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Homology
BLAST of mRNA_D-dudresnayi_contig10359.378.1 vs. uniprot
Match: A0A6H5KGW4_9PHAE (WS_DGAT_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGW4_9PHAE) HSP 1 Score: 247 bits (631), Expect = 4.760e-76 Identity = 131/214 (61.21%), Postives = 161/214 (75.23%), Query Frame = 2
Query: 2 GRKSRSRGRPMTFTSGYMSVGSWPTDIKMSDPVITAFMFFDSVPQQAAVEEACSKILRYHNFRGVPRCRRLSWFPPWFFSRFEWHDIEVRPADVITRVQANGSAEVLVEMDRVKDAPIPRTTSDGRDMPMWSLHIIENTGTVEAGVGC-VIALRVHHTIGDGMSLVAVAQSVLEAATGGPIGQGGGNGAGTGGALANGCKPEGRNLSNFSVGKV 640
GR+SRSRGR M+F SGYMS+GSWP DIKM+DP+ITAFMF D VP+ A +EE CSK+LR NF+ +P R S + +RFEW DIEV+P++VIT V+A GSA VL EMDRVKDAP+ + T DGR++P+W LH+IENT EAGVG V+ALRVHHT+GDGMSLV V++SVLEAA GG +G G NG+ A+ KP R LSNFS GK+
Sbjct: 29 GRRSRSRGRSMSFGSGYMSIGSWPQDIKMNDPIITAFMFLDGVPKLADLEEVCSKVLRNENFKALPVRRAWS-----YSTRFEWRDIEVKPSEVITSVKAKGSAAVLAEMDRVKDAPLRQATFDGRELPLWGLHLIENTAEGEAGVGAAVLALRVHHTLGDGMSLVGVSRSVLEAAGGGELGAGL-NGSSAAEAVV---KPANRGLSNFSAGKI 233
BLAST of mRNA_D-dudresnayi_contig10359.378.1 vs. uniprot
Match: D7FXD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXD5_ECTSI) HSP 1 Score: 235 bits (600), Expect = 1.140e-75 Identity = 123/204 (60.29%), Postives = 153/204 (75.00%), Query Frame = 2
Query: 32 MTFTSGYMSVGSWPTDIKMSDPVITAFMFFDSVPQQAAVEEACSKILRYHNFRGVPRCRRLSWFPPWFFSRFEWHDIEVRPADVITRVQANGSAEVLVEMDRVKDAPIPRTTSDGRDMPMWSLHIIENTGTVEAGVGC-VIALRVHHTIGDGMSLVAVAQSVLEAATGGPIGQGGGNGAGTGGALANGCKPEGRNLSNFSVGKV 640
M+F SGYMS+GSWP D+KMSDP+ITAFMF D VP+ A +EE CSK+LR+ NF+ +P R S + +RFEW DIEV+P+DVIT V+A+GSA VL EMDRVKD P+ + T DGR++P+W LH+IENT EAGVG V+ALRVHHT+GDGMS+V V++SVLEAA GG +G G NG+ A+ KP R LSNFS GKV
Sbjct: 1 MSFGSGYMSIGSWPQDVKMSDPIITAFMFLDGVPKLADLEEVCSKVLRHENFKALPVRRAWS-----YSTRFEWRDIEVKPSDVITSVKADGSAAVLAEMDRVKDTPLRQATFDGRELPLWGLHLIENTAEGEAGVGAAVLALRVHHTLGDGMSMVGVSRSVLEAAGGGELGAGL-NGSSAAEAVV---KPANRGLSNFSTGKV 195
BLAST of mRNA_D-dudresnayi_contig10359.378.1 vs. uniprot
Match: A0A7S2W284_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W284_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 3.120e-8 Identity = 48/176 (27.27%), Postives = 79/176 (44.89%), Query Frame = 2
Query: 5 RKSRSRGRPMTFTSGYMSVGSWPTDIKMSDPVITAFMFFDSVPQQAAVEEACSKILRYHNFRGVPRCRRLSWFPPWFFSRFEWHDIEVRPADVITRVQANGSAEVLVEMDRVKDAPIPRTTSDGRDMPMWSLHIIENTGTVEAGVGCVIALRVHHTIGDGMSLVAVAQSVLEAATG 532
R+ +R R ++F S M S+P + M DP+I A + P + + + +K+ + F VP R F E ++++ A +I A+G A RV++ + + D P W + +I+ E G +I R+HH IGDG+SLV +V A G
Sbjct: 27 REQGTRPRALSFNSAVMMQSSFPAAVNMIDPLINATLTLQRAPSKEQMVQMLTKLKTFDRFMAVPTRGRGGCF-------MERQEVDIE-AHLIWDKCADGQAA----WRRVEEVILTPLSIDKTASPWWEIVVIQP----ENGDQTIILFRIHHIIGDGISLVQAMNTVFSDANG 186
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 60.5 |
| Seed ortholog evalue | 1.1e-06 |
| Seed eggNOG ortholog | 2850.Phatr49708 |
| EggNOG free text desc. | Protein of unknown function (DUF1298) |
| EggNOG OGs | 2CY8S@1,2S2TJ@2759 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-18_000010.1 |
| Exons | 5 |
| Model size | 640 |
| Cds size | 609 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927533.8989987-UTR-D-dudresnayi_contig10359:4856..4887 | 1622927533.8989987-UTR-D-dudresnayi_contig10359:4856..4887 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig10359 4857..4887 - |
| 1690556796.6447468-UTR-D-dudresnayi_contig10359:4856..4887 | 1690556796.6447468-UTR-D-dudresnayi_contig10359:4856..4887 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig10359 4857..4887 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10359.378.1 >prot_D-dudresnayi_contig10359.378.1 ID=prot_D-dudresnayi_contig10359.378.1|Name=mRNA_D-dudresnayi_contig10359.378.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=203bp
MTFTSGYMSVGSWPTDIKMSDPVITAFMFFDSVPQQAAVEEACSKILRYH
NFRGVPRCRRLSWFPPWFFSRFEWHDIEVRPADVITRVQANGSAEVLVEM
DRVKDAPIPRTTSDGRDMPMWSLHIIENTGTVEAGVGCVIALRVHHTIGD
GMSLVAVAQSVLEAATGGPIGQGGGNGAGTGGALANGCKPEGRNLSNFSV
GKV back to topmRNA from alignment at D-dudresnayi_contig10359:319..4887- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-dudresnayi_contig10359.378.1 ID=mRNA_D-dudresnayi_contig10359.378.1|Name=mRNA_D-dudresnayi_contig10359.378.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=4569bp|location=Sequence derived from alignment at D-dudresnayi_contig10359:319..4887- (Desmarestia dudresnayi DdudBR16 monoicous)
AGGGCGGAAATCAAGGTCTCGGGGCAGGCCCATGACCTTTACGAGCGGAT
ACATGTCCGTTGGGTCGTGGCCCACAGACATCAAAATGTCCGATCCCGTC
ATCACGGCCTTCATGTGAGCCACGAATATCGCGACATACAAAGAAAATAC
ACATTGTCTTATGGTACGAGCATCCAGTAACACTATGTAATTTCAGTTGG
CCTTATCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCAACGTCNNNNNNNACATAAAAAAAAAA
AACATATTTTTTTTTTTTTCAGTCATCCTCTTATCACTTTTGATTTCTGT
TTGCCTTCTTCCCCCCCCCCCCCCCCCCCGGAGCGGATAACGCCCTTGTA
CAAGGCGATCCAGTGTATACTGTAGAGGAGGGCGCCACGAATTTTTGTAT
TTGTATGGCCATATTTTTGCTTCTGGGAGAGTTCTTGTCGGCAGACCATT
TTACATCTTGCCACGCGCTCTACGCGCTACCGCTGCCGAGGCGCTCCCTC
TGTAAAGTTATGTAAAGTCGCCCTTGACCCCCCACCCCACACACACAACA
CACGGCAGGTTTTTCGACAGCGTGCCGCAGCAGGCGGCAGTGGAGGAGGC
GTGCTCTAAAATACTGCGCTACCACAACTTTCGTGGCGTGCCCCGATGCC
GGCGGTTGAGTTGGTTTCCTCCGTGGTTCTTCTCGCGTTTTGAGTGGCAC
GACATTGAGGTCAGTCCGCCCGCCCGCCCGCCCGCCTGCTTCCTTGCTCC
TCTCATCGAACAGTAGCGGGGTAGGCGTTTTTTGGGGGTCGCGGGGTTGG
GAGAATGGGGAGTGGTTCGAGGTATGTCTGTAGGTCGGCCGCGAGTCATC
GACGTGGTGGCCGAGCCAATGCACAGACTATGGCAGATGGTTGGCTGATG
CAGGGTTGGCGCAATGCGCTTTTTTTTGTTTTTTGGTGCGTGTGTCGGTG
CGGACTGGAGAGTGAGCTGGCTAGTCTTGACGAACGGTTTTTGTGGTGTC
AACGGAGCTTAATACAGCAGTCGTTGCGGGGCGAGGGGCGATCATATATT
TTACTTGACGTGTGCCATTTTTTGTTGCAGCGCACGCTGATTTTGAGGGC
TCTTCGTTTTTGTTTTGAGTGTATGTGTTTGTGTTGTACGGTGTCTGTTT
GGCGAAGTCACGTTCGGGGCTAGGCCGGGTTTGGATTCGGCGTTTTTCGA
CACGGTTGTTTCGCCCATGGTGGCGCGTTTGGAGTGCGCACGCCCACACA
CAAGCCCACTGCACCTGTTCTTGAAGCGATGGGGGGGGGGGGGGGGGGGG
GGGATCTTGGTGTGGTGGGGTGGGGGGGGGGGGTTTTTTTTTTTTTTTTT
GTNNNNNNNNNNCCGCGTCGGGGCCGCATCGCGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGCACTCAATTCTGGTGATGATGGTCA
CGTGTGCTTGATTATTTTGTTTCTAAGTGTTGTTGGAGAATTGAAAATTC
CAAAACCTCGGGCCTTTTTTTCTTTTTCTTGTTGAATTGTGTGCGACAGG
TTCGACCTGCTGACGTCATTACTCGGGTGCAGGCGAATGGGTCGGCAGAG
GTTCTTGTGGAGATGGACCGTGTCAAGGACGCCCCCATCCCTCGAACCAC
GTCCGACGGAAGGTATGTATGATTGATGATGAACACATTTACCGCTGTGT
CGTAATATATGACTTTGTTTTGTGGTCGAATGTTTGCGCCCTCTAAATGG
TATATTCACAGCGCACGAAAACATACACCGCTTGAATTCGTGTGCTTGGT
ACACATTTTCGAGTAGGTATCCGCCACGTGAGGCAGAACGGACACGAGTT
TCCTCTACTTTGTTTCAGGGAATCATACCTTTGGGAAAAGGCTTCGTGGA
GATAGAGCGGCCTATGAAGTGGGTGCGGTTACCGCACAATATGTTGGATT
TGGTCCGTGCTCTGATGCGGCGTATAATGTGGTGTTTTCTTTTTTAAGCG
TTACTCTGCAGTGTCTACTTCGAGTCTGATCGTATGTGTCCGCCCTCTAT
AGGAGGTGGCCATCTGTCTATACGTAAGATAACAGCATTTTGGTTTTGGG
GGGCGAGCGCCGGTTTTTTTTCTGTTATATACGTAAGTCATGGCGGAAGA
GCCAGCGCGGCTGACGTAAAAATCGTAACATATTGACACGCCCAATCACT
TGCTTACTGTAATACATTTCGGTCGTGGTGGAAGCAGAGATGACGCGGCT
TGAATATCATACCGCTTATGCCGTACCTCACCACTGAGAAGGTTTGAGGT
TTCATCGCCCCGTCCTCCATCCCAATTACTTTCCCAATGATCATGCGGGG
TTTTGACAGTTGCAGGCATGCCAGCGAAAGGGGCTCGTAGCTTTGGACAC
AGCGCGTGTAATCACGGCACGGCCTATCCCCCCTGGCGCATTACGGAAAC
CAGTCTGAACTGACTGGATGTTTTTTGCGAAGCATGTGTAGCGGAACACA
AGAATGAACACACATTTTGCCGGTCTGGTTGTCTTCGTCTGAGCACATGA
ATCAATTATATCTGGTAGTACTGTATCCTGGCTAAGCGATACACCTGCCA
GTACCACCGTGTTGCATTCAGCGCGATTTGTATGCAAGATAGCCGGGATT
CCTCGCGTGTCCCTGTACAGGTGTACATGGTGCCGTAACTTGTATTATTT
CTCTGTTGTTGTTGTTGTTGCTGCTCCTGTTGCGTTGTGGGTGCGTGTCA
ACCATTGTTGCTGCTGCTTTTAGTGTTCAGCACGGGGACTTTCCACGGAA
ATTTGTCGTTTTTGTGTGCGCGTATGGTATTACCTTTATCCTGCGGTATG
CCTTAAATTAGCAGACATGCTGTGTTGCTGCGGTTACAATGATTTCGTTT
TTGTTGTTGTGGGTGTAACTAGTCTAGCTCAGGTAGTGTAGCTATCTTTT
GCGACGCTTTCGTTGCCAGTCACACGTTTTATTTCGTTTGTGTGTGCGCA
TGATTGTTCCTGTATACAGGGACATGCCCATGTGGAGCCTCCATATTATC
GAGAACACGGGCACGGTGGAAGGTACGATCAACCAAACCCCCGACGCTTT
TCACCGCGGTACTGTTGTCTTCGAACACGGGCCGGCGTAGCATTTATCAT
AGTATAGCAGGGGAATGTTGGGCCGGGGGATGAATTGGACAAAAAGTAGT
CACTGTCCACTTTGGATACACCGACGGTTCGCGAGACGTAACGGCAGCGG
GCCCGGAAAGCGCAGCACAAACGCAGAGGTGGAGAAAATGACAAAATACC
TCCCGTCTGGCTCCCGACGGCTTGAGAATGGCGCGGCACGCTCAGCCAGA
CTGCACGGTGAAGCCTTCCGCGTGCACCCTTTATTGGTTCGAATATGTCA
TCAAATTTGGTGTGTGTGTCGATTGTGTTAGCATATGAACGTACGCCCCG
CCCCCCTCCCCCCTTCCTCTCACTCCTATTGGTTTGAATGTGCTCATAAA
TGAGCTCACAAGCAACACTTTTGTTTGAAGCACGCAGAAAAGTATTGGCG
CTTGGCGCAGCCTTTACAAAACAGCACTGCCGCTGCCATCCGACCTTGTT
GGAGAGTAGCACTACAATCACGAAAGAGTGCCCCCGAGGTGCCGCGCAGA
TTTTTATTGAACCTCTGCGGGCTGCCGTATATTCTTATGGTGTTGGCTGG
CGACTTGTGCTCATGCTGCGCACCAGGAAGGTTAATTCATCGGGGTGATT
GTCGCTTGTCTCATGATGCGCACTGTCGGTACAAGCATTCACGGTGTTCG
ACGGCACGTTTGGGTATGTGTTTTGTGGCCAAGACAGCAAAGAAGTGAGA
AGTAGCAGGGAATCCAAAGATTGCGAGCCGGTATTCTCTTGGATATCTGG
GCTAATACATAGGCGGTATGGATTGATTTTTTTAGTCCGTACTGCCTACA
CCCATTCTGTTTAATCCTCGATAACCCCGTCTTTGTGGTACCTACTCTAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCGCCCCCGACCCCCCCCCCCCCCCCCCCCCCCGCGCGCC
GGCGCGGCGGCGCCCCCCCCCGGGGCGGGGGGTTTTTGTTTTCTGNNNNN
NNNNNGGGGTTTTGTTTTTTTTTTTTTGGCCCCTCCTCCCCCCCCCCCTT
TTTTTTATCCCCCCCCACCCCCCCCTTTGTGTTCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCACTCCACATTCCGACAAACGCCTGCGTACCTTCGA
AAACGAGCAGCCGGCGTAGGTTGCGTGATCGCGCTGCGTGTGCATCACAC
CATTGGGGATGGCATGTCTCTCGTCGCCGTTGCGCAGAGCGTGCTAGAAG
CAGCTACCGGAGGGCCGATTGGGCAAGGAGGCGGGAACGGGGCCGGGACC
GGTGGCGCTTTGGCCAACGGCTGCAAGCCTGAAGGGAGGAATCTTTCCAA
CTTTAGTGTCGGCAAGGTG back to topCoding sequence (CDS) from alignment at D-dudresnayi_contig10359:319..4887- >mRNA_D-dudresnayi_contig10359.378.1 ID=mRNA_D-dudresnayi_contig10359.378.1|Name=mRNA_D-dudresnayi_contig10359.378.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1218bp|location=Sequence derived from alignment at D-dudresnayi_contig10359:319..4887- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGACCTTTACGAGCGGATACATGTCCGTTGGGTCGTGGCCCACAGACAT
CAAAATGTCCGATCCCGTCATCACGGCCTTCATATGACCTTTACGAGCGG
ATACATGTCCGTTGGGTCGTGGCCCACAGACATCAAAATGTCCGATCCCG
TCATCACGGCCTTCATGTTTTTCGACAGCGTGCCGCAGCAGGCGGCAGTG
GAGGAGGCGTGCTCTAAAATACTGCGCTACCACAACTTTCGTGGCGTGCC
CCGATGCCGGCGGTTGAGTTGGTTTCCTCCGTGGTTCTTCTCGCGTTTTG
AGTGGCACGACATTGAGGTTTTTCGACAGCGTGCCGCAGCAGGCGGCAGT
GGAGGAGGCGTGCTCTAAAATACTGCGCTACCACAACTTTCGTGGCGTGC
CCCGATGCCGGCGGTTGAGTTGGTTTCCTCCGTGGTTCTTCTCGCGTTTT
GAGTGGCACGACATTGAGGTTCGACCTGCTGACGTCATTACTCGGGTGCA
GGCGAATGGGTCGGCAGAGGTTCTTGTGGAGATGGACCGTGTCAAGGACG
CCCCCATCCCTCGAACCACGTCCGACGGAAGGTTCGACCTGCTGACGTCA
TTACTCGGGTGCAGGCGAATGGGTCGGCAGAGGTTCTTGTGGAGATGGAC
CGTGTCAAGGACGCCCCCATCCCTCGAACCACGTCCGACGGAAGGGACAT
GCCCATGTGGAGCCTCCATATTATCGAGAACACGGGCACGGTGGAAGGGA
CATGCCCATGTGGAGCCTCCATATTATCGAGAACACGGGCACGGTGGAAG
CCGGCGTAGGTTGCGTGATCGCGCTGCGTGTGCATCACACCATTGGGGAT
GGCATGTCTCTCGTCGCCGTTGCGCAGAGCGTGCTAGAAGCAGCTACCGG
AGGGCCGATTGGGCAAGGAGGCGGGAACGGGGCCGGGACCGGTGGCGCTT
TGGCCAACGGCTGCAAGCCTGAAGGGAGGAATCTTTCCAACTTTAGTGTC
GGCAAGGTGCCGGCGTAGGTTGCGTGATCGCGCTGCGTGTGCATCACACC
ATTGGGGATGGCATGTCTCTCGTCGCCGTTGCGCAGAGCGTGCTAGAAGC
AGCTACCGGAGGGCCGATTGGGCAAGGAGGCGGGAACGGGGCCGGGACCG
GTGGCGCTTTGGCCAACGGCTGCAAGCCTGAAGGGAGGAATCTTTCCAAC
TTTAGTGTCGGCAAGGTG back to top
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