mRNA_D-herbacea_F_contig104.466.1 (mRNA) Desmarestia herbacea DmunF female
|
Overview
Homology
BLAST of mRNA_D-herbacea_F_contig104.466.1 vs. uniprot
Match: D7G459_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G459_ECTSI) HSP 1 Score: 790 bits (2040), Expect = 4.310e-278 Identity = 441/699 (63.09%), Postives = 514/699 (73.53%), Query Frame = 3
Query: 168 MRRLARAYPEAVAAISPAAVEESRARYAAAELPRQEKVSACPMDVQANGAAPKKWSNAELGTPDFFEWLNTIPPDAA---ERLGERSILRDDNTFQEXXXXXXXSGGINIGKAFLLPRAKLSLYDQEIFASSLLEGRDKVLQARSPGQLKIAHDRLRATETAINARAGNYKTVKVGFEEPAPSAGS------ATPTEGSRRVQRLPRVRASAGGTRVVYGPSETFAYVYHRMMPAYTVVHRVMTELRNELPDLNPSSMLDFGSGPGTAALAVWDVWGMEGGNVKDEHGQEHREAGSNLSEIRMVEESQSMKDACKVMLEPLTETGRARVGFGTSLLDEARAAGRGGRGGAPGGKKFDLVVAAYSLSHLSTHASRQETLHFCVCYIFLREAAATAVMWSLVAPGGVLVLVEDGSAKGSHTVRSARQMVLGRTSSSXXXXXXXXXRRXXXXXXXXXAAPPRTPYVVGPCRHDKECPLQPGEFCRFLQKVPWNAVNVTKSSVKSLPFSYVTMRKGAPVRQASENEQLGSRTSSSSVDLLKAFSEQGRR---GGGLSAAMDALGTDGISDATLRRENWARLIRKPLKARGHALLDVCSPDGDIQRKIVGRGKWKGAPGVYVAARKSELGGLWPYLDNHDARDHTASRLQESADDGDGEEGAIET--DNGDG----EWESE-RWDEVGDGWER--VLDLDEDGV 2201
MRRLARA+PEAVAAISP+AVE+SR+ YAA+ +PR ++ Q + K W+NA+LGTP+FF WLNT+P +AA E + E XX G +N+GKAFL+PRAK+SLYDQ+IFA S+LE RDKVL ARSPGQL+ AHDRLR TETA+N RAGNY+TVKVGFEEPAPSAGS P GS R AS RVVYGPSETFAYVYHRMMPAYTV+HRVMTE+ +ELP NP +MLDFGSGPGT+ALAVWDVWG GG+ + G+E E GSNLSE+R+VEESQSMKDACK+MLEPLT TGR R GFGTSLL+EAR AGRGG GGAPGG+KFDLVVAAYSLSHL THASR AAATAVMWSLVAPGGVLVLVEDGSAKGSHTVRSAR MVL + S ++ PP PYV+GPCRHDKECPLQ GEFCR QKVPWNAVNVT S+VKS+ FSYV++RKG P R+A ++E++GSRTSSSSVDLLKAF +Q + GG L AMD+LGTDGISDA LRR++WARL+RKPLKA+GHALLDVCSP+G+IQRK+V +GKWKG PG++VAARKS++GGLWPYLDNHD +D TA S+ GE + + D GDG E +S+ W+EVGD ER V+D E GV
Sbjct: 1 MRRLARAHPEAVAAISPSAVEDSRSVYAAS-VPRSKQ-------SQVGNSGAKVWTNADLGTPEFFAWLNTVPHNAARHLEEVNEEDXXXXXXXXXXXXGDALGDGPLNMGKAFLIPRAKMSLYDQDIFAHSMLEARDKVLAARSPGQLRKAHDRLRETETALNLRAGNYRTVKVGFEEPAPSAGSMDGLSQTEPAHGSSR--------ASGRANRVVYGPSETFAYVYHRMMPAYTVLHRVMTEVTSELPGFNPRTMLDFGSGPGTSALAVWDVWGAGGGSSVAQDGKETGE-GSNLSEVRLVEESQSMKDACKIMLEPLTNTGRIRTGFGTSLLEEARTAGRGGPGGAPGGRKFDLVVAAYSLSHLPTHASR---------------AAATAVMWSLVAPGGVLVLVEDGSAKGSHTVRSARHMVLRPPAPSPEQGGDTGKQQGNRRGKRNERQPPPRPYVIGPCRHDKECPLQAGEFCRLQQKVPWNAVNVTSSAVKSVSFSYVSIRKGPPEREAGQDERVGSRTSSSSVDLLKAFVQQKKNLNDGGSLRDAMDSLGTDGISDAILRRDDWARLVRKPLKAKGHALLDVCSPEGNIQRKVVAKGKWKGVPGMFVAARKSQVGGLWPYLDNHDYKDRTAKLDDASSGQPGGEFYSFDPSEDGGDGVDFLEGDSDGEWEEVGDE-ERGPVVDWTEGGV 666
BLAST of mRNA_D-herbacea_F_contig104.466.1 vs. uniprot
Match: A0A835Z4D0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4D0_9STRA) HSP 1 Score: 199 bits (506), Expect = 2.690e-50 Identity = 165/520 (31.73%), Postives = 223/520 (42.88%), Query Frame = 3
Query: 789 VVYGPSETFAYVYHRMMPAYTVVHRVMTELRNELPDLNPSSMLDFGSGPGTAALAVWDVWGME---------------------------------------------------GGNVKDEHGQEHREAGSNLSEIRMVEESQSMKDACKVMLEPLTETGRARVGFGTSLLDEARAAGRGGRGGAPG----------GKKFDLVVAAYSLSHLSTHASRQETLHFCVCYIFLREAAATAVMWSLVAPGGVLVLVEDGSAKGSHTVRSARQMVLGRTSSSXXXXXXXXXRRXXXXXXXXXAA---------------PPRTPYVVGPCRHDKECPL-QPGEFCRFLQKVPWNAVNVTKSSVKSLPFSYVTMRKGAPVRQASENEQLGSRTSSSSVDLLK-----------------------------AFSEQGRRGGGLSAAMDALGTDG--ISDATLRRENWARLIRKPLKARGHALLDVCSPDGDIQRKIVGRGKWKGAPGVYVAARKSELGGLWPYL 2024
VVYGP ET+AYV HRM+PAY + RV+ E R+ LP P S LDFG+GPGTA LA WG++ + + G + + A + LS++R+VE S++M+DA +L L G A+V +L++ + A GK +DLV A Y+L+ L T R AA A++W LV PGG L +VE G A+GSH VRS RQ +L T XXXXXXXXX P V+ PCRHD CP+ + R Q++ N + + FSYV + K + Q G T+S V LL+ A+ +AA DA G G + D R WAR+IR P KA H LL +CSP G ++R I+ + +W+ A GVY+AARK+ LGGLWP+L
Sbjct: 82 VVYGPDETYAYVSHRMLPAYAIARRVLEEARDLLPGFEPKSHLDFGAGPGTAVLAARSAWGLDPAKDDEFESESQDEXXXXXXXXXXXXXXXXXXXXXXXXXDGQLAWSTEAGTDAEGQSDEGAQAKGASAVLSDVRLVENSRAMRDAAATVLGSLPSAG-AKVSVSANLVEASEAXXXXXXXXXXXXXXXXXXXXQGKSYDLVTANYALAELPTADQR---------------LAAAALLWRLVKPGGALAVVEHGDARGSHVVRSLRQSILDGTEGHLAGSPDEYRXXXXXXXXXXXXXXXXXSVVGGKRRRKRPEGRARVIAPCRHDGRCPMGDEPKVPRMSQRLEGN------TGLSHEAFSYVVLHKATD-----DEPQPGDITTS--VALLRTLVAANATEDPEAALGEAVTNFQRAQGDPAYIPTADTDAAGAAAADAPGDSGGGLLDTAAVRGEWARIIRNPAKAHQHVLLHLCSPQGALERVIINKARWRHAQGVYIAARKARLGGLWPWL 572
BLAST of mRNA_D-herbacea_F_contig104.466.1 vs. uniprot
Match: W7U9Y7_9STRA (Mitochondrial chloroplast ribosome small subunit component n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U9Y7_9STRA) HSP 1 Score: 167 bits (424), Expect = 1.450e-40 Identity = 133/435 (30.57%), Postives = 201/435 (46.21%), Query Frame = 3
Query: 792 VYGPSETFAYVYHRMMPAYTVVHRVMTEL----RNEL---PDLNPSSMLDFGSGPGTAALAVWDVWGMEGGNVKDEHGQEHREAGSNLSEIRMVEESQSMKDACKVMLEPLTETGRARVGFGTSLLDEARAA---GRGGRGGAPGGKKFDLVVAAYSLSHLSTHASRQETLHFCVCYIFLREAAATAVMWSLVAP-GGVLVLVEDGSAKGSHTVRSARQMVLGRTSSSXXXXXXXXXRRXXXXXXXXXAAPPRTPYVVGPCRHDKECPLQPGEFCRFLQKVP----WNAVNVTKSSVKSLPFSYVTMRKGAPVRQASENEQLGSRTSSSSVDLLKAF----SEQGRRGGGLSAAMDALGTDGISDATLR----RENWARLIRKPLKARGHALLDVCSPDGDIQRKIVGRGKWKGAPGVYVAARKSELGGLWPYLD 2027
V P E AY+ R + +++ RV+ ++ R+ L + P S LD G GPG+A LA +W ++ + V+ SQ+M+D K ++E G+ + G G L+ + GR +FD+V A+++LS L + ASR A AT++MW LVA GG LV+VEDGS +GS VRS R++VL P VGPC+HD+ CPL E+CRF Q++P + S K + FSY ++K + E ++ G + + ++ L S +G G AA D + L+ RE W RLIR P K +GH LD+C+P G+++R +V + + PG Y+AARK++ GGLWP+ D
Sbjct: 210 VASPPEALAYLSTRSLLNFSINLRVLRDVAVAARSPLFASSEARPRSFLDVGCGPGSALLAAHTLW-------------------PDIPRLDGVDHSQAMQDLTKHVVET---GGKDQAGRGDRLVLHRHLPPLLAQSGRSQL----RFDVVFASWTLSELPSDASR---------------ALATSIMWELVAENGGFLVVVEDGSPEGSRLVRSVRKLVL---------------EGGDPGTQAGTTGPQARARTVGPCQHDRPCPLPREEWCRFSQRIPIGRLHRRIGKPGSGYKDVAFSYTILKKLPGTGEDGEGDKEGRKWGDARLEALHRLRYGDSGKGEEDG---AAYPYRPKDRDWEVALQADPGREGWGRLIRNPKKKKGHVHLDLCTPAGELERVMVAKRATRALPGKYMAARKAQWGGLWPFPD 585
BLAST of mRNA_D-herbacea_F_contig104.466.1 vs. uniprot
Match: A0A024UMB9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UMB9_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.390e-37 Identity = 128/420 (30.48%), Postives = 187/420 (44.52%), Query Frame = 3
Query: 792 VYGPSETFAYVYHRMMPAYTVVHRVMTELRN---ELPDLNPSSMLDFGSGPGTAALAVWDVWGMEGGNVKDEHGQEHREAGSNLSEIRMVEESQSMKDACKVMLEPLTETGRARVGFGTSLLDEARAAGRGGRGGAPGGKKFDLVVAAYSLSHLSTHASRQETLHFCVCYIFLREAAATAVMWSLVAPGGVLVLVEDGSAKGSHTVRSARQMVLGRTSSSXXXXXXXXXRRXXXXXXXXXAAPPRTP--YVVGPCRHDKECPLQPGEFCRFLQKVP---WNAVNVTK--SSVKSLPFSYVTMRKGAPVRQASENEQLGSRTSSSSVDLLKAFSEQGRRGGGLSAAMDALGTDGISDATLRRE-NWARLIRKPLKARGHALLDVCSPDGDIQRKIVGRGKWKGAPGVYVAARKSELGGLWP 2018
+YGP ET AY+ M ++ VH V+ ++ N E P SMLDFG+GPGTA+ + + DE +L+E R+VE SQSM DA V++E G + F SL + R +G K++DL+V ++ LS ++ R A + +WSL+A G LV+V+ G++ GS VRSARQ +L +++ A PR V+GPC H KECP+Q GE+C F+Q+ P + T+ + S+ FSYVT+ K A G + DA R E ARL R P+ + H LD+C P+G ++R+ V +G+ + VY AARK+ G WP
Sbjct: 11 LYGPQETMAYMAFEMDGVFSAVHHVLRQMTNVDGEAAPFRPKSMLDFGAGPGTASWVAKEFF--------DE----------SLNEYRLVEPSQSMMDAAAVVME-----GFRGLSFRKSLSEMKREIVKG--------KQYDLIVVSFVLSDITNDFER---------------IAVMSTLWSLLAENGRLVIVDRGNSWGSLQVRSARQFILDSLTANAEEMVESND------------ATPRIEGGKVLGPCPHQKECPMQEGEWCHFVQRTPRVIQPRLPTTQRWAGYASMKFSYVTLEKKA-------------------------------------------GHNSEKDAATRTELPHARLTRGPILSNRHVTLDLCHPEGTMERRSVTKGRAE--RDVYRAARKAHWGSQWP 327
BLAST of mRNA_D-herbacea_F_contig104.466.1 vs. uniprot
Match: W4H305_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H305_9STRA) HSP 1 Score: 156 bits (394), Expect = 2.210e-37 Identity = 132/424 (31.13%), Postives = 188/424 (44.34%), Query Frame = 3
Query: 792 VYGPSETFAYVYHRMMPAYTVVHRV---MTELRNELPDLNPSSMLDFGSGPGTAALAVWDVWGMEGGNVKDEHGQEHREAGSNLSEIRMVEESQSMKDACKVMLEPLTETGRARVGFGTSLLDEARAAGRGGRGGAPGGKKFDLVVAAYSLSHLSTHASRQETLHFCVCYIFLREAAATAVMWSLVAPGGVLVLVEDGSAKGSHTVRSARQMVLGRTSSSXXXXXXXXXRRXXXXXXXXXAAPPRTP--YVVGPCRHDKECPLQPGEFCRFLQKVPWNAVNVTK---------SSVKSLPFSYVTMRKGAPVRQASENEQLGSRTSSSSVDLLKAFSEQGRRGGGLSAAMDALGTDGISDATLRRE-NWARLIRKPLKARGHALLDVCSPDGDIQRKIVGRGKWKGAPGVYVAARKSELGGLWP 2018
+YGP ET AY+ M Y+ VH V MT+ E P SMLDFGSGPGTA+ + + DE +L E R+VE SQSM DA V++E G + F SL + R +G K++DL++A++ LS ++ R A + +WSL+A G LVLV+ G++ GS VRSARQ +L +++ A PR V+GPC H KECP++ GE+C F+Q+ P VT+ + S+ FSYVT+ K +AS N + +D R E AR+ R PL + H LD+C P+G+++R+ V +G+ VY AARK+ G WP
Sbjct: 111 LYGPQETMAYMAFEMDGVYSSVHHVLRQMTDADGEATPFQPKSMLDFGSGPGTASWVAKEFF--------DE----------SLQEYRLVEPSQSMADAANVIME-----GFRGLSFRKSLGEMKREIAKG--------KQYDLIMASFVLSDITNDIER---------------IAIVSTLWSLLAENGRLVLVDRGNSWGSLQVRSARQFILDSLTTNADEVVVSDD------------ATPRIQGGKVLGPCPHQKECPMKEGEWCHFVQRTP----RVTQPRLPTTQRWAGYTSMKFSYVTIEK-----KASHNSE--------------------------------------TDVATRTELPPARMTRGPLLSSRHVTLDLCHPEGELERRPVTKGR--AIRDVYRAARKAHWGAQWP 427
BLAST of mRNA_D-herbacea_F_contig104.466.1 vs. uniprot
Match: A0A6A4FJR5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FJR5_9STRA) HSP 1 Score: 153 bits (386), Expect = 2.280e-36 Identity = 120/415 (28.92%), Postives = 172/415 (41.45%), Query Frame = 3
Query: 795 YGPSETFAYVYHRMMPAYTVVHRVMTELRNELPDLNPSSMLDFGSGPGTAALAVWDVWGMEGGNVKDEHGQEHREAGSNLSEIRMVEESQSMKDACKVMLEPLTETGRARVGFGTSLLDEARAAGRGGRGGAPGGKKFDLVVAAYSLSHLSTHASRQETLHFCVCYIFLREAAATAVMWSLVAPGGVLVLVEDGSAKGSHTVRSARQMVLGRTSSSXXXXXXXXXRRXXXXXXXXXAAPPRTPYVVGPCRHDKECPLQPGEFCRFLQKVPWNAVNVTKSSV-------KSLPFSYVTMRKGAPVRQASENEQLGSRTSSSSVDLLKAFSEQGRRGGGLSAAMDALGTDGISDATLRRENWARLIRKPLKARGHALLDVCSPDGDIQRKIVGRGKWKGAPGVYVAARKSELGGLWP 2018
YGP+ET A++ M Y H V TEL+ LPD P+S+LDFG+GPGTA+ D + L + R+VE SQSM DA +V+L G + S+ D +R G K+DL+V +Y S ++ R A T+ +W L++ G LV+V+ GS GSH VRSARQ VL + ++ PC H ECP +C F+Q+ P VN + + K FSY+ M+K R+ S+ + A ++ AR++R PL A H LD+C+P+G I+R+ V +GK VY A+RK+ G LWP
Sbjct: 147 YGPAETLAFLAFEMEATYACTHAVFTELQKRLPDFKPTSVLDFGAGPGTASWVAKDFYDQS------------------LDKYRVVEPSQSMVDAAEVLLG-----GFPGLSVRRSIADMSRDINAG--------NKYDLIVVSYVFSDITNDFER---------------VATTSALWELLSENGCLVVVDRGSPWGSHHVRSARQFVLDSVKADEDGKEGAR--------------------IIAPCPHHFECPAAGSTWCHFVQRSP--VVNRPREATTKRWHGQKGSKFSYMIMQK---TRKGSDEDA----------------------------------------AANEKKPIARMMRGPLLATRHVYLDLCTPEGTIERRSVTKGK--AIREVYRASRKAHWGALWP 448
BLAST of mRNA_D-herbacea_F_contig104.466.1 vs. uniprot
Match: A0A024FZ65_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024FZ65_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.390e-33 Identity = 122/413 (29.54%), Postives = 182/413 (44.07%), Query Frame = 3
Query: 795 YGPSETFAYVYHRMMPAYTVVHRVMTELRNELPDLNPSSMLDFGSGPGTAALAVWDVWGMEGGNVKDEHGQEHREAGSNLSEIRMVEESQSMKDACKVMLEPLTETGRARVGFGTSLLDEARAAGRGGRGGAPGGKKFDLVVAAYSLSHLSTHASRQETLHFCVCYIFLREAAATAVMWSLVAPGGVLVLVEDGSAKGSHTVRSARQMVLGRTSSSXXXXXXXXXRRXXXXXXXXXAAPPRTPYVVGPCRHDKECPLQPGEFCRFLQKVPW-----NAVNVTKSSVKSLPFSYVTMRKGAPVRQASENEQLGSRTSSSSVDLLKAFSEQGRRGGGLSAAMDALGTDGISDATLRRENWARLIRKPLKARGHALLDVCSPDGDIQRKIVGRGKWKGAPGVYVAARKSELGGLWP 2018
YGPSET AY+ + + +Y ++ V +LRN+ P+SM+DFGSGPGTA+ A + + DE Q+H+ +VE SQ+M DA +V++E R LDE R+ K+D +V Y LS ++T R + + +V+W L++ G LV+V+ GS GSH VRSARQ +L +S+ VV PC H+++CP + G +C F+Q+ P + + K FSY M++ S L K+ +E D S A+L AR+IR PL A+ + +LD+C+P G I+R+ V +G VY AARK+ G WP
Sbjct: 146 YGPSETLAYLAYEIDASYATIYNVFRQLRNKDQHFRPTSMIDFGSGPGTASWAAREFF--------DESIQKHQ----------IVETSQAMTDAAQVVMEGFNGFSIRRS------LDELRSE-------VLLNIKYDFIVLNYVLSEITTDFERVKIM---------------SVLWELLSEDGYLVIVDRGSPWGSHQVRSARQFILDSVNSTADFSVQ----------------------VVAPCPHNEQCPARKGTWCHFVQRSPVVIRPRDGTARRWHNQKGSKFSYAVMKR--------------------SPGLCKSETE-----------------DSPSKASL-----ARMIRAPLLAKRNVILDLCTPQGIIERRTVTKGT--SMREVYRAARKAHWGAEWP 446
BLAST of mRNA_D-herbacea_F_contig104.466.1 vs. uniprot
Match: A0A1V9YKE9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKE9_9STRA) HSP 1 Score: 144 bits (364), Expect = 2.270e-33 Identity = 129/432 (29.86%), Postives = 184/432 (42.59%), Query Frame = 3
Query: 795 YGPSETFAYVYHRMMPAYTVVHRVMTELRNEL---------PDLN-----PSSMLDFGSGPGTAALAVWDVWGMEGGNVKDEHGQEHREAGSNLSEIRMVEESQSMKDACKVMLEPLTETGRARVGFGTSLLDEARAAGRGGRGGAPGGKKFDLVVAAYSLSHLSTHASRQETLHFCVCYIFLREAAATAVMWSLVAPGGVLVLVEDGSAKGSHTVRSARQMVLGRTSSSXXXXXXXXXRRXXXXXXXXXAAPPRTPYV-----VGPCRHDKECPLQPGEFCRFLQKVPWNAVNVTKSSVK-----SLPFSYVTMRKGAPVRQASENEQLGSRTSSSSVDLLKAFSEQGRRGGGLSAAMDALGTDGISDATLRRENWARLIRKPLKARGHALLDVCSPDGDIQRKIVGRGKWKGAPGVYVAARKSELGGLWP 2018
YGP ET AY+ H M Y+ VH V ++ D N P SMLD+G GPGTAA A + DE +L+E R++E SQSM DA +V++E G + F SL + R +G K +DL+ ++ LS ++ R A + +WSL+A GG LV+V+ G++ GS VRSARQ +L +++ A+ P V +GPC H KECP++ GE+C F+Q+ P A + + S+ FSYVT K A +S+S+VD +A ARL R PL + LD+C P+G ++R+ V +G+ Y AARKS GG WP
Sbjct: 111 YGPQETLAYMAHEMDGVYSSVHHVFRQMTKPAVSFRKGANDDDANTEPFAPKSMLDYGGGPGTAAWAARMFF--------DE----------SLNEYRVIEPSQSMIDAAQVVME-----GFRGLSFRKSLAEMKRDIEKG--------KTYDLITLSFVLSDITNDVER---------------IAIVSTLWSLLAEGGRLVIVDRGNSWGSLQVRSARQFILDSLTTNQEEVI---------------ASDDAVPVVEGGRILGPCPHSKECPMKEGEWCHFVQRTPQVAQPRLPTPQRWTGYHSMKFSYVTFEKKA--------------SSNSAVDDTEAH--------------------------------ARLTRGPLTSTRQVTLDLCHPNGTLERRAVTKGR--AIREAYRAARKSHWGGQWP 433
BLAST of mRNA_D-herbacea_F_contig104.466.1 vs. uniprot
Match: A0A067CSR4_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CSR4_SAPPC) HSP 1 Score: 144 bits (363), Expect = 3.480e-33 Identity = 123/432 (28.47%), Postives = 179/432 (41.44%), Query Frame = 3
Query: 795 YGPSETFAYVYHRMMPAYTVVHRVMTEL-------RNELPD-------LNPSSMLDFGSGPGTAALAVWDVWGMEGGNVKDEHGQEHREAGSNLSEIRMVEESQSMKDACKVMLEPLTETGRARVGFGTSLLDEARAAGRGGRGGAPGGKKFDLVVAAYSLSHLSTHASRQETLHFCVCYIFLREAAATAVMWSLVAPGGVLVLVEDGSAKGSHTVRSARQMVLGRTSSSXXXXXXXXXRRXXXXXXXXXAAPPRTPYV-----VGPCRHDKECPLQPGEFCRFLQKVPWNAVNVTKSSVK-----SLPFSYVTMRKGAPVRQASENEQLGSRTSSSSVDLLKAFSEQGRRGGGLSAAMDALGTDGISDATLRRENWARLIRKPLKARGHALLDVCSPDGDIQRKIVGRGKWKGAPGVYVAARKSELGGLWP 2018
YGP ET AY+ H M Y+ VH V ++ R++ D P S+LDFG GPGTAA + +++E R++E SQSM DA +V +E G + F SL + R +G K +DL+ ++ LS ++ R A + +WSL+A GG LV+V+ G++ GS VRSARQ VL +++ A+ P+V +GPC H KECP++ GE+C F+Q+ P + + + S+ FSYVT+ K A G S A E ARL R PL + +D+C P+G ++R+ V +G+ Y AARKS GG WP
Sbjct: 118 YGPQETLAYMAHEMDGVYSSVHHVFRQMAKPAVSFRDDDDDNKAKNAPFAPKSLLDFGGGPGTAAWVAKQFYD------------------DSINEYRIIEPSQSMLDAAQVTME-----GFRGLSFRKSLGEMKREIEKG--------KTYDLITLSFVLSDITNDVER---------------IAIVSTLWSLLADGGRLVIVDRGNSWGSLQVRSARQFVLDSLTTNQEEVI---------------ASDDAVPHVEGGRILGPCPHAKECPMKEGEWCHFVQRTPQVSQPRLPTPQRWTGYHSMKFSYVTLEKKA----------------------------------------------GYSSAANDEETHARLTRGPLTSTRQVTIDLCHPNGSLERRAVTKGR--AVREAYRAARKSHWGGQWP 440
BLAST of mRNA_D-herbacea_F_contig104.466.1 vs. uniprot
Match: A0A485L598_9STRA (Aste57867_16288 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L598_9STRA) HSP 1 Score: 142 bits (359), Expect = 8.840e-33 Identity = 125/416 (30.05%), Postives = 181/416 (43.51%), Query Frame = 3
Query: 795 YGPSETFAYVYHRMMPAYTVVHRVMTELRNEL-PDLNPSSMLDFGSGPGTAALAVWDVWGMEGGNVKDEHGQEHREAGSNLSEIRMVEESQSMKDACKVMLEPLTETGRARVGFGTSLLDEARAAGRGGRGGAPGGKKFDLVVAAYSLSHLSTHASRQETLHFCVCYIFLREAAATAVMWSLVAPGGVLVLVEDGSAKGSHTVRSARQMVLGRTSSSXXXXXXXXXRRXXXXXXXXXAAPPRTP--YVVGPCRHDKECPLQPGEFCRFLQKVP---WNAVNVTK--SSVKSLPFSYVTMRKGAPVRQASENEQLGSRTSSSSVDLLKAFSEQGRRGGGLSAAMDALGTDGISDATLRRENWARLIRKPLKARGHALLDVCSPDGDIQRKIVGRGKWKGAPGVYVAARKSELGGLWP 2018
YGP ET AY+ M Y+ VH + ++ ++ P SMLDFG+GPGTA+ A + DE L+E R+VE SQSM DA ++E G + F SL + R +G K++DL+V ++ LS ++ R A + +W L+A G LVLV+ G++ GS VRSARQ +L +++ A PR V+GPC H KECP+Q GE+C F+Q+ P + T+ + KS+ SYVT+ K K F +D + TL AR+ R PL + H LD+C P G+++R+ V +G+ VY AARK+ G WP
Sbjct: 111 YGPQETVAYLAFEMDGVYSAVHHALRQMHDQDGAAFQPKSMLDFGAGPGTASWAAKAFY--------DE----------TLNEYRLVEPSQSMVDAAHDVME-----GFRGLSFRKSLGEMKREIDKG--------KQYDLIVVSFVLSEITNDVER---------------IAIVSTLWHLLAENGRLVLVDRGNSWGSLQVRSARQFILDSLTTNQDQVVESND------------ATPRIQGGRVLGPCPHQKECPMQEGEWCHFVQRAPKVVQPRLPTTERWAGYKSMKLSYVTLEK------------------------KKNFD-----------------SDEAEEETL-----ARMTRGPLLSTKHVTLDLCLPKGELERRAVTKGRT--VREVYRAARKAHWGAQWP 420 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig104.466.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig104.466.1 >prot_D-herbacea_F_contig104.466.1 ID=prot_D-herbacea_F_contig104.466.1|Name=mRNA_D-herbacea_F_contig104.466.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=733bp MPRGTSWAIGRPALRAANGTIGRGSRWSVSTKSGDAGQESMMQGVKMPRLback to top mRNA from alignment at D-herbacea_F_contig104:302989..316043- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig104.466.1 ID=mRNA_D-herbacea_F_contig104.466.1|Name=mRNA_D-herbacea_F_contig104.466.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=13055bp|location=Sequence derived from alignment at D-herbacea_F_contig104:302989..316043- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig104:302989..316043- >mRNA_D-herbacea_F_contig104.466.1 ID=mRNA_D-herbacea_F_contig104.466.1|Name=mRNA_D-herbacea_F_contig104.466.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=4398bp|location=Sequence derived from alignment at D-herbacea_F_contig104:302989..316043- (Desmarestia herbacea DmunF female)back to top |