mRNA_D-dudresnayi_contig10362.386.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10362.386.1
Unique NamemRNA_D-dudresnayi_contig10362.386.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10362.386.1 vs. uniprot
Match: A0A7S3H0V4_9STRA (Glutathione peroxidase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H0V4_9STRA)

HSP 1 Score: 208 bits (529), Expect = 2.040e-66
Identity = 94/132 (71.21%), Postives = 110/132 (83.33%), Query Frame = 1
Query:    7 LLIVNVASRCGYTHTNYKQLREMYETLHDRGLEILAFPSNQFGNQEPGTDEEIQNFCKSYGVSFPVFSKIDVNGPDAHPLYKYLKKKTGGTELAWNFFKILVVDGVPVRRYKANVSPKDITQDLLPYLEPTN 402
            +LIVNVAS CGYT  NY+ LRE+Y+ LH++GLEILAFPSNQF NQEPGTD EIQ FCK+ GV FPVFSKI+VNGP AHPLYKYLK+KTG  E+ WNF KILVV+G+PVRRY A+V P D+  DL+ YLEP +
Sbjct:   44 ILIVNVASNCGYTQKNYRGLREIYDNLHEKGLEILAFPSNQFKNQEPGTDSEIQEFCKNNGVVFPVFSKINVNGPSAHPLYKYLKRKTGSLEIRWNFNKILVVNGIPVRRYSADVDPSDMVPDLMKYLEPAS 175          
BLAST of mRNA_D-dudresnayi_contig10362.386.1 vs. uniprot
Match: A0A1I2KIS2_9BACL (Glutathione peroxidase n=2 Tax=Planifilum TaxID=332100 RepID=A0A1I2KIS2_9BACL)

HSP 1 Score: 153 bits (386), Expect = 5.740e-45
Identity = 77/136 (56.62%), Postives = 99/136 (72.79%), Query Frame = 1
Query:    1 QLLLIVNVASRCGYTHTNYKQLREMYETLHDRGLEILAFPSNQFGNQEPGTDEEIQNFCKS-YGVSFPVFSKIDVNGPDAHPLYKYLKKKTGGT---ELAWNFFKILVVD-GVPVRRYKANVSPKDITQDLLPYLE 393
            ++LLIVN ASRCG+T   Y++L+E+YET  DRGLEILAFP NQF NQEPG++EEIQ FC++ Y V+FP+FSK+ V GPDAHPL+KYL +   G    E+ WNF K LV   G  V+RY    SP+ I +D+  +LE
Sbjct:   24 RVLLIVNTASRCGFT-PQYRELQELYETYRDRGLEILAFPCNQFANQEPGSEEEIQKFCETQYNVTFPLFSKVKVKGPDAHPLFKYLTESAPGMLGKEIKWNFTKFLVNRRGEVVKRYAPQTSPRRIARDIEEWLE 158          
BLAST of mRNA_D-dudresnayi_contig10362.386.1 vs. uniprot
Match: K3WSD1_GLOUD (Glutathione peroxidase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSD1_GLOUD)

HSP 1 Score: 154 bits (389), Expect = 1.140e-44
Identity = 74/141 (52.48%), Postives = 98/141 (69.50%), Query Frame = 1
Query:    7 LLIVNVASRCGYTHTNYKQLREMYETLHDRGLEILAFPSNQFGNQEPGTDEEIQNFCKS-YGVSFPVFSKIDVNGPDAHPLYKYLKKKTGG---TELAWNFFKILVVDGVPVRRYKANVSPKDITQDLLPYL---EPTNTD 408
            +L+VNVAS CGYT  NYK+L+ +YE  H++GLEILAFP NQFG+QE GT  +I  F +  Y V+FPVF+K+DVNG +AHPL+ +LK K  G   + + WNF K L+VDGVP +RY    SP  + QD++  L   EP+  D
Sbjct:   70 ILVVNVASACGYTDQNYKELQALYEKYHEQGLEILAFPCNQFGSQESGTQAQIMQFVEEHYHVTFPVFAKVDVNGANAHPLFTFLKSKLSGFITSNIKWNFSKFLIVDGVPFKRYATTTSPLAMEQDIVQALHQQEPSGND 210          
BLAST of mRNA_D-dudresnayi_contig10362.386.1 vs. uniprot
Match: UPI001F0405A9 (probable phospholipid hydroperoxide glutathione peroxidase n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F0405A9)

HSP 1 Score: 153 bits (386), Expect = 1.560e-44
Identity = 73/137 (53.28%), Postives = 98/137 (71.53%), Query Frame = 1
Query:    4 LLLIVNVASRCGYTHTNYKQLREMYETLHDRGLEILAFPSNQFGNQEPGTDEEIQNFCKSYGVSFPVFSKIDVNGPDAHPLYKYLKKKTGG---TELAWNFFKILV-VDGVPVRRYKANVSPKDITQDLLPYLEPTN 402
            +LLIVNVAS+CG+T++NY QL+++++   ++GL ILAFP NQFG QEPG +EEI+ F K + V F +FSKIDVNGP+A PLY YLKK  GG    ++ WNF K L   DGVP +RY    SPK +  D++  LE ++
Sbjct:   56 VLLIVNVASKCGFTNSNYPQLQDLHKKYAEKGLRILAFPCNQFGCQEPGNEEEIKEFVKGFSVDFDMFSKIDVNGPNADPLYVYLKKAKGGFLLDKIKWNFTKFLCDKDGVPYKRYAPTTSPKSLESDIMTLLEKSS 192          
BLAST of mRNA_D-dudresnayi_contig10362.386.1 vs. uniprot
Match: A0A167YWZ4_9BACI (Glutathione peroxidase n=4 Tax=Bacillaceae TaxID=186817 RepID=A0A167YWZ4_9BACI)

HSP 1 Score: 151 bits (382), Expect = 2.120e-44
Identity = 75/135 (55.56%), Postives = 95/135 (70.37%), Query Frame = 1
Query:    4 LLLIVNVASRCGYTHTNYKQLREMYETLHDRGLEILAFPSNQFGNQEPGTDEEIQNFCKSYGVSFPVFSKIDVNGPDAHPLYKYLKKKTGGT----ELAWNFFKILVV-DGVPVRRYKANVSPKDITQDLLPYLE 393
            ++LIVN AS CG+T   YK L+ +YET  ++G  +LAFP NQFGNQEPGTDEEIQ FC++YGV+FPVFSKIDV GP+AHPL+ YL ++  G      + WNF K L+  DG PV R+    +PKDI     PY+E
Sbjct:   25 VMLIVNTASYCGFTE-QYKDLQNLYETYKEKGFVVLAFPCNQFGNQEPGTDEEIQTFCENYGVTFPVFSKIDVRGPNAHPLFVYLTEQIPGVFGTKMIKWNFTKFLIDRDGNPVERFVPQTNPKDIA----PYIE 154          
BLAST of mRNA_D-dudresnayi_contig10362.386.1 vs. uniprot
Match: A0A1V9ZWS9_9STRA (Glutathione peroxidase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWS9_9STRA)

HSP 1 Score: 152 bits (383), Expect = 2.830e-44
Identity = 71/139 (51.08%), Postives = 97/139 (69.78%), Query Frame = 1
Query:    7 LLIVNVASRCGYTHTNYKQLREMYETLHDRGLEILAFPSNQFGNQEPGTDEEIQNFCKSYGVSFPVFSKIDVNGPDAHPLYKYLKKKTGGT---ELAWNFFKILVVDGVPVRRYKANVSPKDITQDLLPYLEPTNTDEL 414
            +L+VNVAS CG+T++NYK+L+ +Y   H++GLEILAFP NQFG QEPG+ EEI  F + Y V+FP+F KIDVNG +A PL+KYLK +  GT   ++ WNF K L+  G P +RY    SP  I + ++  L+  N +EL
Sbjct:   40 ILVVNVASACGFTNSNYKELQTLYNKYHEKGLEILAFPCNQFGGQEPGSYEEILAFTQKYEVTFPIFQKIDVNGDNADPLFKYLKAELTGTITNDIKWNFTKFLIAYGNPYKRYATTTSPLGIEKAIVHILDSQNHEEL 178          
BLAST of mRNA_D-dudresnayi_contig10362.386.1 vs. uniprot
Match: A0A8F4FU25_9ACTN (Glutathione peroxidase n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4FU25_9ACTN)

HSP 1 Score: 151 bits (381), Expect = 3.300e-44
Identity = 71/134 (52.99%), Postives = 101/134 (75.37%), Query Frame = 1
Query:    7 LLIVNVASRCGYTHTNYKQLREMYETLHDRGLEILAFPSNQFGNQEPGTDEEIQNFCK-SYGVSFPVFSKIDVNGPDAHPLYKYLKKKTGG---TELAWNFFKILV-VDGVPVRRYKANVSPKDITQDLLPYLE 393
            +L+VN AS+CG+T   YK L E+Y+   D+GL +L FP +QFG+QEPGT++EIQ FC+ ++GV+FP+F+K+DVNG DAHPLYK+LK++ GG   +++ WNF K LV  DGVP++RY +   P+ IT D+   LE
Sbjct:   27 VLVVNTASKCGFT-PQYKGLEEIYKKYEDQGLVVLGFPCDQFGHQEPGTEDEIQEFCEVNFGVTFPLFAKVDVNGDDAHPLYKWLKEEKGGAIGSKIKWNFTKFLVGKDGVPIKRYASTTKPEKITSDIEKALE 159          
BLAST of mRNA_D-dudresnayi_contig10362.386.1 vs. uniprot
Match: A0A7R9ME77_9ACAR (Glutathione peroxidase n=2 Tax=Oppiella nova TaxID=334625 RepID=A0A7R9ME77_9ACAR)

HSP 1 Score: 150 bits (378), Expect = 1.880e-43
Identity = 68/125 (54.40%), Postives = 89/125 (71.20%), Query Frame = 1
Query:    7 LLIVNVASRCGYTHTNYKQLREMYETLHDRGLEILAFPSNQFGNQEPGTDEEIQNFCKSYGVSFPVFSKIDVNGPDAHPLYKYLKKKTGGTELAWNFFKILV-VDGVPVRRYKANVSPKDITQDL 378
            +L+VNVAS+CG T TNY+QL E+Y   +DRG  I+AFPSN+F  QEPG + EI+ F   Y V F + +KI VNG DAHPLYK+LK K G  ++ WNF K L+  +GVP++RY   V+PKDI  D+
Sbjct:   51 VLVVNVASKCGLTDTNYRQLNELYTNYNDRGFRIIAFPSNEFKKQEPGCNAEIKEFAMKYDVKFDMMTKIKVNGDDAHPLYKWLKNKQGLDDIEWNFAKFLIDQNGVPIKRYAPTVAPKDIESDV 175          
BLAST of mRNA_D-dudresnayi_contig10362.386.1 vs. uniprot
Match: C8WRC2_ALIAD (Glutathione peroxidase n=7 Tax=Alicyclobacillus TaxID=29330 RepID=C8WRC2_ALIAD)

HSP 1 Score: 149 bits (376), Expect = 2.200e-43
Identity = 73/132 (55.30%), Postives = 97/132 (73.48%), Query Frame = 1
Query:    1 QLLLIVNVASRCGYTHTNYKQLREMYETLHDRGLEILAFPSNQFGNQEPGTDEEIQNFCKS-YGVSFPVFSKIDVNGPDAHPLYKYLKKKT----GGTELAWNFFKILVV-DGVPVRRYKANVSPKDITQDL 378
            ++LLIVN AS+CG+T   Y+ L+++YE   DRG E+LAFP NQFGNQEPG++EEIQ FC + Y V+FPVF+K+DVNGP+AHPL++YLKK+     G   + WNF K LV  DG  V+RY    SP+ I +D+
Sbjct:   24 KVLLIVNTASKCGFT-PQYEGLQKLYELYRDRGFEVLAFPCNQFGNQEPGSNEEIQTFCSTTYRVTFPVFAKVDVNGPNAHPLFEYLKKQAKGALGSEAIKWNFTKFLVDRDGRVVKRYAPQTSPESIREDI 154          
BLAST of mRNA_D-dudresnayi_contig10362.386.1 vs. uniprot
Match: M4B8U8_HYAAE (Glutathione peroxidase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B8U8_HYAAE)

HSP 1 Score: 150 bits (380), Expect = 2.400e-43
Identity = 67/133 (50.38%), Postives = 95/133 (71.43%), Query Frame = 1
Query:    4 LLLIVNVASRCGYTHTNYKQLREMYETLHDRGLEILAFPSNQFGNQEPGTDEEIQNFCKS-YGVSFPVFSKIDVNGPDAHPLYKYLKKKTGG---TELAWNFFKILVVDGVPVRRYKANVSPKDITQDLLPYL 390
            ++L+VNVAS CGYT  NY++L+E+YE  HD G  +L FP NQFG QEPGT+++I  F K  Y V+FP+F+K+DVNG  AHPL+++LKK+  G    ++ WNF K L+V+  PV+RY    SP +I +D++  L
Sbjct:   57 VILVVNVASECGYTDKNYRELQELYEKYHDEGFMVLGFPCNQFGGQEPGTNDDIMKFTKEKYHVTFPLFTKVDVNGDKAHPLFQFLKKRLDGFVTNDIKWNFTKFLIVNHEPVKRYGTTTSPLEIEKDIMQAL 189          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10362.386.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3H0V4_9STRA2.040e-6671.21Glutathione peroxidase n=1 Tax=Spumella elongata T... [more]
A0A1I2KIS2_9BACL5.740e-4556.62Glutathione peroxidase n=2 Tax=Planifilum TaxID=33... [more]
K3WSD1_GLOUD1.140e-4452.48Glutathione peroxidase n=1 Tax=Globisporangium ult... [more]
UPI001F0405A91.560e-4453.28probable phospholipid hydroperoxide glutathione pe... [more]
A0A167YWZ4_9BACI2.120e-4455.56Glutathione peroxidase n=4 Tax=Bacillaceae TaxID=1... [more]
A0A1V9ZWS9_9STRA2.830e-4451.08Glutathione peroxidase n=1 Tax=Thraustotheca clava... [more]
A0A8F4FU25_9ACTN3.300e-4452.99Glutathione peroxidase n=1 Tax=Aquihabitans sp. G1... [more]
A0A7R9ME77_9ACAR1.880e-4354.40Glutathione peroxidase n=2 Tax=Oppiella nova TaxID... [more]
C8WRC2_ALIAD2.200e-4355.30Glutathione peroxidase n=7 Tax=Alicyclobacillus Ta... [more]
M4B8U8_HYAAE2.400e-4350.38Glutathione peroxidase n=1 Tax=Hyaloperonospora ar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10362contigD-dudresnayi_contig10362:6765..7263 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score153.7
Seed ortholog evalue6.4e-35
Seed eggNOG ortholog65071.PYU1_T007875
KEGG rclassRC00011,RC00982
KEGG koko:K00432
KEGG ReactionR00274,R07034,R07035
KEGG Pathwayko00480,ko00590,ko04918,map00480,map00590,map04918
EggNOG free text desc.Glutathione peroxidase
EggNOG OGs1MGPI@121069,COG0386@1,KOG1651@2759
EC1.11.1.9
COG Functional cat.O
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons2
Model size417
Cds size417
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927534.9119942-CDS-D-dudresnayi_contig10362:6764..69771622927534.9119942-CDS-D-dudresnayi_contig10362:6764..6977Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10362 6765..6977 +
1690556797.1411445-CDS-D-dudresnayi_contig10362:6764..69771690556797.1411445-CDS-D-dudresnayi_contig10362:6764..6977Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10362 6765..6977 +
1622927534.9252133-CDS-D-dudresnayi_contig10362:7059..72631622927534.9252133-CDS-D-dudresnayi_contig10362:7059..7263Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10362 7060..7263 +
1690556797.1503375-CDS-D-dudresnayi_contig10362:7059..72631690556797.1503375-CDS-D-dudresnayi_contig10362:7059..7263Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10362 7060..7263 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10362.386.1prot_D-dudresnayi_contig10362.386.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10362 6765..7263 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10362.386.1

>prot_D-dudresnayi_contig10362.386.1 ID=prot_D-dudresnayi_contig10362.386.1|Name=mRNA_D-dudresnayi_contig10362.386.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=139bp
QLLLIVNVASRCGYTHTNYKQLREMYETLHDRGLEILAFPSNQFGNQEPG
TDEEIQNFCKSYGVSFPVFSKIDVNGPDAHPLYKYLKKKTGGTELAWNFF
KILVVDGVPVRRYKANVSPKDITQDLLPYLEPTNTDEL*
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mRNA from alignment at D-dudresnayi_contig10362:6765..7263+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10362.386.1 ID=mRNA_D-dudresnayi_contig10362.386.1|Name=mRNA_D-dudresnayi_contig10362.386.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=499bp|location=Sequence derived from alignment at D-dudresnayi_contig10362:6765..7263+ (Desmarestia dudresnayi DdudBR16 monoicous)
CAATTATTATTGATAGTTAATGTGGCCAGCAGATGTGGATATACACACAC GAATTACAAACAATTGCGGGAAATGTATGAGACTCTGCATGATCGAGGCC TCGAAATTCTAGCATTCCCATCTAATCAGTTTGGAAATCAAGAGCCTGGA ACCGATGAGGAAATTCAAAACTTCTGTAAGAGTTATGGAGTCAGCTTTCC TGTATTTTCCAAGGTACTGTATGAAAAATGAAACTTCAATTTGAATTTCT ATACAGTAACAAACACATCTTATTCTTTCATATTTTTTGTATCAGATTGA TGTCAATGGTCCTGATGCTCATCCATTATATAAGTATCTTAAAAAGAAGA CTGGTGGTACAGAGCTCGCATGGAATTTCTTTAAGATTCTGGTTGTAGAT GGGGTACCTGTGCGGCGCTATAAAGCTAATGTGTCCCCCAAAGATATCAC ACAGGATCTACTACCTTATCTGGAACCTACTAATACAGATGAACTATAA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10362:6765..7263+

>mRNA_D-dudresnayi_contig10362.386.1 ID=mRNA_D-dudresnayi_contig10362.386.1|Name=mRNA_D-dudresnayi_contig10362.386.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=834bp|location=Sequence derived from alignment at D-dudresnayi_contig10362:6765..7263+ (Desmarestia dudresnayi DdudBR16 monoicous)
CAATTATTATTGATAGTTAATGTGGCCAGCAGATGTGGATATACACACAC
GAATTACAAACAATTGCGGGAAATGTATGAGACTCTGCATGATCGAGGCC
TCGAAATTCTAGCATTCCCATCTAATCAGTTTGGAAATCAAGAGCCTGGA
ACCGATGAGGAAATTCAAAACTTCTGTAAGAGTTATGGAGTCAGCTTTCC
TGTATTTTCCAAGCAATTATTATTGATAGTTAATGTGGCCAGCAGATGTG
GATATACACACACGAATTACAAACAATTGCGGGAAATGTATGAGACTCTG
CATGATCGAGGCCTCGAAATTCTAGCATTCCCATCTAATCAGTTTGGAAA
TCAAGAGCCTGGAACCGATGAGGAAATTCAAAACTTCTGTAAGAGTTATG
GAGTCAGCTTTCCTGTATTTTCCAAGATTGATGTCAATGGTCCTGATGCT
CATCCATTATATAAGTATCTTAAAAAGAAGACTGGTGGTACAGAGCTCGC
ATGGAATTTCTTTAAGATTCTGGTTGTAGATGGGGTACCTGTGCGGCGCT
ATAAAGCTAATGTGTCCCCCAAAGATATCACACAGGATCTACTACCTTAT
CTGGAACCTACTAATACAGATGAACTATAAATTGATGTCAATGGTCCTGA
TGCTCATCCATTATATAAGTATCTTAAAAAGAAGACTGGTGGTACAGAGC
TCGCATGGAATTTCTTTAAGATTCTGGTTGTAGATGGGGTACCTGTGCGG
CGCTATAAAGCTAATGTGTCCCCCAAAGATATCACACAGGATCTACTACC
TTATCTGGAACCTACTAATACAGATGAACTATAA
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