mRNA_D-dudresnayi_contig10432.470.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10432.470.1
Unique NamemRNA_D-dudresnayi_contig10432.470.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10432.470.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10432contigD-dudresnayi_contig10432:2519..3142 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons1
Model size625
Cds size570
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927543.4871128-CDS-D-dudresnayi_contig10432:2518..30881622927543.4871128-CDS-D-dudresnayi_contig10432:2518..3088Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10432 2519..3088 +
1690556800.430988-CDS-D-dudresnayi_contig10432:2518..30881690556800.430988-CDS-D-dudresnayi_contig10432:2518..3088Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10432 2519..3088 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927543.5036016-UTR-D-dudresnayi_contig10432:3088..31421622927543.5036016-UTR-D-dudresnayi_contig10432:3088..3142Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10432 3089..3142 +
1690556800.438217-UTR-D-dudresnayi_contig10432:3088..31421690556800.438217-UTR-D-dudresnayi_contig10432:3088..3142Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10432 3089..3142 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10432.470.1prot_D-dudresnayi_contig10432.470.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10432 2519..3088 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10432.470.1

>prot_D-dudresnayi_contig10432.470.1 ID=prot_D-dudresnayi_contig10432.470.1|Name=mRNA_D-dudresnayi_contig10432.470.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=190bp
LVGAVLRCCFVGSLGILSSRTGCVQKTGGRRRVRRGDLARGFFFCFVHFL
GCHGENSRGVSVLSCPEIDFRSGVERALRRFLAPFQRKHRGPQGSSSKTI
KPHIPGSKLLRRRRATVSRSNRGVTTLYDCDCTAIIAQLCDSYGWRRDVR
VRWPGFREALLACLLCGCDDDGGRKQMSVARGDGDLAVL*
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mRNA from alignment at D-dudresnayi_contig10432:2519..3142+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10432.470.1 ID=mRNA_D-dudresnayi_contig10432.470.1|Name=mRNA_D-dudresnayi_contig10432.470.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=624bp|location=Sequence derived from alignment at D-dudresnayi_contig10432:2519..3142+ (Desmarestia dudresnayi DdudBR16 monoicous)
CTTGTGGGTGCGGTGTTAAGATGCTGTTTTGTGGGGTCTCTCGGCATTTT
GTCGAGTAGAACAGGATGTGTACAAAAAACAGGCGGACGCCGAAGGGTGC
GTCGAGGTGATCTCGCACGTGGTTTTTTTTTCTGTTTTGTGCACTTTCTG
GGTTGTCACGGAGAAAATTCTCGGGGGGTTTCGGTTCTCTCCTGTCCGGA
AATTGATTTTCGGTCGGGAGTTGAGAGGGCACTGCGGCGCTTCCTGGCGC
CTTTTCAAAGAAAGCACAGGGGTCCACAGGGGTCCTCCAGCAAAACAATA
AAACCCCACATTCCTGGGTCGAAATTGTTACGACGACGACGTGCCACAGT
TTCCCGATCAAACAGGGGTGTCACAACGTTGTATGACTGCGACTGCACAG
CCATTATTGCCCAACTCTGTGACAGCTATGGATGGCGTAGAGACGTGCGC
GTGCGTTGGCCGGGCTTTCGAGAAGCGTTACTGGCGTGCTTGCTCTGTGG
TTGTGACGACGATGGTGGAAGGAAGCAAATGAGCGTTGCACGCGGAGACG
GAGACCTTGCAGTGTTGTGAACTCTTCTTGTAGTTTCCGTCTATTGCGAC
AGGCCTGGAGGTATTGGGGGAGGG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10432:2519..3142+

>mRNA_D-dudresnayi_contig10432.470.1 ID=mRNA_D-dudresnayi_contig10432.470.1|Name=mRNA_D-dudresnayi_contig10432.470.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1140bp|location=Sequence derived from alignment at D-dudresnayi_contig10432:2519..3142+ (Desmarestia dudresnayi DdudBR16 monoicous)
CTTGTGGGTGCGGTGTTAAGATGCTGTTTTGTGGGGTCTCTCGGCATTTT
GTCGAGTAGAACAGGATGTGTACAAAAAACAGGCGGACGCCGAAGGGTGC
GTCGAGGTGATCTCGCACGTGGTTTTTTTTTCTGTTTTGTGCACTTTCTG
GGTTGTCACGGAGAAAATTCTCGGGGGGTTTCGGTTCTCTCCTGTCCGGA
AATTGATTTTCGGTCGGGAGTTGAGAGGGCACTGCGGCGCTTCCTGGCGC
CTTTTCAAAGAAAGCACAGGGGTCCACAGGGGTCCTCCAGCAAAACAATA
AAACCCCACATTCCTGGGTCGAAATTGTTACGACGACGACGTGCCACAGT
TTCCCGATCAAACAGGGGTGTCACAACGTTGTATGACTGCGACTGCACAG
CCATTATTGCCCAACTCTGTGACAGCTATGGATGGCGTAGAGACGTGCGC
GTGCGTTGGCCGGGCTTTCGAGAAGCGTTACTGGCGTGCTTGCTCTGTGG
TTGTGACGACGATGGTGGAAGGAAGCAAATGAGCGTTGCACGCGGAGACG
GAGACCTTGCAGTGTTGTGACTTGTGGGTGCGGTGTTAAGATGCTGTTTT
GTGGGGTCTCTCGGCATTTTGTCGAGTAGAACAGGATGTGTACAAAAAAC
AGGCGGACGCCGAAGGGTGCGTCGAGGTGATCTCGCACGTGGTTTTTTTT
TCTGTTTTGTGCACTTTCTGGGTTGTCACGGAGAAAATTCTCGGGGGGTT
TCGGTTCTCTCCTGTCCGGAAATTGATTTTCGGTCGGGAGTTGAGAGGGC
ACTGCGGCGCTTCCTGGCGCCTTTTCAAAGAAAGCACAGGGGTCCACAGG
GGTCCTCCAGCAAAACAATAAAACCCCACATTCCTGGGTCGAAATTGTTA
CGACGACGACGTGCCACAGTTTCCCGATCAAACAGGGGTGTCACAACGTT
GTATGACTGCGACTGCACAGCCATTATTGCCCAACTCTGTGACAGCTATG
GATGGCGTAGAGACGTGCGCGTGCGTTGGCCGGGCTTTCGAGAAGCGTTA
CTGGCGTGCTTGCTCTGTGGTTGTGACGACGATGGTGGAAGGAAGCAAAT
GAGCGTTGCACGCGGAGACGGAGACCTTGCAGTGTTGTGA
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