mRNA_D-herbacea_F_contig111.962.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig111.962.1 vs. uniprot
Match: D7FI79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI79_ECTSI) HSP 1 Score: 1170 bits (3026), Expect = 0.000e+0 Identity = 909/1907 (47.67%), Postives = 1069/1907 (56.06%), Query Frame = 3
Query: 4425 GWGETEDRGGALGNRPIRRRCTEAKLMERREMAEDVLLSAAVVHFNSAPSFQDGEELRTSQQWLDLLPWSSPALERERNLHDAGKLAYDLGACDLVPLQLRLRLHGNAARAACAGVHEPGDVNGSSSSAVGAMEIVREVLRSNPGAYRDS-----TRGLGGRGEVSRGGGXXXXXGEHAGFGGLIRTPPGTGLIRLAGLMGLTSGIDHDRVRALVARTALENGDSAAACGLLSAAITRRPPRRRRGIGQGEERAGGDDGGTAFAPELCEALDLVVGWGVGGSSG-GDWATSAATAGQTAELCAQALSRCPSSQIGRLLAPWSRFEATRYLAGSTRLDREGAGEAGAAERAGVGGSAVPIGAEDSGSSLVRALIAEGMDASASASIARLVEGPFAVG-GERSPLSSALLLPVAAEVRSAGRPARAAEGALRLLLLREHG--VLEPRA-SVLGDAVISASLVGGMPE-EGPAAAEGTTALGVRDEEATTVAVDNLCIALALAALRSESSTHPRSLNPAAGGAGNGAVEGCGSVAGAGQE---AMEGVTLWLADGAAEEFGLGAVERGVGYALAAADGRGVLRALRALLEEAEARVTALREEAERDALKSGGECGASQDMTVEDEATN------AAMEPDESLVQGLHRRGVSVNRARRACVATRNSSVEAALAWCVEHAGDPTMDAPFVPQGRRRRGQRVSKDGSSGGGGFRNGALGSAGIGEESGGAAKRAAVRAHRTAAAALEAYVRARLSAIEMGGAGGDTGGG----EGVVPS--EEVGELSAVLASFRQRQSLGAAEERVRSLLPVGVDPGRFARDLRYRQSARDVLLLAREYPGTDLWDVAAAGARGLLGPGYATFRSKGLTAVSAAARAHSELRNGXXXXXXXXGLWGTLLEEG------RGGQGALQLVRSVFMGSAVDGKDLSHVDLLLRLMAEASGRAGERRGG--GGGSGSATGEVSRASPASGGKSGIDRRLSAHSGLVRRLLRSAPSGLDYKRLVGGDPLADPLADPRPAAAGGEEESTPGVTAGNPQASR-------------------TVAGLAAARARAMSELRSVAGLEHAPALSKLATRIPGLTGSTVHLAVAQRVLCGETGGLSAEALGLLRVGVEGGGGASSNSLGDREGAEAASASVYDLLSPLLWRMVPEDLVEVTAAACAPLTASALGGGGGDGTGYYPYRAVSRTAIDTTAESGSISSRVMVPFPDRMRPLRLTIRCRRRILAEASAALGDTSGSGGDASVAAAVALALERLVRVGALVTALEAASSATQDGARVATQLESAWTSVGWGGVHGSSGEKDVASRGAVEAAAAIAADAATGMALTGVPPVAVETVCSSMREALGITPDAATTRAVAKALGHAGGAASSSQRALELLDPARVYSNATSTGLECMVSSRDSEDRARALGRLRGLCAATATGPSVGTSFGTGRSSRSTSGEEDAAALVAAKAWRIILPALDRFCRAGE--FRSSGNHGSGSGDESADGGTTPAPSVVLWARREVLTLLGSFGAGDVLEAMTGDSAGTVDVXXXXXXXXXXXXXXXXXXGLSSPGDGSDSSARRM-SPT-SQLSVTFLRVAELAMEAFAARVSPEDVESWESRSSLLESLMGVMXXXXXXXXXXXSEMAAAGVTGDVLMFMREWWPKVILAAAESREWGLISWCFVTGLCVAFTQEAFEEALSSTMEACGAPPLVCIKVGLGSLHLSRHRAAARLAAEAFSKHEEGVSI-MDEEALHLVLSSPCLPQLSKTPVYPSLVALTLRLKASNV--SAQRPVSSPIPLTSTP----------------EFLLLAMACVGAHTRAAAIACETSGIHPGLRSLDGGLVVLGRRLREGGRRGGVSGAFGDG-GDEISGCLDPWMDMLRKRALDVFEADV 9914
G E + G G+ P + EAK ERR +AEDVLLSAA+ HFN+APSF+DGEELR +Q+WLDLLPWSSPAL RER LHDAG+LA+DLGA DLVPLQLRLRL G A + G G+ ++ A GAM +++EVLR NP ++RD G GG GE G AG GGLIRTPPGTGL+RLAGL+GLTSG + DRVRALVAR ALE G+ AAC +LS AI RR PR RR +GEE G FAPELCEALDLVV WG G+ G AT A +TA+LCAQALSRCP+SQIGRLL PWSRFEA RYLA + A G G GGS P ++ L+ GMD A+AS+ R + F G G S SS+ L R G AAEGALR+LLLREHG +L P + GD +A+ + E GPA A T A D+ A LCI LALA LR AGG + GS + QE A G T A AA+EFG+G VER VGYALAAADGR L ALRALLE AEARV LRE+AE A ++PDE LVQ L +RG+S NRARRACVAT+N+S EAALAWCVEH+ DP MDAPFV RR + G SG R + G G G RAA+R+ AAAALEAYVRARL+ + G EG +P+ EE+ EL AV+ SFRQRQSLG AEE+ R +LP VD GRFA D RYRQ R V+ LAREYP TD+W VAAA GLLG GY RSKG+ A +A +R +ELRN XXXXX RG Q ALQ+VR +F+G+A DG DL H+DLLLRLM EA+ R+G G GGG G G K+ I+RRL+AH GL+RRLL++AP GLDYK L+G DPLADPLADP AGG AGN A T AGLAAARARAM+ELRSVAGLEHA ALSKLA RIPG++ S V+LAVAQRVLCGE GGLS E + LLR GA G+ E AEA SASVY LLSPLL +M +DLVE+ AA CAP A GD GYYP R + A + P +RM PLRLT+RCRRR+LA A A GSG AL S + V +LE AW + +G + A+ E A + AA AA M G PPVAV+ VCS M+ ALG+ AT A A G A +A A ELL+P RVY+ A + L +VSS D +DRARAL LR +C A ATG S G G S R A + KAW ++ P L FCR G+ FR+S G APSVVLWAR EVLTL+ SFG V+ XXXXXXXXXXX GL GDG RR+ SP +QLSV FLRVAELAMEAF R SPEDV+SW SRS+ L L+ + + AG G + REWWPK+I A ++REW + C + C AFT E FEEAL ST+EA GAPPL IKVGL SLH SRH AA +L A S + G + +D++ L L LSSP L QL+KT +YPSL A+ +R K + S Q+P EFLLLAMAC G H+RAAA+ACETSG+HPGLR+LDGGLVVLG RLR GG G+ G G GD G +P LR+RAL FE DV
Sbjct: 1474 GGSEGNEDDGRAGS-PAEDKVEEAKREERRSIAEDVLLSAAMAHFNAAPSFEDGEELRWAQRWLDLLPWSSPALGRERGLHDAGRLAHDLGAVDLVPLQLRLRL-GGAGGSVGGGCTGGGNKAPAAVPADGAMGVIQEVLRCNPDSFRDGGGSALEEGWGGEGEGLFG----------AGKGGLIRTPPGTGLMRLAGLLGLTSGEEIDRVRALVARAALEAGEGGAACDILSVAILRRTPRGRR---RGEEEGGAMV--VPFAPELCEALDLVVEWGGSGAPRVGTAATGAPPPARTADLCAQALSRCPASQIGRLLGPWSRFEAVRYLAEAAAAAAPTADSGGVGVADGAGGSPCPGXXXXXXXAVASVLVGGGMDERAAASVERSLAVGFQAGEGSGSDDSSSWL------DRRLGVGGGAAEGALRVLLLREHGSSLLSPFSRDAAGDGDGAATKKKPLEEYAGPAEAAETAA--ALDDSVRREATSRLCILLALAELRLSEEEEEARAADTAGGQDQHSPSAFGSQGCSAQEVAAAGPGTTA-AAREAADEFGVGEVERAVGYALAAADGRAALGALRALLERAEARVKGLREDAEAAVAXXXXXXXXXXXXXXXXXXXXXXXXXAATVDPDEVLVQALGKRGISSNRARRACVATQNASREAALAWCVEHSADPAMDAPFVSS---RRAPQAPTSGGSG----RQASEVDGGSGSSGGDGRMRAAMRSRDRAAAALEAYVRARLAVVNGGTXXXXXXXXXXXVEGALPAVEEEIEELLAVITSFRQRQSLGLAEEKARGVLPATVDLGRFAGDPRYRQGPRGVIALAREYPDTDVWRVAAAATTGLLGRGYGKLRSKGVAASAAISRVETELRNSGAGXXXXXXXXXXXXXXXXXXXXXRGRQDALQVVRDLFVGAA-DGADLHHLDLLLRLMYEAAARSGPSGGAEAGGGVGG------------GAKNPIERRLNAHIGLMRRLLKAAPPGLDYKALIGDDPLADPLADPE---AGGGAPDAAAAFAGNSLAPXXXXXXXXXXXXXXXXXXXXTAAGLAAARARAMAELRSVAGLEHAAALSKLAARIPGMSVSAVYLAVAQRVLCGEAGGLSPEDMDLLR-------GALITDSGEEEEAEALSASVYHLLSPLLPKMAADDLVELAAAVCAPHAA-------GDHRGYYPCRRTTPAATSSPP-----------PADNRMAPLRLTVRCRRRLLAAAEVA----EGSGSAEXXXXXXXXXXXXXXXXXALDVVAPYVVSPRE---LVGRELEMAWAASNRARTGDDNGGAETAAL-QQERAVSAAAGAAADMVAMGAPPVAVDAVCSGMQAALGVR---ATEEAWAAPAGDA--SAKQGAAAAELLNPFRVYATAAAAILARLVSS-DPDDRARALEALRRVCTAAATG-----SGGWGGSHRDAXXXXXXXA--SGKAWGVLAPRLGLFCREGDSSFRASDGDGXXXXXXXXXX-EAAAPSVVLWARAEVLTLVRSFGGASVVAXXXXXXXXXXXXXXXXXXXXXXXQQHEESHGLVGDGDGG---GRRLPSPLPAQLSVPFLRVAELAMEAFGKRTSPEDVDSWVSRSAFLGLLVPATTSGATFGSREGDQSSPAGREGSIAALSREWWPKLISAGVDAREWEFVCRCLASTGCAAFTSEGFEEALWSTLEASGAPPLARIKVGLASLHPSRHVAATKLLASELSASDSGAAASVDDDTLQLALSSPSLGQLAKTALYPSLAAVAMRCKLWSCPPSQQQPQGQHXXXXXXXXXXXXXXXXXXXXXXMEFLLLAMACAGEHSRAAALACETSGVHPGLRTLDGGLVVLGMRLRAGG------GSLGAGAGDTGMGWFEPLAGALRERALQAFEEDV 3275
BLAST of mRNA_D-herbacea_F_contig111.962.1 vs. uniprot
Match: A0A6H5JKW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKW6_9PHAE) HSP 1 Score: 1048 bits (2711), Expect = 0.000e+0 Identity = 886/2105 (42.09%), Postives = 1055/2105 (50.12%), Query Frame = 3
Query: 4425 GWGETEDRGGALGNRPIRRRCTEAKLMERREMAEDVLLSAAVVHFNSAPSFQDGEELRTSQQWLDLLPWSSPALERERNLHDAGKLAYDLGACDLVPLQLRLRLHGNAARAACAGVHEPGDVNGSSSSAVGAMEIVREVLRSNPGAYRDSTRGLGGRGEVSRGGGXXXXXGEHAGF------GGLIRTPPGTGLIRLAGLMGLTSGIDHDRVRALVARTALENGDSAAACGLLSAAITRRPPRRRRGIGQGEERAGGDDGGTA---FAPELCEALDLVVGWGVGGSSG-GDWATSAATAGQTAELCAQALSRCPSSQIGRLLAPWSRFEATRYLAGSTRLDREGAGEAGAAERAGVGGSAVPIGAEDSGSSLVRALIAEGMDASASASIAR-LVEGPFAVGGERSPLSSALLLPVAAEVRSAGRPARAAEGALRLLLLREHG--VLEP---RASVLGDAVISASLVGGMPEEGPAAAEGTTALGVRDEEATTVAVDNLCIALALAALRSESSTHPRSLNPAAGGAGNGAVEGCGSVAGAGQEAMEGVTLWLADG---AAEEFGLGAVERGVGYALAAADGRGVLRALRALLEEAEARVTALREEAER-----------DALKSGGECGASQDMTVEDEATNAAM--EPDESLVQGLHRRGVSVNRARRACVATRNSSVEAALAWCVEHAGDPTMDAPFVPQGRRR-------RGQRVSK-DGSSGGGGFRNGALGSAGIGEESGGAAKRAAVRAHRTAAAALEAYVRARLSAIEMGGAGGDTGGG-----EGVVPS--EEVGELSAVLASFRQRQSLGAAEERVRSLLPVGVDPGRFARDLRYRQSA------------------------------------------------------------------------------------RDVLLLAREYPGTDLWDVAAAGARGLLGPGYATFRSKGLTAVSAAARAHSELRNGXXXXXXXXGLWGTLLEEG--------RGGQGALQLVRSVFMGSAVDGKDLSHVDLLLRLMAEASGRAGERRGGGGGSGSATGEVSRASPASGGKSGIDRRLSAHSGLVRRLLRSAPSGLDYKRLVGGDPLADPLADPRP-------------AAAGGEEESTPGVTAGNPQASRTVAGLAAARARAMSELRSVAGLEHAPALSKLATRIPGLTGSTVHLAVAQRVLCGETGGLSAEALGLLRVGVEGGGGASSNSLGDREGAEAASASVYDLLSPLLWRMVPEDLVEVTAAACAPLTASALGGGGGDGTGYYPYRAVSRTAIDTTAESGSISSRVMVPFPDRMRPLRLTIRCRRRILAEASAALGDTSGSGGDASVAAAVALALERLVRVGALVTALEAASSATQDGARVATQLESAWTSVGWG-GVHGSSGEKDVA--SRGAVEAAAAIAADAATGMALTGVPPVAVETVCSSMREALGITPDAATTRAVAKALGHAGGAASSSQRALELLDPARVYSNATSTGLECMVSSRDSEDRARALGRLRGLCAATATGPSVGTSFGTGRSSRSTSGEEDAAALVAAKAWRIILPALDRFCRAGEFRSSGNHGSGSGDESADGGTTPAPSVVLWARREVLTLLGSFG-AGDVLEAMTGDSAGTVDVXXXXXXXXXXXXXXXXXXGLSSPGDGSDSSARRM-SPT-SQLSVTFLRVAELAMEAFAARVSPEDVESWESRSSLL------------------------------------------------------ESLMG----------VMXXXXXXXXXXXSEMAAAGVTG----------------------------DVLMFMREWWPKVILAAAESREWGLISWCFVTGLCVAFTQEAFEEALSSTMEACGAPPLVCIKVGLGSLHLSRHRAAARLAAEAFSKHEEG-VSIMDEEALHLVLSSPCLPQLSKTPVYPSLVALTLRLKASNVSAQRPVSSPIPLTSTP-----------------------EFLLLAMACVGAHTRAAAIACETSGIHPGLRSLDGGLVVLGRRLREGGRRGGVSGAFGDG-GDEISGCLDPWMDMLRKRALDVFEADV 9914
G GE + G G+ P EAK ERR +AEDVLLSAA HFN+APSF+DGEELR +Q+WLDLLPWSSPAL+RER+LHDAG+LA+DLGA DLVPLQLRLRL G + +GS ++A GAM +++EVLR NP ++RD G G GG GE G GGLIRTPPGTGL+RLAGL+GLTSG + DRVRALVAR ALE GD AAC +LS AI RRPPR RR +GEE DGGT FAPELCEALDLVV WG G+ G AT A + +TA+LCAQALSRCP+SQIGRLL WSRFEA YLAG+ A GA G G S +++ L+ GMD A+AS+ R LV G A G S SS+ L R G AAEGALR+L LREH +L P A+ GD + + EE + E + D+ A A LCI LALA LR AA+EFG+GAVER VGYALAAADGR L ALRA LE AE V LRE++E +E +AA+ +PDESLVQ L +RG+S NRARRACVATRN+S EAA+AWCVEH+ DP MDAPF+ R G++ SK DGSSG G G RAA+R+ AAAALEAYV ARL+ + G+TG E V P+ EE+ EL AV+ SFRQRQSLG AEE+ R +LP VD GRFA D RYRQ R V+ LAREYP TD+W VAAA LLG GYA RSKG+ A +A R +ELRNG XXXXXXX RGGQ ALQ+VR VF+G+A G DL H+DLLLRLM+EAS R+G GG +G A G G K+ I+RRL+AH GL+RRLL++AP GLDYK L+G DPLAD A + + ST G RT AGLAAARARAM+E+RSVAGLEH LSKLA RIPG++ S V+LAVAQRVLCGETGGLS E + LLR GA G+ E AEA SASVY LLSPLL +M DLV++ AA CAP A GD GYYP R + A + A P +RM PLRLT+RCRRR+LA A+A + + SGS A A L + L+ AL+ + V +LE AW + G+SG + AV AAA +AAD M G PPVAV+ VCS+M+ ALG+ AT A A G A +A A ELL+P+ VY+ A + L +VS D DRA+AL LR +C ATG + R + V KAW ++ P L FCR G+ + G+ G SVVLWAR EVLTL+ SFG A X GL GDG+ RR+ SP +QLSV FLRVAELAMEAF R SPEDV+SW SRS+ L E L G V+ ++ A + G + REWWPK+I A ++REW + C V+ C AFT E FEEAL ST+EA GAPPL CIKVGL SLH SRH AA +L A S + G + +D LHL LSSP L QL+KT +YPSL A+ +R K S P+P EFLLLAMA G H RAAA+ACETSGIHPGLR+LDGGLVVLGRRLR GG GA G G GD G +P LR+RAL FE DV
Sbjct: 191 GGGEVGEDDGRAGS-PADDETEEAKRQERRSIAEDVLLSAATAHFNAAPSFEDGEELRWAQRWLDLLPWSSPALDRERSLHDAGRLAHDLGAVDLVPLQLRLRL----------GDRDSSSASGSVAAADGAMGVIQEVLRCNPDSFRD------GGGSALEEGGDGGWGGEGEGLFGAGKVGGLIRTPPGTGLMRLAGLLGLTSGEEIDRVRALVARAALEAGDGRAACDILSVAILRRPPRGRR---RGEE-----DGGTVVVPFAPELCEALDLVVEWGGSGAPRVGTAATGAPSPARTADLCAQALSRCPASQIGRLLRSWSRFEAVCYLAGAAAAATPTAYSGGAGVAEGAGRSPCDGXXXXXXAAVASVLVEGGMDERAAASVERSLVVGFQAGEGSGSDDSSSWLN------RRLGVGGGAAEGALRVLFLREHDSCLLSPFSRDAAGDGDGAATTETL----EEYAGSTEAAETAAMLDDSARREATSRLCILLALAELRLSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREAADEFGVGAVERAVGYALAAADGRAALGALRASLERAEEGVMGLREDSEAAXXXXXXXXXXXXXXXXXXXXXXXXXILEKAVVSAAVIIDPDESLVQALGKRGISSNRARRACVATRNASREAAIAWCVEHSADPAMDAPFISSRRAPPAPTSGGSGRQASKIDGSSGSSG---------------GDGRMRAAMRSRDRAAAALEAYVHARLAVVN-----GNTGXXXXXXVEAVFPAVEEEMEELLAVITSFRQRQSLGLAEEKARGILPATVDLGRFAGDPRYRQKQQSRCSDGSMVMXXXXXXXXXXXXXXXXXXXXXXXXXXILETNLKVRGLRKRFRLEQAELERAATDAVASWAASSSTATGGGKDPRGVIALAREYPDTDVWRVAAAATTALLGRGYANLRSKGVAAPAAVTRVETELRNGGXXXXXXXXXXXXXXXXXXXXXXXXXRGGQDALQVVRDVFVGAA-GGDDLHHLDLLLRLMSEASARSGPS--GGAEAGGAIG--------GGAKNPIERRLNAHIGLMRRLLKAAPPGLDYKALIGDDPLADXXXXXXXGXXXXXXXXGNSSAPSSNDSTSTRSGAGGAAATQRTAAGLAAARARAMAEVRSVAGLEHVAVLSKLAARIPGMSVSAVYLAVAQRVLCGETGGLSPEDMDLLR-------GALITGSGEEEEAEALSASVYHLLSPLLPKMAAHDLVDLAAAVCAPHAA-------GDHRGYYPCRRTTAAATSSPA-----------PADNRMAPLRLTVRCRRRLLAAAAAVVAEGSGS------AEAXXXXXXTLAGLSGLLDALDVVAPREV----VGRELEMAWAASNRARSSDGNSGAETATLQQERAVSAAAGVAAD----MVAMGAPPVAVDAVCSAMQAALGVR---ATEEAWAATAGEA--SAKQGAAATELLNPSCVYTAAIAAILARLVSG-DQVDRAQALKALRRICTVAATGXXXX--XXSHRDAXXXXXXXXXXXAVNGKAWGVLAPRLGLFCREGDP----SLGASDGXXXXXXXXXXXXSVVLWARAEVLTLVRSFGGAXXXXXXXXXXXXXXXXXXEAVGGVTSDNQQYEESHGLVGDGDGA---GRRLPSPLPAQLSVPFLRVAELAMEAFGKRTSPEDVDSWVSRSAFLGLLVPAATSGAICGSRKKEDVPSAAGQEEPVAATQQLRLRRLEAIVDMLSIWESEELEGAAAACPPHGAVLLSAAEQVRRLRAKAAVKALVGPAFNDDAIPPDSLGEGEGNQSCPTAREGSITGLSREWWPKLISAGVDAREWEFVCRCLVSTGCAAFTSEGFEEALWSTLEALGAPPLACIKVGLASLHPSRHVAATKLLASELSASDSGPTASVDVSTLHLALSSPSLGQLAKTALYPSLAAVAMRCKLW--------SCPLPQQXXXXXXXXXXXXXXXXXXXXXXXXXMEFLLLAMASAGEHARAAALACETSGIHPGLRTLDGGLVVLGRRLRGGG------GALGTGAGDTGMGWFEPLAGALRERALRAFEEDV 2161
BLAST of mRNA_D-herbacea_F_contig111.962.1 vs. uniprot
Match: A0A6H5JMI9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMI9_9PHAE) HSP 1 Score: 296 bits (758), Expect = 9.560e-86 Identity = 194/378 (51.32%), Postives = 225/378 (59.52%), Query Frame = 1
Query: 646 LVLTFDAVLTIYSFLAVPSAIRANRGGLIASPVCQQRLSRWHASTGAMAFHAGTDTIAVAGPSGATRRGSSLSLTLWRVTGGATSPXXXXSSALPTGSGPSSLSVEGAAAGTGSTGPRVRRAGSAVAAAVGAVRLSELHSVALDGGSLVVPAPRVGLDRAPPGTVASLLPLVFPGLRAVAPPVQVVFSPSGERLAVLDLGGGVTVVEVSGDAAHSSPYGRRCASTADGRSWRKADSGPFSSVSSSSSPSSLPGAKGAPVF-------SAGTGADVPRVISIGWWSEVALGALSSAGELAFFAAPRHLPLLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGSLAAPRPPPLGPRCAVWFAGDGRRAAVCWPGAGG 1758
+VLT+DAVL +YSF +V + +++SP C+QRL RWHAST AMAFH TDT+AV GPSGA+ S LSLTLWRVTGGA XXXX GS R AG + A + +RL+ELH VAL+GGSLVVPAPR GLDRAPPGTV +LLPL FPGLRAVAPPVQVVF+PSG+RLAVLD+ GGV++VE S DAA +S GRRC S ADGRSW + GTGA VPR +S+GWWSE+ L A+SSAG+LAF AP PL G + PRPPPLGPRC+VWFAGDGRRAAVCWPGAGG
Sbjct: 1 MVLTYDAVLALYSF-SVEGGVGGEGSDVLSSPACEQRLGRWHASTCAMAFHGATDTVAVVGPSGASCPDSFLSLTLWRVTGGAVXXXXXXXXXXXXXXXXXXXXXGADLRARGS-----RLAGRSAAMPLPPLRLTELHFVALEGGSLVVPAPRAGLDRAPPGTVPALLPLFFPGLRAVAPPVQVVFNPSGDRLAVLDIAGGVSIVETSEDAAVASSLGRRCLS-ADGRSWHRVTGATAXXXXXXXXXXXXXXXXXXXXXXXXXRPSGGGTGAAVPRAVSVGWWSELTLAAMSSAGDLAFLDAP---PLEAGPATAATVEIAAAFRNSAGDR-----------GGVGGPRPPPLGPRCSVWFAGDGRRAAVCWPGAGG 357
BLAST of mRNA_D-herbacea_F_contig111.962.1 vs. uniprot
Match: A0A6H5JI52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI52_9PHAE) HSP 1 Score: 237 bits (604), Expect = 1.230e-62 Identity = 229/621 (36.88%), Postives = 284/621 (45.73%), Query Frame = 1
Query: 2017 DHMWVASQALGSIGLVDSEEAATALLQEGLRRCDLLLDARKESXXXXXXXXXXXX------ASDRPLPERKGDGWDFDDDLANDNDDGERHTAAIGTDQEEDARRGGSI---------------------GVCRGGXXXXXXXXXXXPKVLLLRSRLLVLQGLAETFCMAEGAQGRGFNVARLWDFLSLAR---RKGILAAGARVGGWEDEGWRRELLRQAILGFARKGEASAVGVLFERHPYETLPSRLQALSALPDTLDPMSYA---HLLPCCGGESIRQSPPPVPTRQQTVSRTSGLQPETGKNTTPPALFFRMKPEGEGGAASGAGDVEAFGSAAWKAPPGRWEAGEGTSALSLSSRSSSFTTTGVVTAAVRPRSGGNAVSRTAPVATAASSSGGMVKNPFKGVVEMSAREQADPSAMAAWYTGRARELDARGGQLLHALSLCELGVARVGVGEERGVVGGGGVGXXXXXXXGKELLRLENLARHLSSLVYAGTVKPWVSLASWQEMGLEEKLTAVLEGLSASTIADDVRAFARAS-------ASPSDLGESRDATAAAAGEAVRGIAA-----AETTVPSHLEGVLVRVLGRLVKAAPSAESMEACARVAKESRPE 3744
D WV +AL IGL +E AA+A+L EGLRRCD LL A XXXXXXXX A +RP GDGWDF DD +D D + A V G +V LR+RL+ L+ L +TF EG QG F+ L +FL +KG+ GA WE+ +RR+ LR++++GFARKGEASAVGVL ERHP ETLP+RL+AL T M+ A P GG+S + RQQ TG +T + +GG+ G + F A PG +A E +ATAA Q D +A+AAWY GRARELDAR GQL HA +LC G RV V G GG +L+RL+ L +HL+SLVYAG+V V+LA+W+ M LEE++ AVL S TIAD+VR+FA A+ A+ DL E + G A T VP LEGV+VRVLG LVKAAPSAE MEACA VAK SRPE
Sbjct: 33 DARWVVKEALAGIGLAATEPAASAILAEGLRRCDFLLPAHSRGWGSSXXXXXXXXXXXXXPAKERPTASG-GDGWDFADDADDDGDVRDAPRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAAVGLGSAGDEGDRDSEVRRLRARLMSLRYLLDTFLALEGEQGCAFDADGLREFLGRGAEGSKKGLGDGGAEETAWENFPYRRDALRRSLMGFARKGEASAVGVLMERHPLETLPARLEALRTEATTTMMMTMAVQARDAPFLGGQSGARVC--AGHRQQAACHRCSRD-VTGLSTANANGTAASSGKDDGGSI---GQKDVFCVDA----PGASDADE--------------------------------------IATAA-------------------ERQRDSAALAAWYAGRARELDARAGQLRHAATLCRFGARRVVVPSSGGWAGG--------DVTEGQLVRLDRLLQHLTSLVYAGSVSASVTLAAWESMDLEERMLAVLSASSVGTIADNVRSFASAAXXXXXXXANGDDLLERPPISENVRPRGQEGYEAPTSQAVSTAVPPRLEGVVVRVLGTLVKAAPSAERMEACAAVAKASRPE 577
BLAST of mRNA_D-herbacea_F_contig111.962.1 vs. uniprot
Match: T0QC83_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QC83_SAPDV) HSP 1 Score: 62.8 bits (151), Expect = 1.960e-5 Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 1
Query: 2584 QAILGFARKGEASAVGVLFERHPYETLPSRLQALSALPDTLDPMSYAHLLPC 2739
+ L A+ G +A+ +L ER+ YE LP RL LSALP TLDP+ YAHLLPC
Sbjct: 524 ETALALAKDGRVAALSMLLERYGYELLPDRLALLSALPLTLDPVEYAHLLPC 575 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig111.962.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig111.962.1 >prot_D-herbacea_F_contig111.962.1 ID=prot_D-herbacea_F_contig111.962.1|Name=mRNA_D-herbacea_F_contig111.962.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=1853bp MLRERLSRVRRTAEACCQKRGWGETEDRGGALGNRPIRRRCTEAKLMERRback to top mRNA from alignment at D-herbacea_F_contig111:752342..796475+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig111.962.1 ID=mRNA_D-herbacea_F_contig111.962.1|Name=mRNA_D-herbacea_F_contig111.962.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=44134bp|location=Sequence derived from alignment at D-herbacea_F_contig111:752342..796475+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig111:752342..796475+ >mRNA_D-herbacea_F_contig111.962.1 ID=mRNA_D-herbacea_F_contig111.962.1|Name=mRNA_D-herbacea_F_contig111.962.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=11118bp|location=Sequence derived from alignment at D-herbacea_F_contig111:752342..796475+ (Desmarestia herbacea DmunF female)back to top |