mRNA_D-herbacea_F_contig110.907.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig110.907.1 vs. uniprot
Match: A0A6H5K9U1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9U1_9PHAE) HSP 1 Score: 757 bits (1955), Expect = 1.100e-268 Identity = 420/586 (71.67%), Postives = 479/586 (81.74%), Query Frame = 3
Query: 114 TKMAPTRGGPCLP-------LALLLLLGEAGLSGASMASSM----------VELVDAGGKLASASDVASLLSGLGGKPMNVVGVLGSKGSGKSTLVNQAFGTAFPVGGPLGQGDTTGVSAATLEGILLLDCDGAEEGADPTAGNRGATAGQATAFSAALSDVLLVNLWRSDLGRSVASNVRTIKAVFCEKLQE---AG--------ESDPASR---TPVMVAVHDCDPGAEAGALETAVMEEMAAVWEEVDHPSGATLEDYFDVE---VLAIPHPRYHAVAYATAVEGLKAKLKAMEASTATAGFRDRVTKAWKAVRDADATIIPAKSELMSVYKVDAAYGEVMAKADGQLKAWRQVVGAGKVVSDFGERSTKLYTSSLKAFDTKTVRFSTTSTRGTKRGALVSLMETGIKELYARQLAMLCARAEKSYKKALVKLLDGDALNDDSEADVLRKTLFAFEADATALVPEVLKVGFEDEYEELEADLQDFSEKFSDSPAAQAKQIQTVDTKVKKPKGERSVGFGLGLVGMVRQQGYGNLQGFGGYRMGPHTAILGYANDGSLPDASLGGQ-RPPLLRLQPKLNVDIDL 1766
T+ P R P LAL LLLG AGL G + + +ELVDA GKLASAS++ SLLSG GGK MNVVGVLGSKGSGKSTL+NQAFGT+F VGGPL QG TGVSAAT +G+LLLDCDG EEGADPTA ++G TAGQATAFSAALSDV+L+NLWRSDLGRSVASNVRTIK +F EKLQE AG +S A+ TP++VAVHDCDPGA+ ALE AVMEEM AVW EVDHPSG TL++ FD++ VLAIPHPRYHAVAYATA+E LK KL+ MEASTATAGFRDRVT+AW+AVRDA A +IPAKSE++++YKVD+AYGEVM AD QLK+WRQ VGAG+VV DFGERSTKLY SS+KAFDTKTVRFST++TR TKR AL+S METGIKELYARQL+MLCARA KSYK AL+KLL D LN++SEA+VLR+TLF+FEADAT+LVP++ +GFEDEYEELEADLQ+FSEKF+DSPAAQAK++Q VD KV+KPKGERSVGFGLGLVGMVRQ+GYGNLQGF GYR GPHT +GYAND SLPDAS G + PLLRLQPKLNVDIDL
Sbjct: 7 TRREPRRAQPAAAVAPPPRLLALALLLGAAGLRGVNARGAATAAPVAGAPTMELVDASGKLASASEITSLLSGFGGKAMNVVGVLGSKGSGKSTLLNQAFGTSFSVGGPLSQGAPTGVSAATCDGVLLLDCDGLEEGADPTAISKGTTAGQATAFSAALSDVVLMNLWRSDLGRSVASNVRTIKTLFSEKLQEIAAAGLTGDLEEVDSSAAAAFRPTPLVVAVHDCDPGADTDALEWAVMEEMLAVWREVDHPSGTTLQECFDIQANIVLAIPHPRYHAVAYATAIEALKQKLQTMEASTATAGFRDRVTRAWQAVRDAGAIMIPAKSEMVALYKVDSAYGEVMGSADMQLKSWRQTVGAGRVVGDFGERSTKLYRSSVKAFDTKTVRFSTSATRATKRAALLSTMETGIKELYARQLSMLCARALKSYKAALLKLLQDDVLNEESEANVLRQTLFSFEADATSLVPDMFSLGFEDEYEELEADLQEFSEKFADSPAAQAKEVQKVDAKVQKPKGERSVGFGLGLVGMVRQEGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAGKVPLLRLQPKLNVDIDL 592
BLAST of mRNA_D-herbacea_F_contig110.907.1 vs. uniprot
Match: A0A835ZBA4_9STRA (RHD3a, RHD3/Sey1 family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBA4_9STRA) HSP 1 Score: 361 bits (926), Expect = 4.630e-114 Identity = 234/538 (43.49%), Postives = 330/538 (61.34%), Query Frame = 3
Query: 216 VELVDAGGKLASASDVASLLSGLGGKPMNVVGVLGSKGSGKSTLVNQAFGTAFPVGGPLGQGDTTGVSAATLEG---ILLLDCDGAEEGADPTAGNRGATAGQA--TAFSAALSDVLLVNLWRSDLGRSVASNVRTIKAVFCEKL---QEAGESDPASRTPVMVAVHDCDPGAEAGALETAVMEEMAAVWEEVDHPSGATLEDYFDVEVLAIPHPRYHAVAYATAVEGLKAKLKAMEASTATAGFRDRVTKAWKAVRDADATIIPAKSELMSVYKVDAAYGEVMAKADGQLKAWRQVVGAGKVVSDFGERSTKLYTSSLKAFDTKTVRFSTTSTRGTKRGALVSLMETGIKELYARQLAMLCARAEKSYKKALVKLLDGDALNDDSEADVLRKTLFAFEADATALVPEVLK-VGFEDEYEELEADLQDFSEKFSDSPAAQAKQIQTVDTKVKKP------------KGERSVGFGLGLVGMVRQQGYGNLQGFGGYRMGPHTAILGYANDGSLPDASLGGQRPPLLRLQPKLNVDIDL 1766
V LVD+ GKLA ++ SL + G + VV +G KGS K++L+N AFGTAF GD++ S+AT++G +++++CDG T G+A A SAA++DV++VN++RSDLGR+VA+NVR K+VF ++L QEA E A P++V VHDC+P +A A++ AV E A W+E+ P+ L + + V A+PHPRY AYA A ++A A +A + TA F R+ AW A R A A+SEL + Y ++A E A A+G L AWR V G+VV FG R+ L L+ +D T+ T R +R LV+L++ G++ L+ +Q+A+L A A +++K+ +V LL+ D L ++SEA +LR TLF FE+ A+ L+ + L + FE EYEELEADL D+ E+F DSPAAQ + + ++ +V K +G+RS+ GLGLVGMVR G GNLQ F GYR+GPHT LGYAND P+A G+ PPLLRLQPKLN+DIDL
Sbjct: 25 VTLVDSAGKLAPNRELISLAARTGERS-TVVASVGGKGSRKNSLLNNAFGTAFEAVDTFATGDSS--SSATVDGAQGVIVVNCDGVT------------TDGEAKLAALSAAVADVVVVNVYRSDLGRNVAANVRAFKSVFAQRLAAEQEAKEGT-AEPLPLIVVVHDCEPDVDADAIKEAVEAEAQAAWDELGGPA-TPLSVHVALSVAAVPHPRYAPDAYAAAAAAVRATCAA-DAGSTTASFAPRLGTAWTATRAAP-XXXXARSELAAAYAAESAGAEAAADAEGALSAWRAAVARGRVVGGFGARARALRARVLEGYDRATLSHGGTPLRAQRRAELVALVDGGVERLFRQQVALLSADALRAFKREMVALLNKDKLTEESEAGLLRSTLFDFESRASELLSDDLPDLTFEAEYEELEADLCDYGERFGDSPAAQTRALAKMEKQVSKAARDGDKPGKKGKEGKRSIVAGLGLVGMVRTGGLGNLQAFSGYRLGPHTVTLGYANDADTPEAMQDGEAPPLLRLQPKLNLDIDL 543
BLAST of mRNA_D-herbacea_F_contig110.907.1 vs. uniprot
Match: A0A7S2S911_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S911_9STRA) HSP 1 Score: 195 bits (496), Expect = 3.450e-51 Identity = 174/574 (30.31%), Postives = 284/574 (49.48%), Query Frame = 3
Query: 150 PLALLLLLGEAGLSGASMASSMVELVDAGGKLASASDVASLLSGLGGKP------MNVVGVLGSKGSGKSTLVNQAFGTAFPVGGPLGQGDTTGVSAATL--EGILLL--DCDGAEEGADPTAGNRGATAGQATAFSAALSDVLLVNLWRSDLGRSVASNVRTIKAVFCEKLQEAGESDPASRTPVMVAVHDCDPGAEAGALETAVMEEMAAVWEEVDHPSGA-------TLEDYFDVEVLAIPHPRYHAVAYATAVEGLKAKLKAMEASTATAGFRDRVT-------KAWKAVRDADATIIPAKSELMSVYKVDAAYGEVMAKADGQLKAWRQVVGAGKVVSDFGERSTKLYTSSLKAFDTKTVRFSTTSTRGTKRGALVSLMETGIKELYARQLAMLCARAEKSYKKALVKLLDG----DALNDDSEADVLRKTLFAFEADATALV-PEVL-KVGFEDEYEELEADLQDFSEKFSDSPAAQAKQIQTVDTKV----KKPKGERSVGFGLGLVGMVRQQGYGNLQGFGGYRMGPHTAILGYAND-GSLPDASLGGQRPPLLRLQPKLNVDIDL 1766
P+ +LL L G AS ++ + +VD G+L S+ SL + G ++V+ +G+ G G+ LVN+ F T+ L + A + +G+L+L DCD + + T + A A+L+DV+ +LW SD+GR V +N ++++ + Q+ ++ ++ + VH P + A + ++E+++ +W ++ + L+D V+ +P P+ A Y AV+ L+ KL A A T + T K WKA ++ A+ +P + ELM Y +D AY + A+A G L WR+ V G + DFG+ ++ L S+L FD+ T S S R +R L + + + ++ Q+ L + + ++ L+ LL+G A+ D++ +RK F F A LV P V G + E ++ L F + F +SP A+ ++ ++ KV K K RS+ GL L GM+RQ G GNLQGF GY MGPH+ +GY ND GSL G PLLRLQPK+++D+DL
Sbjct: 4 PVLVLLALALCGGVSASSKAAPIHVVDHSGQLKSS----SLRTATDGSEAADADKLSVLATIGAPGCGREALVNELFETSLEENNGLPGAGPKPLCTAAMGGQGVLVLSTDCDYRSDAS---------TRDRVLALEASLADVVTFHLWESDVGRRVPANEAALRSLLSLRAQQFRKNS--RKSLLAFVVHSAGPKTSSAASKV-LLEDLSLLWGDLAAEAALRGEEEPPALKDMLQVQCFTLP-PQRDAAGYTAAVDLLREKLVAGPALKGTFSKGVKATTAAEVADKIWKATGES-ASALPPRDELMGWYAIDRAYADAHAQAQGTLNGWRRSVEKGNRIGDFGDAASTLLESTLARFDSATEACSIGSRRKERRQELETTIGKDLDRMFQLQIGDLEKQTLRKFEGRLLSLLNGVKDAAAVPDEAGEAEVRKFAFDFGRHAARLVVPGVTGSEGAKSETDKFSETLTTFLQDFDESPPAKVLRLNRLERKVQRSRKAEKNPRSIVPGLHLSGMMRQIGVGNLQGFAGYTMGPHSVTMGYQNDRGSLES----GDTSPLLRLQPKIHLDVDL 555
BLAST of mRNA_D-herbacea_F_contig110.907.1 vs. uniprot
Match: A0A5J4YZC2_PORPP (Protein SEY1-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZC2_PORPP) HSP 1 Score: 193 bits (491), Expect = 1.610e-50 Identity = 148/515 (28.74%), Postives = 245/515 (47.57%), Query Frame = 3
Query: 285 GGKPMNVVGVLGSKGSGKSTLVNQAFGTAFPVGGPLGQGDTTGVSAATLEGILLLD-CDGAEEGADPTAGNRGATAGQATAFSAALSDVLLVNLWRSDLGRSVASNVRTIKAVFCEKLQEAGESDPASRTPVMVAVHDCDPGAEAGALETAVMEEMAAVWEEV---DHPSGATLEDYFDVEVLAIPHPRYHAVAYATAVEGLKAKL---KAMEASTATAGFRDRVT---------KAWKAVRDADAT-IIPAKSELMSVYKVDAAYGEVMAKADGQLKAWRQVVGAGKVVSDFGERSTKLYTSSLKAFDTKTVRFSTTSTRGTKRGALVSLMETGIKELYARQLAMLCARAEKSYKKALV-KLLDGDALNDDSEADVLRKTLFAFEADATALVPEVLKVGFEDEYEELEADLQDFSEKFSDSPAAQA---KQIQTVDTKVKKPKGERSVGFGLGLVGMVRQQGYGNLQGFGGYRMGPHTAILGYANDGSLPDASLGGQRPPLLRLQPKLNVDIDL 1766
G + + V VLG+ +GKS+L+N+ FG FPV L + + L D C + A R AT + ++ A L DV+L NLW +DLGR A + +K+VFCE Q S+ A RT ++ V D D ++ ++ E VW D S + FD+EV+A+PH ++ + AV GL+A+L +A + A + +V W V + +P + EL++ + + AY + M + Q+ W V G +++FG ++ L +SSL+AFD +T+ ++ ++ R K + M+ I+ L+ +Q+A+L + A +KK L+ D + E L + F A L+ +++ F EL + D++ ++++SP Q ++++ PK +R G+GL L G +R +GYGN Q G GPH ND + G + PL R+QP LN+D+DL
Sbjct: 40 GAEVVKCVAVLGASATGKSSLLNELFGCKFPVARRLATSSGAAPADMVRFALPLEDKCPHNQAMVVLDAPGRDATDVRVASYFAGLCDVILFNLWSTDLGRRDAGRLELLKSVFCESSQMNSPSE-AQRTCIVFVVRDNDDNVAESTIKDKLVAEAKRVWASANVSDEFSTLDMSSLFDIEVVALPHAKFRKEEFVGAVAGLRARLCDPQAPKGFICRAQYSKQVPIDSFANFAGTLWSTVESIELPGALPEQGELLASFYCNQAYSKHMKRVSKQIMQWITQVDRGMTIANFGAAASSLMSSSLEAFDAETIAYAESACRAQKHAEMSQFMQQNIRSLFNKQIALLQSAAMNDFKKRLIDSTSDSGEVPATDEQQALNQADAYFTKRAQELMVSAMRLNFNAARLELGNAMNDYATRYAESPGVQLLAMERMEQAQAGALPPK-QRGWGWGLSLTGAMRPRGYGNFQLLCGASKGPHVVNFSLCNDADAAEQE-GQGKVPLFRMQPTLNIDVDL 551
BLAST of mRNA_D-herbacea_F_contig110.907.1 vs. uniprot
Match: A0A7S3A2V0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A2V0_9RHOD) HSP 1 Score: 188 bits (478), Expect = 8.630e-49 Identity = 155/549 (28.23%), Postives = 268/549 (48.82%), Query Frame = 3
Query: 207 SSMVELVDAGGKLASASDVASLLSGLGG-----KPMNVVGVLGSKGSGKSTLVNQAFGTAFPVGGPLGQGD-TTGV----SAATLEGILLLDCDGAE-EGADPTAGNRGATAGQATAFSAALSDVLLVNLWRSDLGRSVASNVRTIKAVFCEKLQEAGESDPASRTPVMVAVHDCDPGAEAGALETAVMEEMAAVWEEVDHPSGAT---LEDYFDVEVLAIPHPRYHAVAYATAVEGLKAKLKAMEASTATAGFRDRVTK-------------AWKAVRDADATIIPAKSELMSVYKVDAAYGEVMAKADGQLKAWRQVVGAGKVVSDFGERSTKLYTSSLKAFDTKTVRFSTTSTRGTKRGALVSLMETGIKELYARQLAMLCARAEKSYKKALVK-LLDGDALNDDSEADVLRKTLFAFEADATALVPEVLKVGFEDEYEELEADLQDFSEKFSDSPAAQAKQIQTVDTKVKKP-KGERSVGFGLGLVGMVRQQGYGNLQGFGGYRMGPHTAILGYANDGSLPDASLGGQRPPLLRLQPKLNVDIDL 1766
S+ ++L+D+ G+ +S + + LGG + + +V LG KGSGKS+L+N FGT+F VG T G+ SA + + + ++D G++ GAD NR AT F+ SDVL+ +LW +D+GR A+ ++ VF E L+ GE RT +M VHD D G +++ + ++ ++W++ P+G+ + D FD+E +++PHPR+ Y + L+++ + S+ + +D TK W+ + P + +L++ Y+ D AY A A Q+ W+ V GKVV FG ++++L S + ++ T + + R K G L + +++ I L+ +Q+ +L + +K L+ ++ G N +V+ L +F A L + F E L+ L ++++F DSP Q +Q + + ++P + + + GL L G +R +G+GN Q GY GP ND + G PL RLQP L+ D+DL
Sbjct: 8 SAPLQLIDSRGEFSSRLE--EFTAALGGPDQADETLLIVSALGVKGSGKSSLLNDVFGTSFGVGKTFNASKGTKGIWIQASANSNKPLAVMDTQGSDGRGADMEKVNRIAT------FTLCFSDVLVFSLWYADIGRYEAAGYGLVRTVFQEYLKLFGEER--RRTMLMFVVHDHDDGTSIESVKQILETDLKSLWQQAMKPAGSESLQMGDLFDLEFVSLPHPRHRQTEYEKKIGELRSRF--CDESSPSYVLKDMFTKMVPINALHTYPAVTWRDLARGVEVENPTRRDLVAAYRCDVAYHTQYANASKQMNKWKAEVEGGKVVRGFGAQASQLIESRIDEYENATSMHANSQARAKKGGELNTFLKSSITSLFQKQMQLLQTLSLIQFKDLLLNSVVTGGGRNSTGSKEVV---LDSFSKKAEECSVAALHLSFHSYKETLKDTLTSYAQQFEDSPTVQLSAMQRYERRAQRPIRRQPNANIGLNLTGALRPRGFGNFQLVTGYSDGPLVMNFSVCNDADAAEQE-GQGSVPLFRLQPTLHYDLDL 540
BLAST of mRNA_D-herbacea_F_contig110.907.1 vs. uniprot
Match: M2WVB9_GALSU (GTP-binding protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WVB9_GALSU) HSP 1 Score: 188 bits (477), Expect = 3.090e-48 Identity = 145/524 (27.67%), Postives = 252/524 (48.09%), Query Frame = 3
Query: 303 VVGVLGSKGSGKSTLVNQAFGTAFPVGGPLGQGD----TTGVSAAT--LEG---ILLLDCDGAEEGADPTAGNRGATAGQATAFSAALSDVLLVNLWRSDLGRSVASNVRTIKAVFCEKLQEAGESDPASRTPVMVAVHDCDPGAEAGALETAVMEEMAAVWEEVDHPSG---ATLEDYFDVEVLAIPHPRYHAVAYATAVEGLKAKL-------------KAMEASTATAGFRDRVTKAWKAVRDADATI--------IPAKSELMSVYKVDAAYGEVMAKADGQLKAWRQVVGAGKVVSDFGERSTKLYTSSLKAFDTKTVRFSTTSTRGTKRGALVSLMETGIKELYARQLAMLCARAEKSYKKALVKLLDGD-ALNDDSEADVLRKTLFAFEADATALVPEVLKVGFEDEYEELEADLQDFSEKFSDSPAAQAKQIQTVDTKVKKPKG-ERSVGFGLGLVGMVRQQGYGNLQGFGGYRMGPHTAILGYANDGSLPDASLGGQRP-PLLRLQPKLNVDIDL 1766
V+ +G KG GK+T N FGT V PL + + T G A L G +LL+D +G + A N+ + + A+SDV+L ++W +DLGR A+ V E L+ P S+T ++ VHD D G+ L+ ++ +M +W+ V+ P+ A L ++FD++V+++PHPRY Y +V ++ + + F W + +DA IP++ EL++ Y+ D +Y + A + + W+ GK++ FG +++ LYT ++ +DT T +S+ R KR +L +L++ +K L+ +Q+A+L + +K L+ + + ++++ + +R+ F A LV L++ + E++ L + + KF DSP Q + +Q ++ +P +R V G+GL +R GYGNLQ Y GPH+ + ND + A GQ L R+QP L+ DID+
Sbjct: 78 VISAIGVKGCGKTTFFNHLFGTHLQVSSPLKRSEQEKGTKGAMMAVGQLSGSRHLLLIDTEGTDGRTSQAANNKRLE--RIVTLTVAVSDVILYHVWLADLGRFEAAGYGVFYTVLGEHLKIFQRDHP-SKTLILFVVHDHDDGSTLEHLKKLILTDMEHIWDNVEKPNDYKTAKLSEFFDIQVVSLPHPRYRREEYEGSVAAIRDRFLGHFRRSEDYFLKREYSKELPLESFATYAEVVWSELTRSDAESGSHVISSGIPSQRELLATYQCDLSYETQLQNAMEKCQRWQNDTSRGKLIDKFGHKASSLYTEAMDNYDTSTAPYSSFQVRAQKRHSLGNLLQNQLKSLFQKQIALLQQQGLNKFKDMLLSAVAANGSISEYDQHVAMRRVDDWFIKKAEELVVPSLRLHYRLYRLEMQNALNETASKFRDSPTVQMQAMQKLEKLASRPPPKQRGVVVGVGLNAAIRPSGYGNLQMLASYNKGPHSLNVSLVNDRDV--AQQEGQSDIALFRIQPTLHFDIDI 596
BLAST of mRNA_D-herbacea_F_contig110.907.1 vs. uniprot
Match: A0A2V3IRX1_9FLOR (Protein SEY1-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRX1_9FLOR) HSP 1 Score: 186 bits (472), Expect = 5.820e-48 Identity = 138/500 (27.60%), Postives = 247/500 (49.40%), Query Frame = 3
Query: 306 VGVLGSKGSGKSTLVNQAFGTAFPVGGPLGQGDTTG-VSAATLEGILLLDCDGAEEGADPTAGNRGATAGQATAFSAALSDVLLVNLWRSDLGRSVASNVRTIKAVFCEKLQEAGESDPASRTPVMVAVHDCDPGAEAGALETAVMEEMAAVWEEVDHPSGATLEDYFDVEVLAIPHPRYHAVAYATAVEGLKAKLK-----------AMEASTATAGFRDRVTKAWKAVRDADATIIPAKSELMSVYKVDAAYGEVMAKADGQLKAWRQVVGAGKVVSDFGERSTKLYTSSLKAFDTKTVRFSTTSTRGTKRGALVSLMETGIKELYARQLAMLCARAEKSYKKALVKLLDGDALNDDSEADVLRKTLFAFEADATALVPEVLKVGFEDEYEELEADLQDFSEKFSDSPAAQAKQIQTVDTKVKK-PKGERSVGFGLGLVGMVRQQGYGNLQGFGGYRMGPHTAILGYANDGSLPDASLGGQRPPLLRLQPKLNVDIDL 1766
+ +LGS+ SGKSTL N+ F TAF V P T G V+A + L+LD +G+D G+ A AT + AL+D L+ NLW +DLGR A+ ++ +F E ++ + +P +T ++ + D D + +L++ ++ ++ +W ++D +GA+L D F+ E +++PH R+ + + AV L + G + WK + +P K +L++ Y+ D AY + QL W V G + FG +++ L S+L +D T+ +++ R KR L S +++ ++ L+ +Q+ +L A + +KK L+ + ++ LR F +A +L+ +++ + +E++ L + E F++SP AQ + +Q ++ + ++ P +R + FGLG+ R +G+GN Q GY GPHT ND + GQ P R+QP +N +DL
Sbjct: 50 IALLGSRSSGKSTLANRLFDTAFDVVRPFSGRATQGCVAAVSASKQLILDT----QGSDGRDGHNEKVARVAT-LALALADALIFNLWAADLGRYEAAGYSLLRTIFMEHVR-IFQGEPV-KTLIVFVIRDHDDDSPLDSLKSILLNDIQTLWNDID-ANGASLSDLFNFEFVSLPHIRHRKLQFDQAVSELSQRFSDPNHPKFLLHPEYSRKIPVEGLYNYADVVWKDTDQDKSVELPGKKDLVAAYRCDVAYDSQQRPSLAQLNRWTSEVDRGNTIPAFGVKASNLLESALAKYDRDTLSHASSPIRAKKRSELQSSLQSRVRSLFNKQILLLQNAALQRFKKILLSKVTNPMYERETPI-ALRSVDEWFARNAESLLVPSMRLSYRSARQEVQNALATYGEGFANSPTAQLQAMQQMERQAQRAPPRQRHIEFGLGINAACRPRGFGNFQLITGYARGPHTMQFTLVNDKDAAEQEGQGQ-VPFFRIQPTINTTVDL 539
BLAST of mRNA_D-herbacea_F_contig110.907.1 vs. uniprot
Match: A0A0G4F860_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F860_VITBC) HSP 1 Score: 150 bits (378), Expect = 8.300e-35 Identity = 156/561 (27.81%), Postives = 257/561 (45.81%), Query Frame = 3
Query: 216 VELVDAGGKLASASDVASLLSGLGGKP-----MNVVGVLGSKGSGKSTLVNQAFGTAFPVGGPLGQGDTTGVSAATLEG--ILLLDCDGAEEGADPTAGNRGATAGQATAFSAALSDVLLVNLWRSDL--GRSVASNVRTI--KAVFCEKLQEAG-------ESDPASRTPVMVAVHDCDPGAEAGALETAVMEEMAAVWEEVDHPSGAT--LEDYFDVEVLAIPHPRYHAVAYATAVEGLKAKLK-AMEASTATAGFRDR-----VTKAWKAVRDA--DATIIPAKSELMSVYKVDAAYGEVMAKADGQLKAWRQVVGAGKVVSDFGERSTKLYTSSLKAFDTKTVRFSTTSTRGTKRGALVSLMETGIKELYARQLAMLCARAEKSYKKALVKLLDGD-ALNDDSEADVLRKTLFAFEADATALV----PEVLKVGFEDEYEELEADLQDFSEKFSDSPAAQAKQIQTVDTKV-----------KKPKGERSVGFGLGLVGMVRQQGYGNLQGFGGYRMGPHTAILGYANDGSLPDASLGGQRPPLLRLQPKLNVDIDL 1766
+EL+ + GK AS ++ L L + + V+ +G G K +NQ G+ L + +S A G ++LD T T GQ A + L V ++ +W+S++ G + S+V ++ K V E G E A ++ AV D + A + M+ ++ ++ P G + DV + +P +Y Y A+ L+ +K A + + ++ G R V W AVR+ +T P+ + L + + +M A L W++ V G V DFG R+ L TS+L +D T +S R +R + S +E +++L+ RQLA+L R+ K ++ LV L ++ + EA LR+ F F+ ++ L+ + LK ++ + L L+ ++ KF +S A+ + ++ ++ KK K ER+ G L L MVRQ G GNLQGF Y GP + I+GYAND P+A G++PP LRLQPK+++DIDL
Sbjct: 45 IELLSSTGKAASEREITQFLGELARQDTKEGNLPVIAAIGPGGRRKRAFLNQLCGSDLDASKFLPTAPSASLSGAPEIGNTAVVLDVSTLASLPADTDEEDKLTTGQMMALACPLWGVCVLPVWQSEVVDGGGLPSSVSSLLLKVVREEVRGRRGAGGGGRSEGRKAGPLKIIFAVQGGDGTLSSSDATKAFTKGMSDLFSALEKPPGLQGGMAGLVDVTAVVLPSSKYRPQEYQKALVELRQVVKGAADKAKSSRGVRGSQLPGTVGGMWAAVRERLDVSTDSPSVAVLAASAHATSTADLLMDAAKVTLSQWKRRVDRGTVTDDFGHRAHTLITSTLDQYDRNTQMDGLSSMRQRRRDEIRSTLEADVRDLFNRQLALLQRRSLKDLREKLVAALTPQGSVEANQEAAALRQVEFTFDESSSDLLVSCMADELKPAIDEAKKTLMDRLRAYAGKFPESNEAKVQARLRMEERMRPQQQQQRAGGKKAKRERAFGMRLALASMVRQDGNGNLQGFASYDAGPFSMIMGYANDRDTPEAMQNGEKPPFLRLQPKIHLDIDL 605
BLAST of mRNA_D-herbacea_F_contig110.907.1 vs. uniprot
Match: A0A7S1BNU3_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BNU3_9STRA) HSP 1 Score: 147 bits (371), Expect = 3.100e-34 Identity = 128/438 (29.22%), Postives = 210/438 (47.95%), Query Frame = 3
Query: 510 GQATAFSAALSDVLLVNLWRSDLGRSVASNV-RTIKAVFCEKLQEAGESDPASRTPVMVAVHDCDPGAEAGALETAVMEEMAAVWEEVDHPSGATLEDYFDVEVLAIPHPRYHAVAYATAVEGLKAK-LKAMEASTATAGFRDRVTKAWKAVRDADA-TIIPAKSELMSVYKVDAAYGEVMAKADGQLKAWRQVVGAGKVVSDFGERSTKLYTSSLKAFDTKTVRFSTTST---RGTKRGALVSLMETGIKELYARQLAMLCARA---------EKSYKKALVKLLDGDALNDDSEADVLRKTLFAFEADATALVPEVLKVGFEDEYEELEADLQDFSEKFSDSPAAQAKQIQTVDTKVKKPKG--ERSVGFGLGLVGMVRQQGYGNLQGFGGYRMGPHTAILGYANDGSLPDA--SLGGQRPPLLRLQPKLNVDIDL 1766
G A +A++S ++V + DL + + RT+ A+F + G S S+ ++VAV G+ G V + + ++WE + A L + +D+EV+ I + EGL + L+ S A+ + +++ A+ ++ T+ P+ + ++ +D AY A ++ A+R G VS FG+ +T L+T +L +D T+ + T R +R L +M GIKE + Q++ L A EK K ++ D E +R F F+ A+AL L + + + L + EKF DSP AQ ++I + K KP+ +R++ G+ LV M+R G+GN QGF GY +GPH I+G ND PD +LGG RPP +R+QPKL++DI L
Sbjct: 116 GVGAACAASVSGAVIVGVRSEDLSDLIETRYGRTLLAIF----RGCGSS---SKRKLVVAVV----GSSGGVDTEDVAKSVGSIWEVATGENAALLSEAYDLEVVEIEE--------GSGAEGLIDRILETTPPSLASTDVATSIIRSYAALSSSNLDTLTPSVASCVA--SIDDAYAASARNARAKITAFRSRTSRGLTVSGFGKSATDLFTKTLNNYDRATLSSAGTPAAPYRSERREELRKIMTRGIKECFVSQMSSLQKTALAKFNASLLEKDAKSPAAGSTKATEIDYDEERASIRTAAFKFDTAASALEVPSLALKKDRYVADTTTKLGEVLEKFPDSPEAQLRRIGRIKRKASKPRAPKQRAINAGVNLVAMIRPDGFGNFQGFAGYSLGPHGVIVGVHNDADAPDTINTLGGVRPPFVRIQPKLDLDISL 532
BLAST of mRNA_D-herbacea_F_contig110.907.1 vs. uniprot
Match: A0A7S2KED8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KED8_9STRA) HSP 1 Score: 129 bits (324), Expect = 1.220e-28 Identity = 106/358 (29.61%), Postives = 175/358 (48.88%), Query Frame = 3
Query: 726 ETAVMEEMAAVWEEVDHPSGAT--LEDYFDVEVLAIPHPRYHAVAYATAVEGLKAKLKAMEASTATAGFRDRVTKAWKAVRDADATIIPAK--SELMSVYKVDAAYGEVMAKADGQLKAWRQVVGAGKVVSDFGERSTKLYTSSLKAFDTKTVRFSTTST---RGTKRGALVSLMETGIKELYARQLAMLCARAEKSYKKALVKLLDG-DALNDDSEADVLRKTLFAFEADATALVPEVLKVGFEDEYEELEADLQDFSEKFSDSPAAQAKQIQTVDTKVKKPK-GERSVGFGLGLVGMVRQQGYGNLQGFGGYRMGPHTAILGYANDGSLPDA--SLGGQRPPLLRLQPKLNVDIDL 1766
E A+M+++ ++E +G L+D + VE+ A+ A A A EG A+ G +++A+ + A ++ A+ S ++ D +Y + A +L W+ V G +V FG ++ L ++ ++D T+ + T R R L + +E I+ L+ Q+ L K + +L+K + + ++ D A R FAF+ A L L + + + + L D FS+S +A+ K + + KK K +RS+ + LGLV M+R G+GNLQGF GY +GPH I+G+ ND P+ GG RPPLLR+QPKLN+DI+L
Sbjct: 77 EKALMKDVEGIFEASAAAAGVQTRLKDLYSVEIYAVSDYADTAKVQARAAEG------ALSFPVENVGMA--LSRAYGKISTAPTALVGAELPSVTTAMLLCDDSYASIYRSARAKLMPWKGRVERGLLVDKFGTLASSLLEKTMSSYDVDTISAAGTPAAEYRLNVRAKLEARVEDAIRTLFESQIINLEKSTLKKFNASLLKQKNNKNEIDFDDNAAAKRSAAFAFDTAAQDLEVPSLSLRRAQFSQIIASKLDDALTNFSESNSAKMKDMMQIQKNSKKSKPSQRSLDYSLGLVAMIRPDGFGNLQGFAGYDIGPHKMIVGFHNDADAPETINQFGGIRPPLLRVQPKLNLDIEL 426 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig110.907.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig110.907.1 >prot_D-herbacea_F_contig110.907.1 ID=prot_D-herbacea_F_contig110.907.1|Name=mRNA_D-herbacea_F_contig110.907.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=550bp MAPTRGGPCLPLALLLLLGEAGLSGASMASSMVELVDAGGKLASASDVASback to top mRNA from alignment at D-herbacea_F_contig110:473744..498083+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig110.907.1 ID=mRNA_D-herbacea_F_contig110.907.1|Name=mRNA_D-herbacea_F_contig110.907.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=24340bp|location=Sequence derived from alignment at D-herbacea_F_contig110:473744..498083+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig110:473744..498083+ >mRNA_D-herbacea_F_contig110.907.1 ID=mRNA_D-herbacea_F_contig110.907.1|Name=mRNA_D-herbacea_F_contig110.907.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=3300bp|location=Sequence derived from alignment at D-herbacea_F_contig110:473744..498083+ (Desmarestia herbacea DmunF female)back to top |