mRNA_D-herbacea_F_contig1069.658.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig1069.658.1
Unique NamemRNA_D-herbacea_F_contig1069.658.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
BLAST of mRNA_D-herbacea_F_contig1069.658.1 vs. uniprot
Match: D7FKS6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKS6_ECTSI)

HSP 1 Score: 425 bits (1093), Expect = 8.860e-139
Identity = 232/347 (66.86%), Postives = 265/347 (76.37%), Query Frame = 1
Query:  244 YGPPRAGRDIFGSDGSRVHIKFSGNGGRRRGSRARFNPDVGDVTSNTITPGDVIMVGGVSAGIAAVQRYHRKKLLEEEGLNSRGASTAATAWSAAPMP---GGGG---TAEISTLQLAMYCDRRGGQRDVLDTLNKLSQTADVNSPRGLSTLVNEVCLALLRSERDWIGSMGSIKEYPREGSSAGGRGARKKGSPRMRAKRDFNRFVMRERSKWERETVSNTPERGFSSSMAPGWRE-DGKDGGTYAVATLMIAWAGLRSTPPRTQKRERAWFWQDDNRDRED-RDVVFSVTNRKSTMALLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDRDALDTKWPELRAL 1260
            Y  PRAGRDI+GS+GSR HI+F G  G RR +RARFNP  GD  S +ITPGDV M+GGVSA +AAVQRY+RK+ ++EEG   R          +AP+P   G GG   TA ++TLQL +YCDR+GGQ DVL TL+KLSQTADVNSPRGLSTL+NEVCL LLRS RDW+G  GS+K Y  EG S   RG  KK SP  RAKRDFNR  MRERSKWERETVSNTP+RGFSSS AP W     +  GTYAVATL++AW+GL STPPR + R   WF +D +RDR+D R V FSV NR+S + LLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDR+ LDTKWPELRAL
Sbjct:  206 YQRPRAGRDIYGSEGSRFHIRFDGGRGGRRSTRARFNPYDGDAPSTSITPGDVAMIGGVSAAVAAVQRYNRKRFVDEEGSGQR---------PSAPLPPRSGRGGSSQTAVVTTLQLGLYCDRQGGQGDVLATLDKLSQTADVNSPRGLSTLINEVCLTLLRSGRDWLGGTGSVKMYASEGRS-NSRG--KKSSPVSRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGGFSAQKSGTYAVATLIVAWSGLNSTPPRAEPRRGGWFTRD-SRDRDDDRGVEFSVVNRQSALTLLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDREDLDTKWPELRAL 539          
BLAST of mRNA_D-herbacea_F_contig1069.658.1 vs. uniprot
Match: A0A835ZEJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEJ7_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 5.630e-17
Identity = 81/252 (32.14%), Postives = 120/252 (47.62%), Query Frame = 1
Query:  517 WSAAPMPGG--GGTAEISTLQLAMYCDRRGGQRDVLDTLNKLSQTADVNSPRGLSTLVNEVCLALLRSERDWIGSMGSIKEY-PREGSSAGGRGARKKGSPRMRAKRDFNRFVMRERSKWERETVSNTPERGFSSSM-APGWREDGKDGGTYAVATLMIAWAGLRSTPPRTQKRERAWFWQDDNRDREDRDVVFSVTNRKSTMALLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDRDALDTKWPELRAL 1260
            WS+  + GG  G    +  LQ+A+    R   R +L  L  +++ A+ +S  GLST V+EVCLAL+R + DWI S    + + PR                  RA+  FN + + ER+K ERETVS       S S  + G R +     T AV T+++A   L+    +  + ER                  S+ +  +   +L  +  +A    GENVL VE+LWTP +P +SLDR A+   +PEL  L
Sbjct:  185 WSSVDVEGGSLGRGVGVVKLQVALNASDR-SSRGILAQLKSIAERAETSSRGGLSTAVSEVCLALVRRQPDWIASASQYEYFAPRSAE---------------RAEAVFNTYAIAERTKVERETVSRFGGEDLSDSRRSDGVRPEDLGKPTQAVVTIVLA---LKGESLKRFQLER------------------SINSASALRNVLTQVAGDATTDDGENVLGVELLWTPEEPWESLDRQAVLEDFPELMDL 399          
BLAST of mRNA_D-herbacea_F_contig1069.658.1 vs. uniprot
Match: A0A0M0K0F2_9EUKA (Membrane protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K0F2_9EUKA)

HSP 1 Score: 82.8 bits (203), Expect = 3.600e-14
Identity = 75/232 (32.33%), Postives = 102/232 (43.97%), Query Frame = 1
Query:  568 LQLAMYCDRRGGQRDVLDTLNKLSQTADVNSPRGLSTLVNEVCLALLRSERDWIGSMGSIKEYPREGSSAGGRGARKKGSPRMRAKRD----FNRFVMRERSKWERETVSNTPERGFSSSMAPGWREDGKDGGTYAVATLMIAWAGLRSTPPRTQKRERAWFWQDDNRDREDRDVVFSVTNRKSTMALLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDRDALDTKWPEL 1251
            LQ+A YCD R  Q  +   LNK++ +AD +S  GL +LV++ CLA+LRS +DW+ +         E   AG              K D    +NR V+ ERSKWE E  +           APG         TY VATL++    LRS  P                       +  ++        L+ L   AA    +N+L  EVLWTP D +D +DRD L   +PEL
Sbjct:   58 LQVACYCDDR--QNSLFGKLNKIASSADTDSELGLQSLVSDTCLAILRSSKDWLAAR-------TESEIAG------------LLKNDVDAAYNRLVVTERSKWEVEQKA-------LKRTAPGQP-------TYMVATLVVL---LRSAQP-----------------------LKPISQNGDLRDALQNLA--AAVSVDDNLLAAEVLWTPEDTNDVMDRDELFLNFPEL 226          
BLAST of mRNA_D-herbacea_F_contig1069.658.1 vs. uniprot
Match: A0A7S0QBA5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0QBA5_9EUKA)

HSP 1 Score: 80.9 bits (198), Expect = 1.780e-13
Identity = 70/231 (30.30%), Postives = 100/231 (43.29%), Query Frame = 1
Query:  568 LQLAMYCDRRGGQRDVLDTLNKLSQTADVNSPRGLSTLVNEVCLALLRSERDWIGSMGSIKEYPREGSSAGGRGARKKGSPRMRAKRDFNRFVMRERSKWERETVSNTPERGFSSSMAPGWREDGKDGGTYAVATLMIAWAGLRSTPPRTQKRERAWFWQDDNRDREDRDVVFSVTNRKSTMALLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDRDALDTKWPELRAL 1260
            LQ+A YC  R  Q  +   L  L++TAD +S  GL  LV++ CLA LRS +DW+ +  + +                KG      +  +NR V++ERSKWE E  S T     S+  A           TY VATL++        P                        V  V   +  ++ L    D + E   +N++  EVLWTP DP+D +DRD +   +PEL  L
Sbjct:   62 LQVACYCGDR--QNSLYGKLQSLARTADTSSYEGLQQLVSDTCLATLRSSKDWLAARTTSET---------------KGLFSNDVESQYNRIVVKERSKWESEQKSLTR---TSAGEA-----------TYMVATLVVLLRNGSELPE-----------------------VTGVNELREAISQL--AADVSIE---DNLIAAEVLWTPEDPNDVMDRDDMFLNFPELVTL 233          
BLAST of mRNA_D-herbacea_F_contig1069.658.1 vs. uniprot
Match: A0A7S2X718_9EUKA (Hypothetical protein n=3 Tax=Lotharella TaxID=74819 RepID=A0A7S2X718_9EUKA)

HSP 1 Score: 82.8 bits (203), Expect = 2.610e-13
Identity = 69/234 (29.49%), Postives = 97/234 (41.45%), Query Frame = 1
Query:  550 TAEISTLQLAMYCDRRGGQRDVLDTLNKLSQTADVNSPRGLSTLVNEVCLALLRSERDWIGSMGSIKEYPREGSSAGGRGARKKGSPRMRAKRDFNRFVMRERSKWERETVSNTPERGFSSSMAPGWREDGKDGGTYAVATLMIAWAGLRSTPPRTQKRERAWFWQDDNRDREDRDVVFSVTNRKSTMALLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDRDALDTKWPEL 1251
            T  +  LQ+A+YC  R G   +   LN L+  AD  S  GL  LV E  LALLRSE DW+       +    G S     A             FN+ +++ER+K+E E        G +               +Y + T+M+A   LR  P                    +   +  +   +S +A+       A     EN+L  EVLWTP DPDDSL R+ +  K+PEL
Sbjct:  185 TGTVMLLQVAVYCGDR-GPNSLYGRLNNLAAGADTWSEEGLRNLVQETTLALLRSEEDWVAGRSETFQKGMLGKSNDVESA-------------FNQALLKERAKFEEENTGRLKRVGANKP-------------SYMIVTVMVA---LRDAP--------------------NLPTIRGLDEMRSALAMT-----SARASIEENLLAAEVLWTPEDPDDSLTREEVFLKFPEL 363          
BLAST of mRNA_D-herbacea_F_contig1069.658.1 vs. uniprot
Match: A0A7S4DSS3_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DSS3_9EUKA)

HSP 1 Score: 81.3 bits (199), Expect = 8.140e-13
Identity = 68/234 (29.06%), Postives = 97/234 (41.45%), Query Frame = 1
Query:  550 TAEISTLQLAMYCDRRGGQRDVLDTLNKLSQTADVNSPRGLSTLVNEVCLALLRSERDWIGSMGSIKEYPREGSSAGGRGARKKGSPRMRAKRDFNRFVMRERSKWERETVSNTPERGFSSSMAPGWREDGKDGGTYAVATLMIAWAGLRSTPPRTQKRERAWFWQDDNRDREDRDVVFSVTNRKSTMALLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDRDALDTKWPEL 1251
            T  +  LQ+A+YC  R G   +   LN L+  AD  S  GL  LV E  LALLRSE DW+       +    G S     A             FN+ +++ER+K+E E        G +               +Y + T+M+A   LR  P                    +   +  +   +S +A+       A     EN+L  EVLWTP DP+DSL R+ +  K+PEL
Sbjct:  182 TGTVMLLQVAVYCGDR-GPNSLYGRLNNLAAGADTWSEEGLRNLVQETTLALLRSEEDWVAGRSETFQKGMLGKSNDVESA-------------FNQALLKERAKFEEENTGRLKRVGANKP-------------SYMIVTVMVA---LRDAP--------------------NLPTIRGLDEMRSALAMT-----SARASIEENLLAAEVLWTPEDPEDSLTREEVFLKFPEL 360          
BLAST of mRNA_D-herbacea_F_contig1069.658.1 vs. uniprot
Match: A0A7S0H5R7_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H5R7_9EUKA)

HSP 1 Score: 79.7 bits (195), Expect = 2.590e-12
Identity = 67/234 (28.63%), Postives = 98/234 (41.88%), Query Frame = 1
Query:  550 TAEISTLQLAMYCDRRGGQRDVLDTLNKLSQTADVNSPRGLSTLVNEVCLALLRSERDWIGSMGSIKEYPREGSSAGGRGARKKGSPRMRAKRDFNRFVMRERSKWERETVSNTPERGFSSSMAPGWREDGKDGGTYAVATLMIAWAGLRSTPPRTQKRERAWFWQDDNRDREDRDVVFSVTNRKSTMALLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDRDALDTKWPEL 1251
            T  +  LQ+A+YC  R G+  +   LN L + AD  S +GL  LV E  +ALLRSE DW+       +    G S     A             FN  +++ER+K+E E VS       S    P       D  ++ V T+++A     S P                        V  + + ++ +A+       A     EN+L  EVLWTP D  D+L R+ +  K+PEL
Sbjct:  180 TGTVMLLQVAVYCGDR-GKNSLFSRLNNLGREADTWSEQGLKNLVQESTIALLRSEEDWVAGRSETFQKGMFGKSNDVESA-------------FNAALLQERAKFEEENVSKR-----SKIQTP-------DKPSHMVVTILVALRDAPSLP-----------------------TVSGIEDMRAALAMT-----SARASIEENLLAAEVLWTPEDSSDTLSREEVFLKFPEL 359          
BLAST of mRNA_D-herbacea_F_contig1069.658.1 vs. uniprot
Match: A0A6T9D2F6_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A6T9D2F6_9EUKA)

HSP 1 Score: 74.7 bits (182), Expect = 1.090e-11
Identity = 66/232 (28.45%), Postives = 98/232 (42.24%), Query Frame = 1
Query:  568 LQLAMYCDRRGGQRDVLDTLNKLSQTADVNSPRGLSTLVNEVCLALLRSERDWIGSMGSIKEYPREGSSAGGRGARKKGSPRMRAKRD----FNRFVMRERSKWERETVSNTPERGFSSSMAPGWREDGKDGGTYAVATLMIAWAGLRSTPPRTQKRERAWFWQDDNRDREDRDVVFSVTNRKSTMALLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDRDALDTKWPEL 1251
            LQ+A YC+ R  Q  +   L  +++TAD  S  GL  L ++ CLA+LR+ +DW+                    AR   S     + D    +NR V++ER+KW+ E  S           APG         TY VATL++        P                        +  V++ +  +A L    D + E   +N+L  EVLWTP D +D +DRD +   +PEL
Sbjct:   24 LQVACYCEDR--QTSLAGKLQSIARTADAGSYEGLQALCSDTCLAMLRTSKDWLA-------------------ARTVSSTSTMFQNDVESTYNRLVVQERAKWDMEAKS-------LKRSAPGQP-------TYMVATLVVLLRSGSELP-----------------------AISGVSDLREAIAQL--AADVSVE---DNLLAAEVLWTPEDTNDVMDRDDMFLNFPEL 192          
BLAST of mRNA_D-herbacea_F_contig1069.658.1 vs. uniprot
Match: U5QN19_9CYAN (Uncharacterized protein n=1 Tax=Gloeobacter kilaueensis JS1 TaxID=1183438 RepID=U5QN19_9CYAN)

HSP 1 Score: 74.3 bits (181), Expect = 1.130e-10
Identity = 63/235 (26.81%), Postives = 104/235 (44.26%), Query Frame = 1
Query:  547 GTAEISTLQLAMYCDRRGGQRDVLDTLNKLSQTADVNSPRGLSTLVNEVCLALLRSERDWIGSMGSIKEYPREGSSAGGRGARKKGSPRMRAKRDFNRFVMRERSKWERETVSNTPERGFSSSMAPGWREDGKDGGTYAVATLMIAWAGLRSTPPRTQKRERAWFWQDDNRDREDRDVVFSVTNRKSTMALLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDRDALDTKWPEL 1251
            G  ++  LQ+A+    +  QRD++    +L++ +D ++P GL+ L  EV LALLR+   W+ +    +E PR                 ++A+  FNR  + ER+K+  E VS T   G       G   D  +   Y V TL++A        PR                      + +V +       L  LG  ++E     ++ VEV+W+PAD +D+L  D L T++ +L
Sbjct:  144 GKIDVFRLQVALLATAKQLQRDLI----RLAEQSDTSTPEGLTRLNQEVTLALLRNPEYWVYAKSDAQELPR-----------------LQAESQFNRLALAERTKYTDEVVSKTGSTGLVQKKFDGENPD--EVAEYIVVTLLVA---TEDGAPR----------------------LLNVRSSDDLRQALTILGSLSSE----QIVAVEVVWSPADENDTLTSDELLTQYTDL 326          
BLAST of mRNA_D-herbacea_F_contig1069.658.1 vs. uniprot
Match: A0A8J7B5L9_9CYAN (DUF1517 domain-containing protein n=1 Tax=Nodosilinea sp. LEGE 07298 TaxID=2777970 RepID=A0A8J7B5L9_9CYAN)

HSP 1 Score: 71.6 bits (174), Expect = 2.450e-10
Identity = 63/235 (26.81%), Postives = 105/235 (44.68%), Query Frame = 1
Query:  559 ISTLQLAMYCDRRGGQRDVLDTLNKLSQTADVNSPRGLSTLVNEVCLALLRSERDWIGSMGSIKEYPREGSSAGGRGARKKGSPRMRAKRDFNRFVMRERSKWERETVSNTPERGFSSSMAPGWREDGKDG-GTYAVATLMIAWAGLRSTPPRTQKRERAWFWQDDNRDREDRDVVFSVTNRKSTMALLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDRDALDTKWPELRAL 1260
            ++ LQ+ +  + RG Q    D LN+L+ TAD  + +GL+ L+ E  LALLR    W  +    K+                 +  + A+++FNR+ +  RS++  ET+SN   +   + +      D     G Y +AT+++A  G    P                      D+  S   R++    L  +G  +    GEN+L VEVLWTP    ++L  D L  ++PEL+ +
Sbjct:   48 VAKLQVGLLAEARGLQ----DDLNRLATTADTGTSQGLAKLLQETTLALLRHPDYWAYAASEDKQ-----------------TRLLSAEQEFNRYALSARSRFSAETLSNVNNQLTQAEIQAKLPGDADQAPGEYILATVVVATQGKLDLP----------------------DIYSSADLRQA----LSHIGAVS----GENLLAVEVLWTPQQSGETLSGDELIAQYPELKLI 231          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1069.658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKS6_ECTSI8.860e-13966.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZEJ7_9STRA5.630e-1732.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0M0K0F2_9EUKA3.600e-1432.33Membrane protein n=1 Tax=Chrysochromulina tobinii ... [more]
A0A7S0QBA5_9EUKA1.780e-1330.30Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S2X718_9EUKA2.610e-1329.49Hypothetical protein n=3 Tax=Lotharella TaxID=7481... [more]
A0A7S4DSS3_9EUKA8.140e-1329.06Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S0H5R7_9EUKA2.590e-1228.63Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A6T9D2F6_9EUKA1.090e-1128.45Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
U5QN19_9CYAN1.130e-1026.81Uncharacterized protein n=1 Tax=Gloeobacter kilaue... [more]
A0A8J7B5L9_9CYAN2.450e-1026.81DUF1517 domain-containing protein n=1 Tax=Nodosili... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1069contigD-herbacea_F_contig1069:6705..20447 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score78.2
Seed ortholog evalue9.3e-12
Seed eggNOG ortholog227086.JGI_V11_71083
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Protein of unknown function (DUF1517)
EggNOG OGs2QUI9@2759,COG4371@1
Ec32 ortholog descriptionProtein of unknown function DUF1517
Ec32 orthologEc-21_001970.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1970
Cds size1137
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927475.4130433-UTR-D-herbacea_F_contig1069:6704..74111622927475.4130433-UTR-D-herbacea_F_contig1069:6704..7411Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig1069 6705..7411 -
1690790191.1075377-UTR-D-herbacea_F_contig1069:6704..74111690790191.1075377-UTR-D-herbacea_F_contig1069:6704..7411Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig1069 6705..7411 -
1622927475.50092-UTR-D-herbacea_F_contig1069:20321..204471622927475.50092-UTR-D-herbacea_F_contig1069:20321..20447Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig1069 20322..20447 -
1690790191.1893208-UTR-D-herbacea_F_contig1069:20321..204471690790191.1893208-UTR-D-herbacea_F_contig1069:20321..20447Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig1069 20322..20447 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927475.4320924-CDS-D-herbacea_F_contig1069:7411..75741622927475.4320924-CDS-D-herbacea_F_contig1069:7411..7574Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1069 7412..7574 -
1690790191.1223383-CDS-D-herbacea_F_contig1069:7411..75741690790191.1223383-CDS-D-herbacea_F_contig1069:7411..7574Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1069 7412..7574 -
1622927475.445845-CDS-D-herbacea_F_contig1069:8991..93251622927475.445845-CDS-D-herbacea_F_contig1069:8991..9325Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1069 8992..9325 -
1690790191.1359344-CDS-D-herbacea_F_contig1069:8991..93251690790191.1359344-CDS-D-herbacea_F_contig1069:8991..9325Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1069 8992..9325 -
1622927475.4620125-CDS-D-herbacea_F_contig1069:9513..95891622927475.4620125-CDS-D-herbacea_F_contig1069:9513..9589Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1069 9514..9589 -
1690790191.1525927-CDS-D-herbacea_F_contig1069:9513..95891690790191.1525927-CDS-D-herbacea_F_contig1069:9513..9589Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1069 9514..9589 -
1622927475.4778786-CDS-D-herbacea_F_contig1069:10671..109671622927475.4778786-CDS-D-herbacea_F_contig1069:10671..10967Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1069 10672..10967 -
1690790191.1633022-CDS-D-herbacea_F_contig1069:10671..109671690790191.1633022-CDS-D-herbacea_F_contig1069:10671..10967Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1069 10672..10967 -
1622927475.4897602-CDS-D-herbacea_F_contig1069:20053..203211622927475.4897602-CDS-D-herbacea_F_contig1069:20053..20321Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1069 20054..20321 -
1690790191.1793652-CDS-D-herbacea_F_contig1069:20053..203211690790191.1793652-CDS-D-herbacea_F_contig1069:20053..20321Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1069 20054..20321 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1069.658.1prot_D-herbacea_F_contig1069.658.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig1069 7412..20321 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig1069.658.1

>prot_D-herbacea_F_contig1069.658.1 ID=prot_D-herbacea_F_contig1069.658.1|Name=mRNA_D-herbacea_F_contig1069.658.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=379bp
MAAVTGGRIGGGYSVPEQAPSAPPIQRQQQQYRPQAPQQYGPPRAGRDIF
GSDGSRVHIKFSGNGGRRRGSRARFNPDVGDVTSNTITPGDVIMVGGVSA
GIAAVQRYHRKKLLEEEGLNSRGASTAATAWSAAPMPGGGGTAEISTLQL
AMYCDRRGGQRDVLDTLNKLSQTADVNSPRGLSTLVNEVCLALLRSERDW
IGSMGSIKEYPREGSSAGGRGARKKGSPRMRAKRDFNRFVMRERSKWERE
TVSNTPERGFSSSMAPGWREDGKDGGTYAVATLMIAWAGLRSTPPRTQKR
ERAWFWQDDNRDREDRDVVFSVTNRKSTMALLEWLGDEAAEGRGENVLDV
EVLWTPADPDDSLDRDALDTKWPELRAL*
back to top

mRNA from alignment at D-herbacea_F_contig1069:6705..20447-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig1069.658.1 ID=mRNA_D-herbacea_F_contig1069.658.1|Name=mRNA_D-herbacea_F_contig1069.658.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=13743bp|location=Sequence derived from alignment at D-herbacea_F_contig1069:6705..20447- (Desmarestia herbacea DmunF female)
TCGACGGAGGCGGCACGGGACGAACATGATACCGTCAGCAGCAGCAGACA GCTCCGCAGACTGCCTGGCGCACTCCCTGCATTCCTCGCCACAGCAACCA CAGTAGTGGTAAGCTCGCAACCTTCGATGGCCGCTGTAACTGGAGGAAGG ATAGGGGGGGGCTACAGCGTCCCCGAACAGGCCCCAAGCGCCCCTCCCAT ACAACGACAGCAGCAGCAGTACCGGCCTCAGGCTCCTCAGCAGTACGGCC CACCACGGGCGGGGCGCGACATATTCGGTAGCGATGGCAGCCGCGTTCAC ATCAAATTCTCGGGGAATGGAGGGAGACGAAGGGGGAGCCGTGCAAGATT CAACCCGGACGTCGGCGACGTGACGTCCAACACCATCACGCCTGGTATGT ACGAGCTGCGAACGCGGCTCGCCCTCTGCCTTTTCCTTATGTTGATACAG TACTGCCTCTATAACATGATACTTCGAAGTACTATAATACTACTGCCTAC TGACTACTGTACAAGCAGTTTGATAATACTACTACTGTTCTTGTACACCT ATATACTAGTAATTGGTGATGAGGCGCGACCTCAATACCTGCAGTAGTCA AATCTGCGATGCACTGTTTCGTTAAGGCCACAGTGCCACAGTAAGGAAAA AAAACAGTTTTGTAAAGGAACGGCGTGTTTATCTCGACCGGTCTATTCGT AACTTCGTGCTGATTTCTGTGAATCATATAAATCGCATCTAATATTACAC GAACTATTGTTAAAACACTTGAAAATAGAGTTGGTGAGACAGCAGACAAA TACGTTTGTAGCGTTCTGCTTCTCTGTTCTACTGAGGCTCTTTGCTGGAT GCGCCCAAGCTAAGGTACGCGCCTGGCTCGACTGCCACTGCGGGTGCACG CGGATGCGAGGCATCCCTCTCGAAGTGTGAGAAGAGCGAGCCCACGAAGA AAAGCTCTTGCTTACGGTCTCCAGCAGTCATTCCTCGTGGTCGAGCTAGA CATGAAGGTGTGTGAGATCTTGGTCATCGACATATATATACTATCATATG AGAGATGCCTTACAAGTAGAGAAGCAATCAAGCCGAGGCTGTAAAAGTAA CAGTACTGCCAAGGGGTATACGCTCATGCATCTCGTACTACTACTACTAC TAGTGGTAGAAGGAGTGCTTGTTCTTGACACTATATAGTACGTGGAGCAC CTAGCTGCTGCTGCTGCTGCAGCTAGGTTTGTTTTACGAGCACAACAGAC GTAGTAGTTCAATTACAGTAGTACAACAACATACTGGTACGAGTATAACT GATAAATAATCTGATATTGATATAATAGTACGTATTACAGTTTTTTTTTT TTTCCGTTCCATTTATTATCTCATCACCCTATTCTTTTTCTAGCCCCATC TCTCTCCGTAACTCAGATCCGGGGTCACATAGTAGGCAATCCTCCCTCCT TCCCGCTACGGTACATGCCTACATTTTTATCGCGAGAAGAGTGCAGCACT TTCTTCCCTCGTCGATTTTCATCAATTTGTGCTTACTCACGCTCTCGCGT TTTCCGCGACGGAAGATAGCACAGAAAAGTGCCACCGGGAATCGAACCCC CAACTTCCGCCAACAGAGGCAACACCCAAACCCTTAGACCACTGCGCCAC CCGTACACCATGTGTCGAATTATAGCAAGTACGTGGCGTCGATACATCAA CAACAACAGTTGTGCAGAACGCCCTCCCCACAGAGCAACCGACATCTCCA AGCTTATAGGTCACCTTAGGACATGACTCTCCCGGTACAGTCAGTAGTAG GTATGATACATGATATATATACAACTAACTTGTACCGTAGGAGCTACGAT ACTATATTTCGAGCTACACAACATACTATGTTACTGGTTTTGTAATATTA TAATACTGTCTGTTGTACAACTGGAAGAGTAGTATGACTACAAGTTGCAG TACTTGTAGTACTCATAATTCGAAGTATACGTATATCCGTACTGGCGAAT AGTAAATATATGACAGTGGAACAAAAAAAACGCACACCATCTCTGTACCC CCCCCCCCGGCCTGCAGGGAGTACTCGACCGCCGGAAGGAAGGTACAACG CAGGCCATAGCGTTCCCTATCTCTTCGAAAGCACGATGCGGAGGCAGGTT GGATGTACGGGGCAGGGTATCCAGTGCGGGCGTGGACCGTGCTTTGCACG CACTACGGATATGTCCTCAGGCGGAAACATTGAGGGTTGCATAGACATTG CGGCGACGCAGATTTTTTTTTTCCAGGCACCGTTATCGGTGTGGGTCGGT GATGCTTTGTTGTTGGAGTACGGGGTGGCGGCAAGACGTTAGCGCCGACA CGGCGTTGCGGAACAGCAGCAAATAGCTCGGGGTGGTACAAATACTGTAG CGGGGTGACTCTGGCAGGGATAGCTGGCTACGTATTGAGGACGTGGTTAT TTTTTGTTGTTGGAGTACGGCGTGGCGAGCACACGCGCAAGTGCGGACGA TGTTCCGGAGCAACTGCTATAACTTTGCGTGGTACTGCTGTAGCGGGGTG ACTGGTAGAGGTACCTGGCTAGACAATGAGTACGTGGTTAGTTAGTGCTT GCTTTATCACCCACTACTGGTTTTGCTCAGAAACCAGACAAAGAAGAATA ATCCTCGTGACTGTCAACTAAAAAACCGTGAAAAACCTAACCGAAACGAC CGTTGTGTTGAATAATAATAATTTCCACGTTCACGCCGTGCGGCAAAAAC ACGGCGATCAGGGTAATGGGAATACAACACTCCCCCCGTCGACCAAGAAA ATGATGGATTTCCAACACGGTACTCTGCATCTATCTGCCAGTCTATTTCG CCGCCCCCGCTCCCACTACCGCCACCCCCCACGTCTCCTTTGGGGTGCCA AAAGTCCAGCCTCGACACCAATGTCTTCGACAGTATCATCGTTCTCCGAT ACGCACCCTGCGAGTGGTCGATCAGATGGCGACATAGAGCAGGAGCAACG AAGAAATGTCAAAGCAGTGCAAGAGCAATCTTCAGCCAAACCCTACTCCA CTGTCTGTGCTTCGACTTATATACAGTATTTTGCCAGCATGACAAAAAAA AAAAAAAAACAGTGCACGCATTACGAGCACAACAGATTGAACGCATATAC AACGAGCACACGGAAGCAAACCAACCACACACACATCTCTTCGTACCATA TTATAGTATGATGGAGTAACGTACAACAACAACAGAGTCGTCGTTGATAC ATTCAACTACTACTGTCTGTGCTGTTGTACTACAAGTATACTGCTGTAGA TGGTAAGAGTATGACAACAAAAGGGCATAGAGTCCAGGTACAGTACTGGG TGCTACTCAGCATATTAAAAGCAGTACAAAAGTAGCTTTTTTGGTCATTC CTAGGTTTGCAGTATCAAGTGGTCCTCACGAACTACGATGATTGATTACA ACAATAGGAGTGATAAAGAAGCATCACGACGCCAGCTACCTTTGAGGTCC CCGCGCTTTTCCCGGAAGCACCGAAGTCAAGGCGAACGGTGCACGTCAAC ATCGTGTAATTATTGGGCTTCACCCTGGCCGGTGGTCATATTTGGTGCAC TTTTCGGTAACCCCTACTACTGTATAGAGCACCACGCGTGAGTTCCGTCC TTCCTCAACAACAGTTCCACTGTTTCTCACCAACTAACCCTTCGAGCAAC GACGTTAGTACGCGTAGCATGCGGCGGGGGACCCGTGGTTGCCTTTTCGT GACCCTGAATGACGCCGTGGTGATTCGGTGAGGCTGGTGTTCAATGTACT GCATTATAACATGGACGCATGGTGCAACAACCACTTCTTGAGCCAAGGCT CCTGTTCTACTGGGCAGATCGAGAAAGTTCCTATATCGAATCTGCCCCAA AACACACGGCGAGTCGTATGAGCCGCGAAGATGTGCATCAACCTCTGGGT AATGTACCTAACCGGAAATGGCACCTCGTTTGTAGGGCTTAGTGCAGCCC CAAACCCTTCCCTACCCACTTCCTCGGTCCCAAAAATACATGGATTTCAG TTCTCGTGACACAGTGCACCAAAACCAATCAAATCGCGACAGTCCACATG CATGAGGCCACTGACCGATTTCTCACCTAGTGGGGCCGCCATGTCGCAGC CGATGTCGAGCTTGATGCAGGCTCTGTAACTCGCTCAGCGATTGTCTCCT AACTTGGGGCGATAGCGCTGCTTTCAGCTATAAAATTTAGAGACGCACGG CCTCTGAATGGCTTATTGCAACAGTCCTGCCGTTGAATGCCGTTGAAACC GTCATTTTTTTTTCTCGAAAATTTGCTCGTAAATGAAAAAACGGGGACCA GGGGATGAGAGCGTGGCACTGTGGCCTTAAAAAAAAAAAAAAAAAAAAAA CAGACAGCACAGACACACGTTGCCGCACCTAGCTCGACCAACTGAGAACG ACTTTCCACCCCACCAGGACGAGAAAGTGTCTTTCGTGTGTGTGCGTGCA CAGAGCCGCGGGGACTGAATTTGGTGACGTGTGCGTCGAGCGCAGTGGTG AAATGTGGACAAAAAAAATGTTGAATCACACACACACACAGACACACACA CACACACACACACACACACACACACACACACACACACACACACACACACA CACACACACACACACACACACACACATACAGAACAACTCAAAACAAGGCA CCCTACCCTCGTATCCGAGCCGCTATGAAGAGGCTTTTTTTTCCTTGGAA AACCAATGAAAAAAAGGCTCGCTTCGCTCGCGCGCCTCATTATGATTGTC CCAAATGGCTCATAGGGCACCAAAAAACTGATTATATACTAATAGCGAGT GTTGCGATATTCGCGTATGGACACAGGCGGCATCGTGGTGGCATCGCGAT GCCCGCCGAGAAGAGCCGCGGAGATTCGGGCGTTTTCTCTTCTTTCTGCC CCAAGATACTAAAAAAATACCGAATGGTCCACCGCAAGAGCCAGAGTTCG TGTATTTTACCGTTTTTTGCACGCTCTACAACTACAGTAGTAATAGGCTC CTACACCTCCTACTCATCATCGTCCAGCACGTTTTTCACACTGACCCGAG GCAGGAGAGCAGATACAGATCGATGGCGTGGCGTGTGGGGAGCAGGGCCG TTGAGAGCGACAGTTATTGGGGACAATCACCACGTAGGAAAGAAATCTGG CAAGATACGTCAGAAATGAATAATCATTAGTGTTGGATATCGTATCGAAA GTTTCGATGTATCGTATCGAGTATCGGGGGATTCCTGCATTTCGATACGA TACGATATTTCGATACGATACGATATTTCGATAAAATCACCCACGGAGCC CCCCCAGGTAACGTATGCACGTATGCACACGAAACCCCCAGGACAGCACC GCCGCACGCCGCCTCTGCGTCGCACACTAGCTAGCGCACCCACAGCGCTC AGCGCACACACGCAGGCACGCACGGCACACACCACCCCAAAGGCAACCTC ATAGCAGCTGGATACAAGTAGTGATGTAGTGATAAGCAAGTAGGGATATA GTGATATACGTAGTAGGGATATTGCTTTTTTTTCTCTTCTGCGGGTGGCG AGTTGTGTGCCTAGTGCTTAGACCTAGTGTGCCGTATCTGGAGTCGTTCA CCATTTGTTAGAGCTTCCACTCTCCAGCCGACGAAGATTCGTATCTTGAT GCTGGCATATGTGAGCAGATGTAGTAGTAGAGACTACAATTCCGGGCTTT GAGAATTTGTTTTGGTGGCATGTGCGAATGTGTGGTGCGTGGTGTGTGGT GTGTGGTGTCACGACGTCCACAGCAGTAGCGTAATGTGATACCACGATAC CACGCTACACGCTACACGCCACACTGACTTGGCGCTTGGCAAGGGTTGAA CGTTGACACGGGTTATCCAAGGTGAAACACCGCAAAAAAAAGAAGAAAAC TCCCTTGACTCCACGACAATTGTCATTTTCCCCACATATCCACACTAAAA ACAGCCGGGTGTGTGGCGCAATATATTGTTGTATTTTGATGGGATATGAA GCCAATATGCCCCAAATTTTTTGCCTCCAGCGGCGCCTCCAGCGGGGCCC CCTCACCAGCCGGGGGGGGGCGTTGGGGCTCGCACAGCGAGCTGAGAGCG CATTCGCGCCTCAGCTCGCTGTGCTCGCGGGCTCGCTTCGCTCGCCATAT CGTTTATCGTATCGATATCCAACACTAATAATAATACGTATTGCATAGCT TCATCAACAGCTAAGACGACCATGACGACAACACGCGGTGTCGCACACTA AAAGAGGGGGCGGATGCATAATAAGCAGAGAGGGCTGGCTGGTGTGACTT GGCAGAGTGCCTGCGCTGGCAAAGTACTGGCTAAAGGAGTGCTAGCTAGA GGAGAGATGTTGTCAGATAGATGCGGTGCGCTGTGATACAACAGTAGTAG TTGTAGCTGTACAGGTATACGTAAAGGTATGATAGTATGATACGATACGA GAGACAAAAACAAATGCGGGCAAACTTCGTGACTAGCGACTGTTGGCCCA CTACTATCATATGAAAACACCGAAAATAAAAGAAAAAAACGAAATAACGT AGTCCTGCTGCTGCTGTACAATAATACTGCTATCGGATACCGTGGAACAT TGGCTAGCTGCTTAGTAGATAGGACTATTGATAGGTAGAAACGCCTATAC TACCATTTTGGGGGCGATACCATCGGTATTACCTACGCCTATTTTCCCTT ACTCTTAGGTACGATGTTTCACGCCACCGACACGTTGGGAATTGCGGATT TGCCATCACACCCGTGGCATGCGCCCTAAAATCCTGCGAGCCTGCTAGGC AGTTCACTGCCCGGCAGGCGCCCTTGTACAATACTATCATACTACGAGTA CTACTGTTAATTGTTAATTGTTGTTTGTTGTTGCATTCGTGGCTATCTCT GTCTCTCGCTGTCCTCTTTTGTGCCCCATCATGTCATACTCGTACAGCAG AGAGGTAAATCGGCAGGCGACACAGCTTGCTGTGTGGAAGTATGGTAAGG CCACTGCTTAGGCCATTTCTTATACAGTTGGATTAAATGGATCAAAAAAG GCGATTTCCGATCGGGCTTTTAATCGATGCGAGTTATCTGGCCCTCTTTC TTATCGTCAATCGGATCGAGTTTGTAGTTTTTTAACAGTTTTGAGAAAAG GGGATAGGCTATGATATACGTAGGCGAAAGTCAAGTCGATACTGCTTCGC TGTCTTGCTCGCGGGTTCTAAGAGGTCTTCGTCCCTTAGCAGCTGTGCCC AAGCGCACATACCCATGCCTCGCCTAGCCTCGAGCGACGCGCGCGCTTCA CGCGCGGGGGGTCATCGGCCAAGTCGTCCTCGAGGTTGTGCGCCGTTGGA CTGTCGTCAAGAGACGCCAACGCTACGCCGCCAGAGCATGCAGCTGTTCG CAAGTGCAAGGTCATCGGTACCGCCCGCTGCTGCCATCGGATGATGGTAC GCGGCGAGCAGCACTACCAGCAGTGATAACAGCCAAGCCAGCATCTGGGC TATTTTTGTGTGGAGTATGGTCCGGGTGTGTGTGGATCTATGGTTTGAGT TGTGATGAGAGATGTGTCTACAGTCAGTACGATACTACAACTACAACTGT TGTACTACTGTAGTACAGACAGTAGTATCATACAACAACAAACTATTATA TATACTTCGAAGTATAATATATGAAGCATCTACAACTTTTTCAATCCACG AATCCGATCCGCATTTCGGATCGAAAATATCAGCTTTTTCGATCCTGTGG TCCGATCGGAAAGGAGAATCGAAAAAACTGAGATCGAAAAGGGCCCTTTC CAACTGTATAAGAATGCCATTTTTTGTCTCTGATCGAGAATCGCCTTTTT CGATCCACGAAGTCGACTGTATAAGAAATGGCCTTATGGTACAATAATCT TGAAAAAAATCTTGATCTCAGCCAAGATTTCCTAGAACGAGATTTTTTGT ACACTCGCTATACGAGAAAATCTCCCCTGAAATCTCCGCCAAAATTGTGA GATGGCGGAAATGTTGCTCATTTGGGAAATCTTGGGCTGAGATTTCGAAA ACAAAATGCCCATCGAAATCTCCCAGCGGACAAATTGGTATACTACAACA GTGGTACAGACAGTAGTGTGTACAAGTAGTACTACTACTGTAGCAGTAAC GCGGAATTACAACAAACATCACATCAGGCACGGAAACGATTGTACCTCGG CCGCGGCACTCATGACCACCGTGGCAGCTGCCGCCCTGACCTCTCTGTAG ATAGATCATGAGGCTGGGCCTGGCCGAGGTGTTGGACCAAATTCGCACCG TATGAGAGCTGCATGTACCTTCAGCGAAAAGCGCGGCATTGCGGTGTGCG ACGTTTTGGGTTACCGCTGTCTTGGGCCAATGCCTCACCATGTCGATCAA CCAGGTGCAAAGCTCGCAAGGGACACGAAAGGGCCCCGTGGACTCTTTGG GCATCCTTGCAGTGGGGTCAAGCATTCATTTTTTCTAGCACCATGCACTC CCCATGCGGGAGCTGTCTCAATCGGGTCTTGGCTTGGGCACGCGGGTCGT TTTGCTGCTTGATTTGAGTTCTTCTGTTGTCAATAAACTCGGTGACAAGT TTATGACAACTGCAGATGGTGATGACTCAAGTCAAGCGAAGCGGCCCGCC CGCCGTGCTACCCACGGTTCGACTCAGTTACCCATGCGCGGGGAGTGGTG CTAGAAAGATGGAATGCTTGATCCCGATTGCAACGAAGGCAAAGAGCTAC TCGTACGGGGACGATTTTTTTCGTGTCAATTGGGATTTTTGTGTTTCGTT GATCGACATGGCGAGGCGGTGGTACCTTGGACGTCGCACACTGCAATGCC GCATCCGCCTGAAGGCACATGTAGCGGCGTGCATGTTGTGAGCTCGTTGA GCTCTCTACAACAGTAGTGTGAATATCGTGGTTGCAGCAGCAGTGTGTAG CGTGTCGGGCGACCTCCTGTTGCGCACGTGCACAGAGATGTTTGCTGTTT CTATTTTTCTATACAACAGTAGTATAACAGCACCTCATCATTATGATGAC AGGCTCCACATTAATTTTAGTACATACAGCAGCCCCATTTTCTACCAGAT CCACTCTACTCGTATGATATCTGAATCGAAGATTTTTAGCCCATAAATTT AGCATTGTGTCAGAAATCTTGACGTGTAAATCTCAATCTTCGGTTGTCAA ATATATCTTGTAGAAGATTCTTGTCAAGATTTTTTCCCTATAAGCAGTGG CCTAAGCTTAAGTTTTACTCGAGGAAACCCAAAAATGTTTCTTATGTATG CTGTCCTCTCTTACCATCGCAAGTCGCAACCCTTTTTGTTTCATCGATCA AGAACAGATTTCTTATTATAGTTCACCTTTCTTTGCTTTTGTCTGCATGA TGTCTTGCCCAAAATACATACCAAAAAAAGGTGATGTGATTATGGTCGGG GGGGTATCGGCCGGTATCGCGGCAGTGCAGCGGTACCATCGAAAAAAGCT CCTCGAAGAGGAAGGCCTGAATAGCAGAGGAGCCTCTACCGCAGCGACGG CTTGGAGCGCCGCGCCCATGCCGGGTGGGGGTGGAACTGCCGAGATATCA ACCCTACAGCTAGCAATGTATTGCGATCGCCGCGGAGGACAGCGAGACGT CTTGGACACGCTGAACAAGCTGTCGCAGACCGCCGACGTTAACAGTCCTC GCGGGTTGTCGACCCTTGTGAATGAGGTGAGGTGAGGTTCCCGGCTGTTA CGCTGTTTTGGGGAGGATTGGTAGGTGTCGTTGATTACGTCAGTGTATGA TGGGGTGACGCTCTACAGTAGTCCAAGCGGTTAGATTGTCACCTCTGTTG GCGGAAATTCGGGGTTCGATTCCCGTTGAAACGAAAATGGCGCTTTTCTG TGCCGTCTTGCGTCGCGGAAAGCGCGAGAGCGCGAGTAAGCACAATTCAA TGAAAGTCAACGAGGGAAGAAAGTACTGCGCTATTCTCGCGATAGAAACA ATGGTTGGCATGTACCGAGGGGGGAGAAGGGAAGATTCCTGTGACCACGG GTTGCTCAGGCAGGCGCGCTAAGGGATGAGTACAGAAGAGCTCTTGTGAA CTGGACCACGGGGAATTGTATAGTGATGGATAAAAACTATAAAATACAAT AAGCATGATAGTTCTTGGTAAGGCTTCCATCTCGGTGTACCTTTCTTTGT CATTGCTGTTGTTTGTTTCATCGGAGCGTCTCTTATCTATCGCATGCGGA CGTCGCCCGACTTTGCGACCTGTGCCCCGCCGTATATACTTGTATGCTGC AACGCACCTGTACCCTATCGGGCTATTTCTCTTATCACCGCGTGTGCCTT TCGTGTTTTCCCTCCTGGATCCTTCGGTGAGAGGAAGGTAGCGAAAACTA TTCTTCCTACTCATATCGTATCGTGGATACCTGTGCTGGTTATGTCAACC CACCACTTCCCCATGTCCCCCTGTGGCATTTTCCACCCGAAACGCCGCAG ACACAATCGCATGTTTCGAGTTTATGCGCACCACGCTATCGCAGGTTGAC ATATCACCAGATCATTAGGTGCTGCAAGAGGTTCCAAAAACGCTTCAGGC ACGGGTTCGCTCGCGAACGAATCCCCTGACTCAATCAACACGCACACGTC CGCGATAGCTTGCTTGATCTTTTTCAAAACTGCTCCCCCCAAGATTCAGT TTACGAGTTCAAGAAGCATGTTTGCTACCGCTGTACCCGTTCGGGTGTTG TTGATACAGGTTGTGAACCTGACGCGCATGTTTCCCTCTCCGTGTGCCCA CTCTGTAGGTGTGTCTAGCGCTGCTGCGGTCAGAACGAGACTGGATAGGG TCGATGGGATCTATTAAGGAGTATCCCCGCGAAGGTGAGCTATCACGAAG GCTGTGCCCCGGTGTCGCTCTTGTGCCCTTGCATGCCATAACGACTTTTG CGAACTCATTAACAGCTCTATGCCATGTTTATTTGGCGTTGCAACTCAAA CCACGAGGTACTCTCTTCCACATTTTTTATTTTCCCGGTGCATTCCTCAT CGCCCGTGTCTTTTTGTTCCAGGCAGTAGTGCAGGCGGCAGAGGGGCGCG TAAGAAGGGCAGTCCGAGGATGAGAGCCAAGCGTGACTTCAATCGTTTCG TCATGCGCGAGCGATCCAAGTGGGAGCGCGAGACGGTGTCCAATACTCCA GAGCGAGGTTTTAGCAGTAGCATGGCGCCGGGGTGGAGAGAAGATGGTAA GGACGGCGGCACGTATGCGGTGGCGACCCTGATGATCGCTTGGGCAGGGC TGAGAAGCACCCCTCCTCGAACACAAAAGAGAGAACGCGCTTGGTTTTGG CAAGATGACAACCGGGACCGAGAGGACCGAGATGTCGTATTTTCCGTCAC GAACAGGTGGGTGTGGAATGCCGTAATTTTCTTTTGGTGGCGGGACTTTC GTTTTTTGTTGGCTAGACGAGATGGTTGTGTGTGAGTTGGAACGAGCTGC TGTACTTGCAACATACGACGCGTATTAAAGCCCGGTGGCTAGTCGACGGT GGCTTTTGGCCCCTTGCACACGCTAGCCCGCACGGTGCGTGTGATGTATA TGGGCATTGACGCATGTCATGTTCACTGCGTATGAGGGGATGAGTTACGT TGGACTCCGGAGTCTTGGTGAGAATAGGTTGGAACAGGAACACCCGCCTT GATCCACGATGTGCTTCCATAATTTTGTTATTACCAGGTAGGGTATGTTG TATCAGTTGCGTTGTATCGACAGGATCACTTAGTTACACGCCAAAATATT TCCTCCAACCTTTTGCAGTCGTTTCCGGCTGGTAAATTTTTGTGTCAACC AACGATAGAGCGGTCAGTGCTCACGCGTTTATTGTGTTGCGCCGCACGCT GGTGTCGGAGAATACTGAACAACGGTGGTGCCATAAAAGTTCAAGGGGAA GTAGCATTTGGACAATCGATAGTACGCCCGCCACGGCGAGCTGTATACGG CGAATATCCACTCCGGTAGCACCATATCACAGTGCACGTCGAACACGGGT ATCATATCGAGCGCCCGAAACTCGTGTGCTCTGTAGCTTGACTGACGTTC TCAGTGCGCTGTGTGACGACATGCACGATTTTTTTAGGGTTTTCATAGTA GTCCCACAGGGCGACGCGCAACGCTACGCTCTCGGGCACCAGTGCATGCG GCATCGTGGCTGCTGCCGCTCTATCGTACTTCTGACAGGTTTACGGGCGC TAGAGCTATCGGAGATCACAACAGTTGCGTGTGTTTTAGTAGTCTTCGCG CGCGGCAAAGCCTTCCTCAGGGCTGTCGTAGCCCATAGCCTTGGAGGCGC CCAACGTTTGTACACGAGATTCTTGTTCTTGTTTTTGACGCAACCAGAAT TTACGCTGAACTCACCACCCTTTGGGAGGAGGGGGGGGGGGGGTACGCTT TTGTCGACATGCCGATTTTCTACATGCCTTCGCGATAACGTTTCATCTAC CAACCATAGCAAGCTGTTGTTTCTGTGTTCCGTTGAACGTGAGTTCCGCA AGGCCCGTCTGCTGTTGGATGAAGAAACTGTGCTGTGCGATGATTCAAAG TGATGCCGACCACTTGCCACTTGCAGTCCTTTCCCGGCATCACTTGTGGG AAGCGCTTTCAGTTCCCGCTTTCACTCTTACTGACGATGCAAACGTTCTG ACTACGTAAATATCTCGTAACTGGTACACAGCTACTATATGCGAGAAATG CGTCAAACCACCGTTGTCATCGTTGCCAACCAAATGGGCCTTCGTGGTTT ATTTTTCCTTTCGCGCCTAACAGAAAGTCGACCATGGCTCTTCTGGAGTG GCTAGGAGACGAGGCCGCGGAAGGGCGAGGAGAAAACGTTTTGGACGTGG AGGTTCTTTGGACTCCCGCAGATCCTGACGATTCCCTCGACAGGGACGCT CTAGACACCAAGTGGCCCGAACTCAGAGCACTTTGATTTGGGTACAGTTA ACGTTTAGCACGCTCCCGTGTCGCTTGTAGGCTTACGTTGGGGGTGGCTC TTACTTATGTGGCAGTTTTTTAGTAACTTGTATAGACGGTTTAACTGTAG TAGTGCATTAAACGGTACACGGACATAATCGGAACTGCTGTATGTAGTGG AAGCATCGCTCTCTGCGATAACTCTTAATAGTATCGAATGTTGTACAGTA ATAATAATAGAGAATGCAGAGTTAAATCTTGTTCTGTGGAGAGACTCTGT GGTCCGGGGTGGCAGCAAGATTTTGAATTCATACGGACAAGTCGCGCCAC TACTGTATGACACAGCGTTGTTGTTTTGGTTTGTAAGTGTGTGTAGCTGT GGGACAAGGAGGGGGTCTGGTAATAAGAGGCGACCATCGCCAGGAGCTAA TGTTTTAGAAAAATGGCCTGTACTTGTAGTCGATGTCATAGATAGGTCAT CTTGCAGCACGCTACGTCTTACAAACCGTAGTACAATAGTAATGTGTTAT TTGGGCACCACCACAGTCAACGTTGCTTCTTCCAGCGTTCTGCACGACAG GTGTAGATATGTCAGAGCGATAGATGCGATGGCAGGTTGACACGGCGGGT GATACAGAATGCGTAAGAATACTTTTTTGTATTGACAGTGTAACCTTGAA GCAAACGCCTGTCTTGAAACGATCCTCACTCACACACGATACG
back to top

Coding sequence (CDS) from alignment at D-herbacea_F_contig1069:6705..20447-

>mRNA_D-herbacea_F_contig1069.658.1 ID=mRNA_D-herbacea_F_contig1069.658.1|Name=mRNA_D-herbacea_F_contig1069.658.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2274bp|location=Sequence derived from alignment at D-herbacea_F_contig1069:6705..20447- (Desmarestia herbacea DmunF female)
ATGGCCGCTGTAACTGGAGGAAGGATAGGGGGGGGCTACAGCGTCCCCGA
ACAGGCCCCAAGCGCCCCTCCCATACAACGACAGCAGCAGCAGTACCGGC
CTCAGGCTCCTCAGCAGTACGGCCCACCACGGGCGGGGCGCGACATATTC
GGTAGCGATGGCAGCCGCGTTCACATCAAATTCTCGGGGAATGGAGGGAG
ACGAAGGGGGAGCCGTGCAAGATTCAACCCGGACGTCGGCGACGTGACGT
CCAACACCATCACGCCTGATGGCCGCTGTAACTGGAGGAAGGATAGGGGG
GGGCTACAGCGTCCCCGAACAGGCCCCAAGCGCCCCTCCCATACAACGAC
AGCAGCAGCAGTACCGGCCTCAGGCTCCTCAGCAGTACGGCCCACCACGG
GCGGGGCGCGACATATTCGGTAGCGATGGCAGCCGCGTTCACATCAAATT
CTCGGGGAATGGAGGGAGACGAAGGGGGAGCCGTGCAAGATTCAACCCGG
ACGTCGGCGACGTGACGTCCAACACCATCACGCCTGGTGATGTGATTATG
GTCGGGGGGGTATCGGCCGGTATCGCGGCAGTGCAGCGGTACCATCGAAA
AAAGCTCCTCGAAGAGGAAGGCCTGAATAGCAGAGGAGCCTCTACCGCAG
CGACGGCTTGGAGCGCCGCGCCCATGCCGGGTGGGGGTGGAACTGCCGAG
ATATCAACCCTACAGCTAGCAATGTATTGCGATCGCCGCGGAGGACAGCG
AGACGTCTTGGACACGCTGAACAAGCTGTCGCAGACCGCCGACGTTAACA
GTCCTCGCGGGTTGTCGACCCTTGTGAATGAGGTGATGTGATTATGGTCG
GGGGGGTATCGGCCGGTATCGCGGCAGTGCAGCGGTACCATCGAAAAAAG
CTCCTCGAAGAGGAAGGCCTGAATAGCAGAGGAGCCTCTACCGCAGCGAC
GGCTTGGAGCGCCGCGCCCATGCCGGGTGGGGGTGGAACTGCCGAGATAT
CAACCCTACAGCTAGCAATGTATTGCGATCGCCGCGGAGGACAGCGAGAC
GTCTTGGACACGCTGAACAAGCTGTCGCAGACCGCCGACGTTAACAGTCC
TCGCGGGTTGTCGACCCTTGTGAATGAGGTGTGTCTAGCGCTGCTGCGGT
CAGAACGAGACTGGATAGGGTCGATGGGATCTATTAAGGAGTATCCCCGC
GAAGGTGTGTCTAGCGCTGCTGCGGTCAGAACGAGACTGGATAGGGTCGA
TGGGATCTATTAAGGAGTATCCCCGCGAAGGCAGTAGTGCAGGCGGCAGA
GGGGCGCGTAAGAAGGGCAGTCCGAGGATGAGAGCCAAGCGTGACTTCAA
TCGTTTCGTCATGCGCGAGCGATCCAAGTGGGAGCGCGAGACGGTGTCCA
ATACTCCAGAGCGAGGTTTTAGCAGTAGCATGGCGCCGGGGTGGAGAGAA
GATGGTAAGGACGGCGGCACGTATGCGGTGGCGACCCTGATGATCGCTTG
GGCAGGGCTGAGAAGCACCCCTCCTCGAACACAAAAGAGAGAACGCGCTT
GGTTTTGGCAAGATGACAACCGGGACCGAGAGGACCGAGATGTCGTATTT
TCCGTCACGAACAGGCAGTAGTGCAGGCGGCAGAGGGGCGCGTAAGAAGG
GCAGTCCGAGGATGAGAGCCAAGCGTGACTTCAATCGTTTCGTCATGCGC
GAGCGATCCAAGTGGGAGCGCGAGACGGTGTCCAATACTCCAGAGCGAGG
TTTTAGCAGTAGCATGGCGCCGGGGTGGAGAGAAGATGGTAAGGACGGCG
GCACGTATGCGGTGGCGACCCTGATGATCGCTTGGGCAGGGCTGAGAAGC
ACCCCTCCTCGAACACAAAAGAGAGAACGCGCTTGGTTTTGGCAAGATGA
CAACCGGGACCGAGAGGACCGAGATGTCGTATTTTCCGTCACGAACAGAA
AGTCGACCATGGCTCTTCTGGAGTGGCTAGGAGACGAGGCCGCGGAAGGG
CGAGGAGAAAACGTTTTGGACGTGGAGGTTCTTTGGACTCCCGCAGATCC
TGACGATTCCCTCGACAGGGACGCTCTAGACACCAAGTGGCCCGAACTCA
GAGCACTTTGAAAAGTCGACCATGGCTCTTCTGGAGTGGCTAGGAGACGA
GGCCGCGGAAGGGCGAGGAGAAAACGTTTTGGACGTGGAGGTTCTTTGGA
CTCCCGCAGATCCTGACGATTCCCTCGACAGGGACGCTCTAGACACCAAG
TGGCCCGAACTCAGAGCACTTTGA
back to top