mRNA_D-dudresnayi_contig10414.445.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10414.445.1 vs. uniprot
Match: A0A6H5K982_9PHAE (Radical SAM core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K982_9PHAE) HSP 1 Score: 125 bits (315), Expect = 1.970e-30 Identity = 68/122 (55.74%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 1 GAASYVDGRRFSRPRGLPEYGRWVDKLEAEGWTSATA----TAAEXXXXXXXXXX---------PSDEAVEKDSLLDDVMLGFRLMEGLDLDAICTKYGDDAAMGVEAGVAEGLQRGWVLHD 327 GAAS+VDG RFSRPRGLPEYG+WV +LE EGW AT TA E PS EA+E+D+LLDDVMLGFRL EGLDL + +KYG AA VE G EGL+ GWV+ D Sbjct: 285 GAASFVDGHRFSRPRGLPEYGQWVGELEEEGWAKATGAPRRTACEEVLPGGGGMGDGGGVEESRPSREALERDALLDDVMLGFRLKEGLDLRVVASKYGHSAARRVEEGATEGLRLGWVVRD 406
BLAST of mRNA_D-dudresnayi_contig10414.445.1 vs. uniprot
Match: D7FRC0_ECTSI (Radical S-adenosyl methionine domain-containing protein 1, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRC0_ECTSI) HSP 1 Score: 123 bits (308), Expect = 2.580e-29 Identity = 66/122 (54.10%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 1 GAASYVDGRRFSRPRGLPEYGRWVDKLEAEGWTSATAT----AAEXXXXXXXXXX---------PSDEAVEKDSLLDDVMLGFRLMEGLDLDAICTKYGDDAAMGVEAGVAEGLQRGWVLHD 327 GAAS+VDG RFSRPRGLPEYG+WV +LE EGW AT A E PS EA+E+D+LLDDVMLGFRL EGLDL + +KYG AA VE G EG+++GWV+ D Sbjct: 344 GAASFVDGYRFSRPRGLPEYGQWVGELEEEGWDKATGAPRRAACEEVLPGGGGMGDGAGAEESRPSREALERDALLDDVMLGFRLKEGLDLRVVASKYGHSAARRVEEGATEGMRQGWVVRD 465
BLAST of mRNA_D-dudresnayi_contig10414.445.1 vs. uniprot
Match: K9YWU0_DACSA (Heme chaperone HemW n=2 Tax=Cyanobacteria TaxID=1117 RepID=K9YWU0_DACSA) HSP 1 Score: 65.9 bits (159), Expect = 2.510e-9 Identity = 38/106 (35.85%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 1 GAASYVDGRRFSRPRGLPEYGRWVDKLEAEGWTSATATAAEXXXXXXXXXXPSDEAVEKDSLLDDVMLGFRLMEGLDLDAICTKYGDDAAMGVEAGVAEGLQRGWV 318 GAAS++ G+RF+RPR EY +WV+ L E T+T+ E +++ LLD +MLG RL +G+DL AI +YG + + + ++ L R WV Sbjct: 276 GAASFLAGKRFTRPRTRREYSQWVETLNQEN-NDLTSTS---------------EVDQQEQLLDTLMLGLRLQKGIDLSAIERQYGSECVKKITSVLSPYLDRNWV 365
BLAST of mRNA_D-dudresnayi_contig10414.445.1 vs. uniprot
Match: K9S4J9_9CYAN (Heme chaperone HemW n=1 Tax=Geitlerinema sp. PCC 7407 TaxID=1173025 RepID=K9S4J9_9CYAN) HSP 1 Score: 65.9 bits (159), Expect = 2.520e-9 Identity = 41/109 (37.61%), Postives = 54/109 (49.54%), Query Frame = 1 Query: 1 GAASYVDGRRFSRPRGLPEYGRWVDKLEAEGWTSATATAAEXXXXXXXXXXPSDEAVEKDSLLDDVMLGFRLMEGLDLDAICTKYGDDAAMGVEAGVAEGLQRGWVLHD 327 GAAS +DG+RF+RPR EY W+D+ EA+ + PS E D LLD +MLG RL EG+D AI ++G + +A Q GWV D Sbjct: 275 GAASCLDGQRFTRPRTRSEYFAWIDRYEAD---------PQGAIADPENPAPS----ETDRLLDTLMLGLRLAEGVDAGAIAQRFGPAVLTSIHQTLAPYEQEGWVAWD 370
BLAST of mRNA_D-dudresnayi_contig10414.445.1 vs. uniprot
Match: A0A2P6TFS6_CHLSO (Radical S-adenosyl methionine domain-containing protein 1, mitochondrial n=3 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TFS6_CHLSO) HSP 1 Score: 65.5 bits (158), Expect = 4.780e-9 Identity = 43/111 (38.74%), Postives = 59/111 (53.15%), Query Frame = 1 Query: 1 GAASYVDGRRFSRPRGLPEYGRWVDKLEAEGWTSATATAAEXXXXXXXXXXPSDEAVEKDSLLDDVMLGFRLMEGLDLDAICTKY--GDDAAMGVEAGVAEGLQRGWVLHD 327 GAASY++GRRFSRP+ L Y +WV++ +G A P + D LLD VML RL +GLDL + T++ G++AA V + + RGWVL D Sbjct: 4181 GAASYLEGRRFSRPKRLNAYRQWVEQYAGDGEAQDPQVAGSWL--------PRESG--DDRLLDTVMLRLRLADGLDLRQLATQHAQGEEAADIVLHALQPHIARGWVLAD 4281
BLAST of mRNA_D-dudresnayi_contig10414.445.1 vs. uniprot
Match: A0A3M1P741_9CYAN (Heme chaperone HemW n=1 Tax=Cyanobacteria bacterium J069 TaxID=2420337 RepID=A0A3M1P741_9CYAN) HSP 1 Score: 63.9 bits (154), Expect = 1.180e-8 Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 1 Query: 1 GAASYVDGRRFSRPRGLPEYGRWVDKLEAEGWTSATATAAEXXXXXXXXXXPSDEAVEKDSLLDDVMLGFRLMEGLDLDAICTKYGDDAAMGVEAGVAEGLQRGWV 318 GAASYV+ +RFSRPR EY W++ LEA G + + K+ LLD +MLG RL +GL+LD + ++G+ A + + ++RGWV Sbjct: 292 GAASYVNHQRFSRPRTRREYFTWLETLEAAGGS-----------------LDCPPTLPKERLLDTLMLGLRLADGLNLDILTAEFGEAAIAPLLPRLQTHIERGWV 380
BLAST of mRNA_D-dudresnayi_contig10414.445.1 vs. uniprot
Match: A0A7J7PF65_9CHLO (HemN_C domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PF65_9CHLO) HSP 1 Score: 63.5 bits (153), Expect = 1.210e-8 Identity = 45/133 (33.83%), Postives = 63/133 (47.37%), Query Frame = 1 Query: 1 GAASYVDGRRFSRPRGLPEYGRWVDK-LEAEGWTSATATAAEXXXXXXXXXXPSDEAVEKDSLLDDVMLGFRLMEGLDLDAICTKYGDDAAMGVEAGVAEGLQRGWVL---------HDGKVEAKGIVADTEG 369 GAASY GRRFSRPRG+ EY WV + +++ G A A AE +++ LLD +ML RL +GL L ++ +YG D + + LQ G + D E G V+D +G Sbjct: 142 GAASYTQGRRFSRPRGMHEYESWVQRFVQSGGGCPAAALPAES---------------KEEQLLDLIMLSLRLSDGLALHSVQQEYGQDTVASLLPTIQGFLQEGLMQIVPELQQSGDDSAPEPGGCVSDADG 259
BLAST of mRNA_D-dudresnayi_contig10414.445.1 vs. uniprot
Match: A0A7J7PEC9_9CHLO (Radical S-adenosyl methionine domain-containing protein 1, mitochondrial n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PEC9_9CHLO) HSP 1 Score: 63.5 bits (153), Expect = 1.620e-8 Identity = 45/133 (33.83%), Postives = 63/133 (47.37%), Query Frame = 1 Query: 1 GAASYVDGRRFSRPRGLPEYGRWVDK-LEAEGWTSATATAAEXXXXXXXXXXPSDEAVEKDSLLDDVMLGFRLMEGLDLDAICTKYGDDAAMGVEAGVAEGLQRGWVL---------HDGKVEAKGIVADTEG 369 GAASY GRRFSRPRG+ EY WV + +++ G A A AE +++ LLD +ML RL +GL L ++ +YG D + + LQ G + D E G V+D +G Sbjct: 250 GAASYTQGRRFSRPRGMHEYESWVQRFVQSGGGCPAAALPAES---------------KEEQLLDLIMLSLRLSDGLALHSVQQEYGQDTVASLLPTIQGFLQEGLMQIVPELQQSGDDSAPEPGGCVSDADG 367
BLAST of mRNA_D-dudresnayi_contig10414.445.1 vs. uniprot
Match: A0A367QS50_9NOSO (Heme chaperone HemW n=2 Tax=Nostocaceae TaxID=1162 RepID=A0A367QS50_9NOSO) HSP 1 Score: 63.2 bits (152), Expect = 2.130e-8 Identity = 39/106 (36.79%), Postives = 52/106 (49.06%), Query Frame = 1 Query: 1 GAASYVDGRRFSRPRGLPEYGRWVDKLEAEGWTSATATAAEXXXXXXXXXXPSDEAVEKDSLLDDVMLGFRLMEGLDLDAICTKYGDDAAMGVEAGVAEGLQRGWV 318 GAASYVDG+RF+RPR EY RWV L A G P +E LL+ +MLG RL EGL+L + K+G+ + + ++GWV Sbjct: 279 GAASYVDGKRFTRPRKTQEYYRWVQDLIANGGV------------IDWEVTPPEEI-----LLETLMLGLRLAEGLNLADLVEKFGEQKVKEIHKCLRSHFEKGWV 367
BLAST of mRNA_D-dudresnayi_contig10414.445.1 vs. uniprot
Match: A0A6M8B2M9_9CYAN (Heme chaperone HemW n=3 Tax=Thermoleptolyngbya TaxID=2303528 RepID=A0A6M8B2M9_9CYAN) HSP 1 Score: 63.2 bits (152), Expect = 2.180e-8 Identity = 43/106 (40.57%), Postives = 55/106 (51.89%), Query Frame = 1 Query: 1 GAASYVDGRRFSRPRGLPEYGRWVDKLEAEGWTSATATAAEXXXXXXXXXXPSDEAVEKDSLLDDVMLGFRLMEGLDLDAICTKYGDDAAMGVEAGVAEGLQRGWV 318 GAASYV+ +RFSRPR EY +WV+ LEA G A T P E LLD +MLG RL +GLDL + ++G A + + +QRGWV Sbjct: 292 GAASYVNHQRFSRPRTRREYFQWVETLEAAGGRLAHPTT------------PPQER-----LLDTLMLGLRLADGLDLLRLELEFGKGAIARILTCLQPYVQRGWV 380 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10414.445.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10414.445.1 >prot_D-dudresnayi_contig10414.445.1 ID=prot_D-dudresnayi_contig10414.445.1|Name=mRNA_D-dudresnayi_contig10414.445.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=187bp GAASYVDGRRFSRPRGLPEYGRWVDKLEAEGWTSATATAAEGGGGEGGGGback to top mRNA from alignment at D-dudresnayi_contig10414:964..2272- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10414.445.1 ID=mRNA_D-dudresnayi_contig10414.445.1|Name=mRNA_D-dudresnayi_contig10414.445.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1309bp|location=Sequence derived from alignment at D-dudresnayi_contig10414:964..2272- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10414:964..2272- >mRNA_D-dudresnayi_contig10414.445.1 ID=mRNA_D-dudresnayi_contig10414.445.1|Name=mRNA_D-dudresnayi_contig10414.445.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1122bp|location=Sequence derived from alignment at D-dudresnayi_contig10414:964..2272- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |