mRNA_D-herbacea_F_contig105.566.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig105.566.1
Unique NamemRNA_D-herbacea_F_contig105.566.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
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BLAST of mRNA_D-herbacea_F_contig105.566.1 vs. uniprot
Match: D8LSE1_ECTSI (Nitrite transporter NAR1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSE1_ECTSI)

HSP 1 Score: 414 bits (1065), Expect = 3.150e-140
Identity = 210/277 (75.81%), Postives = 242/277 (87.36%), Query Frame = 1 
Query:    1 ATTLKPVEAALLA-RGGDVKPPPALYTNAVEIGAKKAAGSARDTFLLGVISGCHIAFGGLLAITVGGALPGMKSANPGLQKLLFGIFGLPFGLYMVLTSGGELFTGNTALVTAAVIEGKATIKNLLKNWSVSYTGNLIGSLLLAKVVMHAGLNAVPASAAAITVSKVAKPFFETFLKGMVCNWMVCMAVWVATGASSLTEKYLAMVLPVSAFVAFGAEHSVANMFLLPLGLLSGASESVSWMDIATKNILPVTLGNIVGGAVCQAGLYSAVYGSLLK 828
            A  LKPVEA L A RGG VKPPP LY NAV++GA+KAA S  D  LLG++SG HI FGGLLA+TVGG++P +KSANPGLQKLLFG+FGLPFGL+MVL +GGELFTGNTALVTAA++EGKAT+ NL+KNW+ S+ GNL+GS+LLAK+V+ AG+NA P +AAAI VSKV+ PF  TFLKG+VCNWMVCMAVWVA GA+SLTEKYLAM+LPVSAFVAFGAEHSVANMFLLPLGL SGAS+SVSW D+  KNILPVTLGNIVGGA+CQ   Y+AVYGSLLK
Sbjct:   53 AGVLKPVEAVLQAPRGGLVKPPPGLYANAVDLGARKAAASPVDIVLLGILSGFHIGFGGLLAVTVGGSIPAIKSANPGLQKLLFGLFGLPFGLFMVLVAGGELFTGNTALVTAALVEGKATVANLVKNWTCSWAGNLLGSVLLAKLVVAAGINAAPGTAAAIAVSKVSSPFLPTFLKGIVCNWMVCMAVWVAAGATSLTEKYLAMILPVSAFVAFGAEHSVANMFLLPLGLFSGASKSVSWQDLFVKNILPVTLGNIVGGALCQTMPYAAVYGSLLK 329
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BLAST of mRNA_D-herbacea_F_contig105.566.1 vs. uniprot
Match: A0A835ZQ31_9STRA (Formate/nitrite transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ31_9STRA)

HSP 1 Score: 337 bits (865), Expect = 4.850e-111
Identity = 169/257 (65.76%), Postives = 204/257 (79.38%), Query Frame = 1 
Query:   58 PPPALYTNAVEIGAKKAAGSARDTFLLGVISGCHIAFGGLLAITVGGALPGMKSANPGLQKLLFGIFGLPFGLYMVLTSGGELFTGNTALVTAAVIEGKATIKNLLKNWSVSYTGNLIGSLLLAKVVMHAGLNAVPASAAAITVSKVAKPFFETFLKGMVCNWMVCMAVWVATGASSLTEKYLAMVLPVSAFVAFGAEHSVANMFLLPLGLLSGASESVSWMDIATKNILPVTLGNIVGGAVCQAGLYSAVYGSLLK 828
            PP ALY NAV IG KKAA +    F L V+SG HIAFG LLA+ VG  +  MK+ NPGLQKL FG FGLPFGL+MVL +GGELFTGN A+V+AA  EGKA+++ LLK+WS+S+ GN IG++L+ K+++ AG+  VPA A  I V+KVAKPF  TFL+G+VCNWMVCMAVWVA+G S+L EKYLAMVLPVSAFVAFGAEHS+ANM L+PLG+  GA   V W+D  TKN+LPVTLGNIVGGA+CQA  Y +VYG+L K
Sbjct:    2 PPAALYANAVAIGEKKAAAAPATIFKLSVVSGAHIAFGALLALVVGANVANMKTLNPGLQKLFFGAFGLPFGLFMVLVAGGELFTGNVAMVSAAFFEGKASLEGLLKSWSISFIGNFIGTILVCKLIVAAGMLTVPAIATEIAVAKVAKPFLTTFLRGIVCNWMVCMAVWVASGCSTLGEKYLAMVLPVSAFVAFGAEHSIANMALIPLGMAGGAK--VKWIDFLTKNLLPVTLGNIVGGALCQAAPYGSVYGTLGK 256
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BLAST of mRNA_D-herbacea_F_contig105.566.1 vs. uniprot
Match: D7G4R6_ECTSI (Nitrite transporter NAR1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4R6_ECTSI)

HSP 1 Score: 311 bits (798), Expect = 1.110e-99
Identity = 156/273 (57.14%), Postives = 196/273 (71.79%), Query Frame = 1 
Query:    4 TTLKPVEAALLARGGDVKPPPALYTNAVEIGAKKAAGSARDTFLLGVISGCHIAFGGLLAITVGGALPGMKSANPGLQKLLFGIFGLPFGLYMVLTSGGELFTGNTALVTAAVIEGKATIKNLLKNWSVSYTGNLIGSLLLAKVVMHAGLNAVPASAAAITVSKVAKPFFETFLKGMVCNWMVCMAVWVATGASSLTEKYLAMVLPVSAFVAFGAEHSVANMFLLPLGLLSGASESVSWMDIATKNILPVTLGNIVGGAVCQAGLYSAVYGSL 822
            +T  PV A  +A    VKPPP +Y NAV+IG KKA+GS    FL+G+ISGCHI FG LLA+++GG  PG+ + NPGLQK++FG FGLPFGL+M +  GGELFTGNTA+VTAAVIEGKA+I  LLKNW  SY GN +GSLLL  + +  G+   P SA  I  +K +  F + F +G++CNW+VCMAVW++  AS    K+ A+ LP+SAFVA G +HSVANMFL+PLG+  GA   V+W      N+LPVTLGNIVGGAV   GLYS  +GSL
Sbjct:   71 STTAPVSA--VASAPSVKPPPQMYQNAVDIGQKKASGSVAKLFLMGIISGCHIGFGALLAVSIGGNCPGLLATNPGLQKIIFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAVIEGKASIGGLLKNWVFSYLGNFVGSLLLVFLAVQGGVVVNPGSAMGIATAKTSLTFVQAFARGILCNWLVCMAVWMSVSASDAAGKFFAIFLPISAFVALGLDHSVANMFLIPLGMALGAG--VTWSQFLLANLLPVTLGNIVGGAVAVCGLYSGAFGSL 339
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BLAST of mRNA_D-herbacea_F_contig105.566.1 vs. uniprot
Match: B8BXN4_THAPS (Formate/nitrite transporter family member n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXN4_THAPS)

HSP 1 Score: 292 bits (747), Expect = 4.720e-93
Identity = 148/261 (56.70%), Postives = 191/261 (73.18%), Query Frame = 1 
Query:   49 DVKPPPALYTNAVEIGAKKAAGSARDTFLLGVISGCHIAFGGLLAITVGGALPGMKSANPGLQKLLFGIFGLPFGLYMVLTSGGELFTGNTALVTAAVIEGKATIKNLLKNWSVSYTGNLIGSLLLAKVVMHAG-LNAVPASAAAITVSKVAKPFFETFLKGMVCNWMVCMAVWVATGASSLTEKYLAMVLPVSAFVAFGAEHSVANMFLLPLGLLSGASESVSWMDIATKNILPVTLGNIVGGAVCQAGLYSAVYGSLLK 828
            D+K PPA+Y  AV  GA KA+ S    F LG+ +GCHI FG  LAITVGGA P +  ANPGLQK++FG FGLPFGL M L +G ELFTGNTALVTAAV+EGK T K+L+KNW  SY GN++GSL+LA +   +G L   PAS A I  +K + PF   F++G++CNW+VCMAV++A+G +SL  K +A+  P+SAFVA G +HSVANMF++PLG++ GA  +V   D  TKN++PVTLGNIVGGA+C  G+Y + +G   K
Sbjct:   10 DLKAPPAIYEGAVAAGAAKASASWEKIFKLGIAAGCHIGFGSYLAITVGGACPQIAEANPGLQKIIFGAFGLPFGLIMTLVTGAELFTGNTALVTAAVMEGKTTTKDLIKNWVASYAGNVVGSLILAYLAFKSGTLGNAPASVA-IATAKCSLPFETAFVRGILCNWLVCMAVYMASGCASLAGKMVAVWFPISAFVALGLDHSVANMFIIPLGMMRGAQITVG--DFITKNLIPVTLGNIVGGALCVMGIYGSAFGKWFK 267
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BLAST of mRNA_D-herbacea_F_contig105.566.1 vs. uniprot
Match: A0A6U5HVT6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5HVT6_9STRA)

HSP 1 Score: 288 bits (738), Expect = 8.380e-91
Identity = 150/275 (54.55%), Postives = 200/275 (72.73%), Query Frame = 1 
Query:   28 ALLARGGDV----------KPPPALYTNAVEIGAKKAAGSARDTFLLGVISGCHIAFGGLLAITVGGALPGMKSANPGLQKLLFGIFGLPFGLYMVLTSGGELFTGNTALVTAAVIEGKATIKNLLKNWSVSYTGNLIGSLLLAKVVMHAG-LNAVPASAAAITVSKVAKPFFETFLKGMVCNWMVCMAVWVATGASSLTEKYLAMVLPVSAFVAFGAEHSVANMFLLPLGLLSGASESVSWMDIATKNILPVTLGNIVGGAVCQAGLYSAVYGS 819
            ALL+RGG +          KPP +LY  AV  GA KA+      F LG++SG HIAFG  LA+TVGGA PG+ S+NPGLQK++FG FGLPFGL M L +GGELFTGNTALVTAA  EGK ++ +L+KNWS SY GN +GSLLLA +    G L + PASAA I  +K + PF   F++G++CNW+VCMAV++A+G S++  K +A+  P+SAFVA G +HS+ANMFL+PLG++ GA  +++ M +  KN++PVTLGNIVGGA+C AG + + +G+
Sbjct:   56 ALLSRGGALQMSDAPPPALKPPASLYQGAVAAGAAKASAPFGKIFKLGIVSGAHIAFGAFLAVTVGGACPGLASSNPGLQKIIFGSFGLPFGLIMTLITGGELFTGNTALVTAAYAEGKTSMSDLIKNWSASYLGNFVGSLLLAYLAYTGGTLGSAPASAA-IATAKCSMPFLTAFVRGILCNWLVCMAVYMASGISTMGGKMVAVYFPISAFVALGLDHSIANMFLIPLGMMRGAEVTIAQMFM--KNLIPVTLGNIVGGALCVAGGFGSAFGN 327
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BLAST of mRNA_D-herbacea_F_contig105.566.1 vs. uniprot
Match: A0A448ZQ46_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQ46_9STRA)

HSP 1 Score: 284 bits (726), Expect = 2.700e-89
Identity = 143/257 (55.64%), Postives = 190/257 (73.93%), Query Frame = 1 
Query:   49 DVKPPPALYTNAVEIGAKKAAGSARDTFLLGVISGCHIAFGGLLAITVGGALPGMKSANPGLQKLLFGIFGLPFGLYMVLTSGGELFTGNTALVTAAVIEGKATIKNLLKNWSVSYTGNLIGSLLLAKVVMHAGLNAVPASAAAITVSKVAKPFFETFLKGMVCNWMVCMAVWVATGASSLTEKYLAMVLPVSAFVAFGAEHSVANMFLLPLGLLSGASESVSWMDIATKNILPVTLGNIVGGAVCQAGLYSAVYGS 819
            ++KPPP+LY  AV  G  KA+ +  D F LG++SGCHIAFG  LAITVGGA  G+ + NPGLQK++FG FGLPFGL M L +GGELFTGNTALVTAA  EGK + K+L+KNW  SYTGNL+GSLLLA +   +G  A   ++AAI  +K + P+   F++G++CNW+VCMAV++A+G +S+  K  A+  P+SAFVA G +HSVANMF++PLG+L GA  ++       KN++PVTLGNIVGGA+C    + +V+GS
Sbjct:   53 ELKPPPSLYQGAVAAGVGKASKTWGDIFKLGIVSGCHIAFGAYLAITVGGACSGIAAENPGLQKIIFGSFGLPFGLIMTLVTGGELFTGNTALVTAAYKEGKISGKDLIKNWVSSYTGNLVGSLLLAYLAYKSGTLAASPASAAIATAKCSLPWDVAFVRGILCNWLVCMAVYMASGCASMAGKMTAVYFPISAFVALGLDHSVANMFIIPLGMLRGADITIK--AFLMKNLIPVTLGNIVGGALCVMAPFGSVFGS 307
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BLAST of mRNA_D-herbacea_F_contig105.566.1 vs. uniprot
Match: A0A6S9B5G3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9B5G3_9STRA)

HSP 1 Score: 283 bits (725), Expect = 3.140e-89
Identity = 150/272 (55.15%), Postives = 188/272 (69.12%), Query Frame = 1 
Query:   25 AALLARGGD----VKPPPALYTNAVEIGAKKAAGSARDTFLLGVISGCHIAFGGLLAITVGGALPGMKSANPGLQKLLFGIFGLPFGLYMVLTSGGELFTGNTALVTAAVIEGKATIKNLLKNWSVSYTGNLIGSLLLAKVVMHAGLNAVPASAAAITVSKVAKPFFETFLKGMVCNWMVCMAVWVATGASSLTEKYLAMVLPVSAFVAFGAEHSVANMFLLPLGLLSGASESVSWMDIATKNILPVTLGNIVGGAVCQAGLYSAVYGSLLK 828
            AAL   GGD    +KPP ALY  AV  GA KAAGS    F LG++SGCHI FG  LA+TVGGA P + SANPGLQK++ G FGLPFGL M L +GGELFTGNTALVTAAV EGKAT ++L KNW  SY GN +GSLLLA +   +G      +A A+  +K + PF   F++G++CNW+VCMAV++A+G +SL  K  A+  P+SAFVA G +HSVANMF++PL +L GA  +V   D+  KN++PVTLGNIVGGA      +   +G   K
Sbjct:   35 AALRMSGGDAVPDLKPPAALYEGAVAAGAAKAAGSWEKIFKLGIVSGCHIGFGAYLALTVGGACPAIASANPGLQKIILGAFGLPFGLIMTLVTGGELFTGNTALVTAAVAEGKATKQDLAKNWIASYAGNFVGSLLLAYLAFKSGTLGDAPAAVAVATAKCSLPFDVAFVRGILCNWLVCMAVYMASGCTSLVGKMTAVWFPISAFVALGLDHSVANMFMIPLAILRGAEITVK--DMFVKNLIPVTLGNIVGGAFFVMAPFGTTFGKWFK 304
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BLAST of mRNA_D-herbacea_F_contig105.566.1 vs. uniprot
Match: A0A7S2UWW2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWW2_9STRA)

HSP 1 Score: 283 bits (725), Expect = 3.570e-89
Identity = 146/266 (54.89%), Postives = 190/266 (71.43%), Query Frame = 1 
Query:   28 ALLARGG---DVKPPPALYTNAVEIGAKKAAGSARDTFLLGVISGCHIAFGGLLAITVGGALPGMKSANPGLQKLLFGIFGLPFGLYMVLTSGGELFTGNTALVTAAVIEGKATIKNLLKNWSVSYTGNLIGSLLLAKVVMHAGLNAVPASAAAITVSKVAKPFFETFLKGMVCNWMVCMAVWVATGASSLTEKYLAMVLPVSAFVAFGAEHSVANMFLLPLGLLSGASESVSWMDIATKNILPVTLGNIVGGAVCQAGLYSAVYG 816
            AL  RGG   ++KPPPALY  AV  GA KA+GS    F LG++SGCHI FG  LAI++GGA P + +ANPG+QK++ G FGLPFGL M L +GGELFTGNTALVTAAV+EGK T K+L KNW  SY GN +GSL+LA +   +G       A  I  +KV+ PF   F++G++CNW+VCMAV++A+G SS+  K  A+  P+SAFVA G +HSVANMF++PLG+L GA  ++  M +  KN++PVTLGNIVGGA+C    +   +G
Sbjct:   41 ALDVRGGQAPELKPPPALYEGAVAAGAAKASGSWAKIFKLGIVSGCHIGFGAYLAISIGGACPQIAAANPGVQKMILGAFGLPFGLIMTLATGGELFTGNTALVTAAVLEGKTTKKDLAKNWISSYLGNFVGSLILAYLAFKSGTLGDLPGAVNIATAKVSLPFTVAFVRGILCNWLVCMAVYMASGCSSMIGKMTAVWFPISAFVALGLDHSVANMFIIPLGMLRGADITIGQMFL--KNLIPVTLGNIVGGALCVMAPFGTTFG 304
[Close]
BLAST of mRNA_D-herbacea_F_contig105.566.1 vs. uniprot
Match: A0A7S2AA06_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2AA06_TRICV)

HSP 1 Score: 281 bits (720), Expect = 2.080e-88
Identity = 149/277 (53.79%), Postives = 192/277 (69.31%), Query Frame = 1 
Query:   16 PVEAALLARGGD-----VKPPPALYTNAVEIGAKKAAGSARDTFLLGVISGCHIAFGGLLAITVGGALPGMKSANPGLQKLLFGIFGLPFGLYMVLTSGGELFTGNTALVTAAVIEGKATIKNLLKNWSVSYTGNLIGSLLLAKVVMHAG-LNAVPASAAAITVSKVAKPFFETFLKGMVCNWMVCMAVWVATGASSLTEKYLAMVLPVSAFVAFGAEHSVANMFLLPLGLLSGASESVSWMDIATKNILPVTLGNIVGGAVCQAGLYSAVYGSLLK 828
            P+  AL   GGD     +KPPPALY  AV  G  KA+GS    F LGV+SGCHI FG  LAITVGGA P + +ANPGLQK++ G FGLPFGL M L +GGELFTGNTALV AA +EGK T K+L+KNW  SY GN +GSL+LA +   +G L   PAS A I  +K + PF   F++G++CNW+VCMAV++A+G S++  K  A+  P+SAFVA G +HSVANMF++PL ++ GA  +++  D+  KN++PVTLGNIVGG +C    +    GS  K
Sbjct:   36 PISTALRMSGGDGPPPPLKPPPALYQGAVAAGVAKASGSWEKIFKLGVVSGCHIGFGAYLAITVGGACPQIAAANPGLQKIILGAFGLPFGLIMTLVTGGELFTGNTALVGAARLEGKTTTKDLVKNWVASYIGNFVGSLILAYLAFKSGTLGNAPASVA-IATAKCSLPFDVAFVRGILCNWLVCMAVYMASGCSTMIGKMTAVWFPISAFVALGLDHSVANMFMIPLAMMRGAEITIA--DMFVKNLIPVTLGNIVGGLLCVMAPFGTTMGSWFK 309
[Close]
BLAST of mRNA_D-herbacea_F_contig105.566.1 vs. uniprot
Match: A0A7S2DZW8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2DZW8_9STRA)

HSP 1 Score: 279 bits (714), Expect = 1.400e-87
Identity = 142/253 (56.13%), Postives = 182/253 (71.94%), Query Frame = 1 
Query:   70 LYTNAVEIGAKKAAGSARDTFLLGVISGCHIAFGGLLAITVGGALPGMKSANPGLQKLLFGIFGLPFGLYMVLTSGGELFTGNTALVTAAVIEGKATIKNLLKNWSVSYTGNLIGSLLLAKVVMHAGLNAVPASAAAITVSKVAKPFFETFLKGMVCNWMVCMAVWVATGASSLTEKYLAMVLPVSAFVAFGAEHSVANMFLLPLGLLSGASESVSWMDIATKNILPVTLGNIVGGAVCQAGLYSAVYGSLLK 828
            LY  AV  GA KA+GS    F LGV+SGCHIAFG  LA+TVGGA P +  +NPGLQK++ G FGLPFGL M L SGGELFTGNTALVTAAV EGKAT K+L KNW  SY GN +GSLLLA +   +       +A A+  +K + PF   F++G++CNW+VCMAV++A+G SS+  K  A+  P+SAFVA G +HSVANMF++PLG++ GA  +++  D+ TKN++PVTLGNIVGGA+C    +   +GS  K
Sbjct:   53 LYQGAVAAGAAKASGSFEKIFKLGVVSGCHIAFGAYLALTVGGACPQIAQSNPGLQKIILGAFGLPFGLIMTLVSGGELFTGNTALVTAAVNEGKATKKDLAKNWIASYLGNFVGSLLLAFLAYKSQTLGTGPAAVAVATAKCSLPFEVAFVRGILCNWLVCMAVYMASGCSSMIGKMTAVWFPISAFVALGLDHSVANMFMIPLGIMRGAEITIA--DMFTKNLIPVTLGNIVGGALCVMAPFGTTFGSWFK 303
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig105.566.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSE1_ECTSI3.150e-14075.81Nitrite transporter NAR1 n=2 Tax=Ectocarpus TaxID=... [more]
A0A835ZQ31_9STRA4.850e-11165.76Formate/nitrite transporter n=1 Tax=Tribonema minu... [more]
D7G4R6_ECTSI1.110e-9957.14Nitrite transporter NAR1 n=2 Tax=Ectocarpus TaxID=... [more]
B8BXN4_THAPS4.720e-9356.70Formate/nitrite transporter family member n=1 Tax=... [more]
A0A6U5HVT6_9STRA8.380e-9154.55Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A448ZQ46_9STRA2.700e-8955.64Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A6S9B5G3_9STRA3.140e-8955.15Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2UWW2_9STRA3.570e-8954.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2AA06_TRICV2.080e-8853.79Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2DZW8_9STRA1.400e-8756.13Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig105contigD-herbacea_F_contig105:914838..921383 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score333.6
Seed ortholog evalue6.7e-89
Seed eggNOG ortholog2880.D8LSE1
Preferred nameNAR1
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Formate/nitrite transporter
EggNOG OGs2QUGF@2759,COG2116@1
Ec32 ortholog descriptionnitrite transporter NAR1
Ec32 orthologEc-21_003340.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1424
Cds size621
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927466.7738416-UTR-D-herbacea_F_contig105:914837..9150471622927466.7738416-UTR-D-herbacea_F_contig105:914837..915047Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig105 914838..915047 +
1690790186.3954008-UTR-D-herbacea_F_contig105:914837..9150471690790186.3954008-UTR-D-herbacea_F_contig105:914837..915047Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig105 914838..915047 +
1622927466.8416858-UTR-D-herbacea_F_contig105:920790..9213831622927466.8416858-UTR-D-herbacea_F_contig105:920790..921383Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig105 920791..921383 +
1690790186.4634602-UTR-D-herbacea_F_contig105:920790..9213831690790186.4634602-UTR-D-herbacea_F_contig105:920790..921383Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig105 920791..921383 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927466.7842221-CDS-D-herbacea_F_contig105:915047..9150531622927466.7842221-CDS-D-herbacea_F_contig105:915047..915053Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig105 915048..915053 +
1690790186.407016-CDS-D-herbacea_F_contig105:915047..9150531690790186.407016-CDS-D-herbacea_F_contig105:915047..915053Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig105 915048..915053 +
1622927466.7948322-CDS-D-herbacea_F_contig105:915488..9156371622927466.7948322-CDS-D-herbacea_F_contig105:915488..915637Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig105 915489..915637 +
1690790186.4150615-CDS-D-herbacea_F_contig105:915488..9156371690790186.4150615-CDS-D-herbacea_F_contig105:915488..915637Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig105 915489..915637 +
1622927466.8072648-CDS-D-herbacea_F_contig105:919077..9192741622927466.8072648-CDS-D-herbacea_F_contig105:919077..919274Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig105 919078..919274 +
1690790186.4266322-CDS-D-herbacea_F_contig105:919077..9192741690790186.4266322-CDS-D-herbacea_F_contig105:919077..919274Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig105 919078..919274 +
1622927466.8180552-CDS-D-herbacea_F_contig105:919851..9199461622927466.8180552-CDS-D-herbacea_F_contig105:919851..919946Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig105 919852..919946 +
1690790186.442946-CDS-D-herbacea_F_contig105:919851..9199461690790186.442946-CDS-D-herbacea_F_contig105:919851..919946Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig105 919852..919946 +
1622927466.8298202-CDS-D-herbacea_F_contig105:920616..9207901622927466.8298202-CDS-D-herbacea_F_contig105:920616..920790Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig105 920617..920790 +
1690790186.4538226-CDS-D-herbacea_F_contig105:920616..9207901690790186.4538226-CDS-D-herbacea_F_contig105:920616..920790Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig105 920617..920790 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig105.566.1prot_D-herbacea_F_contig105.566.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig105 915048..920790 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig105.566.1

>prot_D-herbacea_F_contig105.566.1 ID=prot_D-herbacea_F_contig105.566.1|Name=mRNA_D-herbacea_F_contig105.566.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=207bp
MKSANPGLQKLLFGIFGLPFGLYMVLTSGGELFTGNTALVTAAVIEGKAT
IKNLLKNWSVSYTGNLIGSLLLAKVVMHAGLNAVPASAAAITVSKVAKPF
FETFLKGMVCNWMVCMAVWVATGASSLTEKYLAMVLPVSAFVAFGAEHSV
ANMFLLPLGLLSGASESVSWMDIATKNILPVTLGNIVGGAVCQAGLYSAV
YGSLLK*
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mRNA from alignment at D-herbacea_F_contig105:914838..921383+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig105.566.1 ID=mRNA_D-herbacea_F_contig105.566.1|Name=mRNA_D-herbacea_F_contig105.566.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=6546bp|location=Sequence derived from alignment at D-herbacea_F_contig105:914838..921383+ (Desmarestia herbacea DmunF female)
GCGACCACGCTCAAGCCGGTAGAAGCGGCCCTCCTTGCACGCGGCGGGGA
CGTTAAGCCGCCGCCGGCTCTGTACACGAACGCTGTCGAGATTGGCGCGA
AGAAGGCTGCTGGCTCGGCGAGGGACACGTTTCTGCTTGGCGTCATCTCG
GGCTGTCACATCGCCTTTGGTGGCCTGCTGGCGATCACTGTCGGCGGTGC
TCTCCCTGGCATGAAGGTATGATAGTACAAGAGAAGCTCTGTTTAACCGC
GGCTTTGCTCGGACAGGCGCGCCGAGCGATGGGCTCCTATGAGAGCTGGA
ATGGGAAGTTAAGCTGGTGGATACAAAATGTAGAGTAATAATATCCATGC
CTCGTCGCTCGTTGCGCGAGTGCTTGCAGAAAGGAGTCGGGGGGAAGGAG
GGGGGAGGTGAGGGGGGGCTCTTTTTTTTTTCTTCATTTATTTTTTGTCC
TGTGCACCTGCTGCGTACGTCCATGTCGCACCAGCAAAGATGGCCGAGGC
AACCGTTTTACCTCGCTTGGTTTTCAAAAGGTCAGAATTCAATATGAAAT
GTCCCCCCCGCACCCCCCCCCCTCCCTCCCCCACGTTCCCCAACGCTCCT
TCAATTTATTTTCTTTGTCCTCCACTGATGCAAAAAAAAACTATTCAACA
GTCGGCGAACCCGGGTCTTCAGAAGCTTCTGTTCGGGATATTCGGGCTCC
CGTTCGGCTTGTACATGGTGCTCACCTCCGGCGGCGAGCTCTTCACGGGC
AACACGGCACTGGTGACGGCGGCAGTCATTGAGGGCAAGGCCACGATCAA
GTGAGAAGAGATGAGAGAGACGATTTTTGTGTTTGAGTGTTCCCCATGGA
ATCTGGGGGTTTTCTGTTGGAAAATCAAAATCTTTGTGTATGTACAAGGC
GCCCCCCCTCGCAGGCGGGTACCGCCCGCTACGGTCGCTCTACGAACAAA
AGTACATAAAAAAGGTGAAGCGGATACAGTAGTAGCACAGAGAGGTCCAT
GATTTGGTGCAACTGCCGACTGACGACTTGCAAATGCCAAGAGCTCCCCC
AGGAAGGAAAATAACCTGGACTCCGCATATTATGAACAGGCTCTATAATA
CGTTCAACTTGCAGGCAGCTGTTTGACCAGCTTTATCTGAAAGCATGTTA
ATAGTAAGTAGTAGTATGAACAGGCTATCTAATAAGAAGAACAGGCAGTT
GAACTTTGTGTCGTAGATTTTGGGAGACTCTCTCGGGAATTGCAGGGATG
GCCAAACCGAGTGATCTCCGACAAAAAGGTAAAAGTAAGAAAGTCTATGT
ATGTACAAGGGCGCCTACCGGGCAGTGAACTGCCCGGCAGGCTCGCAGGA
TTTTAGGGCGCATGCCAAGGGTGTGAGGGGATTTCGGCAAGGTACCGTGT
CAGTGGCGCAAACATCGTGCGTAAAGAGTAAGGGAAAATAGGAGAAGTAA
AACGGGTTTTCAATATTAGAGGCGAGACGAAACCCAACATTATAATAAAC
AGGAGACATAATAATACTGATATGACATCATCATCGCCAAATAAATGGTA
TAGGCGCTCCTATCTAAGTACAGTAGTGCAGTTAGCCAAAATGCAGTTAG
CCAAAATTCCACCGTATCCGATAGTAGTACAGCAGCAACAGGTGGTCTAC
AGTACGCAGTAGTACAGCACACAGCACGCAGTAGAAAGACAAATAAGGAT
ACCTACCTGTAGAGCAGTACAGGAGGAGCAGTAGTAATAGTATAAAAATA
GTAAGAACTGGTGGTGGTGGTGTAGTATCATAGCAGTATACCCGTGGCTT
CAGACAAACAAAAAGATGACACCATGCGGAATCGAACTCAATCAAGCCAA
AAATAATACAGAGCAAAATTATAAAATTATGACTTTTTTTTTTTTTTTTT
TCCGTCCCATTTATTATCTTCGCCCTAATGATAGTCTTACTCTATCTCCA
TCTCTCTTCGTAACTCAGATCCGGGGCCACATAGTAGGCGCTCCTCCCTC
CTTCCCACTACGGTACGTGCCTACATTTTTATCGCGAGAATAGTGCAGCA
CTTTCTTCCCTCGTCGACTTTCGTCGAATTGTGCTTACTCACGCTCTTCT
TGCGTTTTCCGCGACGGAAAATGACACAGAAAAGTGCCACCGGGAATCGA
ACCCACAACTTCCGCCAACAGAGGAAATACCCTAGCCATTAGACCACTGG
GGCACCCCCCCGTCTCCTCTGCACCGCTTATTAAATTGATTGCTACGAGT
TATTTGTTCCATGTATACGAGTATATGTAGCCTACTACTACTGTTGTACC
ATGGTATATGATATAATAATAGTACACATGTACACAGACAGTAGTATAGT
TGTAATTGTACACAGTACGTTGACTTGACGGCTGATGAAACGAAATAACA
CAACACTATTATTATAGTATAGGTCCTCGCAGAGGCACTGAATCCTGAAG
AACACCACGATTACAGCAATAGCGCTACACCACTACACCATGCAGCAGCC
TCTCGTGCACGCTACGACTATAGAGCTACTCTGTTGTTGGTGTTTTTGTG
TTTCGGTTGACGCGCTACGAACTTGCTTGCTTGACAATCCACACGCTCAC
ACTATAATACCTTGGAAAATGCACGTGAGCAAAACCTCAGCAGCGCAGGA
TGCGGCAAGCCATCCATGCACGACACTCTGTAGCAGCGGCGATTCTCGCA
GGTGTTTCAGCTGTACTACAATAGGTAAAGACTTTTCCCCGCAAGCAAAT
CAGTAGGCGCCATCGCCCCCAAGGCAAAACAACGTGTGCGTCACCCAGCA
AGGCGGCCTTACAGGATGAGCTGTTGCAGCGCCGGTACAAAAAACAAAAA
ACAATGAAGAAATCATCATACACGCGGCGCAGCATCATAAAAGGCAAGAA
GGAGTGCGACCCTCGTAATAAGGGCTACATCCGCGGGAATCCACGGGAAT
GCGGCTGTAGATCGCCCGTCTCTTGTTGGTCAAGGATGCGTACCCTCGCG
GAGGGCATCACCACTACTACTTTATACTACTGCTGCTGCTGTTCGTGAGT
GCGTGTGGTGTTACCTCATCAAAGAAAGATACTCCCCGCATCAAGCACCA
AACACGAACAACAACAACAACAGTCAGTCCACGGCCAACGCGCAAATGAG
GCCGCAACACCACAACCAAAAGCCGACTGCCCTCAAGCAGCAACGTTCCC
GGAGCGAGACCTGCTGCTACTGCAATGATCTTCTAGCGCTAGGAGCACAG
AGAGAGGCGCAACGCACGCGCGGCAGTTGTGCCCAAACTCTCTGATCCCT
TTTTATTGATTTTTTGTTGTTGTTGTGCCGTTCCGGCCGAAAAGAAGGGC
GTACTTTGCAATGAGATGTAAAGCCGTCTTTTGTCAGTTGTTACTCGTGT
TTGTACTTCGAAGTATGTGTTTCATGCGTTTTTTCACAGATCCGGGAGCG
AGGATCCATGATTGTGCTCTGGGGTTTGTTTCTTGTTTGTTTTCCGCAAA
GATCCGGGAGCGAGGACCAATGATTGTGCTCTGGGTTTTGTTTCTTATTT
GTGTCTTTTGAAATGTAAAGCCGTTTTTGTTACTCGTGTTTGTATGGCCG
GAGAGTATCCATGGTTGAACTCTGCTCTCTCGTGCGTTTGGGACAATCGT
ATATAGGTTTATGTATGTATGTAGGTATGTATGTATGTATGTATGTATGT
ATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGAATGTAT
CTATGTATGTAAGTCTGTATGTATGTACGTCTGAAACACGCCCCAGTAGG
CATGACCCTTGCATTTTTTTGTCGAGTCTCTCGCGGAAACCTGGCAATTG
AAACGGTCACCAAAGCAGTATCTGGCGATTGCAATAGACACACCTGATGA
CACACACAGCACCCGTCAGATCAAACTTTGTTTTTTTTGCAATAATATAG
ATTCGCTCTGCGGACGGGTTGGGTGACGCGGTCATTTTTTGCCAAAAAAA
ACAAAGAGAAACGGGTGCTGTAGAGGCGTATACGCGTATACCACGGTGTA
AGCGTTGAAAGTTTGGTGTATTCGGGAATGTGATAGAATAATCGCAATCC
AGGTTCGTTATTATTTATAATACCCGGTAGCCGCTGCCCAATCCGCGCAC
TCAATTGTTCCATTGTCCCCACCCCGCGTTAATGGTCAAATGACAAAGAC
AAGCAACAAACGGGTACCCCCCCCCTCACCCCCCAACCAGGAACCTGCTG
AAGAACTGGTCCGTCTCGTACACCGGAAACCTTATCGGCTCTCTGTTGTT
GGCCAAGGTGGTGATGCACGCGGGGCTTAACGCGGTGCCCGCTTCGGCCG
CCGCCATCACGGTGTCTAAGGTGGCCAAGCCCTTCTTCGAGACGTTCCTC
AAGGGCATGGTGTGCAACTGGATGGTGTGCATGGCCGGTGAGGGCGGCTA
TCATAAGTGCTTGGACAGCGTGTGTAGACGGGGGTGTGCGCCGGGAGGTT
AGGAAACGGGGGGGCCGCGGGGCTGCTCACACGGCTTACTTACTTTGGAC
TTTTGTTGCTGGACGGACCATTGACGCAACTAGTTTTTTTTTTTGGAGGG
GTATCGTAAGCGGTGGAGCCGGGGGCTTACTGTTGAGGTGAAGATGTGTA
TGGTATTCGGTGGCCTACTGTCCTCGACGCGGAATCGGGGAGTGAAGGGG
GTGAGGGGGGTGAGGCACTCCCTTTGTTTTGATATTTTCATTTCGTGGCA
ACGCGTCCCGAGAGAGGGTGGGTCGGGTGGGTGGGCGGGCCGGTCGGTCG
GTCGGTCGGTCGAGGATCAGCTGTATAATATTACAAATCAACCAGTAATT
AAAAAATCAAACAAACGTCCTGGCGACAATCGAATGTGTCGTCATGTCAT
GCATAAATCCCCCTCTCAATTTTGTTCGTTTTGTTTTGTTTTGTTTTGTT
TTGTTTTGTTTTGTTTTGTTTTGTTGTATTTTTCGTGCGTGTGTACTCCA
CGGTGGTTTGGCAGTGTGGGTTGCTACCGGCGCCTCCAGCCTTACCGAGA
AATACCTGGCGATGGTCCTACCCGTCTCCGCCTTCGTGGCGTTTGGCGCG
GAGCACTCGGTGAGTTTTTGTTGCTGTTTGTTCCCTTTCTTTATTTGTGG
TTTGAGTGTTTTTCTTTTACGAGACCAGACCAGACCAGCTCACCACGGTG
ATATTTTTTACTCGGCGTGCAGCGTTGACCCATTCCATCATAGTGGACAC
ACAAACACACATTGCGGAATGCTATGGAGCGTGTAGATGGGAAGAAGGCC
TGCGGGATACCTGAGCGAGACACGAGGGAGGCACTAACAATCCGGGATGG
GATGCCCAATGATGCCATGGGAAAACGGTTTTTGGTGTTATCATATGTAT
GTATGAACAACGCAAGGGTGGAAACGTAAACGTAAGCCTGCTGGCCGGCG
CAAAATCTGGTTTGTGTTATCGTTCCGTCCCGACTTTTTGTTGGAATGCA
GAGGTCAGTGGTTGACGAGTTTGGAAGGCGTTATCATGCGTGCCTAGGTT
GTAGATGGTGACCACACAAGGCGAATCAAAAGGTTTTTATGTAAAGATAG
TATGGCGAAAAGGTAAAGAGAGCCGAATTGTTGGAGGTGCCTCTATTAGG
AGTAGGAGCGGTGCTCCGTGTCTCGAAAGGGATGCGTGGTCAATGGTCAA
ATCACAAAGGCAAGCAACAAATGAATACCCCCCCCCCCCCCTGCCTCCGC
CACCGCCGTCGTGCCGCGCCTTGAAACAGGTCGCCAACATGTTCCTCCTT
CCGCTGGGTCTGCTCAGCGGTGCGTCGGAATCTGTCTCCTGGATGGATAT
CGCGACTAAGAACATCCTGCCGGTGACTCTCGGGAACATCGTGGGCGGCG
CCGTCTGCCAGGCGGGGCTGTACTCCGCGGTGTACGGGTCCTTGTTGAAG
TAACAGCAAAAACAATGGTTTACCGTTTCACTTTGAAAATGCACACACAA
TATTTCTGTTGTTTTTAATACTAATATGGTGTATTAGCTGGATTTGACGA
GAAGGGTAATATTGCACGCGCGGCTCGTGCTTGCTCGAGTTTTGTTTTTT
ATTGTCAATGTACAGTTGGTGCCTGTATTGCAACACGTTGTCCTGCTGTT
GTCAACATTTAGTATTAACAATCGTAGCTTCGGATAGAGGCAGTACCGCA
CACGATTTTAAAATTTGAATGGTCTCGAGCCAGCCGAGCTGTGGTGCGGT
TGCGCCAATTGTGGTTTTGTCACATGACAGTACAGTACGGCAGTACATTA
GTTCACACAGCTTTTTGTTTTTTGGAGGTTGCAACAAGGGGGCATCGTTC
TTGTTCTTGCACGAACTCATCATGCGTTGCGTGCTCTCTGCTCACGAGTG
GGGGCTCTTTTCGTTGAGCAGGTTGTGCTACGGAGTCGTACGCGATGCTC
TGCCGAATGGTGCGTTTTTGTGGGTAAAAGCTTATTTATTGGAGCGTGTG
AGGGGATACTAGGGAATCTTCCTTCATCAAGCGTAGAAGGGCGGGG
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Coding sequence (CDS) from alignment at D-herbacea_F_contig105:914838..921383+

>mRNA_D-herbacea_F_contig105.566.1 ID=mRNA_D-herbacea_F_contig105.566.1|Name=mRNA_D-herbacea_F_contig105.566.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1242bp|location=Sequence derived from alignment at D-herbacea_F_contig105:914838..921383+ (Desmarestia herbacea DmunF female)
ATGAAGATGAAGTCGGCGAACCCGGGTCTTCAGAAGCTTCTGTTCGGGAT
ATTCGGGCTCCCGTTCGGCTTGTACATGGTGCTCACCTCCGGCGGCGAGC
TCTTCACGGGCAACACGGCACTGGTGACGGCGGCAGTCATTGAGGGCAAG
GCCACGATCAATCGGCGAACCCGGGTCTTCAGAAGCTTCTGTTCGGGATA
TTCGGGCTCCCGTTCGGCTTGTACATGGTGCTCACCTCCGGCGGCGAGCT
CTTCACGGGCAACACGGCACTGGTGACGGCGGCAGTCATTGAGGGCAAGG
CCACGATCAAGAACCTGCTGAAGAACTGGTCCGTCTCGTACACCGGAAAC
CTTATCGGCTCTCTGTTGTTGGCCAAGGTGGTGATGCACGCGGGGCTTAA
CGCGGTGCCCGCTTCGGCCGCCGCCATCACGGTGTCTAAGGTGGCCAAGC
CCTTCTTCGAGACGTTCCTCAAGGGCATGGTGTGCAACTGGATGGTGTGC
ATGGCCGGAACCTGCTGAAGAACTGGTCCGTCTCGTACACCGGAAACCTT
ATCGGCTCTCTGTTGTTGGCCAAGGTGGTGATGCACGCGGGGCTTAACGC
GGTGCCCGCTTCGGCCGCCGCCATCACGGTGTCTAAGGTGGCCAAGCCCT
TCTTCGAGACGTTCCTCAAGGGCATGGTGTGCAACTGGATGGTGTGCATG
GCCGTGTGGGTTGCTACCGGCGCCTCCAGCCTTACCGAGAAATACCTGGC
GATGGTCCTACCCGTCTCCGCCTTCGTGGCGTTTGGCGCGGAGCACTCGT
GTGGGTTGCTACCGGCGCCTCCAGCCTTACCGAGAAATACCTGGCGATGG
TCCTACCCGTCTCCGCCTTCGTGGCGTTTGGCGCGGAGCACTCGGTCGCC
AACATGTTCCTCCTTCCGCTGGGTCTGCTCAGCGGTGCGTCGGAATCTGT
CTCCTGGATGGATATCGCGACTAAGAACATCCTGCCGGTGACTCTCGGGA
ACATCGTGGGCGGCGCCGTCTGCCAGGCGGGGCTGTACTCCGCGGTGTAC
GGGTCCTTGTTGAAGTAAGTCGCCAACATGTTCCTCCTTCCGCTGGGTCT
GCTCAGCGGTGCGTCGGAATCTGTCTCCTGGATGGATATCGCGACTAAGA
ACATCCTGCCGGTGACTCTCGGGAACATCGTGGGCGGCGCCGTCTGCCAG
GCGGGGCTGTACTCCGCGGTGTACGGGTCCTTGTTGAAGTAA
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