mRNA_D-herbacea_F_contig10.149.1 (mRNA) Desmarestia herbacea DmunF female
|
Overview
Homology
BLAST of mRNA_D-herbacea_F_contig10.149.1 vs. uniprot
Match: D7FP93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP93_ECTSI) HSP 1 Score: 322 bits (825), Expect = 7.080e-99 Identity = 223/516 (43.22%), Postives = 287/516 (55.62%), Query Frame = 1
Query: 1 ERLILSEVHVGNSAL-DESEVVSRYAYITPGAHDHRQRDTGSTRSXXXXXXXXXXXXXHGSGITRRRKRHRSSPPSCQRRASRPAHEVLTVVHRMATTLDLVGQQVWSAAFLLGDFILAHEEIFRGAQVLELGAGPGVGGLVAARVARRCFLTDYHDKVLEVLARNAEANQHLFAHEQPSPADIPPVYLTSSAASKQSRRGAGQAASSTTDASGVASRSNSCHDEGTVEEQQRVVAVRKLDWFKFSTPEAGIDKASC-TVDEDEVEVRLWVRATYYKGCSNGGEQSTNTEEQQEAIQDSAPTPFFAWRKGEIEKLT--SKSEIGGSLLLIASDVIYDEGLTEALFNVLRKLMPPPMTPS----KMDNNVGGSIS------------------TSRKSC--------------------------VLYLALEKRFNFSLAALAVEATGYQSLVRNVLDISGKCDNDSRVALESGPRQD--RRERQDFQGTTIPLSFPSYFDYQRSEAMELWEIRRLP 1386
ERL+LSEVHVG+S L +E+EVVSRYAY+TP + D+ D+G XXX H R+R RH + C RP+HEVLT+VH+MATTL LVGQQVWSA+FLLGDF+L H E+F G QVL+LGAGPGV GL+AARVARRC+LTDYHD+VL++L RN EAN+HLFA E P AA+ R AG S SG D G V AVRKLDWF FS + +D +C +++ED+ + + C+ G+ NT + + + F+WRKGE++ L+ S S+ GG ++ +A+DVIYDEGLT+ALF L LMP P + K D N +S T SC VLYLALEKRFNFS+A L+V ATGY +L+RNV+D++ +ND G Q + ++ F+G +PLSF F Y+RS AMELWEIRR P
Sbjct: 18 ERLVLSEVHVGSSGLHEEAEVVSRYAYLTPTSDDNE--DSGXXXXXXXEEQTRPRVARH-----RKRPRHEVAQRCC-----RPSHEVLTIVHKMATTLGLVGQQVWSASFLLGDFVLTHNELFVGMQVLDLGAGPGVVGLIAARVARRCYLTDYHDEVLKLLDRNVEANRHLFALE-------PSATHDDDAAAP---RAAGGGDSDVQVESGTLCSGVRSSDGGRARSGDCVAAVRKLDWFTFSKEQDSLDVTTCDSLEEDQAQSPAFPSEA---DCAGMGDVQNNTND--DRTTGTGTCGPFSWRKGELDGLSLISDSKRGGPVI-VAADVIYDEGLTDALFQALTLLMPVPSLRARGLGKEDRNCDSKVSSTADNATKPLPHQTTPSTTPTPSCEDSAVTYVPVSKPVDDHDCHPLGTNAVLYLALEKRFNFSVAELSVAATGYSALLRNVVDVT---ENDGVGTGVDGCTQQGLKSAKKAFEGRRLPLSFQQCFRYERSNAMELWEIRRRP 502
BLAST of mRNA_D-herbacea_F_contig10.149.1 vs. uniprot
Match: A0A6H5L0F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0F3_9PHAE) HSP 1 Score: 309 bits (792), Expect = 5.780e-94 Identity = 223/516 (43.22%), Postives = 286/516 (55.43%), Query Frame = 1
Query: 1 ERLILSEVHVGNSAL-DESEVVSRYAYITPGAHDHRQRDTGSTRSXXXXXXXXXXXXXHGSGITRRRKRHRSSPPSCQRRASRPAHEVLTVVHRMATTLDLVGQQVWSAAFLLGDFILAHEEIFRGAQVLELGAGPGVGGLVAARVARRCFLTDYHDKVLEVLARNAEANQHLFAHEQPSPADIPPVYLTSSAASKQSRRGAGQA-ASSTTDASGVASRSNSCHDEGTVEEQQRVVAVRKLDWFKFSTPEAGIDKASCTVDEDEVEVRLWVRATYYKGCSNGGEQSTNTEEQQEAIQDSAPTPFFAWRKGEIEKLTSKSEIG-GSLLLIASDVIYDEGLTEALFNVLRKLMPPPMTPS----KMDNNVGGSIS------------------TSRKSC--------------------------VLYLALEKRFNFSLAALAVEATGYQSLVRNVLDISGKCDNDSRVALESGPRQDRRE-RQDFQGTTIPLSFPSYFDYQRSEAMELWEIRRLPRA 1392
ERL+LSEVHVG S L +E+EVVSR+AY+TP + D+ XXXXXXXX + R RKR R +R RP+HEVLT+VH+MATTL LVGQQVWSA+FLLGDF+L H+E+F G QVL+LGAGPGV GL+AARVARRC+LTDYHD+VL++LARN EAN+HLFA E P L AA + + G + T SGV SR D G V AVRKLDWF FS + D +C V+ED+ R + G + + F+WR GE++ L++ S+ G L+++A+DVIYDEGLT+ALF L+ LMP P + K N GS S T+ SC VLYLALEKRFNFS A L+V ATGY +L+RNV ++ + N ++ +Q + ++ F+G +PLSF F Y+RS AMELWEIRR P +
Sbjct: 22 ERLVLSEVHVGGSNLHEEAEVVSRFAYLTPTSGDNEDXXXXXXXXXXXXXXXXTRPR-----VARHRKRPRHE---VAQRCCRPSHEVLTIVHKMATTLGLVGQQVWSASFLLGDFVLTHDELFAGMQVLDLGAGPGVVGLIAARVARRCYLTDYHDEVLKLLARNVEANRHLFALE-------PSAVLDDDAAPRDAGGGYSDVQVENGTLCSGVRSR-----DGGGPRSGDCVAAVRKLDWFTFSKEQDPPDLTTC-VEEDQ-------RHAFSSEADIAGMGDVKNNPNDDRTTGTGTCGRFSWRDGELDGLSNISDSKRGGLVIVAADVIYDEGLTDALFEALKLLMPVPSLRTRGLGKDGRNCNGSNSSTADNATKTLPHHTTPSTTATPSCEDLAVTDVPVSKPVDDHECHPLGTDAVLYLALEKRFNFSAAELSVAATGYNALMRNVEIVTEE--NGVGTGVDDCTQQGLQSAKKGFEGRRLPLSFQQCFRYERSNAMELWEIRRRPES 507
BLAST of mRNA_D-herbacea_F_contig10.149.1 vs. uniprot
Match: D7U0K3_VITVI (Uncharacterized protein n=7 Tax=Vitis TaxID=3603 RepID=D7U0K3_VITVI) HSP 1 Score: 112 bits (279), Expect = 3.040e-23 Identity = 125/470 (26.60%), Postives = 184/470 (39.15%), Query Frame = 1
Query: 10 ILSEVHVGNSALDESEVVSRYAYITP--GAHDHRQRDTGSTRSXXXXXXXXXXXXXHGSGITRRRKRHRSSPPSCQRRASRPAHEVLTVVHRMATTLDLVGQQVWSAAFLLGDFILAH---EEIFRGAQVLELGAGPGVGGLVAARVARRCFLTDYHDKVLEVLARNAEANQHLFAHEQPSPADIPPVYLTSSAASKQSRRGAGQAASSTTDASGVASRSNSCHDEGTVEEQQRVVAVRKLDWFKFSTPEAGIDKASCTVDEDEVEVRLWVRATYYKGCSNGGEQSTNTEEQQEAIQDSAPTPFFAWRKGEIEKLTSKSEIGGSLLLIASDVIYDEGLTEALFNVLRKLMPPPMTPSKMDNNVGGSISTSRKSCVLYLALEKRFNFSLAALAVEATGY---QSLVRNVLDISGKCDNDSRVALESGPRQDRRERQDFQGTTIPLS-FPSYF-DYQRSEAMELWEIRRLPR 1389
++SEVH+G +S++ P GA RQ + ST+ G + +RR R S SC L + H + +++ VG QVW A +L DF+L F G LELGAG G+ G++ A VA+R F+TD+ D++L+ A N N +F H Q V VR L+W P T+D + S+ T+++ F+W E+E E+ G+ LL+A+DVIY + LT+A FN L +LM + VLYLALEKR+NFSL L V A GY QS +R+ + +C++ + E PR F G I L+ P Y +Y R +E+W+I+ + R
Sbjct: 19 VMSEVHLGCPPGLSGPHISKFTISLPPQGAESIRQGEAVSTQQNIELDED-------GDLVVKRRNR--QSNRSC----------CLIIQHNITSSIPNVGLQVWRAELILSDFVLHKIHTSSEFEGIVSLELGAGTGMVGIILACVAKRVFITDHGDEILDNCANNVHLNSEMFNH-------------------------------------------------------QASVYVRGLNWKNSWPP---------TMDSE----------------------SSETQKR------------FSWTASEVE------EVQGASLLLAADVIYSDDLTDAFFNTLERLM------------------SQGSEKVLYLALEKRYNFSLDDLDVVANGYLRFQSYLRD----AEECES---LEHEPLPR--------FVGKPIDLTQIPQYVREYNRGNDIEIWQIKYVRR 332
BLAST of mRNA_D-herbacea_F_contig10.149.1 vs. uniprot
Match: A0A6P7IWY7_9TELE (methyltransferase-like protein 22 n=1 Tax=Parambassis ranga TaxID=210632 RepID=A0A6P7IWY7_9TELE) HSP 1 Score: 111 bits (278), Expect = 1.020e-22 Identity = 94/383 (24.54%), Postives = 143/383 (37.34%), Query Frame = 1
Query: 238 ASRPAHEVLTVVHRMATTLDLVGQQVWSAAFLLGDFILAHEEIFRGAQVLELGAGPGVGGLVAARVARRCFLTDYHDKVLEVLARNAEANQHLFAHEQPSPADIPPVYLTSSAASKQSRRGAGQAASSTTDASGVASRSNSCHDEGTVEEQQRVVAVRKLDWFKFSTPEAGIDKASCTVDEDEVEVRLWVRATYYKGCSNGGEQSTNTEEQQEAIQDSAPTPFFAWRKGEIEKLTSKSEIGGSLLLIASDVIYDEGLTEALFNVLRKLMPPPMTPSKMDNNVGGSISTSRKSCVLYLALEKRFNFSLAALAVEATGYQSLVRNVLDISGKCDNDSRVALESGPRQDRRERQDFQGTTIPLSFPSYFDYQRSEAMELWEIRRLP 1386
A R +++ + H MAT L+ VG+QVW AFLL DFI + ++FRGA VL+LGAG G+ +V A VA+ + TD + +L + +N N HL +PS ++ VR+LDW + CT + +VE F+W K E++ L + +IA+DV YD+ LT+ALF L +L S +C +++ALEKR NF+L + V Y V + + D +E +P F + Y+R E +ELW++ P
Sbjct: 142 AGRCFKDIIRIEHTMATPLEDVGKQVWRGAFLLADFIFSEPDMFRGATVLDLGAGTGLTSIVMATVAKTVYCTDVGEDLLSMCKKNVTLNTHLM---EPSGGEV---------------------------------------------------KVRRLDWLEHEL---------CT--DADVE--------------------------------------FSWTKEEVDDLYDSTSF-----IIAADVCYDDDLTDALFRTLYQLC-----------------SGFSHTCTIFIALEKRMNFTLRHMDVSCEAYNHYVHCLSQLQDLVDGRCSFKVEQ----------------LPSDFDQFLQYERIEQLELWKLTSTP 383
BLAST of mRNA_D-herbacea_F_contig10.149.1 vs. uniprot
Match: A0A1Y1HLW6_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HLW6_KLENI) HSP 1 Score: 110 bits (274), Expect = 2.670e-22 Identity = 108/377 (28.65%), Postives = 155/377 (41.11%), Query Frame = 1
Query: 274 HRMATTLDLVGQQVWSAAFLLGDFILAHEEI---FRGAQVLELGAGPGVGGLVAARVARRCFLTDYHDKVLEVLARNAEANQHLFAHEQPSPADIPPVYLTSSAASKQSRRGAGQAASSTTDASGVASRSNSCHDEGTVEEQQRVVAVRKLDWFKFSTPEAGIDKASCTVDEDEVEVRLWVRATYYKGCSNGGEQSTNTEEQQEAIQDSAPTPFFAWRKGEIEKLTSKSEIGGSLLLIASDVIYDEGLTEALFNVLRKLMPPPMTPSKMDNNVGGSISTSRKSCVLYLALEKRFNFSLAALAVEATGYQSLVRNVLDISGKCDND---SRVALESGPRQDRRERQDFQGTTIPLS-FPSYFD-YQRSEAMELWEIRR 1380
H +AT+L VG QVW A LL D+IL E FRG LELGAG G+ G++ AR AR+ ++TD + VL+ RN +N FA ++ CH VAVR+LDW F P++ +A NGG + + + + + W E+E ++G +L+A+DVIYD+ LT+ALF + +LM ++ T + LYLALEKR+NFSL AV A G + D+SG D S +A +S R +G I + P Y Y+R + +ELW + R
Sbjct: 114 HSLATSLPDVGLQVWRGALLLADYILHQEATTGCFRGVTALELGAGTGLAGIIMARSARKVYVTDRGENVLDTCLRNVISNS-TFAP------------------------------------------TSGCH-----------VAVRELDWCHF--PQSASREA------------------------NGGGRLSRPDSP-----GGGSSGDYGWSPEELE------DLGHVSVLLAADVIYDDTLTDALFGCVERLM---------------AVGTPK---TLYLALEKRYNFSLNDRAVVANGCRKFRAKFDDVSGAGSGDVIRSVIASDSTSEPHRTGPARLRGRLIDIEGIPQYLHPYERGKDLELWMLFR 381
BLAST of mRNA_D-herbacea_F_contig10.149.1 vs. uniprot
Match: UPI001CF9C67A (methyltransferase-like protein 22 isoform X1 n=5 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CF9C67A) HSP 1 Score: 107 bits (266), Expect = 1.600e-21 Identity = 104/377 (27.59%), Postives = 153/377 (40.58%), Query Frame = 1
Query: 262 LTVVHRMATTLDLVGQQVWSAAFLLGDFILAHEEI---FRGAQVLELGAGPGVGGLVAARVARRCFLTDYHDKVLEVLARNAEANQHLFAHEQPSPADIPPVYLTSSAASKQSRRGAGQAASSTTDASGVASRSNSCHDEGTVEEQQRVVAVRKLDWFKFSTPEAGIDKASCTVDEDEVEVRLWVRATYYKGCSNGGEQSTNTEEQQEAIQDSAPTPFFAWRKGEIEKLTSKSEIGGSLLLIASDVIYDEGLTEALFNVLRKLMPPPMTPSKMDNNVGGSISTSRKSCVLYLALEKRFNFSLAALAVEATGYQSLVRNVLDISGKCDNDSRVALESGPRQDRRERQDFQGTTIPLS-FPSYF-DYQRSEAMELWEIR 1377
+T+ H + +++ VG QVW A +L DF++ I F G LELGAG G+ G++ ARVAR+ FLTD+ D++L+ A+N E N +F H G+V +R+L+W P + DSA ++W + E+E E+ + LL+A+DVIY + LT+ALF++L +LM S+ + + VLYLALEKR+NFSL+ L V A GY S R+ L G+ + E G F G I L P Y +Y R +ELW+I+
Sbjct: 96 MTIQHNVTSSIPSVGLQVWKAELVLSDFVMHKMCISSEFYGIVSLELGAGTGLVGMLLARVARKVFLTDHGDEILDNCAKNVELNSGVF------------------------------------------------HCRGSVN-------IRELNWMNPWPPNMSLG-------------------------------------------DSASQTRYSWNQSELE------EVKSAHLLVAADVIYSDDLTDALFSILERLM---------------SLGSEK---VLYLALEKRYNFSLSDLDVVANGY-SHFRSYLREEGES-----KSPECGSTPC------FVGKHIDLKEIPQYVKEYDRGSDVELWQIK 338
BLAST of mRNA_D-herbacea_F_contig10.149.1 vs. uniprot
Match: A0A6B2LAN9_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LAN9_9EUKA) HSP 1 Score: 106 bits (264), Expect = 1.710e-21 Identity = 47/96 (48.96%), Postives = 68/96 (70.83%), Query Frame = 1
Query: 232 RRASRPAHEVLTVVHRMATTLDLVGQQVWSAAFLLGDFILAHEEIFRGAQVLELGAGPGVGGLVAARVARRCFLTDYHDKVLEVLARNAEANQHLF 519
+R + EVLT+VH M T++ VG QVW A LLGDFIL ++E+F+ A ++ELG G G GL+A+R+A++C+LTD+ ++VL+ RN N HLF
Sbjct: 48 KRPKKQRTEVLTIVHHMDTSIHYVGLQVWRGALLLGDFILNNQELFKNATIMELGCGSGFSGLIASRIAKKCYLTDFDEEVLKNCQRNVSLNSHLF 143
BLAST of mRNA_D-herbacea_F_contig10.149.1 vs. uniprot
Match: UPI001ED7EB38 (methyltransferase-like protein 22 n=1 Tax=Scatophagus argus TaxID=75038 RepID=UPI001ED7EB38) HSP 1 Score: 107 bits (266), Expect = 2.890e-21 Identity = 98/373 (26.27%), Postives = 139/373 (37.27%), Query Frame = 1
Query: 256 EVLTVVHRMATTLDLVGQQVWSAAFLLGDFILAHEEIFRGAQVLELGAGPGVGGLVAARVARRCFLTDYHDKVLEVLARNAEANQHLFAHEQPSPADIPPVYLTSSAASKQSRRGAGQAASSTTDASGVASRSNSCHDEGTVEEQQRVVAVRKLDWFKFSTPEAGIDKASCTVDEDEVEVRLWVRATYYKGCSNGGEQSTNTEEQQEAIQDSAPTPFFAWRKGEIEKLTSKSEIGGSLLLIASDVIYDEGLTEALFNVLRKLMPPPMTPSKMDNNVGGSISTSRKSCVLYLALEKRFNFSLAALAVEATGYQSLVRNVLDISGKCDNDSRVALESGPRQDRRERQDFQGTTIPLSFPSYFDYQRSEAMELWEI 1374
+V+ + H MAT LD VG+QVW AFLL DFIL+ FRGA VLELGAG G+ +V A A+ + TD + +L + RN +N HL +PS GQ V VR LDW + CT + EVE F W + E+ + + +IA+DV YD+ LT+ LF L +L S SC +++A+EKR NF+L L V Y + + + G D ++E +P SF + Y+R E +ELW++
Sbjct: 137 KVIRIEHTMATPLDDVGKQVWRGAFLLADFILSEPLTFRGATVLELGAGTGLTSIVMATTAKTVYCTDVGEDLLSMCKRNVASNIHL---REPS---------------------GGQ------------------------------VKVRHLDWLQDDL---------CT--DSEVE--------------------------------------FNWTEEEVADMYDHTSF-----IIAADVCYDDDLTDGLFRTLYRLC-----------------SHFAHSCTVFIAIEKRMNFTLRHLNVSCEAYDHFTQCLSQLQGLKDGRCNFSVEQ----------------LPPSFAQFLLYERIEQLELWKV 368
BLAST of mRNA_D-herbacea_F_contig10.149.1 vs. uniprot
Match: UPI0018A0A384 (methyltransferase-like protein 22 n=1 Tax=Sebastes umbrosus TaxID=72105 RepID=UPI0018A0A384) HSP 1 Score: 103 bits (258), Expect = 3.810e-20 Identity = 87/376 (23.14%), Postives = 141/376 (37.50%), Query Frame = 1
Query: 259 VLTVVHRMATTLDLVGQQVWSAAFLLGDFILAHEEIFRGAQVLELGAGPGVGGLVAARVARRCFLTDYHDKVLEVLARNAEANQHLFAHEQPSPADIPPVYLTSSAASKQSRRGAGQAASSTTDASGVASRSNSCHDEGTVEEQQRVVAVRKLDWFKFSTPEAGIDKASCTVDEDEVEVRLWVRATYYKGCSNGGEQSTNTEEQQEAIQDSAPTPFFAWRKGEIEKLTSKSEIGGSLLLIASDVIYDEGLTEALFNVLRKLMPPPMTPSKMDNNVGGSISTSRKSCVLYLALEKRFNFSLAALAVEATGYQSLVRNVLDISGKCDNDSRVALESGPRQDRRERQDFQGTTIPLSFPSYFDYQRSEAMELWEIRRLP 1386
++ + H MAT L+ VG+QVW AF + DFIL+ +FRGA VLELGAG G+ +V A +A+ + TD + +L + RN N+H+ +P+ D+ VR+LDW + CT + +VE F W + E+ + ++I +IA+DV YDE LT+ LF + +L S +C++++++EKR NF+L + V Y R + + D +E +P +F + Y+R E +ELW++ P
Sbjct: 148 IIKIEHAMATPLEDVGKQVWRGAFYMADFILSKPLVFRGATVLELGAGTGLTSIVMATIAKTVYCTDVGEDLLNMCERNVTLNRHML---EPAGGDV---------------------------------------------------RVRQLDWLQHDL---------CT--DADVE--------------------------------------FKWTEEEVADMYDNTKI-----IIAADVCYDEDLTDGLFRTVYRLC-----------------SNFPHTCMIFISIEKRMNFTLREMDVSCDAYNHFRRCLSQLQDLVDGRCSFRVEQ----------------LPSNFAQFLLYERVEQLELWKVTATP 382
BLAST of mRNA_D-herbacea_F_contig10.149.1 vs. uniprot
Match: A0A834LHT7_RHOSS (Uncharacterized protein n=2 Tax=Rhododendron TaxID=4346 RepID=A0A834LHT7_RHOSS) HSP 1 Score: 101 bits (252), Expect = 1.480e-19 Identity = 105/379 (27.70%), Postives = 154/379 (40.63%), Query Frame = 1
Query: 259 VLTVVHRMATTLDLVGQQVWSAAFLLGDFILAHEEI----FRGAQVLELGAGPGVGGLVAARVARRCFLTDYHDKVLEVLARNAEANQHLFAHEQPSPADIPPVYLTSSAASKQSRRGAGQAASSTTDASGVASRSNSCHDEGTVEEQQRVVAVRKLDWFKFSTPEAGIDKASCTVDEDEVEVRLWVRATYYKGCSNGGEQSTNTEEQQEAIQDSAPTPFFAWRKGEIEKLTSKSEIGGSLLLIASDVIYDEGLTEALFNVLRKLMPPPMTPSKMDNNVGGSISTSRKSCVLYLALEKRFNFSLAALAVEATGYQSLVRNVLDISGKCDNDSRVALESGPRQDRRERQDFQGTTIPLS-FPSYF-DYQRSEAMELWEIR 1377
V+T+ H++ +++ VG QVW A +L DF+L H+ + F G +ELGAG G+ G++ ARVA+ FLTD+ ++VL+ A N N SG+ S H VR+LDW K S P ++ N++ Q+ +AW E+E+L S L+IA+DVIY + LT+A F L +LM + P K V YLALEKR+NF+L L V A GY S R+ L G+C++ +L F G I L+ P Y +Y R +E+W+I+
Sbjct: 117 VVTIQHKITSSIPSVGLQVWRAELILADFVL-HKMVTSSEFDGIVAIELGAGTGLVGILLARVAKTVFLTDHGEEVLDNCADNVRLN------------------------------------------SGIIHSEASAH-------------VRELDW-KDSWPTKVVE---------------------------------NSQAQER----------YAWTSVEVEELQKAS------LIIAADVIYSDDLTDAFFKTLERLMK--LRPEK----------------VAYLALEKRYNFTLDDLNVVANGY-SHFRSYLRDEGECNDLKSRSLPC-----------FVGKRIDLADIPQYMREYDRGNDVEIWQIK 359 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig10.149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig10.149.1 >prot_D-herbacea_F_contig10.149.1 ID=prot_D-herbacea_F_contig10.149.1|Name=mRNA_D-herbacea_F_contig10.149.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=374bp MATTLDLVGQQVWSAAFLLGDFILAHEEIFRGAQVLELGAGPGVGGLVAAback to top mRNA from alignment at D-herbacea_F_contig10:720919..724534+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig10.149.1 ID=mRNA_D-herbacea_F_contig10.149.1|Name=mRNA_D-herbacea_F_contig10.149.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=3616bp|location=Sequence derived from alignment at D-herbacea_F_contig10:720919..724534+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig10:720919..724534+ >mRNA_D-herbacea_F_contig10.149.1 ID=mRNA_D-herbacea_F_contig10.149.1|Name=mRNA_D-herbacea_F_contig10.149.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2244bp|location=Sequence derived from alignment at D-herbacea_F_contig10:720919..724534+ (Desmarestia herbacea DmunF female)back to top |