAVRSFAKAEASAKELGMDESSYTVMDLDLASLNSVRNFVKALKA--AKVKPD--ALVCNAAVWYPKDKEPRRTADGFEEAVGVNHLGHFLLCNLLLDELKQS-------RVVFIGTETHNPGSIAGKIPPQAHLGDLEGLAKN----EPMVDGIKYEPTKAYKDSKVCNVLMMREMDKRFASNGMVVSALFPGCIAESPLFREKRGWFRTLFPVFQKYITKQFVSTEASAGRRVSEVVSSDKFTTSGAYWRWN----GQDAEATARENV-VSDEAMDDARCEKLWKISSDLVGI 1298
N K +ITGASSG+G+ AAK LA++GDW V++AVRSF+KAE + +E ++ +Y ++ LDLASL SVR F ++LK AK K D A+VCNAA W+PKDK+PR TADGFEE VG NHLGHFLL +LL D+L++S R+VF+GTETHNP SIAGK+PPQA LG L GL K M+DG K+EPTKAYKDSKVCN + M++M R+ G+VVSA+FPGC+A S LFREKRGWF + FP FQK ITKQ+VS E AG R++ VV++ ++T+GAYW+WN G N+ +S +A D+ +L+++S ++VGI
Sbjct: 65 NQKDVVVITGASSGLGMAAAKELASTGDWLVVLAVRSFSKAEKALREANLNPKNYRILPLDLASLTSVRQFSESLKTMLAKEKLDLNAIVCNAATWHPKDKKPRYTADGFEEHVGTNHLGHFLLAHLLADDLRKSARTGLAPRLVFLGTETHNPDSIAGKVPPQADLGRLAGLEKGLCGENAMIDGKKFEPTKAYKDSKVCNAITMKQMSDRYGPRGVVVSAMFPGCVASSGLFREKRGWFNSFFPWFQKNITKQYVSVE-EAGHRLAAVVANPLYSTTGAYWKWNSLKLGDGTMDPVGTNIAISQQARDEELANRLYELSCEMVGI 390
BLAST of mRNA_D-herbacea_F_contig112.984.1 vs. uniprot
Match: A0A1X6NIP3_PORUM (Protochlorophyllide reductase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NIP3_PORUM) HSP 1 Score: 333 bits (854), Expect = 4.610e-109 Identity = 178/321 (55.45%), Postives = 229/321 (71.34%), Query Frame = 3
Query: 369 MAGNAKKTAIITGASSGIGLEAAKFLAASGDWHVIMAVRSFAKAEASAKELGMDESSYTVMDLDLASLNSVRNFVKALKAAKVKP-DALVCNAAVWYPKDKEPRRTADGFEEAVGVNHLGHFLLCNLLLDELKQS--RVVFIGTETHNPGSIAGKIPPQAHLGDLEGL-----AKNEPMVDGIKYEPTKAYKDSKVCNVLMMREMDKRFASNGMVVSALFPGCIAESPLFREKRGWFRTLFPVFQKYITKQFVSTEASAGRRVSEVVSSDKFTTSGAYWRWNG---QDAEATARENVVSDEAMDDARCEKLWKISSDLVGI 1298
MA + T+IITGASS +G+ AAK L A GD HV+MAVR AKA A E G E +YT++ +DLASL+SVR+FV A +A + +LVCNAAVWYP+DKEPR T DGF+E + VNHLGHFLL NLL+ +LK++ RVVF+ T THNP +IAGK+PPQA+LGDL GL + VDG K+EPTKAYKDSKVCNVL M + +R A +G++VSA++PGCIA+S LFR+KRGWFR FP+FQKY+TKQ+VS E AGRRV++V F G YW W G + A+ T V S E + A+ ++LW++S+ VG+
Sbjct: 1 MAASQPYTSIITGASSSVGMFAAKALVARGDTHVVMAVRDTAKAAKVAAEFGFAEGTYTILPVDLASLDSVRSFVSAYQAGGFRGLSSLVCNAAVWYPRDKEPRLTGDGFDETLQVNHLGHFLLVNLLMGDLKRACGRVVFLATPTHNPDTIAGKVPPQANLGDLAGLEAAVAGTSSGTVDGGKFEPTKAYKDSKVCNVLTMTALHERAAKDGVIVSAVYPGCIADSELFRQKRGWFRWFFPLFQKYVTKQYVSEE-EAGRRVADVAGGAAFGDGGGYWMWKGSYLEGADKTTPTRVPSTE-REGAKADRLWELSAKAVGL 319
BLAST of mRNA_D-herbacea_F_contig112.984.1 vs. uniprot
Match: A0A7S2ZBT5_9RHOD (Protochlorophyllide reductase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZBT5_9RHOD) HSP 1 Score: 335 bits (859), Expect = 5.530e-109 Identity = 173/319 (54.23%), Postives = 224/319 (70.22%), Query Frame = 3
Query: 387 KTAIITGASSGIGLEAAKFLAASGDWHVIMAVRSFAKAEASAKELGMDESSYTVMDLDLASLNSVRNFVKALKAAKVKPDALVCNAAVWYPKDKEPRRTADGFEEAVGVNHLGHFLLCNLLLDEL----------KQSRVVFIGTETHNPGSIAGKIPPQAHLGDLEGLAKN--EP--MVDGIKYEPTKAYKDSKVCNVLMMREMDKRFA-SNGMVVSALFPGCIAESPLFREKRGWFRTLFPVFQKYITKQFVSTEASAGRRVSEVVSSDKFTTSGAYWRWNGQDAEATARENVVSDEAMDDARCEKLWKISSDLVGI 1298
KT +ITGASSGIG AAK L+ SG+W+VIMAVR+ KA A+E +D+ SY +MDL+L SL SVR FVK LK +V D LVCNAA+W+PKD +PR T DG+EEAV VN+ GHFLL NL++ QSRVVFIGTETHNP ++ GKIPPQA LGD++GL EP M+ G K+EPTKAYKDSKVC ++M+E+D+R+ N + + LFPGC+A+S LFREKR WFR++FP FQ Y+T+Q+VS E AG R ++V S +F GAYWRW G E+ E VS EA+D + ++LW +++ L G+
Sbjct: 59 KTVVITGASSGIGKHAAKELSRSGEWNVIMAVRNPEKAAKVAEEYDLDKGSYKIMDLELGSLESVRKFVKTLKDDRVTVDTLVCNAAIWHPKDTKPRYTEDGYEEAVAVNYFGHFLLVNLMIQNSTIRPNLQRGQNQSRVVFIGTETHNPDTLPGKIPPQADLGDMQGLEAGFKEPIGMISGGKFEPTKAYKDSKVCISILMKELDRRYGRQNNITFTTLFPGCVAKSGLFREKRAWFRSIFPTFQAYVTQQYVSEEL-AGLRAAQVASESRFARGGAYWRWQGTAPESPVFEKDVSYEALDTEKAKRLWDLTAKLTGV 376
BLAST of mRNA_D-herbacea_F_contig112.984.1 vs. uniprot
Match: A0A383V7Z2_TETOB (NADPH-protochlorophyllide oxidoreductase n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383V7Z2_TETOB) HSP 1 Score: 332 bits (852), Expect = 9.570e-108 Identity = 172/312 (55.13%), Postives = 221/312 (70.83%), Query Frame = 3
Query: 378 NAKKTAIITGASSGIGLEAAKFLAASGDWHVIMAVRSFAKAEASAKELGMDESSYTVMDLDLASLNSVRNFVKALKAAKVKPDALVCNAAVWYPKDKEPRRTADGFEEAVGVNHLGHFLLCNLLLDELKQS-----RVVFIGTETHNPGSIAGKIPPQAHLGDLEGLAKNEPMVDGIKYEPTKAYKDSKVCNVLMMREMDKRFASNGMVVSALFPGCIAESPLFREKRGWFRTLFPVFQKYITKQFVSTEASAGRRVSEVVSSDKFTTSGAYWRWNGQDAEATARENVVSDEAMDDARCEKLWKISSDLVGI 1298
N K T +ITGASSG+GL AA LA +GDWHVIMA R F+KAE +AK++GM SYTVM LDLASLNSVRNFV+ +A+ + DALVCNAAV+ P KEP TADGFE +VG NHLGHFLL N+++++L S R+V +G+ T N ++AG +PP+A LGDL GL M+DG +++ KAYKDSKVCN+L MREM+KRF ++ S+L+PGCIAE+ LFR F++LFPVFQKY+TK +VS E AG+R+++VVS SG YW WN EN VS+E DD + KLW++S LVG+
Sbjct: 81 NLKPTVVITGASSGLGLNAAAALAKAGDWHVIMACRDFSKAEMAAKKMGMPAGSYTVMHLDLASLNSVRNFVENFRASGSRIDALVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLANMMMEDLNNSPSEHPRMVIVGSITGNTNTLAGNVPPKADLGDLSGLLSGSSMIDGKEFDGAKAYKDSKVCNMLTMREMNKRFGGGKVLFSSLYPGCIAETGLFRNHVPLFKSLFPVFQKYVTKGYVSEE-EAGKRLAQVVSDPNMGKSGVYWSWNNATG---VFENQVSEEVSDDGKAAKLWEVSEKLVGL 388 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig112.984.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig112.984.1 >prot_D-herbacea_F_contig112.984.1 ID=prot_D-herbacea_F_contig112.984.1|Name=mRNA_D-herbacea_F_contig112.984.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=399bp MTIVRGVTSSALSVVGCLACIACGTVDAFVGPMSAARSSITRVNNKHVASback to top mRNA from alignment at D-herbacea_F_contig112:787887..795715- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig112.984.1 ID=mRNA_D-herbacea_F_contig112.984.1|Name=mRNA_D-herbacea_F_contig112.984.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=7829bp|location=Sequence derived from alignment at D-herbacea_F_contig112:787887..795715- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig112:787887..795715- >mRNA_D-herbacea_F_contig112.984.1 ID=mRNA_D-herbacea_F_contig112.984.1|Name=mRNA_D-herbacea_F_contig112.984.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2394bp|location=Sequence derived from alignment at D-herbacea_F_contig112:787887..795715- (Desmarestia herbacea DmunF female)back to top |