mRNA_D-herbacea_F_contig11.835.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig11.835.1
Unique NamemRNA_D-herbacea_F_contig11.835.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
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BLAST of mRNA_D-herbacea_F_contig11.835.1 vs. uniprot
Match: D8LQE4_ECTSI (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQE4_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 1.540e-92
Identity = 165/230 (71.74%), Postives = 185/230 (80.43%), Query Frame = 3 
Query:    3 AGEECFDMRPSQLASLQGRLRPFAEHPLVSLGVLKWVHAQVSKASFCATPSFLSYAPVFLKLCGQTADEHPPQRPESFEVLALMLNARTAPDTPQASKMKLKQQVLLRMADVMVKGYVLPVLSYIRQLAASSALDQPLVAFFIVKVVGVAAPRQLQEG-HAKRYSPVFLNAMADLMGLPRVRQALQGSQLSPKDRERLNSYARYCLRFQSKDLTPGALESIKQLQSGLER 689
            A  ECF+   SQLASLQGRLRPFAEHPLVSLGVLKWVHAQ S  SF +TPSFLSYAPVFLKLCGQ ADEHPPQRPE+FE+L LMLNARTAPDTP A+K KLKQ +LLRMA+++VKGY+LPV  Y+R+LAA   LD  L+ FF+VK+VGVA PR +  G +A  YSP FLNAMA LMG+PRVRQAL    L P DRER   YARYCL+FQ  DLTP ALE +KQLQ GLER
Sbjct:  904 AAGECFET--SQLASLQGRLRPFAEHPLVSLGVLKWVHAQASTESFVSTPSFLSYAPVFLKLCGQAADEHPPQRPEAFEILKLMLNARTAPDTPPAAKAKLKQHILLRMAELVVKGYMLPVFEYLRKLAAGPGLDPALIGFFMVKIVGVAIPRPVARGGNANSYSPAFLNAMAGLMGVPRVRQALIA--LRPVDRERFAGYARYCLKFQRDDLTPEALEWMKQLQIGLER 1129
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BLAST of mRNA_D-herbacea_F_contig11.835.1 vs. uniprot
Match: A0A6P4ZD76_BRABE (negative elongation factor D-like n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZD76_BRABE)

HSP 1 Score: 67.8 bits (164), Expect = 1.860e-8
Identity = 50/200 (25.00%), Postives = 94/200 (47.00%), Query Frame = 3 
Query:   15 CFDMRPSQLASLQGRLRPFAEHPLVSLGVLKWVHAQVSKASFCATPSFLSYAPVFLKLCGQTADEHPPQRPESFEVLALMLNARTAPDTPQASKMKLKQQVLLRMADVMVKGYVLPVLSYIRQLAASSALDQPLVAFFIVKVVGVAAPRQLQEGHAKRYSPVFLNAMADLMGLPRVRQALQGSQLSPKDRERLNSYARYC 614
            C   R   +A L G L      P+V++GVL+W+   VS+ S+        + P+ L L  + +  HP   P   + L  +L   T PD     +++LK+ +L RM  ++ +GYV+P++ YI+        D  L+  F+ +V+ + AP    E   + + P+  N            +A+ G+  +P + + ++ +  +C
Sbjct:  392 CCKERSEVVAEL-GTLYSCIRVPVVAMGVLRWIDWTVSEPSYFKL--LTDHTPIHLALLDEISTCHPLLHPHVLKFLIRLLET-TYPDLDVLVQLELKKTLLDRMVHLLSRGYVVPIIQYIKGCIDRGDTDISLIRHFVTEVIDIIAPPYSSE-FVQLFLPIIEN------------EAITGNLRTPDESDPVSDFIGHC 574
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BLAST of mRNA_D-herbacea_F_contig11.835.1 vs. uniprot
Match: V9KKN1_CALMI (Negative elongation factor D-like protein n=25 Tax=Gnathostomata TaxID=7776 RepID=V9KKN1_CALMI)

HSP 1 Score: 66.6 bits (161), Expect = 4.330e-8
Identity = 43/142 (30.28%), Postives = 75/142 (52.82%), Query Frame = 3 
Query:   33 SQLASLQGRLRPFAEHPLVSLGVLKWVHAQVSKASFCATPSFLSYAPVFLKLCGQTADEHPPQRPESFEVLALMLNARTAPDTPQASKMKLKQQVLLRMADVMVKGYVLPVLSYIRQLAASSALDQPLVAFFIVKVVGVAAP 458
            S+L +  G L      P+V++GVLKWV   VS+ S+    +   + PV L L  + +  H    P+  ++L  +     +       +++LK+ +L RM  ++ +GYVLPV+SY+R+       D  L+ +F+ +V+ V AP
Sbjct:  395 SELVAELGTLYQCIRFPVVAMGVLKWVDWTVSEPSYFQLQT--DHTPVHLALLDEISTCHQLLHPQVLQLLVKLFETEHS-QLDVMEQLELKKTLLDRMVHLLSRGYVLPVVSYMRKCLEKLDTDISLIRYFVTEVLDVIAP 533
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BLAST of mRNA_D-herbacea_F_contig11.835.1 vs. uniprot
Match: A0A4W3JDQ8_CALMI (Uncharacterized protein n=3 Tax=Gnathostomata TaxID=7776 RepID=A0A4W3JDQ8_CALMI)

HSP 1 Score: 66.6 bits (161), Expect = 4.470e-8
Identity = 43/142 (30.28%), Postives = 75/142 (52.82%), Query Frame = 3 
Query:   33 SQLASLQGRLRPFAEHPLVSLGVLKWVHAQVSKASFCATPSFLSYAPVFLKLCGQTADEHPPQRPESFEVLALMLNARTAPDTPQASKMKLKQQVLLRMADVMVKGYVLPVLSYIRQLAASSALDQPLVAFFIVKVVGVAAP 458
            S+L +  G L      P+V++GVLKWV   VS+ S+    +   + PV L L  + +  H    P+  ++L  +     +       +++LK+ +L RM  ++ +GYVLPV+SY+R+       D  L+ +F+ +V+ V AP
Sbjct:  432 SELVAELGTLYQCIRFPVVAMGVLKWVDWTVSEPSYFQLQT--DHTPVHLALLDEISTCHQLLHPQVLQLLVKLFETEHS-QLDVMEQLELKKTLLDRMVHLLSRGYVLPVVSYMRKCLEKLDTDISLIRYFVTEVLDVIAP 570
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BLAST of mRNA_D-herbacea_F_contig11.835.1 vs. uniprot
Match: T1EMI2_HELRO (Uncharacterized protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1EMI2_HELRO)

HSP 1 Score: 66.2 bits (160), Expect = 5.500e-8
Identity = 41/144 (28.47%), Postives = 75/144 (52.08%), Query Frame = 3 
Query:   81 PLVSLGVLKWVHAQVSKASFCATPSFLSYAPVFLKLCGQTADEHPPQRPESFEVLALMLNARTAPDTPQASKMKLKQQVLLRMADVMVKGYVLPVLSYIRQLAASSALDQPLVAFFIVKVVGVAAPRQLQEGHAKRYSPVFLNA 512
            P+VS+G++KW++A ++K  +  T +   + P+ L L  + A  HP      F++L  +   + A D     ++ LK+ +L R+  ++  GYVLPV+S+I      +  D  L+  F+ +++ + AP          YSP F+ A
Sbjct:  388 PVVSMGIIKWIYATLTKPGYFLTNT--EHTPLHLILLDEIATNHPLLHKNIFQLLVQLFEFQFA-DIDDIFRLNLKKTILDRLVHLISCGYVLPVISFIHDCWKGANTDVSLIRHFVTELLDMIAPP---------YSPEFVQA 519
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BLAST of mRNA_D-herbacea_F_contig11.835.1 vs. uniprot
Match: G5AKZ4_HETGA (Negative elongation factor D n=8 Tax=Amniota TaxID=32524 RepID=G5AKZ4_HETGA)

HSP 1 Score: 65.1 bits (157), Expect = 1.430e-7
Identity = 43/142 (30.28%), Postives = 73/142 (51.41%), Query Frame = 3 
Query:   33 SQLASLQGRLRPFAEHPLVSLGVLKWVHAQVSKASFCATPSFLSYAPVFLKLCGQTADEHPPQRPESFEVLALMLNARTAPDTPQASKMKLKQQVLLRMADVMVKGYVLPVLSYIRQLAASSALDQPLVAFFIVKVVGVAAP 458
            S+L +    L      P+V++GVLKWV   VS+  +    +   + PV L L  + +  H    P+  ++L  +     +       +++LK+ +L RM  ++ +GYVLPV+SYIRQ       D  L+ +F+ +V+ V AP
Sbjct:  464 SELVAELSTLYQCIRFPVVAMGVLKWVDWTVSEPRYFQLQT--DHTPVHLALLDEISTCHQLLHPQVLQLLVKLFETEHS-QLDVMEQLELKKTLLDRMVHLLSRGYVLPVVSYIRQCLEELDTDISLIRYFVTEVLDVIAP 602
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BLAST of mRNA_D-herbacea_F_contig11.835.1 vs. uniprot
Match: A0A8C5FQB8_GADMO (Uncharacterized protein n=3 Tax=Euteleosteomorpha TaxID=1489388 RepID=A0A8C5FQB8_GADMO)

HSP 1 Score: 64.7 bits (156), Expect = 1.710e-7
Identity = 45/145 (31.03%), Postives = 76/145 (52.41%), Query Frame = 3 
Query:   24 MRPSQLASLQGRLRPFAEHPLVSLGVLKWVHAQVSKASFCATPSFLSYAPVFLKLCGQTADEHPPQRPESFEVLALMLNARTAPDTPQASKMKLKQQVLLRMADVMVKGYVLPVLSYIRQLAASSALDQPLVAFFIVKVVGVAAP 458
            +R ++ ASL G L  F   P+V++GVLKWV   VS+  +    +   + PV L L  +    H    P+  ++L  +     +       +++LK+ +L RM  ++ +GYVLPV+ YIR+       D  L+ +F+ +V+ V AP
Sbjct:  369 VRGTKEASLSGCLLRF---PVVAMGVLKWVDWTVSEPRYFQLQT--DHTPVHLALLDEICTCHQLLHPQVLQLLVKLFETEHS-QLDVMEQLELKKTLLDRMVHLLSRGYVLPVVGYIRRCLEKLNTDISLIRYFVTEVLDVIAP 507
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BLAST of mRNA_D-herbacea_F_contig11.835.1 vs. uniprot
Match: UPI00140248D8 (negative elongation factor C/D isoform X3 n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI00140248D8)

HSP 1 Score: 64.7 bits (156), Expect = 1.770e-7
Identity = 42/141 (29.79%), Postives = 75/141 (53.19%), Query Frame = 3 
Query:   33 SQLASLQGRLRPFAEHPLVSLGVLKWVHAQVSKASFCATPSFLSYAPVFLKLCGQTADEHPPQRPESFEVLALMLNARTAPDTPQASKMKLKQQVLLRMADVMVKGYVLPVLSYIRQLAASSALDQPLVAFFIVKVVGVAA 455
            S+L +  G L      P+V++GVLKWV   VS++S+    +   + PV L L  + +  H    P+  ++L  +     +       +++LK+ +L RM  ++ +GYVLPV+SY+R+       D  L+ +F+ +V+ V A
Sbjct:  397 SELVAELGTLYQCIRFPVVAMGVLKWVDWTVSESSYFQLQT--DHTPVHLALLDEISTCHQLLHPQVLQLLVKLFETEHS-QLDVMEQLELKKTLLDRMVHLLSRGYVLPVVSYMRKCLEKLNTDISLIRYFVTEVLDVIA 534
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BLAST of mRNA_D-herbacea_F_contig11.835.1 vs. uniprot
Match: A0A3Q3AWZ4_KRYMA (Negative elongation factor complex member C/D n=2 Tax=Kryptolebias marmoratus TaxID=37003 RepID=A0A3Q3AWZ4_KRYMA)

HSP 1 Score: 64.3 bits (155), Expect = 2.340e-7
Identity = 42/142 (29.58%), Postives = 73/142 (51.41%), Query Frame = 3 
Query:   33 SQLASLQGRLRPFAEHPLVSLGVLKWVHAQVSKASFCATPSFLSYAPVFLKLCGQTADEHPPQRPESFEVLALMLNARTAPDTPQASKMKLKQQVLLRMADVMVKGYVLPVLSYIRQLAASSALDQPLVAFFIVKVVGVAAP 458
            ++L +  G L      P+V++GVLKWV   VS+  +    +   + PV L L  +    H    P+  ++L  +     +       +++LK+ +L RM  ++ +GYVLPV+SYIR+       D  L+ +F+ +V+ V AP
Sbjct:  394 TELVAELGTLYQCIRFPVVAMGVLKWVDWTVSEPRYFQLQT--DHTPVHLALLDEICTCHQLLHPQVLQLLVKLFETEHS-QLDVMEQLELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLNTDISLIRYFVTEVLDVIAP 532
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BLAST of mRNA_D-herbacea_F_contig11.835.1 vs. uniprot
Match: A0A3B3UKA0_9TELE (Negative elongation factor complex member C/D n=1 Tax=Poecilia latipinna TaxID=48699 RepID=A0A3B3UKA0_9TELE)

HSP 1 Score: 63.9 bits (154), Expect = 3.080e-7
Identity = 42/142 (29.58%), Postives = 73/142 (51.41%), Query Frame = 3 
Query:   33 SQLASLQGRLRPFAEHPLVSLGVLKWVHAQVSKASFCATPSFLSYAPVFLKLCGQTADEHPPQRPESFEVLALMLNARTAPDTPQASKMKLKQQVLLRMADVMVKGYVLPVLSYIRQLAASSALDQPLVAFFIVKVVGVAAP 458
            ++L +  G L      P+V++GVLKWV   VS+  +    +   + PV L L  +    H    P+  ++L  +     +       +++LK+ +L RM  ++ +GYVLPV+SYIR+       D  L+ +F+ +V+ V AP
Sbjct:  357 TELVAELGTLYQCIRFPVVAMGVLKWVDWTVSEPRYFQLQT--DHTPVHLALLDEICTCHQLLHPQVLQLLIKLFETEHS-QLDVMEQLELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLNTDISLIRYFVTEVLDVIAP 495
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig11.835.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQE4_ECTSI1.540e-9271.74WW domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A6P4ZD76_BRABE1.860e-825.00negative elongation factor D-like n=3 Tax=Branchio... [more]
V9KKN1_CALMI4.330e-830.28Negative elongation factor D-like protein n=25 Tax... [more]
A0A4W3JDQ8_CALMI4.470e-830.28Uncharacterized protein n=3 Tax=Gnathostomata TaxI... [more]
T1EMI2_HELRO5.500e-828.47Uncharacterized protein n=1 Tax=Helobdella robusta... [more]
G5AKZ4_HETGA1.430e-730.28Negative elongation factor D n=8 Tax=Amniota TaxID... [more]
A0A8C5FQB8_GADMO1.710e-731.03Uncharacterized protein n=3 Tax=Euteleosteomorpha ... [more]
UPI00140248D81.770e-729.79negative elongation factor C/D isoform X3 n=1 Tax=... [more]
A0A3Q3AWZ4_KRYMA2.340e-729.58Negative elongation factor complex member C/D n=2 ... [more]
A0A3B3UKA0_9TELE3.080e-729.58Negative elongation factor complex member C/D n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig11contigD-herbacea_F_contig11:742420..749712 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score310.1
Seed ortholog evalue8.6e-82
Seed eggNOG ortholog2880.D8LQE4
Preferred nameWAC
KEGG koko:K15181
Hectar predicted targeting categoryother localisation
GOsGO:0000075,GO:0000077,GO:0000323,GO:0000993,GO:0001098,GO:0001099,GO:0003008,GO:0003674,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005737,GO:0005764,GO:0005773,GO:0006325,GO:0006355,GO:0006464,GO:0006513,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007610,GO:0007611,GO:0007612,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009966,GO:0009967,GO:0009987,GO:0010390,GO:0010468,GO:0010506,GO:0010507,GO:0010508,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010628,GO:0010646,GO:0010647,GO:0016043,GO:0016239,GO:0016241,GO:0016567,GO:0016569,GO:0016570,GO:0016574,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0023051,GO:0023056,GO:0030162,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031331,GO:0031570,GO:0031974,GO:0031981,GO:0032006,GO:0032008,GO:0032268,GO:0032269,GO:0032434,GO:0032435,GO:0032446,GO:0032501,GO:0032991,GO:0033523,GO:0033554,GO:0036211,GO:0042176,GO:0042177,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044783,GO:0044877,GO:0045786,GO:0045861,GO:0045893,GO:0045935,GO:0046958,GO:0046959,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050877,GO:0050890,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051248,GO:0051252,GO:0051254,GO:0051276,GO:0051716,GO:0051726,GO:0060255,GO:0061136,GO:0065007,GO:0070013,GO:0070063,GO:0070647,GO:0071704,GO:0071840,GO:0071894,GO:0080090,GO:1901564,GO:1901799,GO:1902531,GO:1902533,GO:1902680,GO:1903050,GO:1903051,GO:1903362,GO:1903363,GO:1903432,GO:1903506,GO:1903508,GO:1904263,GO:1990904,GO:2000058,GO:2000059,GO:2000112,GO:2001141
EggNOG free text desc.mRNA splicing, via spliceosome
EggNOG OGsCOG5104@1,KOG0152@2759
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03021
Exons5
Model size1334
Cds size672
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927505.308781-UTR-D-herbacea_F_contig11:742419..7424421622927505.308781-UTR-D-herbacea_F_contig11:742419..742442Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig11 742420..742442 +
1690790205.958876-UTR-D-herbacea_F_contig11:742419..7424421690790205.958876-UTR-D-herbacea_F_contig11:742419..742442Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig11 742420..742442 +
1622927505.374111-UTR-D-herbacea_F_contig11:749073..7497121622927505.374111-UTR-D-herbacea_F_contig11:749073..749712Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig11 749074..749712 +
1690790206.017815-UTR-D-herbacea_F_contig11:749073..7497121690790206.017815-UTR-D-herbacea_F_contig11:749073..749712Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig11 749074..749712 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927505.322732-CDS-D-herbacea_F_contig11:742442..7426581622927505.322732-CDS-D-herbacea_F_contig11:742442..742658Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig11 742443..742658 +
1690790205.971748-CDS-D-herbacea_F_contig11:742442..7426581690790205.971748-CDS-D-herbacea_F_contig11:742442..742658Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig11 742443..742658 +
1622927505.332781-CDS-D-herbacea_F_contig11:743123..7432321622927505.332781-CDS-D-herbacea_F_contig11:743123..743232Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig11 743124..743232 +
1690790205.9815516-CDS-D-herbacea_F_contig11:743123..7432321690790205.9815516-CDS-D-herbacea_F_contig11:743123..743232Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig11 743124..743232 +
1622927505.3436048-CDS-D-herbacea_F_contig11:744795..7449111622927505.3436048-CDS-D-herbacea_F_contig11:744795..744911Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig11 744796..744911 +
1690790205.9900663-CDS-D-herbacea_F_contig11:744795..7449111690790205.9900663-CDS-D-herbacea_F_contig11:744795..744911Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig11 744796..744911 +
1622927505.3533149-CDS-D-herbacea_F_contig11:746163..7463461622927505.3533149-CDS-D-herbacea_F_contig11:746163..746346Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig11 746164..746346 +
1690790205.9985025-CDS-D-herbacea_F_contig11:746163..7463461690790205.9985025-CDS-D-herbacea_F_contig11:746163..746346Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig11 746164..746346 +
1622927505.3629339-CDS-D-herbacea_F_contig11:749025..7490731622927505.3629339-CDS-D-herbacea_F_contig11:749025..749073Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig11 749026..749073 +
1690790206.007533-CDS-D-herbacea_F_contig11:749025..7490731690790206.007533-CDS-D-herbacea_F_contig11:749025..749073Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig11 749026..749073 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig11.835.1prot_D-herbacea_F_contig11.835.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig11 742443..749073 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig11.835.1

>prot_D-herbacea_F_contig11.835.1 ID=prot_D-herbacea_F_contig11.835.1|Name=mRNA_D-herbacea_F_contig11.835.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=224bp
MRPSQLASLQGRLRPFAEHPLVSLGVLKWVHAQVSKASFCATPSFLSYAP
VFLKLCGQTADEHPPQRPESFEVLALMLNARTAPDTPQASKMKLKQQVLL
RMADVMVKGYVLPVLSYIRQLAASSALDQPLVAFFIVKVVGVAAPRQLQE
GHAKRYSPVFLNAMADLMGLPRVRQALQGSQLSPKDRERLNSYARYCLRF
QSKDLTPGALESIKQLQSGLERQ*
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mRNA from alignment at D-herbacea_F_contig11:742420..749712+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig11.835.1 ID=mRNA_D-herbacea_F_contig11.835.1|Name=mRNA_D-herbacea_F_contig11.835.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=7293bp|location=Sequence derived from alignment at D-herbacea_F_contig11:742420..749712+ (Desmarestia herbacea DmunF female)
AGGCCGGAGAAGAATGCTTCGACATGCGGCCGTCGCAGCTGGCCTCTTTG
CAGGGTCGCCTTCGGCCCTTCGCGGAACACCCCTTGGTTAGCCTGGGCGT
GTTGAAGTGGGTTCACGCGCAGGTTAGCAAGGCGTCTTTCTGTGCCACCC
CAAGCTTTTTGTCCTACGCTCCGGTGTTTCTGAAGCTGTGCGGCCAAACA
GCGGACGAGCACCCCCCTCAACGACCCGAATCCTTCGAGGTAAATCCTTA
GTGTAGGGTCAGGGTTATGTTTAGGGTCGGGTCGGGTCGGGTCGGGTCGG
GTCGGGTCGGGTCGGGTCGGGTCGGGTTGGCTTGGGTTGGCTTGGGTTGG
GTTGGCTTGGGTTGAGTGGGGTCGGGTTGGGTTGCCTTGGCTTACTTGGA
TTGGCTTGAGTTGAGTTGGGTAAGGTTGTGCTGGGTCGGGTCGGGTCGGG
TCGGGTCGGTCAGGTTGTCACCGAACGAACAATCAACAAAGTATCGGTGT
CAACCACATTACTTGGAATATATACAGGCAATACCATGTAGTCGTCGACA
TATATATCGTTGTATTCGCACTCCTCGTGGAACAATACATAGCTTGTATT
ACACAACAACAAACAACAGCATCATACACGATTCAAGGTTACCGCTGCTT
GGAATGCGTCCATCGCTCTCCGACCCCCACCCGCTCCCAACGCCCGCCTC
CCAGGTTTTGGCACTGATGCTGAACGCACGCACGGCTCCGGACACGCCTC
AGGCCTCGAAGATGAAGCTGAAGCAGCAAGTATTGCTTCGCATGGCAGAC
GTCATGGTCAAGGGTATGTCTTGGTTTGCTTCCTTTAGTTGGTGGTTATG
TACTCGTTGTTGGACGCATTGTTTTTTATCAGACGGTTGGCGAGATTTTT
TCTCGGCCTTGCATCATGGTGTCTCCTAAGAGGAAATTAAAATAAGCATT
TATTATTATTGAGTAGATCGTCAATACACGGGACTCTGTAACTCCCAATC
AGGTACTTCTTTTTTTTTTATCCCGAATTTTTTTTTTTTTTCAATTTTCG
ATTTGGTGTTATTTATTATGTCGCCTGTGACCACGGAATTTTCTTATCTC
TCTAGGATGGAAGAATCAGTACAGACTCTGAGTACGTTTCTACAGCTGGA
TGTCGTAGGGTAGGAAGCACGATTTTTAATGCGAAGACAACAACAACAAC
AACAACAACAATAACAACAGCTGTAGTCGACGGGGACTTGTCATTACGTT
GTACTTGGCCGTGCCTGGGTTCTGTAGAGATATTTTGTCCTATTATACGC
GATGGGGTATATCCTGCTGGGTAAGAGGATGCAATATGTTTTATGTTCTT
GTGCCTGCCGTGCGTTTGTATATATAACGCACACACCTGTAGCTATTTTT
TTTTCGTTTTTTTTTTCTGGGTTTGGAATCTGTTTTGGCATCATGCTACA
TTTTGTATGGAAGAGGAACTTTTTTGTTTCTTCTTGTTTTGTACGGAGTA
GTGACCACAGCCAGATGAAAGTTGTGTTAAGTCTCCGCGCTGTATTGTTG
ATGGGCATTGTATCGGATGGGCTTGGTGGTATGCTGTAGGTAGGTTTACT
TGGCGTCTTTGTTCTTGATGGAGTTCCGTCGGTAGATTGGTTCACCCGAC
GCCTATTGCTCTTGATGGGCTTCCGTCGGTAGGTTGTTTCATCCGATGCA
TGTTGCTCTTGATGGGCCTCCGTCGGTAGGTTCACCGGTCCGGCGCCTTT
GTTGTTACAGGGGTCAGTTGCGTGCCTTTTGTTGGTAAGAGATGCTACTG
TGCTGTTGCTAGTTGCATGGTGACTTTTGACTGATTTAGGCATCGGGGGC
GGTCATACAGCATCGATCGCACCAACGATCCCGCCCCCTGCGTTAGGTCG
GCCGGCGTATGAGGGTGACTGGGTGTAGCAAGAGTGCTACGGCGGGGGGG
GCACGCGGAAAACAGTCGCGAAGCCTGCTCCTTGTTGGTTTGGTGTTTGT
TTGCTTGCGGTTCATATAGTAAGCCGCGCAGATTCGTTTCCACTTGGTAT
GTTTGCTACATACTCTCGCGTCTTTTTGTATAGCGTGCGTGCAATTCACA
GTTTGTTTTGTCTCCTGCTGTGTGTGTGTATGCATATTCTCTCTGTCACT
CTCTTACGCTCTCCTGTCATCGAATAGCCAACAGGAGAGCGTTGACATAG
TCTAGGGTTACATCGGAAGCTATCATGGAGCCGAAACGGACCAGTGCTCG
ATGAGAGACATAGGCACATTGTGTTGTAGCCGCAAGGTATGTATCCTACA
TTGCCATGGTTGGTTCCTCTCGATGTTTCCCCCACACCATTGTGCCGGCG
CTCTCCGCCCGTAATCATGCCCGCAGGCTATGTGCTGCCGGTGCTATCTT
ATATAAGGCAACTGGCGGCGTCATCGGCTCTGGATCAGCCTCTCGTCGCG
TTTTTCATCGTCAAAGTTGTCGGGGTTGCCGCGCCTAGACAGGTAATACA
GACAGACAGGCATACACATATATATAATATAGAGCCTATATATATATATA
TATATATATTTTTTTTTTGTTCCCGTTTCATTTATTATCTTCGCTCTGTA
CTCGTACAAGTATTCTTTCTCTAGCTCCATCTCTCTTCGTAACTCAGATG
CGGGGTCACATAGTGGGCGCTCCTCCCGCCTTCCCACTGCGGTACGTGCC
TACGTTTTTATCGCGAGAAGAGTGCAGCACTTTCTTCCCTCGTCGACTTT
CATCGAATTGTGCTTGCTCATGCTCTTGCGTTTTCCGCGACGGAAGATGG
CACAGAAAAGTGCCACCGGGATATATATACTTCGTATATATGATGCAAAT
ACTAATATAATAACGTAGTGATACAATTGTTGATAGATGGTTATAATTGA
TTAATTAAGTACAGTATTTTTCACTTTGAAAGGAGAGAGTATTAAATTTT
CATTGATGATTTAATATGCAGTATATATATACTTCGAAGTATGTATATGA
TGCAAATACTAAAAATAACTTATTGACATAATTGTTCATATTGATAGATG
ATTATCAACTTTCAAAGGAGACGATTATTAATTGTCAATGATTTGTTTTT
CACGTTTTTGAAGGAGGCGATATGATACAAATGTGATCAAAAGCCGCGAG
GCACGCACGGCCGCCACAGGTTGTTCTGTCGCGCGCACGAGGTCGCCACC
TTATTGGTCAAAACAGACAGTGCAAAGTCGACGTTGAGCCTCTCGAAGCT
TCATACGCTGCTGCTGAAGTTAGCTAGCCGGTGTGCCCTGCCCACAGTAT
CTAGCCGCGGGGAAAGTCTTGGGACGGGCAGACGTCCACGCGTCGATATA
TAGTCCATTTGTCTTCCCCCATCTCCCTTTGACGCAATAGATAAAATAGC
CAGAAAACGATCGCTATCGTAGGAGATAGATGTCGACCACAAAAACCGAA
ACAGGAAAGGGGACAAGGCAAGCAAAAAGTTGTTTTTTGTATGATTATGT
CAAAAACATAAAAGAGCGCCCAAACAATGGTTGGAGGTGCCTCTTTTAGG
AGTAGGAACGGTGCCTCCGTCTCGAAAGGGATGCGTGGTCGATGGTAAAT
GACTAAGAATACAACGACCCCCCCCCCCCCCAACCAACGGCTACGGCGTA
CGCTAATGCGTGAGTACGTGCCCCCTTCCTACCCTGGCGTGCATGCGCGC
TCATCCCCCCCCCCCCCCCTCCCCCTCGAATCTATACTGGTTAGTTGCAA
GAGGGGCACGCGAAGAGATACTCCCCGGTTTTCCTAAACGCAATGGCGGA
CCTGATGGGGCTCCCTCGAGTGCGGCAAGCTCTACAGGGAAGTCAGCTAT
CGCCGAAAGATCGCGAGCGGTTAAACAGCTACGCTCGTTACTGTCTCAGG
TTCCAGAGCAAGGACCTAACCCCTGGGGTGAGTTTTCGGTTGTTTTTCCG
CGTCATGATTTTTTTTGTTTTGTAACAGGCGTTTGTTGTCATGTGGTGGC
AGGATACAGTACAGTAGTAGTGATCTACGGTTCTCTACAATTATGAGTGG
CGTTTTTGGTCGGCTAATTGTCTGCAGGGAATGGAGGGGGGAGGGACGGG
GGGGGGGGTTCTCTTAATAGTTTGTTTTGTCTTGGCCATAATATAATGCC
GTTGACAACACGGCCCTTTAGTGTGTGTGCGGGGGGGGTGTTCTTCCTAC
CGGAGTGATTGCCAATTACCAATCTCGCTTCTTTCTTTTCTGCCAGAGGT
GGCTCAAAAAGGGTTTCCCTGCTGTAACGCTGTATTGATCTCAGCTCTCA
CACCCACTACTACCGTGATACTATAATACATATACTCGTAGCGGGGGTCG
CTTGCTTTAACATGATCTACCCCTTGTTTCGTGTCCCCCCTTTAGCGGTT
TTAGTCGGTTATCCATGAGTCTCTCCAGTAGCACCACGGGGCGCAAATGC
TCTAGCTTAGTTTTCATGTGAGGCAGGGGTACCCCTCGGTGGGGCCGATA
TTTGATTGTGTGTTTCGTGCGCGCGCCTTAAGGCGCGGTTGCCTCTCTCG
GTGCATCCCGCTGGGGTCGTGGCCTTTGTGTTTCCCCGGAGGGTCGAGGG
GAAAGAGTTGAACTTTCGTAGCATTCCGCTCTATATACGTACTGCTGTAC
TTTAAACTGGTGAACCACGGGCGCTTGTGTGGTGGAAAGCTGCGTATTGT
TTACTACTGTAGACTGTCATATGACAAGTGAATGCAGCAACAAAAATCGA
GCATGATGGCTCCACGCGTATCTTTGACTCGCATCATAGGTACACAACTG
TCTACGGCAGTCGCACCTCAAAGCCAGTAGACTTTACAACGTGTTCACGG
GTTGGTTTTATCTTTTTTTTACTTGTTGTTAGTATGGTGTGGTCGTAAGG
TTAGGGTTAGGGTTAGATCTAGAATTTTTTACTTGCTGTTAGTATGGTGT
GTTCGTTAGGTTAGGGTTAAATCTAGAAAATTTTACTTATTGTTAGTATG
GTGTGGTCGTTAGGTTAGGGTTAAATCTAGAAAGTTTTACTTATTGTTAG
TATGGTGTGGTCGTTAGGTTATGGTTACGGTTAGATCTAGAAATTTTTAC
TTGCTGTTAGTATGGTGTGGTCGTTAGGTTTGGGTTAGGGTTAGATGTAG
AAAATTTTACTTATTGTTAGTATGGATGGTGTGGTCGTTAGGTTAGGGTT
ATAGGGTTAGATCTAGAACTTACTTATTGTTTGTATGTCGTGGTCGTTAG
GTTAGGGTTAGGGTTAGATGTAGAAATTTTTACTTGTTGTTAGTATGGTG
TGGTCGTTAGGTTAGGGTTGGGTCAGATCTAGAAAATGTTCCGAACTACT
GAACAGCCTACGTTGGTTTACTATAAACCTATATAGGATTTGTCCCAAAC
GCACCACAGCGCAGAGTTCAACCATGGATACTTGCCCCCGGATCTTCGCG
GAAAAAACAAAAAACCACACAAATACGAGTAACAAAAACGGCTTTACATC
TCAATGCAAATAACGCCCTTCCGTTTGCCCGGAACGGCACAACAAATCGT
AGCGAGATTCAAAAACGCACCAAATAAATGCGGCAATGTTACCTATACAA
ATAAAGCACCAGTTGACCGCACAAAACCGTGGAGTGCGAGAGTCACACTG
CACCCGAACCAACGTTTGATAGCTTGTGAGTTGGCTTTTGACCAGGCAAG
GACGATGTAGTTGGTTTGGGGTCATTACATCCCGAATCGCCGCAGAAGCA
ATGTTCTTTGTGACGGCGTCGTGAAGCAAAGAGTCACTTGAGCACATTTT
TGCTTGAAAAATTACGAGACAAGTTCTCGCGATAGGTATCACTCCTCCGA
TAGTGCATGGATTTTGCTCAAACGTGGCATGCCGGTTGCGGCTAATCATG
AGCTATCGTGCAATAGCTCGTATGTCTCCGTGGGCTGTCTATGGGCGTCG
CCGTGCGACGCAAGTGAAGGTACACCTCTCACAACAACTACTCTGAGCAC
CACACTTTCTGCTTTTTCTTCATTCTGGCAACTTGCTGTACAGTCCTGTT
TTGTTCCTCTTCGAAAATTGAACAGATATTGGAGGAAAATTCCAGGTACC
CGGTATGAGTTGATAAGAGCCGTCCACGCCAACATGGAAGGCTCCTACTG
GGGTAGAAGCCTCCAAGTGTGGTGGTAGCTTTAGCCCGCTACAGGAGGCA
GGTCCGAGTTCTTTGGTAGATATAGGCAAGGAGATTGCCCTTCGCTACAG
GAGATACGTGGCGGAAATATCCTCGGGTCCTATAATGGGCCGATGGATCT
TCCAGAAGTGCATGATTGACGATCCTTCTACATACCTTCTAGATAGTCTC
CTCCACAGTCCACCCAGACTGTTATTATACTACTACTTACTATTACTGAG
CCATGCACCTACGATGAAGTTTGTGTCTGTTGCCTCCTTGCGGATTTCCC
CTCACACCCTTGGCATGCGCCCTACAATCCTGCGAGCCTGCCGGGCAGTT
CACTGCCCGGTAGGCGCCTTGTACTATAGTATAATTGTAACGAACATCCT
GAAGATCGATCTAACAAATATAAGTCGTGTTACGCTGTTTTTTTTTTTTT
TACCAGGCTCTGGAGTCGATAAAGCAGCTGCAGAGCGGGCTGGAGCGGCA
GTAGTGGGAAAAACGCGGAACGCAACGGTTGAGCCGGGATAGTGTCTCGA
TGTACGGTATTGGCCCAGACCAGAAAGATCACCCGATTTTTTTCCAGGAG
TAGGCCGACCTCTAACTACTACTATTTTACTGTTCAAATATGTCGGTTGA
CGGATAATCGTCAAGCCGTCTAGGTCTTCTCTGCGTTTTATACTTGTTTT
AGTATAGGTCTTACTTGACTGACCGTCTGTCAAGGAGTAAGATTGCCGTC
AATCTAACATCTTTGCTACACTTATGTCGGTTGACGGACAATCGTCAAGC
TGTCAAGGTCTCCTCTTCGTTTTATACTAGTTTTAGTATAGGCCTTCCTT
GAGTGACCGTCGGTCTGTCAAAGGGTGGTCAGTCAAGGGGTAAGGTTGTC
GTCTAGCAACAGCTCTTTGCTACTACAGTGTGGCGTACTTTTTTGTTATA
CTCCTACAGTAGTTTTGGACAACACCCAATGGGTCGTTGCAATATATATA
TATACGAAGTACGTTGTCTCTTTCGCAATAATAATAGCAGCGGATGCTAT
TGAGTTCTCGTGAATACTACGAAGATTTCCACGTCATATTCCGGCGAACG
TATCAGCTCACCCGAACGAAGCTGTCACGTCGGTGGAGGGGGG
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Coding sequence (CDS) from alignment at D-herbacea_F_contig11:742420..749712+

>mRNA_D-herbacea_F_contig11.835.1 ID=mRNA_D-herbacea_F_contig11.835.1|Name=mRNA_D-herbacea_F_contig11.835.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1344bp|location=Sequence derived from alignment at D-herbacea_F_contig11:742420..749712+ (Desmarestia herbacea DmunF female)
ATGCGGCCGTCGCAGCTGGCCTCTTTGCAGGGTCGCCTTCGGCCCTTCGC
GGAACACCCCTTGGTTAGCCTGGGCGTGTTGAAGTGGGTTCACGCGCAGG
TTAGCAAGGCGTCTTTCTGTGCCACCCCAAGCTTTTTGTCCTACGCTCCG
GTGTTTCTGAAGCTGTGCGGCCAAACAGCGGACGAGCACCCCCCTCAACG
ACCCGAATCCTTCGAGATGCGGCCGTCGCAGCTGGCCTCTTTGCAGGGTC
GCCTTCGGCCCTTCGCGGAACACCCCTTGGTTAGCCTGGGCGTGTTGAAG
TGGGTTCACGCGCAGGTTAGCAAGGCGTCTTTCTGTGCCACCCCAAGCTT
TTTGTCCTACGCTCCGGTGTTTCTGAAGCTGTGCGGCCAAACAGCGGACG
AGCACCCCCCTCAACGACCCGAATCCTTCGAGGTTTTGGCACTGATGCTG
AACGCACGCACGGCTCCGGACACGCCTCAGGCCTCGAAGATGAAGCTGAA
GCAGCAAGTATTGCTTCGCATGGCAGACGTCATGGTCAAGGGTTTTGGCA
CTGATGCTGAACGCACGCACGGCTCCGGACACGCCTCAGGCCTCGAAGAT
GAAGCTGAAGCAGCAAGTATTGCTTCGCATGGCAGACGTCATGGTCAAGG
GCTATGTGCTGCCGGTGCTATCTTATATAAGGCAACTGGCGGCGTCATCG
GCTCTGGATCAGCCTCTCGTCGCGTTTTTCATCGTCAAAGTTGTCGGGGT
TGCCGCGCCTAGACAGGCTATGTGCTGCCGGTGCTATCTTATATAAGGCA
ACTGGCGGCGTCATCGGCTCTGGATCAGCCTCTCGTCGCGTTTTTCATCG
TCAAAGTTGTCGGGGTTGCCGCGCCTAGACAGTTGCAAGAGGGGCACGCG
AAGAGATACTCCCCGGTTTTCCTAAACGCAATGGCGGACCTGATGGGGCT
CCCTCGAGTGCGGCAAGCTCTACAGGGAAGTCAGCTATCGCCGAAAGATC
GCGAGCGGTTAAACAGCTACGCTCGTTACTGTCTCAGGTTCCAGAGCAAG
GACCTAACCCCTGGGTTGCAAGAGGGGCACGCGAAGAGATACTCCCCGGT
TTTCCTAAACGCAATGGCGGACCTGATGGGGCTCCCTCGAGTGCGGCAAG
CTCTACAGGGAAGTCAGCTATCGCCGAAAGATCGCGAGCGGTTAAACAGC
TACGCTCGTTACTGTCTCAGGTTCCAGAGCAAGGACCTAACCCCTGGGGC
TCTGGAGTCGATAAAGCAGCTGCAGAGCGGGCTGGAGCGGCAGTAGGCTC
TGGAGTCGATAAAGCAGCTGCAGAGCGGGCTGGAGCGGCAGTAG
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