mRNA_D-herbacea_F_contig109.785.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig109.785.1 vs. uniprot
Match: D7FUS3_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUS3_ECTSI) HSP 1 Score: 515 bits (1326), Expect = 3.390e-161 Identity = 346/854 (40.52%), Postives = 450/854 (52.69%), Query Frame = 3
Query: 507 ESNYEWESDGTEPDQSAQGKALAEEQAAVF-QRSDGIFAKVQNPHPRMIRVWVSVASWRLYEGLAPRAIEALGLDPKKGVQLMLVTDGLYMSSSVPPEVKWVQQLEDTDIGNDADFSARSRGETFPLQWMLRKRLEEMMFRQWHP----SPTDEYDDQEHGVPGKRMRREEDGEDCDSPAMQR---AIASICECANVSNELAQYAMRAAKCDQQ-AQLNLLDDGLRVGLQEAMVDDRLADIAELKSSFPSVPEVMRGARLDCGRTTTTGRRFLAFIDASQSSAELDLLRRMSKKSTHGAPRLRLLSCRCEE-IRGQAASVSDRGRASSTGARPTTTVHTGVLSDPFEMKPS-VKMSAWCGAGSGLEVAM------AEEERAERRGLLQDMSESNLLVRVALSVIKKLRSANSNCLVCDDPIRGYLPAVPIVCAKELCVMSSEDMGCGTDVESQVAMKGDTVDLLINMFWMAMRG-SRPELGFPDKV---GFFLFQKRTARPKMLEVSRIV-VVGTVVRLERDAWSKAKCSGQATTEYPSPPEPGLCRLSVGGDYITFGGGGGAKSTSSALKSRKKRGFCSVSLLNRDCIVAKPTCIRRKKEELAGGVSSVFPPSVPDTVGIPAAAHMEAS--------DGVGETEDGAPQTLRQALNDRHQLAYPLLRWLLSANRAHLRPLEADELIPEIRCEKQFMLVTGTAEREVKFQQLKREAAKR----GGTGSFYAFHGSKSENWHGILQLGLKNMSATQYMSSGASFGKGIYMADQMTVSLTYASRMSIGA----HWPMARTKEKTIIVAVCEVVDREGNTWLQQDSQSFVVPDEECVTTRYLLVNPTSKDVFASKIT 2954
ESNYE+E E S QGK LAE A F + SDG+FA+V+ P ++R+W+ V WRLYEGL R +EALGLDP KGV +ML TD Y S+ P V+W++Q+ + A S S G+TF LQWMLRKRLEE + + W P + +E + H G P M+ AI +IC+C VS ELA YA++ ++ D Q A NLLD+G R L+ + +DR A + ELK +F V E G +T + F A S + LL R ++ GAP+ R + + R S+ R R S G T G + S + W GA + +EE +RR LL+ +S+ NLL+RVA +VI KLR+AN+ CLVC+D I G+LPAVPIVC K+LCVMSSE+MGCGTDVESQV KG+TVDL I++FWMAM+ SR EL FP V F+ R + +V +++ V +V ++R +AK G A T + + AL R + + + L R A + + +LR+AL L+YPLLRWLLSANRAHLRPL E+IPEI CEKQFMLVTGTAERE KFQ +KR A R GTGSFYAFHGSK +NWHGIL +GL+NMS T+Y S GA++GKGIYMA+ + VSL YA S G HWP++ +IVAVCEV+D+E + +VVPDEECV TRYLL+NP D +KIT
Sbjct: 90 ESNYEYEVSDGEAGVSTQGKDLAEADAGAFVEESDGMFARVETPSTHLVRLWIGVKPWRLYEGLGSRTVEALGLDPLKGVMVMLTTDQYYTLSNKCPGVRWLRQVAPEKMHTAAKCSDGSVGDTFSLQWMLRKRLEEELKQNWPPRSRYADEEEAEGDPHRAGGXXXXXXXXXXGAGDPNMEATRLAIEAICDCTAVSAELAAYALQFSQFDSQLAHNNLLDEGTRASLEMTLAEDRAAAVVELKRTFERVEE---------GPSTCSATTFAARRRESCKDLRIRLLHRRGRRE--GAPQNRSSAAAGKSRARRSGTSIKLRARGSRRGGSSVATASEGXXXXAGGGRNSGEEKRGWEGAAGDSDSGFMPLDLTGDEEIDDRRALLEHLSDKNLLLRVAHAVIDKLRNANNRCLVCNDKIEGFLPAVPIVCQKDLCVMSSEEMGCGTDVESQVLRKGETVDLQIDLFWMAMKNESRSELAFPAAVQSGAALAFKNRDGTHDVEKVRKVLDVFPSVADMQRCIEWQAK-GGIAETSVANSSISSSXXXXXXXXXXXXXXXXXXXXXA-ALNPRTAQAKATATSLARKAATAXXXVFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESAWDKSVAQMLSLREALTKMDTLSYPLLRWLLSANRAHLRPLRGSEVIPEIPCEKQFMLVTGTAEREAKFQTMKRIAGSRRSGGSGTGSFYAFHGSKPDNWHGILHMGLRNMSGTKYQSYGAAYGKGIYMAEALGVSLKYAGMGSNGEGSGNHWPLSSIDGSAVIVAVCEVIDKE-ECRQAHGPKYYVVPDEECVATRYLLINPKLSDGVETKIT 929
BLAST of mRNA_D-herbacea_F_contig109.785.1 vs. uniprot
Match: A0A6H5JD35_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD35_9PHAE) HSP 1 Score: 379 bits (974), Expect = 4.850e-111 Identity = 329/985 (33.40%), Postives = 432/985 (43.86%), Query Frame = 3
Query: 414 LLADTEDHD-DCADGGVCPDITCSLSDNE-DDCESNYEWE---SDGTEPDQSAQGKALAEEQA-AVFQRSDGIFAKVQNPHPRMIRVWVSVASWRLYEGLAPRAIEALGLDPKKGVQLMLVTDGLYMSSSVPPEVKWVQQLEDTDIGNDADFSARSR-GETFPLQWMLRKRLEEMMFRQWHPSPTD-----EYDDQ-----------------------------------------------EHGV-PGKRMRREEDGEDCDSPAMQRAIASICECANVSNELAQYAMRAAKCDQ-QAQLNLLDDGLRVGLQEAMVDDRLADIAELKSSFPSVPEVMRGARLDCGRTTTTGRRFLAFIDASQSSAELDLLRRMSKKSTHGAPRLRLLSCRCEEIRGQAASVSDRGRASSTGARPTTTVHTGVLSDPFEMKPSVKMSAWCGAGSGLEVAMAEEERAERRGLLQDMSESNLLVRVALSVIKKLRSANSNCLVCDDPIRGYLPAVPIVCAKELCVMSSEDMGCGTDVESQVAMKGDTVDLLINMFWMAMRGSRPELGFPDKVGF---FLFQKRTARPKMLEVSRIV-VVGTVVRLERDAWSKA----------KCSGQATTEYPSPPEPGLCRLSVGGDYITFGGGGGAKSTSSALKSRKKRGFCSVSLLNRDCIVAKPTCIRRKKEELAGGVSSVFPP----------------------------------------SVPDTVGIPAAAHM-----------EASDGVGETEDGAPQTLRQALNDRHQLAYPLLRWLLSANRAHLRPLEADELIPEIRCEKQFMLVTGTAEREVKFQQLKREAA--KRGGTG--SFYAFHGSKSENWHGILQLGLKNMSATQYMSSGASFGKGIYMADQMTVSLTYASRM--SIGAHWPMARTK--EKTIIVAVCEVVDREGNTWLQQDSQSFVVPDEECVTTRYLLVNPTSK---DVFASKITI 2957
+++D E ++ D G PD + E D +S Y WE SDG E S +G LA+ A A+ +G+FAKV+ P +IR+WV V RL+EGLA RA+EALGLDP K V +M TD Y P+V+W +Q++ D D R GE FPLQ L ++L+E + WH + E DQ HG P E + DS A+Q AI SICE S EL Y + +K D+ +A L L DDGLR L++A LK +P E + +DA + + LR S + R EE E+ R L ++E+N L R AL+++KKLR+AN +CLVCD+PI G+LPAVPIVC KE C SE MGCGTDVESQV KG+TVDLLI++FWMAM R EL FP V +F+ + R + +V +++ + TV ++R K +G+ T +P P L A + + A VPD AAA + + +G T+ +L +AL +R+ LAY LLRWLLSANRAHLRPL ELIPEI C+KQF LVTGTAERE +FQ LKREAA RGGTG SFYAFHGS NWHGILQ GLKNMS +++MS+GA+ G GIYMA+Q++VSL YA + HWP A + +IVAVCEV+DRE +++ +VVPDEECV TR+LL+NP + + AS +TI
Sbjct: 1 MISDDEPYNGDGNSNGSMPDDDMEQQEEEASDYDSEYAWEEGQSDG-EVGSSTKGMDLAKADADALNVDVEGMFAKVEAHTPTLIRLWVCVEHSRLFEGLATRAVEALGLDPSKDVMVMFTTDQDYTGCR-RPKVQWARQVDPVKSKAD-DLCPEGRIGEIFPLQGTLCQKLDEDLTGMWHRAADRTRVRREISDQLRDGGGNXXXXXVRAGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGAAPSSGGSGGEAAAEPDSSAVQWAIESICETTGASRELVAYTLMVSKYDEHRAHLTLQDDGLRSSLEKAF-----GKFQRLKDKYPFADEAL-------------------LLDAVAAHPRSEGLRSNSVR-------------RSEE---------------------------------------------------------REDLDARMVKLGQLAEANPLARAALTIMKKLRNANKDCLVCDEPIEGFLPAVPIVCPKEFCRWRSEQMGCGTDVESQVLRKGETVDLLIDLFWMAMHSGRSELAFPATVQSGTDLVFKDPSGRNDVDKVQQVLRALPTVADMQRCIKRKRGEGEEREDXXPQAGETTMASATPAPPLLEDEEARQRRAATVANASANAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKRCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVAVGGDVPDAARFGAAAAVGGDSCFGGGVRQGGEGHDATDGSGMLSLEKALTERNPLAYRLLRWLLSANRAHLRPLREWELIPEIPCQKQFTLVTGTAEREARFQALKREAALLSRGGTGTGSFYAFHGSGPGNWHGILQEGLKNMSGSRWMSTGAAMGSGIYMANQLSVSLGYAGGRGGTCSGHWPNAERVGGQNPVIVAVCEVIDRESYKIRGRNAGYYVVPDEECVATRFLLINPRAGYGGGILASCLTI 888
BLAST of mRNA_D-herbacea_F_contig109.785.1 vs. uniprot
Match: D7G899_ECTSI (UBA/TS-N domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G899_ECTSI) HSP 1 Score: 367 bits (941), Expect = 4.580e-107 Identity = 301/859 (35.04%), Postives = 409/859 (47.61%), Query Frame = 3
Query: 501 DCESNYEWE---SDGTEPDQSAQGKALAEEQA-AVFQRSDGIFAKVQNPHPRMIRVWVSVASWRLYEGLAPRAIEALGLDPKKGVQLMLVTDGLYMSSSVPPEVKWVQQLEDTDIGNDADFSARSR-GETFPLQWMLRKRLEEMMFRQWHPSPTDEYDDQEHGVPGKRMRREEDGEDCDSPAMQRAIASICECANVSNELAQYAMRAAKCDQQAQLNLLDDGLRVGLQEAMVDDRLADIAELKSSFPSVP--EVMRGARLDCGRTTTTGRRFLAFIDASQSSAELDLLRRMSKKSTHGAPR----LRLLSCRCEEIRGQAASVSDRGRASSTGARPTTTVHTGVLSDPFEMKPSVKMSAWCGA------GSGLEV-----AMAEEERAERRGLLQDMSESNLLVRVALSVIKKLRSANSNCLVCDDPIRGYLPAVPIVCAKELCVMSSEDMGCGTDVESQVAMKGDTVDLLINMFWMAMRGSRPELGFPDKVGF---FLFQKRTARPKMLEVSRIV-VVGTVVRLERDAWSKAKCSGQATTEYPSPPEPGLCRLSVGGDYITFGGGGGAKSTSSA---LKSRKKRGFCSVSLLNRDCIVAKPTCIRRKKEELAGGVSSVFPPSVPDTVGIPAAAHMEASDGVGETEDGAPQTLRQALNDRHQLAYPLLRWLLSANRAHLRPLEADELIPEIRCEKQFMLVTGTAEREVKFQQLKREAAKRGG----TGSFYAFHGSKSENWHGILQLGLKNMSATQYMSSGASFGKGIYMADQMTVSLTYASRM--SIGAHWPMARTK--EKTIIVAVCEVVDREGNTWLQQDSQSFVVPDEECVTTRYLLVNPT---SKDVFASKITI 2957
D +S Y WE SDG E + S +G LA+ A A+ +G+FAKV+ +IR+WV V RL+EGLA A+EALGLDP K V +M TD Y V P+V+W +Q++ D D R GE FPLQ L ++L+E + W P D R+RRE A R + + +DG +V A T A D++ ++ S T GA R L+ + +E R + D R+S A G + +M P + A GL + A E+ R L+ ++E+N L RVAL+++KKLR+AN +CLVCD+PI G+LPAVPIVC KE C SE MGCGTDVESQV KG+TVDLL+++FWMAM R EL FP V +F+ + R + +V +++ + TV ++R K G+ P+ G ++ ST+ A L+ + R + ++ N G T++ +L +AL +++ LAY LLRWLLSANRAHLRPL ELIPEI C+KQF LVTGTAERE +FQ LKREAA G TGSFYAFHGS NWHGILQ GLKNMS +++MS+GA+ G GIYMA+Q+++SL YA S HWP A + +IVA+CEV+DRE +++ +VVPDEECV TR+LL+NP + + AS +TI
Sbjct: 25 DYDSEYAWEEGQSDG-EVESSTKGMDLAKADADALNVDVEGMFAKVEAHTSTLIRLWVCVEHSRLFEGLATSAVEALGLDPAKDVMVMFTTDQDY-PGCVRPKVQWARQVDPVKSKAD-DLCPEGRIGEIFPLQGTLCQKLDEDLKGMW-PRAADR----------TRVRRE-------ISAQLRGGXXXXXXXXXXXXXXXXXXXXXXXXSSGRAGVTEDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVHGAAPPSVXXXXWTXXXXAAEPDSAAVQWAIE-----SICETTGASRELVAYTLMVSKYDEHRAHLTLLDDGLRSSLEEAF-------GKIQRLKDMYPFADEALLLDAVAVHPRSDGLRSNFVRGSEAREDLDARTAKLEQLAEANPLARVALTIMKKLRNANKDCLVCDEPIEGFLPAVPIVCPKEFCRWRSEQMGCGTDVESQVLRKGETVDLLVDLFWMAMHSGRSELAFPATVQSGTDLVFKHPSGRNDVDKVQQVLRALPTVADMQRCIKRKR---GEGEEGEDDDPQAGKTTMA---------------STTPAPPLLEDEQARQRRAANVANASANAXXXXXXXXXXXXXXXXXXXXXXXXX-----------XXXXRGHDATDESGGLSLEKALAEKNPLAYRLLRWLLSANRAHLRPLREWELIPEIPCQKQFTLVTGTAEREARFQVLKREAALLSGGETGTGSFYAFHGSGPGNWHGILQEGLKNMSGSRWMSTGAAMGSGIYMANQLSISLGYAGGRGGSCSGHWPNAERVGGQNPVIVAICEVIDRESYKTRGRNAGYYVVPDEECVATRFLLINPKPGHAGGILASCLTI 821
BLAST of mRNA_D-herbacea_F_contig109.785.1 vs. uniprot
Match: A0A6H5JHW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHW3_9PHAE) HSP 1 Score: 306 bits (783), Expect = 4.340e-86 Identity = 271/831 (32.61%), Postives = 358/831 (43.08%), Query Frame = 3
Query: 555 AQGKALAEEQA-AVFQRSDGIFAKVQNPHPRMIRVWVSVASWRLYEGLAPRAIEALGLDPKKGVQLMLVTDGLYMSSSVPPEVKWVQQLEDTDIGNDADFSARSRGETFPLQWMLRKRLEEMMFRQWHP------SPTDEYDD----QEHGVPGKRMRREEDGEDCDSPAMQRAIASICECANVSNELAQYAMRAAKCDQQAQLNLLDDGLRVGLQEAMVDDRLADIAELKSSFPSVPEVMRGARLDCGRTTTTGRRFLAFIDASQSSAELDLLRRMSKKSTHGAPRLRLLSCR--CEEIRGQAASVSDRGRASSTGARPTTTVHTGVLSDPFEMKPSVKMSAWCGAGSGLEVAMAEEERAERRGLLQDMSES-----NLLVRVALSVIKKLRSANSNCLVCDDPIRGYLPAVPIVCAKELCVMSSEDMGCGTDVESQVAMKGDTVDLLINMFWMAMRGSRPELGFPDKVGFFLFQKRTARPKMLEVSRIVVVGTVVRLERDAWSKAKCSGQATTEYPSPPEPGLCRLSVGGDYITFGGGGGAKSTSSALKSRKKRGFCSVSLLNRDCIVAKPTCIRRKKEELAGGVSSVFPPSVPD-----------------------TVGIPAAAHMEASDGVGETEDGAPQTLRQALNDRHQLAYPLLRWLLSANRAHLRPLEADELIPEIRCEKQFMLVTGTAEREVKFQQLKREAAKRGGTGSFYAFHGSKSENWHGILQLGLKNMS-----------------------ATQYMSSGASFGKGIYMADQMTVSLTYASRMSIGA-HWPMARTKEKTIIVAVCEVVDREGNTWLQ 2852
+Q K LA A A+ + DG+ A+VQ +R+WV V WRLY L+ R +EALGLDP KGV +ML TD Y S+V PEVKW++Q+ + S G+TF L+W LRKRLEE + R W P SP DE D +E G+ K R+ C ++R +CEC V ELA YA++ DD E + L D+AEL++ F V +++ + + H PR + L C C+ G+ S + P TT E+E ER G +++ + NLL+RVAL++I K+R+AN CLVC D I GYLPAVPIVC K V G+TVDLLI++F+MAM G RPEL FP V L T V RI V + S SP ++ G G G K +SS S +V+ D I T R +G A + DG +D + + W + RAHLRPL +E+I EI C KQFMLVTGTAERE FQ++K+EAA G TGSF+AFHGSK +NWH ILQLGLKNMS +++YMSSGA++G G+YMAD+++VSL YA+ S G HWP+ T +IVAVCEVVDR+G ++
Sbjct: 6 SQRKDLANGDALAINEGLDGVAARVQARSTYQLRLWVVVQPWRLYNHLSSRTVEALGLDPMKGVMVMLTTDQHYTLSTVRPEVKWLRQVHPDKVEGSMRCDG-SAGDTFSLEWTLRKRLEEDLSRNWPPAPRCARSPDDERDAGTCAREEGLVCKNDERK-----CFKDTVRR----MCECTGVVEELAVYALQ-------------DD-------EQQAHNLLLDMAELQNIFEVVEQMVL----------------------------------LHAAAVH--PRNKELQCDFVCQVETGKRLSS-----CTIPSPPPLTT---------------------------------EDEGGERLGPTAELANAADTNGNLLLRVALTIIAKIRNANKMCLVCGDAIEGYLPAVPIVCPK-------------------VEKNGETVDLLIDLFYMAMHGRRPELAFPSTVREILATYPTVEDMRRSVKRIAEKRKV-----GSPSSXXXXXXXXXXXXSPCWDEEANVADG----NMGNIDGVKPSSSGAASVPATVDAAVA----DTIDEGDTESRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAMGGVVAGSLVGIDGAEGYDDAEADDGGKGREE----------WNPLSTRAHLRPLREEEIIREIPCAKQFMLVTGTAEREANFQRMKKEAASNGRTGSFFAFHGSKPDNWHAILQLGLKNMSGIYDPSCHQNDCWLESGSGGLPKSSKYMSSGAAYGTGVYMADKLSVSLRYAA--SDGTEHWPLGETSGMAVIVAVCEVVDRQGTATIE 688
BLAST of mRNA_D-herbacea_F_contig109.785.1 vs. uniprot
Match: A0A6H5JA28_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA28_9PHAE) HSP 1 Score: 239 bits (609), Expect = 1.930e-61 Identity = 236/808 (29.21%), Postives = 333/808 (41.21%), Query Frame = 3
Query: 606 DGIFAKVQNPHPRMIRVWVSVASWRLYEGLAP-RAIEALGLDPKKGVQLMLVTDGLYMSSSVPPEVKWVQQLEDTDIGNDADFSARSRGETFPLQWMLRKRLEEMMFRQWHPSPTDEYDDQEHGVPGKRMRREEDGEDC--------------------------------DSPAMQRAIASICECANVSNELAQYAMRAAKCDQQ-AQLNLLDDGLRVGLQEAMVDDRLADIAELKSSFPSVPEVMRGARLDCGRTTTTGRRFLAFIDASQSSAELDLLRRMSKKSTHGAPRLRLLSCRCEEIRGQAASVSDRGRASSTGARPTTTVHTGVLSDPFEMKPSVKMSAWCGAGSGLEVAMAEEERAERRGLLQDMSESNLLVRVALSVIKKLRSANSNCLVCDDPIRGYLPAVPIVCAKELCVMSSEDMG------------------------------CGTDV---------ESQVAMKGDTVDLLINMFWMAMRGSRPELGFPDKVGFFLFQKRTARPKMLEVSRIVV-----VGTVVRLERDAWSKAKCSGQATTEYPSPPEPGLCRLSVGGDYITFGGGGGAKSTSSALKSRKKRGFCSVSLLNRDCIVAKPTCIRRKKEELAGGVSSVFPPSVPDTVGIPAAAHMEASDGVGETEDGAPQTLRQALNDRHQLAYPLLRWLLSA-NRAHLRPLEADELIPEIRCEKQFMLVTGTAEREVKFQQLKREAA-KRGGTGSFYAFHGSKSENWHGILQLGLKNMSATQYMSSGASFGKGIYMADQMTVSLTYASRMSIGAHWPMARTK 2789
DGI A+V + P + +WV V RL EG A ++ +GLDP KGV +ML T Y+SS P+VKW +Q+ + + S G+TFP +WML +++ + R W EH G R RE + C DS A++RA+ ICE VS LA Y +R +K D+Q AQL L D+ R L+ A + ELK FP V EV F + ++L R P L L + +G A D L D + RR L+ ++++N LV VAL+VI+ L++ CLVC D I+G+ ++P VC + LC ++S + +D+ E QV G+ V+LLI++F A+ G+RPELGFPD V RT ++E R+V+ V V R R G+ + + LS + GGG +R V++ D ++ GG S DT G E G L++AL+ L YPLL WLLS + HL L+ E I + C+KQF+L T T+ RE +FQ +KREAA GTGS +AFHGS NWHGIL+LG+KNMS ++YMS+G GKGIYM+ + SL+Y ++ H P+ R K
Sbjct: 104 DGISARV-HLSPALTNIWVYVGPRRLSEGRASGTCVKTVGLDPSKGVLVMLTTPHDYISSGEFPQVKWARQVAPAAMDKQKMDTYGSIGKTFPHEWMLCGKIKAQLTRAWSQGKGTSRTSGEHAKGGDRPEREMGADVCRDGGSPAREGGVTAAMTAGEGRANEETGGGKLDSAAIRRAVKMICESTVVSAGLAAYVLRISKNDEQKAQLCLADEEQRPALKAAF-----KEFTELKGRFPQVDEVS------------------CFHAVAAHPGSIELQRDYLVCMALAQPLLYPLP----QPKGDTADGDD-------------------LLDQY-----------------------------RRAELKTLAKTNPLVCVALTVIEGLKNIVETCLVCGDEIQGHTVSMPTVCHQRLCTLTSRVLESRKRWNFAFHQAQSPTMSPARQVVRKKLFEAPSDIVLVSPAGGLEGQVLNNGEVVELLIDLFRRALEGTRPELGFPDAVFGLQGTGRTRAESVIEKVRLVLNALPSVADVQRCIR---------GEGSLGNEEKQNDSIGELSSPSSFGCQVGGGVGSGVGVPFGAR-------VAVAGVD-------------DDTKGGEGS-------DT-------------GAKEAPSGEVSPLKEALSKIDPLLYPLLEWLLSTIHGGHLHLLKEAEAIEGVSCKKQFVL-TDTSAREERFQAMKREAAASSNGTGSLFAFHGSAPGNWHGILRLGIKNMSGSKYMSNGLVCGKGIYMSRTLGASLSY----TLEVHRPVVRIK 781
BLAST of mRNA_D-herbacea_F_contig109.785.1 vs. uniprot
Match: D7FUS7_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUS7_ECTSI) HSP 1 Score: 184 bits (468), Expect = 1.330e-45 Identity = 168/584 (28.77%), Postives = 239/584 (40.92%), Query Frame = 3
Query: 1602 RRGLLQDMSESNLLVRVALSVIKKLRSANSNCLVCDDPIRGYLPAVPIVCAKELCVMSSEDM---------------------------------------GCGTDVESQVAMKGDTVDLLINMFWMAMRGSRPELGFPDKVGFFLFQKRTARPKMLEVSRIVV--VGTVVRLERDAWSKAKCSGQATTEYPSPPEPGLCRLSVGGDYITFGGGGGAKSTSSALKSRKKRGFCSVSLLNRDCIVAKPTCIRRKKEELAGGVSSVFPPSVPDTVGIPAAAHMEASDGVGETED--------GAPQTLRQALNDRHQLAYPLLRWLLSA-NRAHLRPLEADELIPEIRCEKQFMLVTGTAEREVKFQQLKREAA-KRGGTGSFYAFHGSKSENWHGILQLGLKNMSATQYMSSGASFGKGIYMADQMTVSLTY----------------------------------------------ASRMSI------------------------------GAHW-----PMARTKEKTIIVAVCEVVDREGNTWLQQDSQSFVVPDEECVTTRYLLVNPTSKDVFASKITI 2957
RR LQ ++++N LV AL+VI+ L++ CLVC D I+G+ ++P VC + LC +S + VE QV G+ V+LLIN+F A+ G+RPELGFPD V R ++E R+V+ + +V ++R G+ + + LS ++ GGGG S GGV F V A A ++ G GE D G L++AL+ QL YPLL WLLS + HL L+ E I + C+KQF+L T T+ RE FQ +KREAA GTGSF+AFHGS NWHGIL+LG+KNMS ++YMS+G+ GKGIYM + SL+Y ASR + G H P + IVAVCEV+DR +++++ V+PDE CV TR+LL++P+ + + + +
Sbjct: 29 RRAELQTLAKTNPLVCAALTVIEGLKNIVETCLVCGDQIQGHTVSMPTVCHQRLCTSTSRVLERRKRWTFEFHQAQSPTMSPARQVVRKKLFEAPSDIVLVSPAGGVEGQVLNNGEVVELLINLFRRALEGTRPELGFPDAVFGLRGTGRKRTKSVIEKVRLVLNALPSVADMQRCI------RGEGSLGNEEKKNDSIGELSSPSSFVCQVGGGGGVS---------------------------------------GGVGVPFGARV-------AVAGVDDDTGRGEGSDAEAKEPPSGEVSPLKEALSKIDQLLYPLLEWLLSTIHGGHLHLLKEAEAIQGVSCKKQFVL-TDTSAREECFQAMKREAAASSNGTGSFFAFHGSAPGNWHGILRLGIKNMSGSEYMSNGSVCGKGIYMGRTLGASLSYTLEVRRPVVRIAATPATAARPKATNRGIVAAISRAASRVFGRATTKASRAAASXXXXNATGAAPAPAFVGSPSTQGAASGGRGGHGNRLNPPAVNALKAPPIVAVCEVIDRPE---YKRNNRLLVIPDEHCVATRFLLIDPSRASLRLANVDL 556
BLAST of mRNA_D-herbacea_F_contig109.785.1 vs. uniprot
Match: D7G896_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G896_ECTSI) HSP 1 Score: 182 bits (461), Expect = 1.030e-43 Identity = 217/741 (29.28%), Postives = 294/741 (39.68%), Query Frame = 3
Query: 606 DGIFAKVQNPHPRMIRVWVSVASWRLYEGLA-PRAIEALGLDPKKGVQLMLVTDGLYMSSSVPPEVKWVQQLEDTDIGNDADFSARSRGETFPLQWMLRKRLEEMMFRQWH----PSPT-DEY----DDQEHGVPGKRMR-------------------------REEDGEDCDSPAMQRAIASICECANVSNELAQYAMRAAKCDQQ-AQLNLLDDGLRVGLQEAMVDDRLADIAELKSSFPSVPEVM---------RGARLDCGRTTTTGRRFLAFIDASQSSAE-------LDLLRRMSKKSTHGAPRLRLLSCRCEEIRGQAASVSDRGRASSTGARPTTTVHTGVLSDPFEMKPSVKMSAWCGAGSGLEVAMAEEERAERRGLLQDMSESNLLVRVALSVIKKLRSANSNCLVCDDPIRGYLPAVPIVCAKELCVMSSEDMGCGTDVESQVAMKGDTVDLLINMFWMAMRGSRPELGFPDKVGFFLFQKRTARPKMLEVSRIVVVGTVVRLERDAWSKAKCSGQATTEYPSPPEPGLCRLSVGGDYITFGGGGGAKSTSSALKSRKKRGFCSVSLLNRDCIVAKPTCIRRKKEELAGGVSSVFPPSVPDTVGIPAAAHMEASDGVGETEDGAPQTLRQALNDRHQLAYPLLRWLLS-ANRAHLRPLEADELIPEIRCEKQFMLVTGTAEREVKFQQLKREAA-KRGGTGSFYAFHGSKSENWHGILQLGLKNMSAT 2666
DGI A+VQ + +WV + RL EG A ++E +GLDP KGV +ML TD Y SSS P+V W +Q+ + + S GETFP +WML +++ + R W PS T DE+ E G+ G R ++ DG + DS A +RA+ ICE VS A Y +R +K D+Q AQL LL++ R L+ A A+ ELK FP V E +L L QS E LD RR K L L + +SV +RG+ T+ P + K S W +L S S +R S ++ R + +V P G VE QV G+ V+LLI++F A+ G+RPELGFPD V L A P + ++ R + L +A KA G ++ PSP L +V G I GGG G+ + G + G L++AL+ + L+YPLL WLLS A+ L L+ E I I C+ QF+L T T+ERE +FQ +KREAA GTGSF+AFHGS NWHGIL+LG+KNMS T
Sbjct: 101 DGITARVQLSSV-LTNLWVYIDPRRLSEGRALGTSVETVGLDPSKGVVVMLTTDYGYTSSSKCPKVLWARQVARAAMNKPKMDTYGSIGETFPHEWMLCGKIQAELTRAWSQGMGPSRTADEHVKGGHQSEQGMDGDVCRDGGSPVREGRVAAATAAGEXXXXAKKKTDGGELDSAATRRAVKMICEAMVVSAGFAAYVLRISKYDEQKAQLCLLEEEQRSSLKAAF-----AEFTELKRRFPQVDEACCFDAVAEHPGSIQLQHDSVVRVALGGLLLDPPPQSKGETGDGHGLLDEYRRAELKKLAETNPLPLCT--------STSSVLERGKRWKFEFARLPTM------PPERQRVGKKFSPW---------------------MLPSHSYSGASLRSKFSK-QQPRFETQSDIVLPGPAGG--------------------------VEGQVFNNGEVVELLIDLFRRALEGTRPELGFPDAVRLVL----NALPSVADMQRCI--RGEGSLGNEAKPKASVGGLSS---PSP----LGSQAVAGVVIDKGGGEGSNA------------------------------------------------------------------GERRSPTGEVSPLKEALSKINPLSYPLLEWLLSTAHGGQLHLLKEAEAIEGISCKNQFVL-TDTSEREERFQAMKREAAASSNGTGSFFAFHGSAPGNWHGILRLGIKNMSGT 693
BLAST of mRNA_D-herbacea_F_contig109.785.1 vs. uniprot
Match: D8LFE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE1_ECTSI) HSP 1 Score: 139 bits (351), Expect = 8.500e-32 Identity = 68/86 (79.07%), Postives = 73/86 (84.88%), Query Frame = 3
Query: 2403 AYPLLRWLLSANRAHLRPLEADELIPEIRCEKQFMLVTGTAEREVKFQQLKREAAKRGGTGSFYAFHGSKSENWHGILQLGLKNMS 2660
AYPLLRWLLSA RAHLRPL DE+I EI C KQFMLVTGTAERE FQ++KREAA G TGSF+AFHGSK +NWH ILQLGLKNMS
Sbjct: 283 AYPLLRWLLSATRAHLRPLREDEIIREIPCAKQFMLVTGTAEREANFQRMKREAASNGRTGSFFAFHGSKPDNWHAILQLGLKNMS 368
BLAST of mRNA_D-herbacea_F_contig109.785.1 vs. uniprot
Match: A0A7S2FMF6_9STRA (Poly [ADP-ribose] polymerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FMF6_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.250e-29 Identity = 73/183 (39.89%), Postives = 104/183 (56.83%), Query Frame = 3
Query: 2421 WLLSANRAHLRPLEADELIPEIRCEKQFMLVTGTAEREVKFQQLKREAAKRGGTGSFYAFHGSKSENWHGILQLGLKNMSATQYMSSGASFGKGIYMADQMTVSLTYASRMSIGAHWPMARTKEKTIIVAVCEVVDREGN-TWL----------QQDSQSFVVPDEECVTTRYLLVNPTSKDV 2936
W+L+ NRAHLRPLE E E+ E QF+L++ EREV FQ++K + GS +A+HGS + NWH IL+ LKNMS T++MS+G +G GIY A + SL Y + + K +A+CE+++RE T+ D +VVP EE V TR+L+VNP+ + V
Sbjct: 2 WILTTNRAHLRPLEPHERFDEVGTEHQFVLMSAPVEREVAFQEMKSVS------GSIFAWHGSGAGNWHVILRTSLKNMSGTKHMSTGQVYGAGIYFASNSSTSLGYCGKTRPVSWKNSKHFKLPMTCLALCEIINREKEFTYYPGKGAAKGKKMNDQGIYVVPQEEYVMTRFLIVNPSMRKV 178
BLAST of mRNA_D-herbacea_F_contig109.785.1 vs. uniprot
Match: A0A7S0QIR1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QIR1_9CRYP) HSP 1 Score: 123 bits (309), Expect = 1.160e-27 Identity = 75/180 (41.67%), Postives = 104/180 (57.78%), Query Frame = 3
Query: 2415 LRWLLSANRAHLRPLEADELIPEIR--CEKQFMLVTGTAEREVKFQQLKREA-AKRGGTGSFYAFHGSKSENWHGILQLGLKNMSATQYMSSGASFGKGIYMADQMTVSLTYASRMSIGAH-WPMARTKEKTIIVAVCEVVDREGNTWLQQDSQSFVVPDEECVTTRYLLVNPTSKDVFA 2942
LRWLL + R H+R L +E + + QF++++G+ E E +F+ + A A GG+GSF+A+HGS NWH IL+LGLKNMS T+YMS+GA+FG GIY+A + SL+YA W + +A+CEVVD VVPDE+ V TRYL V P + +A
Sbjct: 29 LRWLLCSCRTHIRRLGPEEQVRGVPDGWTHQFVMLSGSPEHEARFRAARAAARAATGGSGSFHAWHGSPLCNWHSILRLGLKNMSNTEYMSTGAAFGSGIYLARDLGTSLSYAQGYCGSTQGWEKSVFGPSHCCLALCEVVDCPSK--FTSVKPYLVVPDEDLVMTRYLFVVPPGQLEYA 206 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig109.785.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig109.785.1 >prot_D-herbacea_F_contig109.785.1 ID=prot_D-herbacea_F_contig109.785.1|Name=mRNA_D-herbacea_F_contig109.785.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=940bp MPVTADVVGGGKYVLEKAESGANCMAVGGATVETMEAFSPLDGVEEQRARback to top mRNA from alignment at D-herbacea_F_contig109:769385..796677- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig109.785.1 ID=mRNA_D-herbacea_F_contig109.785.1|Name=mRNA_D-herbacea_F_contig109.785.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=27293bp|location=Sequence derived from alignment at D-herbacea_F_contig109:769385..796677- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig109:769385..796677- >mRNA_D-herbacea_F_contig109.785.1 ID=mRNA_D-herbacea_F_contig109.785.1|Name=mRNA_D-herbacea_F_contig109.785.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=5640bp|location=Sequence derived from alignment at D-herbacea_F_contig109:769385..796677- (Desmarestia herbacea DmunF female)back to top |